RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2R2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107341

Ensembl transcript IDs: ENST00000263228.4

Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCAATAGGGCCTaGTGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: RSGSLSQCLTEANRA*WNSCAAEHLPQCQG
Trigger: ACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCATCAGGCCCTATTGGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 90 bp ACCTACTCTGGCCATCCTAGGATCCCTCCTGCCCCGTCCCTAATCTaGCCTTTGGTTCTTTCTGAGTTACGAGCCAAAGGAGGAGTTGAC +
Preference number: 1 (lower is better)
Translates to: TYSGHPRIPPAPSLI*PLVLSELRAKGGVD
Trigger: GTCAACTCCTCCTTTGGCTCGTAACTCAGAAAGAACCAAAGGGCAGATTAGGGACGGGGCAGGAGGGATCCTAGGATGGCCAGAGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 90 bp CAGTCCCATTTCATACCAGACCAAACTTTAGAGGCTGGGAAGGGCTaGTGGGACCAAACTTTAGAGGCCGGGAAGGGCTGCTGGGAAGAA +
Preference number: 1 (lower is better)
Translates to: QSHFIPDQTLEAGKG*WDQTLEAGKGCWEE
Trigger: TTCTTCCCAGCAGCCCTTCCCGGCCTCTAAAGTTTGGTCCCAGCAGCCCTTCCCAGCCTCTAAAGTTTGGTCTGGTATGAAATGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 90 bp ACTAAAATCACTAGATTCTGGGTGCAAGTAGCAACCCTGGCCCTGTaGAGATCACAGATTCTGGGACCAGGCTCAACAGTGTCCCCTAAG +
Preference number: 1 (lower is better)
Translates to: TKITRFWVQVATLAL*RSQILGPGSTVSPK
Trigger: CTTAGGGGACACTGTTGAGCCTGGTCCCAGAATCTGTGATCTCCACAGGGCCAGGGTTGCTACTTGCACCCAGAATCTAGTGATTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 90 bp AATCAAAGCTGCAGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTaGCCTAAAAACTGCCTGCAGTCAACTCCCTCAGCCCTGCCACAA +
Preference number: 1 (lower is better)
Translates to: NQSCSKCIAGRSSLI*PKNCLQSTPSALPQ
Trigger: TTGTGGCAGGGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCTGCAGCTTTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTaGCTGCAGTCAACTCCCTCAGCCCTGCCACAATTTCTATGCATA +
Preference number: 1 (lower is better)
Translates to: SKCIAGRSSLIWPKN*LQSTPSALPQFLCI
Trigger: TATGCATAGAAATTGTGGCAGGGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 90 bp TGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAAGTCCCTaGTGCCCACCATGTCCCAGCCTTAGGAAAGGAAAGAAACAGAAT +
Preference number: 1 (lower is better)
Translates to: WRLKEHISSGLAQSP*CPPCPSLRKGKKQN
Trigger: ATTCTGTTTCTTTCCTTTCCTAAGGCTGGGACATGGTGGGCATCAGGGACTTTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 90 bp AAAAACTGCCTGCAGTCAACTCCCTCAGCCCTGCCACAATTTCTATaGATAATTCTGCTTGCACTCCACAGCCTAAGTATGTTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: KNCLQSTPSALPQFL*IILLALHSLSMLKG
Trigger: TCCTTTCAACATACTTAGGCTGTGGAGTGCAAGCAGAATTATGCATAGAAATTGTGGCAGGGCTGAGGGAGTTGACTGCAGGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 90 bp GGGGAGGTAAATCAGCACTGTGAGAGGCTTTGGCTCCACAAGATTTaGAGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAA +
Preference number: 1 (lower is better)
Translates to: GEVNQHCERLWLHKI*RLIWKHYLQSMGSK
Trigger: TTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCAAAGCCTCTCACAGTGCTGATTTACCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 90 bp TTTGAGTTCATGTCACATCAAATAATAAGCAAAACTGTACGTACATaGTTCCGGATTGAGCCTGAGACCTCCACTCCCAGAAGGGGGAAA +
Preference number: 1 (lower is better)
Translates to: FEFMSHQIISKTVRT*FRIEPETSTPRRGK
Trigger: TTTCCCCCTTCTGGGAGTGGAGGTCTCAGGCTCAATCCGGAACCATGTACGTACAGTTTTGCTTATTATTTGATGTGACATGAACTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 90 bp CAGCACTGTGAGAGGCTTTGGCTCCACAAGATTTGCAGGTTAATCTaGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCA +
Preference number: 1 (lower is better)
Translates to: QHCERLWLHKICRLI*KHYLQSMGSKKVVP
Trigger: TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCAAAGCCTCTCACAGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 90 bp AGCAGAATCATATACTTCTCCACCCAGCCTCAAAATACACAGAACTaGAGAGCATCTAGTGAGGCCTCAATTAGAACTAAAAGGAATCTA +
Preference number: 1 (lower is better)
Translates to: SRIIYFSTQPQNTQN*RASSEASIRTKRNL
Trigger: TAGATTCCTTTTAGTTCTAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGGAGAAGTATATGATTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 90 bp AAAAAGGTAGTTCCAACATCTATGAGAGTTTGTAATCAGGTAACTTaGCAATGTATTACGAAGCTGCTCTGTTCCATGGATCTGACTAAA +
Preference number: 1 (lower is better)
Translates to: KKVVPTSMRVCNQVT*QCITKLLCSMDLTK
Trigger: TTTAGTCAGATCCATGGAACAGAGCAGCTTCGTAATACATTGTCAAGTTACCTGATTACAAACTCTCATAGATGTTGGAACTACCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCGAGGCCGGGAAGGGCTaGTGGGAAGAAGTCATGTGT +
Preference number: 2 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAAEAGKG*WEEVMC
Trigger: ACACATGACTTCTTCCCAGCAGCCCTTCCCGGCCTC...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCGAGGCTGGGAAGGGCTaGTGGGACCAAACTTTAGAG +
Preference number: 2 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAAEAGKG*WDQTLE
Trigger: CTCTAAAGTTTGGTCCCAGCAGCCCTTCCCAGCCTC...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCTTCCTCTCCCAACAGTaGTCACCAGTAGTTTCAACT +
Preference number: 2 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAAFLSQQ*SPVVST
