RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000198258

Ensembl transcript IDs: ENST00000358666.7, ENST00000588141.1, ENST00000588595.5

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTGGCTGGGTCGCGACAGCTTTCTCCGACTCCGAGCCTCTCCGCTTaGCCCCCTCACCTCGAATCGCCTCGAACCTGCCGACGCCACCAG +
Preference number: 5 (lower is better)
Translates to: VAGSRQLSPTPSLSA*PPHLESPRTCRRHQ
Trigger: CTGGTGGCGTCGGCAGGTTCGAGGCGATTCGAGGTGAGGGGGTCAAGCGGAGAGGCTCGGAGTCGGAGAAAGCTGTCGCGACCCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358666.7
CDS GCA 90 bp AGATTGAGTTGCCTGCCTCACGCCAAGCACCCCTGCGGGTACCACTaGCTCTCGGCTGCCAGTGGATACTTGCATTTAACGCGGACCTTC +
Preference number: 5 (lower is better)
Translates to: RLSCLPHAKHPCGYH*LSAASGYLHLTRTF
Trigger: GAAGGTCCGCGTTAAATGCAAGTATCCACTGGCAGCCGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 90 bp GTCTGTAGGCCAAATGAGGTAGCCAAGCCTAAGCAAAGGGCTGCCTaGAGCGCTCCCCCAACCAAAACCTTCCGGCCTAGTCCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: VCRPNEVAKPKQRAA*SAPPTKTFRPSPVH
Trigger: GTGGACTGGACTAGGCCGGAAGGTTTTGGTTGGGGGAGCGCTGCAGGCAGCCCTTTGCTTAGGCTTGGCTACCTCATTTGGCCTACAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588595.5
CDS GCA 90 bp CCTCTCCCGGGTTTAACTAAAACCATCCGACAACACAGATTGAGTTaGCTGCCTCACGCCAAGCACCCCTGCGGGTACCACTGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: PLPGLTKTIRQHRLS*LPHAKHPCGYHCLS
Trigger: CGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCTGTGTTGTCGGATGGTTTTAGTTAAACCCGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 90 bp ATCCGACAACACAGATTGAGTTGCCTGCCTCACGCCAAGCACCCCTaGGGGTACCACTGCCTCTCGGCTGCCAGTGGATACTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: IRQHRLSCLPHAKHP*GYHCLSAASGYLHL
Trigger: TAAATGCAAGTATCCACTGGCAGCCGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCTGTGTTGTCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS CCA 72 bp AGCTGGAGCTCCCACCGACCCCAGACCCTGGGTGGCTaGGTCGCGACAGCTTTCTCCGACTCCGAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SWSSHRPQTLGG*VATAFSDSEPL
Trigger: GAGAGGCTCGGAGTCGGAGAAAGCTGTCGCGACCCAGCCACCCAGGGTCTGGGGTCGGTGGGAGCTCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358666.7
CDS CAA 90 bp GGTGGCTGGGTCGCGACAGCTTTCTCCGACTCCGAGCCTCTCCGCTaGACCCCCTCACCTCGAATCGCCTCGAACCTGCCGACGCCACCA +
Preference number: 6 (lower is better)
Translates to: GGWVATAFSDSEPLR*TPSPRIASNLPTPP
Trigger: TGGTGGCGTCGGCAGGTTCGAGGCGATTCGAGGTGAGGGGGTCAAGCGGAGAGGCTCGGAGTCGGAGAAAGCTGTCGCGACCCAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358666.7
CDS CAA 72 bp GTCGCGACAGCTTTCTCCGACTCCGAGCCTCTCCGCTaGACCCCCTCACCTCGAATCGCCTCGAACCTGCCG +
Preference number: 6 (lower is better)
Translates to: VATAFSDSEPLR*TPSPRIASNLP
Trigger: CGGCAGGTTCGAGGCGATTCGAGGTGAGGGGGTCAAGCGGAGAGGCTCGGAGTCGGAGAAAGCTGTCGCGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358666.7
CDS TCA 72 bp TCGCGACAGCTTTCTCCGACTCCGAGCCTCTCCGCTTaGCCCCCTCACCTCGAATCGCCTCGAACCTGCCGA +
Preference number: 6 (lower is better)
Translates to: SRQLSPTPSLSA*PPHLESPRTCR
Trigger: TCGGCAGGTTCGAGGCGATTCGAGGTGAGGGGGTCAAGCGGAGAGGCTCGGAGTCGGAGAAAGCTGTCGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358666.7
CDS GCA 72 bp CACAGATTGAGTTGCCTGCCTCACGCCAAGCACCCCTaGGGGTACCACTGCCTCTCGGCTGCCAGTGGATAC +
Preference number: 6 (lower is better)
Translates to: HRLSCLPHAKHP*GYHCLSAASGY
Trigger: GTATCCACTGGCAGCCGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 72 bp TGCCTGCCTCACGCCAAGCACCCCTGCGGGTACCACTaGCTCTCGGCTGCCAGTGGATACTTGCATTTAACG +
Preference number: 6 (lower is better)
Translates to: CLPHAKHPCGYH*LSAASGYLHLT
Trigger: CGTTAAATGCAAGTATCCACTGGCAGCCGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 72 bp CGCCAAGCACCCCTGCGGGTACCACTGCCTCTCGGCTaGCAGTGGATACTTGCATTTAACGCGGACCTTCTT +
Preference number: 6 (lower is better)
Translates to: RQAPLRVPLPLG*QWILAFNADLL
Trigger: AAGAAGGTCCGCGTTAAATGCAAGTATCCACTGGCAGCCGAGAGGCAGTGGTACCCGCAGGGGTGCTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 72 bp CCAAATGAGGTAGCCAAGCCTAAGCAAAGGGCTGCCTaGAGCGCTCCCCCAACCAAAACCTTCCGGCCTAGT +
Preference number: 6 (lower is better)
Translates to: PNEVAKPKQRAA*SAPPTKTFRPS
Trigger: ACTAGGCCGGAAGGTTTTGGTTGGGGGAGCGCTGCAGGCAGCCCTTTGCTTAGGCTTGGCTACCTCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588595.5
CDS CAA 72 bp CTCCCGGGTTTAACTAAAACCATCCGACAACACAGATaGAGTTGCCTGCCTCACGCCAAGCACCCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: LPGLTKTIRQHR*SCLPHAKHPCG
Trigger: CCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCTGTGTTGTCGGATGGTTTTAGTTAAACCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5
CDS GCA 72 bp GGTTTAACTAAAACCATCCGACAACACAGATTGAGTTaGCTGCCTCACGCCAAGCACCCCTGCGGGTACCAC +
Preference number: 6 (lower is better)
Translates to: GLTKTIRQHRLS*LPHAKHPCGYH
Trigger: GTGGTACCCGCAGGGGTGCTTGGCGTGAGGCAGGCAACTCAATCTGTGTTGTCGGATGGTTTTAGTTAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588141.1
ENST00000588595.5