Trigger: AGTTGAAACTACTGGTGACCACTGTTGGGAGAGGAA...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGGGCTGCCCTGGGAGTaGGATGCTTTAGCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLGLPWE*DALAKG
Trigger: CCCCTTTGCTAAAGCATCTCACTCCCAGGGCAGCCC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAGGCCAGGTCCCCACTTaGTCCCCTCCCTTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLGQVPT*SPPFGL
Trigger: CAGGCCAAAGGGAGGGGAGCAAGTGGGGACCTGGCC...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CAA 90 bp TCTGGCCATCCTAGGATCCCTCCTGCCCCGTCCCTAATCTGCCCTTaGGTTCTTTCTGAGTTACGAGCCAAAGGAGGAGTTGACACTAGT +
Preference number: 2 (lower is better)
Translates to: SGHPRIPPAPSLICP*VLSELRAKGGVDTS
Trigger: ACTAGTGTCAACTCCTCCTTTGGCTCGTAACTCAGAAAGAACCAAAGGGCAGATTAGGGACGGGGCAGGAGGGATCCTAGGATGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGTTAGCACAAAGTCCCTaGTGCCCACCATGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLLAQSP*CPPCPS
Trigger: GCTGGGACATGGTGGGCATCAGGGACTTTGTGCTAA...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTATTTGCTGAGGGGCCATaGCCAGGTCCCCACTTGCTC +
Preference number: 2 (lower is better)
Translates to: QNVHLLARDLPSLLELIVFAEGP*PGPHLL
Trigger: GAGCAAGTGGGGACCTGGCCATGGCCCCTCAGCAAA...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATGGTACAACCTCCACTTaGCGCTCCGGCTCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: RALEPASGFRSVSLKYQNGTTST*RSGSLS
Trigger: ACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGAAGTCTCCTGGATGGTaGAGGCTGCTGGATCTCAAT +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLKSPGW*RLLDLN
Trigger: ATTGAGATCCAGCAGCCTTCACCATCCAGGAGACTT...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp GGTACAACCTCCACTTGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCTGTAATCAGGTAACTTaGCAATGTATTACGAAGCTG +
Preference number: 2 (lower is better)
Translates to: GTTSTWRSGSLSQCLTEACNQVT*QCITKL
Trigger: CAGCTTCGTAATACATTGTCAAGTTACCTGATTACA...GGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAGGCCTAAAAACTGCCTaGAGTCAACTCCCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLGLKTA*SQLPQP
Trigger: GGGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCC...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAACCCTTTGGCCTGAGATaGCAGGGCAGTACAGGGGCA +
Preference number: 2 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQPFGLR*QGSTGA
Trigger: TGCCCCTGTACTGCCCTGCCATCTCAGGCCAAAGGG...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CAA 90 bp CAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTaGACACTTTTAACACCCCAAAGGGCTGAAAGGTACAACCTCCAC +
Preference number: 2 (lower is better)
Translates to: QSSGTDCTHQRQTQP*TLLTPQRAERYNLH
Trigger: GTGGAGGTTGTACCTTTCAGCCCTTTGGGGTGTTAAAAGTGTCAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp AAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGGCTTGCCCCACTCCCTaGGGGGAAATAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: KKAVTRLTHIQVFHYQYKACPTP*GEITLP
Trigger: AGGCAGGGTTATTTCCCCCCAGGGAGTGGGGCAAGC...CTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGACCCTGAGATCAGAATaGAAGGAGGAGCTAAGGAAG +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLTLRSE*KEELRK
Trigger: CTTCCTTAGCTCCTCCTTCCATTCTGATCTCAGGGT...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTAGGAGATCACAGATTCTaGGACCAGGCTCAACAGTGT +
Preference number: 2 (lower is better)
Translates to: QNVHLLARDLPSLLELIVGDHRF*DQAQQC
Trigger: ACACTGTTGAGCCTGGTCCCAGAATCTGTGATCTCC...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp ATCACATCCAATGAAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCATCTGTAGAGACGAAGTaGGGCGGGAGTTTGGGTTCA +
Preference number: 2 (lower is better)
Translates to: ITSNEEGGNSSHTHPSFSSVETK*GGSLGS
Trigger: TGAACCCAAACTCCCGCCTCACTTCGTCTCTACAGA...TGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTTCATTGGATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTTCACCACCATGGGGCTaGACGAATGCACACACACTA +
Preference number: 2 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPSPPWG*TNAHTL
Trigger: TAGTGTGTGTGCATTCGTTCAGCCCCATGGTGGTGA...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGTACGAGTGTATTTTTaGTGGGAAGGCCATGCTAAA +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLVRVYF*WEGHAK
Trigger: TTTAGCATGGCCTTCCCATCAAAAATACACTCGTAC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAATCTGGCCTAAAAACTaGCTGCAGTCAACTCCCTCA +
Preference number: 2 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLIWPKN*LQSTPS
Trigger: TGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGAT...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGCTGGATGGTGAAGGCTaGTGGATCTCAATATTGATT +
Preference number: 2 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLLDGEG*WISILI
Trigger: AATCAATATTGAGATCCAGCAGCCTTCACCATCCAG...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTACCTCCTATGATCTGGTaGACCCCCATAACAACCAAA +
Preference number: 2 (lower is better)
Translates to: QNVHLLARDLPSLLELIVPPMIW*TPITTK
Trigger: TTTGGTTGTTATGGGGGTGCACCAGATCATAGGAGG...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGTGGTTTCATGGAGATTaGAGGAGCACATTTCATCAG +
Preference number: 2 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQWFHGD*RSTFHQ
Trigger: CTGATGAAATGTGCTCCTTCAATCTCCATGAAACCA...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGCCAGTCTTCTGGAACTaGTTGTACTCATCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWPVFWN*LYSSEA
Trigger: TGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGG...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGCAAAGCTGCAGCAAGTaGATTGCAGGAAGATCTAGC +
Preference number: 2 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWQSCSK*IAGRSS
Trigger: GCTAGATCTTCCTGCAATGCACTTGCTGCAGCTTTG...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGACAGTCAGTCCTTGCTaGATTTTCCTTCTGAAATCT +
Preference number: 2 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLTVSPC*IFLLKS
Trigger: AGATTTCAGAAGGAAAATGCAGCAAGGACTGACTGT...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGGATGGTGAAGGCTGCTaGATCTCAATATTGATTGAA +
Preference number: 2 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLDGEGC*ISILIE
Trigger: TTCAATCAATATTGAGATCCAGCAGCCTTCACCATC...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGATCTCAATATTGATTaGAGCAACACGATTGAGATC +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLDLNID*SNTIEI
Trigger: GATCTCAATCGTGTTGCTTCAATCAATATTGAGATC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGTCTGTTCCATGGATCTaGCTAAAATCACTAGATTCT +
Preference number: 2 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLSVPWI*LKSLDS
Trigger: AGAATCTAGTGATTTTAGTCAGATCCATGGAACAGA...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp GCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGCTCTTGCTACCCAGTATATaGAGCACTTGTGAACTCCCA +
Preference number: 2 (lower is better)
Translates to: AVTRLTHIQVFHYQYKQLLLPSI*STCELP
Trigger: TGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAA...GAGCTGCTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGAATTCAGACATTCTGTaGAGGGTTACTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: CAPNVRKPASKEAICQGKNSDIL*RVTLSP
Trigger: TGGAGAGAGAGTAACCCTCCACAGAATGTCTGAATT...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATAGACCAAACGTGTTTTaGTGTGAACATTCTGTAGAG +
Preference number: 2 (lower is better)
Translates to: RALEPASGFRSVSLKYQNRPNVF*CEHSVE
Trigger: CTCTACAGAATGTTCACAGCAAAACACGTTTGGTCT...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATATGGGGCTGAACGAATaGACACACACTAATGTAAAT +
Preference number: 2 (lower is better)
Translates to: RALEPASGFRSVSLKYQNMGLNE*THTNVN
Trigger: ATTTACATTAGTGTGTGTGCATTCGTTCAGCCCCAT...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGATGCATAATTCTGCTTaGACTCCACAGCCTAAGTAT +
Preference number: 2 (lower is better)
Translates to: CAPNVRKPASKEAICQGKMHNSA*TPQPKY
Trigger: ATACTTAGGCTGTGGAGTGCAAGCAGAATTATGCAT...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAAAAAATCACTAGATTCTaGGTGCAAGTAGCAACCCTG +
Preference number: 2 (lower is better)
Translates to: YKLKYFPQGCVLRDRALEKITRF*VQVATL
Trigger: CAGGGTTGCTACTTGCACCCAGAATCTAGTGATTTT...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGTTGAAGCAACACGATTaGGATCTGGAAAATCAAAGC +
Preference number: 2 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWLKQHD*DLENQS
Trigger: GCTTTGATTTTCCAGATCTCAATCGTGTTGCTTCAA...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAAAACGTGTTTTGCTGTaGACATTCTGTAGAGACGAA +
Preference number: 2 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQKRVLL*TFCRDE
Trigger: TTCGTCTCTACAGAATGTTCACAGCAAAACACGTTT...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR TCA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCATATATGCAGCACTTGTaGACTCCCAACAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPYMQHL*TPNRFP
Trigger: TGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATA...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CCA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCAAACACGATTGAGATCTaGAAAATCAAAGCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPNTIEI*KIKAAA
Trigger: TGCTGCAGCTTTGATTTTCCAGATCTCAATCGTGTT...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR GCA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCATGGAAGGGTAAAGAATaGAAGAATTCAGACATTCTG +
Preference number: 2 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPWKGKE*KNSDIL
Trigger: CAGAATGTCTGAATTCTTGCATTCTTTACCCTTCCA...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCTTGGCTCCACAAGATTaGCAGGTTAATCTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAALAPQD*QVNLEA
Trigger: TGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCAA...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 72 bp AACCCAGCCCTTGACACTTTTAACACCCCAAAGGGCTaGAAGGTACAACCTCCACTTGGCGCTCCGGCTCCC +
Preference number: 3 (lower is better)
Translates to: NPALDTFNTPKG*KVQPPLGAPAP
Trigger: GGGAGCCGGAGCGCCAAGTGGAGGTTGTACCTTTCAGCCCTTTGGGGTGTTAAAAGTGTCAAGGGCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAAGGTACAACCTCCACTaGGCGCTCCGGCTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLRYNLH*ALRLPE
Trigger: CTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACCT...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 72 bp TGCAGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTaGCCTAAAAACTGCCTGCAGTCAACTCCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: CSKCIAGRSSLI*PKNCLQSTPSA
Trigger: GGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCAGTGATTTTTAACTCTTaGCTCCCACACGCACTCATC +
Preference number: 3 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAVIFNS*LPHALI
Trigger: GATGAGTGCGTGTGGGAGCAAAGAGTTAAAAATCAC...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 72 bp ATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTaGCTGCAGTCAACTCCCTCAGCCCTGCCACAATTT +
Preference number: 3 (lower is better)
Translates to: IAGRSSLIWPKN*LQSTPSALPQF
Trigger: AAATTGTGGCAGGGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCATGCTGGATCTCAATATaGATTGAAGCAACACGATTG +
Preference number: 3 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAACWISI*IEATRL
Trigger: CAATCGTGTTGCTTCAATCAATATTGAGATCCAGCA...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGTCCCTAATCTGCCCTTaGGTTCTTTCTGAGTTACGA +
Preference number: 3 (lower is better)
Translates to: CAPNVRKPASKEAICQGKSLICP*VLSELR
Trigger: TCGTAACTCAGAAAGAACCAAAGGGCAGATTAGGGA...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 72 bp ATGTCACATCAAATAATAAGCAAAACTGTACGTACATaGTTCCGGATTGAGCCTGAGACCTCCACTCCCAGA +
Preference number: 3 (lower is better)
Translates to: MSHQIISKTVRT*FRIEPETSTPR
Trigger: TCTGGGAGTGGAGGTCTCAGGCTCAATCCGGAACCATGTACGTACAGTTTTGCTTATTATTTGATGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 72 bp CTCAGCCCTGCCACAATTTCTATGCATAATTCTGCTTaGACTCCACAGCCTAAGTATGTTGAAAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: LSPATISMHNSA*TPQPKYVERRK
Trigger: TTTTCTCCTTTCAACATACTTAGGCTGTGGAGTGCAAGCAGAATTATGCATAGAAATTGTGGCAGGGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAATTGAAGCAACACGATaGAGATCTGGAAAATCAAAG +
Preference number: 3 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLIEATR*RSGKSK
Trigger: CTTTGATTTTCCAGATCTCAATCGTGTTGCTTCAAT...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 72 bp CCATTTTCTTTTGCTACCCAGTATATGCAGCACTTGTaGACTCCCAACAGGTTCCCAGCTTTAAACACATTA +
Preference number: 3 (lower is better)
Translates to: PFSFATQYMQHL*TPNRFPALNTL
Trigger: TAATGTGTTTAAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAAGAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR GCA 72 bp AATCAGCACTGTGAGAGGCTTTGGCTCCACAAGATTTaGAGGTTAATCTGGAAGCATTACTTACAAAGTATG +
Preference number: 3 (lower is better)
Translates to: NQHCERLWLHKI*RLIWKHYLQSM
Trigger: CATACTTTGTAAGTAATGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCAAAGCCTCTCACAGTGCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CCA 72 bp TGGAAGGGTAAAGAATGCAAGAATTCAGACATTCTGTaGAGGGTTACTCTCTCTCCATTAAAGGTCCATAAA +
Preference number: 3 (lower is better)
Translates to: WKGKECKNSDIL*RVTLSPLKVHK
Trigger: TTTATGGACCTTTAATGGAGAGAGAGTAACCCTCCACAGAATGTCTGAATTCTTGCATTCTTTACCCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR-3UTR CAA 90 bp AAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGTTTTTCCATTTTCTTTaGCTACCCAGTATATGCAGC +
Preference number: 3 (lower is better)
Translates to: KKAVTRLTHIQVFHYQYKFFHFL*LPSICS
Trigger: GCTGCATATACTGGGTAGCAAAAGAAAATGGAAAAA...CTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR TCA 72 bp GTTCCAACATCTATGAGAGTTTGTAATCAGGTAACTTaGCAATGTATTACGAAGCTGCTCTGTTCCATGGAT +
Preference number: 3 (lower is better)
Translates to: VPTSMRVCNQVT*QCITKLLCSMD
Trigger: ATCCATGGAACAGAGCAGCTTCGTAATACATTGTCAAGTTACCTGATTACAAACTCTCATAGATGTTGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCTCCACCGGTTCCTCCTaGAGGGATTTCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAASTGSS*RDFSSS
Trigger: GCTCGAGCTGAAATCCCTGCAGGAGGAACCGGTGGA...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCAAGTCTCCTGGATGGTaGAGGCTGCTGGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAAKSPGW*RLLDLN
Trigger: ATTGAGATCCAGCAGCCTTCACCATCCAGGAGACTT...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCTTTCCTGAACATAACTaGAGCATCGACATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAAFPEHN*SIDIGW
Trigger: CCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAAA...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGGAGCTGGTCATCTGCTaGTGGGCCATCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLELVIC*WAIAAA
Trigger: CGCCGCCGCGATGGCCCAGCAGCAGATGACCAGCTC...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCATGCGAGCTGGTCATCTaGTGCTGGGCCATCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAACELVI*CWAIAA
Trigger: CGCCGCGATGGCCCAGCAGCAGATGACCAGCTCGCA...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTACTGGTCATCTGCTGCTaGGCCATCGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QNVHLLARDLPSLLELIVLVICC*AIAAAA
Trigger: CGCCGCCGCCGCGATGGCCCAGCAGCAGATGACCAG...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TGGAACAGCTGTGCAGCAGAGCACCTCCCGCAATGCCAGGGTGCTGGGGCTGCCAATTCAGACATTCTGTaGAGGGTTACTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WNSCAAEHLPQCQGAGAANSDIL*RVTLSP
Trigger: TGGAGAGAGAGTAACCCTCCACAGAATGTCTGAATT...GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTCTGCTGCACAGCTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGCAATGCCAGGGTGCTaGGGCTGCCCTGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLAMPGC*GCPGSE
Trigger: CTCACTCCCAGGGCAGCCCCAGCACCCTGGCATTGC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGCCAGGGTGCTGGGGCTaGCCTGGGAGTGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLPGCWG*PGSEML
Trigger: AAGCATCTCACTCCCAGGGCAGCCCCAGCACCCTGG...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTACCCGCAATGCCAGGGTaGTGGGGCTGCCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLPAMPG*WGCPGS
Trigger: ACTCCCAGGGCAGCCCCAGCACCCTGGCATTGCGGG...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATGAGCACCTCCCGCAATaGCAGGGTGCTGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RALEPASGFRSVSLKYQNEHLPQ*QGAGAA
Trigger: GGCAGCCCCAGCACCCTGGCATTGCGGGAGGTGCTC...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCACCCTTTGGCCTGAGATaGCAGGGCAGTACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAPFGLR*QGSTGA
Trigger: TGCCCCTGTACTGCCCTGCCATCTCAGGCCAAAGGG...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GGTACAACCTCCACTTGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCACCCTGAGATCAGAATaGAAGGAGGAGCTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTTSTWRSGSLSQCLTEATLRSE*KEELRK
Trigger: CTTCCTTAGCTCCTCCTTCCATTCTGATCTCAGGGT...GGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGAGGCCAATAGGGCCTaGTGGAACAGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLEANRA*WNSCAA
Trigger: TGCTGCACAGCTGTTCCATCAGGCCCTATTGGCCTC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGCTGATGGAACAGCTGTaGAGCAGAGCACCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLLMEQL*SRAPPA
Trigger: TGCGGGAGGTGCTCTGCTGCACAGCTGTTCCATCAG...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CAA 72 bp TTAACACCCCAAAGGGCTGAAAGGTACAACCTCCACTaGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGA +
Preference number: 4 (lower is better)
Translates to: LTPQRAERYNLH*ALRLPESMSNR
Trigger: TCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACCTTTCAGCCCTTTGGGGTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGGCCTAAAAACTGCCTaGAGTCAACTCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLGLKTA*SQLPQP
Trigger: GGGCTGAGGGAGTTGACTGCAGGCAGTTTTTAGGCC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GGTACAACCTCCACTTGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCCTGGATGGTGAAGGCTaGTGGATCTCAATATTGATT +
Preference number: 4 (lower is better)
Translates to: GTTSTWRSGSLSQCLTEALDGEG*WISILI
Trigger: AATCAATATTGAGATCCAGCAGCCTTCACCATCCAG...GGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGGCCGGGAAGGGCTGCTaGGAAGAAGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLAGKGC*EEVMCL
Trigger: CAAACACATGACTTCTTCCCAGCAGCCCTTCCCGGC...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGGCTGGGAAGGGCTGCTaGGACCAAACTTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQAGKGC*DQTLEA
Trigger: GGCCTCTAAAGTTTGGTCCCAGCAGCCCTTCCCAGC...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTAGGTACAACCTCCACTTaGCGCTCCGGCTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QNVHLLARDLPSLLELIVGTTST*RSGSLS
Trigger: ACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGCTCGCAGTACAGGGGCACTaGAGGAGCACGTCACGACTC +
Preference number: 4 (lower is better)
Translates to: AVTRLTHIQVFHYQYKQLAVQGH*RSTSRL
Trigger: GAGTCGTGACGTGCTCCTTCAGTGCCCCTGTACTGC...GAGCTGCTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATAGCATCAGGGCCTTCTaGGAGCTGGTCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RALEPASGFRSVSLKYQNSIRAF*ELVICC
Trigger: GCAGCAGATGACCAGCTCGCAGAAGGCCCTGATGCT...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GGTACAACCTCCACTTGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCACTACAGTCAGTCCTTaGTGCATTTTCCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GTTSTWRSGSLSQCLTEATTVSP*CIFLLK
Trigger: TTTCAGAAGGAAAATGCAGCAAGGACTGACTGTAGT...GGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTATTAGCACAAAGTCCCTaGTGCCCACCATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLLAQSP*CPPCPS
Trigger: GCTGGGACATGGTGGGCATCAGGGACTTTGTGCTAA...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTGGGCTGCCCTGGGAGTaGGATGCTTTAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPGLPWE*DALAKG
Trigger: CCCCTTTGCTAAAGCATCTCACTCCCAGGGCAGCCC...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTAGAGGCTGGGAAGGGCTaGTGGGACCAAACTTTAGAG +
Preference number: 4 (lower is better)
Translates to: QNVHLLARDLPSLLELIVEAGKG*WDQTLE
Trigger: CTCTAAAGTTTGGTCCCAGCAGCCCTTCCCAGCCTC...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAATTCCGCCAGGGTTGTaGGGACCTTCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLIPPGL*GPSLHP
Trigger: AGGATGGAGTGAAGGTCCCCACAACCCTGGCGGAAT...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCAGTCGTAAAGCAAATCTaGGCTGTTGTCATTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAVVKQI*AVVIGR
Trigger: CCTTCCAATGACAACAGCTCAGATTTGCTTTACGAC...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGTATATGCAGCACTTGTaGACTCCCAACAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLYMQHL*TPNRFP
Trigger: TGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATA...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGTCACCACCATGGGGCTaGACGAATGCACACACACTA +
Preference number: 4 (lower is better)
Translates to: CAPNVRKPASKEAICQGKSPPWG*TNAHTL
Trigger: TAGTGTGTGTGCATTCGTTCAGCCCCATGGTGGTGA...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGCCTCCTATGATCTGGTaGACCCCCATAACAACCAAA +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLPPMIW*TPITTK
Trigger: TTTGGTTGTTATGGGGGTGCACCAGATCATAGGAGG...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAGAGGCCGGGAAGGGCTaGTGGGAAGAAGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQEAGKG*WEEVMC
Trigger: ACACATGACTTCTTCCCAGCAGCCCTTCCCGGCCTC...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGTTTGCTGAGGGGCCATaGCCAGGTCCCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: KKAVTRLTHIQVFHYQYKFAEGP*PGPHLL
Trigger: GAGCAAGTGGGGACCTGGCCATGGCCCCTCAGCAAA...CTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGGGAGATCACAGATTCTaGGACCAGGCTCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQGDHRF*DQAQQC
Trigger: ACACTGTTGAGCCTGGTCCCAGAATCTGTGATCTCC...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCATTTGTTTTATCAGGATaGGAGGGGTGGAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAFVLSG*EGWRVP
Trigger: AGGAACTCTCCACCCCTCCCATCCTGATAAAACAAA...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CAA 72 bp GGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTaGACACTTTTAACACCCCAAAGGGCTGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GTDCTHQRQTQP*TLLTPQRAERY
Trigger: GTACCTTTCAGCCCTTTGGGGTGTTAAAAGTGTCAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGTCTGTAGAGACGAAGTaGGGCGGGAGTTTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWSVETK*GGSLGS
Trigger: TGAACCCAAACTCCCGCCTCACTTCGTCTCTACAGA...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAAGCATCGACATTGGCTaGGGAGAAGGTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQSIDIG*GEGVGL
Trigger: GAGCCCAACACCTTCTCCCCAGCCAATGTCGATGCT...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAATGCCCTCCTATGATCTaGTGCACCCCCATAACAACC +
Preference number: 4 (lower is better)
Translates to: YKLKYFPQGCVLRDRALECPPMI*CTPITT
Trigger: GGTTGTTATGGGGGTGCACCAGATCATAGGAGGGCA...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGATAGTCCTCACATTCTaGGTAGGATTCCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLIVLTF*VGFHLS
Trigger: TGAAAGGTGGAATCCTACTCAGAATGTGAGGACTAT...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCAAAACGTGTTTTGCTGTaGACATTCTGTAGAGACGAA +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAKRVLL*TFCRDE
Trigger: TTCGTCTCTACAGAATGTTCACAGCAAAACACGTTT...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGGTACGAGTGTATTTTTaGTGGGAAGGCCATGCTAAA +
Preference number: 4 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLVRVYF*WEGHAK
Trigger: TTTAGCATGGCCTTCCCATCAAAAATACACTCGTAC...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGATCTGGCCTAAAAACTaGCTGCAGTCAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CAPNVRKPASKEAICQGKIWPKN*LQSTPS
Trigger: TGAGGGAGTTGACTGCAGGCAGTTTTTAGGCCAGAT...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTCAAAGCTGCAGCAAGTaGATTGCAGGAAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFQSCSK*IAGRSS
Trigger: GCTAGATCTTCCTGCAATGCACTTGCTGCAGCTTTG...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCAGCTTGCCCCACTCCCTaGGGGGAAATAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPACPTP*GEITLP
Trigger: AGGCAGGGTTATTTCCCCCCAGGGAGTGGGGCAAGC...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCAGATGGTGAAGGCTGCTaGATCTCAATATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAADGEGC*ISILIE
Trigger: TTCAATCAATATTGAGATCCAGCAGCCTTCACCATC...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp GCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGCTCTCTGGAACCAGCCTCTaGGTTTCGTTCAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: AVTRLTHIQVFHYQYKQLSGTSL*VSFSQS
Trigger: AGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGA...GAGCTGCTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGCTCCCAGTCTTCTGGAACTaGTTGTACTCATCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AVTRLTHIQVFHYQYKQLPVFWN*LYSSEA
Trigger: TGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGG...GAGCTGCTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTACAAAATACACAGAACTaGAGAGCATCTAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLQNTQN*RASSEA
Trigger: GGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTG...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGACAGTCAGTCCTTGCTaGATTTTCCTTCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLTVSPC*IFLLKS
Trigger: AGATTTCAGAAGGAAAATGCAGCAAGGACTGACTGT...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGTTCTCCACTCTGTaGGTCATCTACAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: KKAVTRLTHIQVFHYQYKQFSTL*VIYRRM
Trigger: CATCCGCCTGTAGATGACCCACAGAGTGGAGAACTG...CTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGTTACGATGGTTTCATaGAGATTGAAGGAGCACATT +
Preference number: 4 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLVTMVS*RLKEHI
Trigger: AATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTTTCCTCTCCCAACAGTaGTCACCAGTAGTTTCAACT +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFFLSQQ*SPVVST
Trigger: AGTTGAAACTACTGGTGACCACTGTTGGGAGAGGAA...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTAGATCTAGCCTTATCTaGCCTAAAAACTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFRSSLI*PKNCLQ
Trigger: CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCT...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTAAAACTGTACGTACATaGTTCCGGATTGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFKTVRT*FRIEPE
Trigger: CTCAGGCTCAATCCGGAACCATGTACGTACAGTTTT...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTTCTGAAGGTAGGTGGTaGATAGGGGTAGTCAATAGG +
Preference number: 4 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPSEGRW*IGVVNR
Trigger: CCTATTGACTACCCCTATTCACCACCTACCTTCAGA...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTTGGTTTCATGGAGATTaGAGGAGCACATTTCATCAG +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFWFHGD*RSTFHQ
Trigger: CTGATGAAATGTGCTCCTTCAATCTCCATGAAACCA...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGTTGAAGCAACACGATTaGGATCTGGAAAATCAAAGC +
Preference number: 4 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQLKQHD*DLENQS
Trigger: GCTTTGATTTTCCAGATCTCAATCGTGTTGCTTCAA...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp AAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGAACACCCCAAAGGGCTaGAAGGTACAACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: KKAVTRLTHIQVFHYQYKNTPKG*KVQPPL
Trigger: AAGTGGAGGTTGTACCTTTCAGCCCTTTGGGGTGTT...CTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAATTGCTACCCAGTATATaGAGCACTTGTGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: YKLKYFPQGCVLRDRALELLPSI*STCELP
Trigger: TGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAA...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTATGGCTCCACAAGATTTaGAGGTTAATCTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: QNVHLLARDLPSLLELIVWLHKI*RLIWKH
Trigger: ATGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCA...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGAACACGATTGAGATCTaGAAAATCAAAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQNTIEI*KIKAAA
Trigger: TGCTGCAGCTTTGATTTTCCAGATCTCAATCGTGTT...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CCA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTAAAATCACTAGATTCTaGGTGCAAGTAGCAACCCTG +
Preference number: 4 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFKITRF*VQVATL
Trigger: CAGGGTTGCTACTTGCACCCAGAATCTAGTGATTTT...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAAATGTGTTTGGGAGTTTaGAGAGTGAAAACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: YKLKYFPQGCVLRDRALEMCLGV*RVKTLR
Trigger: TCTCAGGGTTTTCACTCTTCAAACTCCCAAACACAT...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
3UTR CAA 72 bp AGTCTCCTGGATGGTGAAGGCTGCTGGATCTCAATATaGATTGAAGCAACACGATTGAGATCTGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: SLLDGEGCWISI*IEATRLRSGKS
Trigger: TGATTTTCCAGATCTCAATCGTGTTGCTTCAATCAATATTGAGATCCAGCAGCCTTCACCATCCAGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp ATCACATCCAATGAAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCATCATCTACAGGCGGATaGAGAATCGAAATGCATACA +
Preference number: 4 (lower is better)
Translates to: ITSNEEGGNSSHTHPSFSSSTGG*RIEMHT
Trigger: TGTATGCATTTCGATTCTTCATCCGCCTGTAGATGA...TGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTTCATTGGATGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATGATCTCAATATTGATTaGAGCAACACGATTGAGATC +
Preference number: 4 (lower is better)
Translates to: RALEPASGFRSVSLKYQNDLNID*SNTIEI
Trigger: GATCTCAATCGTGTTGCTTCAATCAATATTGAGATC...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAATTACCTTCAAGTTCTaGAGTCTCCTGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQITFKF*SLLDGE
Trigger: TTCACCATCCAGGAGACTTCAGAACTTGAAGGTAAT...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATTCTGTTCCATGGATCTaGCTAAAATCACTAGATTCT +
Preference number: 4 (lower is better)
Translates to: RALEPASGFRSVSLKYQNSVPWI*LKSLDS
Trigger: AGAATCTAGTGATTTTAGTCAGATCCATGGAACAGA...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR TCA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTATGTAATCAGGTAACTTaGCAATGTATTACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLCNQVT*QCITKL
Trigger: CAGCTTCGTAATACATTGTCAAGTTACCTGATTACA...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp AGAGCTCTGGAACCAGCCTCTGGGTTTCGTTCAGTCAGTCTAAAATACCAGAATTGGAAGGGTAAAGAATaGAAGAATTCAGACATTCTG +
Preference number: 4 (lower is better)
Translates to: RALEPASGFRSVSLKYQNWKGKE*KNSDIL
Trigger: CAGAATGTCTGAATTCTTGCATTCTTTACCCTTCCA...ATTCTGGTATTTTAGACTGACTGAACGAAACCCAGAGGCTGGTTCCAGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAAATGGGGCTGAACGAATaGACACACACTAATGTAAAT +
Preference number: 4 (lower is better)
Translates to: YKLKYFPQGCVLRDRALEMGLNE*THTNVN
Trigger: ATTTACATTAGTGTGTGTGCATTCGTTCAGCCCCAT...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp GTTACGATGGTTTCATGGAGATTGAAGGAGCACATTTCATCAGGCTTAGCACAAGATGAAGAATCGAAATaGATACATCTCCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: VTMVSWRLKEHISSGLAQDEESK*IHLHSH
Trigger: ATGAGAATGGAGATGTATGCATTTCGATTCTTCATC...TTGTGCTAAGCCTGATGAAATGTGCTCCTTCAATCTCCATGAAACCATCGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR GCA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCAAGACCAAACGTGTTTTaGTGTGAACATTCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPRPNVF*CEHSVE
Trigger: CTCTACAGAATGTTCACAGCAAAACACGTTTGGTCT...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp GGTACAACCTCCACTTGGCGCTCCGGCTCCCTGAGTCAATGTCTAACAGAGGCCTCCCTAATCTGCCCTTaGGTTCTTTCTGAGTTACGA +
Preference number: 5 (lower is better)
Translates to: GTTSTWRSGSLSQCLTEASLICP*VLSELR
Trigger: TCGTAACTCAGAAAGAACCAAAGGGCAGATTAGGGA...GGCCTCTGTTAGACATTGACTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp GGGCTCCAAGAGAATAAGACCAAGCTACTGGCTGTAAACTTGCATGGGGGTTTGAGTATTCCGCCAGGGTaGTGGGGACCTTCACTCCAT +
Preference number: 5 (lower is better)
Translates to: GLQENKTKLLAVNLHGGLSIPPG*WGPSLH
Trigger: ATGGAGTGAAGGTCCCCACAACCCTGGCGGAATACT...CAAACCCCCATGCAAGTTTACAGCCAGTAGCTTGGTCTTATTCTCTTGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp CAGAATGTCCACCTGCTAGCAAGAGACTTACCCAGTCTTCTGGAACTGATTGTAGAGCCAAAGGAGGAGTaGACACTAGTGCCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: QNVHLLARDLPSLLELIVEPKEE*TLVPRG
Trigger: ACCCCTGGGCACTAGTGTCAACTCCTCCTTTGGCTC...TACAATCAGTTCCAGAAGACTGGGTAAGTCTCTTGCTAGCAGGTGGACATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTAGGTACAACCTCCACTaGGCGCTCCGGCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPRYNLH*ALRLPE
Trigger: CTCAGGGAGCCGGAGCGCCAAGTGGAGGTTGTACCT...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp CTTACCCAGTCTTCTGGAACTGATTGTACTCATCAGAGGCAAACCCAGCCCTTGGCTGCAGCAAGTGCATaGCAGGAAGATCTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: LTQSSGTDCTHQRQTQPLAAASA*QEDLAL
Trigger: TAAGGCTAGATCTTCCTGCAATGCACTTGCTGCAGC...CAAGGGCTGGGTTTGCCTCTGATGAGTACAATCAGTTCCAGAAGACTGGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp TGTGCCCCAAACGTAAGGAAACCAGCAAGTAAAGAAGCAATTTGCCAGGGTAAGGGGTTTGGGGGCATTTaGGGGGAGGTAAATCAGCAC +
Preference number: 5 (lower is better)
Translates to: CAPNVRKPASKEAICQGKGFGGI*GEVNQH
Trigger: GTGCTGATTTACCTCCCCCAAAATGCCCCCAAACCC...CTTACCCTGGCAAATTGCTTCTTTACTTGCTGGTTTCCTTACGTTTGGGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAAACTGAAGCATCGACATaGGCTGGGGAGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: YKLKYFPQGCVLRDRALETEAST*AGEKVL
Trigger: CAACACCTTCTCCCCAGCCAATGTCGATGCTTCAGT...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTCTACTGGCTGTAAACTaGCATGGGGGTTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPLLAVN*HGGLGA
Trigger: TGCCCCCAAACCCCCATGCAAGTTTACAGCCAGTAG...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATCACATCCAATGAAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCAGTACATGGTTCCGGATaGAGCCTGAGACCTCCACTC +
Preference number: 5 (lower is better)
Translates to: ITSNEEGGNSSHTHPSFSVHGSG*SLRPPL
Trigger: GAGTGGAGGTCTCAGGCTCAATCCGGAACCATGTAC...TGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTTCATTGGATGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTATGTCCCCTAAGAGCCTaGCTTGTTAAACAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLCPLRA*LVKQSH
Trigger: ATGGGACTGTTTAACAAGCAAGGCTCTTAGGGGACA...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp GCGGTAACTCGTCTCACACACATCCAAGTTTTTCACTATCAGTATAAGCAGCTCAGGCAAACCCAGCCCTaGACACTTTTAACACCCCAA +
Preference number: 5 (lower is better)
Translates to: AVTRLTHIQVFHYQYKQLRQTQP*TLLTPQ
Trigger: TTGGGGTGTTAAAAGTGTCAAGGGCTGGGTTTGCCT...GAGCTGCTTATACTGATAGTGAAAAACTTGGATGTGTGTGAGACGAGTTACCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGGAAGGCACTTTAGTTTaGATGCAGTATTCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWEGTLV*MQYSAR
Trigger: CCTGGCGGAATACTGCATCAAAACTAAAGTGCCTTC...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp TTTTGCTACCCAGTATATGCAGCACTTGTGAACTCCCAACAGGTTCCCAGCTTTGTGATTTTTAACTCTTaGCTCCCACACGCACTCATC +
Preference number: 5 (lower is better)
Translates to: FCYPVYAALVNSQQVPSFVIFNS*LPHALI
Trigger: GATGAGTGCGTGTGGGAGCAAAGAGTTAAAAATCAC...AAAGCTGGGAACCTGTTGGGAGTTCACAAGTGCTGCATATACTGGGTAGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp GTTGACACTAGTGCCCAGGGGTCTGAAATAGGACTACAGTCAGTCCTTGCTGCAAAATGTAAACCTTGTTaGTTTTATCAGGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: VDTSAQGSEIGLQSVLAAKCKPC*FYQDGR
Trigger: CCTCCCATCCTGATAAAACAAACAAGGTTTACATTT...TGCAGCAAGGACTGACTGTAGTCCTATTTCAGACCCCTGGGCACTAGTGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTATCTGAGCTGTTGTCATaGGAAGGCACTTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLSELLS*EGTLVL
Trigger: CAAAACTAAAGTGCCTTCCAATGACAACAGCTCAGA...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp CCACCCAGCCTCAAAATACACAGAACTGAAGAGCATCTAGTGAGGCCTCAATTAAGCAAATCTGAGCTGTaGTCATTGGAAGGCACTTTA +
Preference number: 5 (lower is better)
Translates to: PPSLKIHRTEEHLVRPQLSKSEL*SLEGTL
Trigger: TAAAGTGCCTTCCAATGACAACAGCTCAGATTTGCT...TAATTGAGGCCTCACTAGATGCTCTTCAGTTCTGTGTATTTTGAGGCTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp AGCAAGTGCATTGCAGGAAGATCTAGCCTTATCTGGCCTAAAAACTGCCTGCAGTTTTTCCATTTTCTTTaGCTACCCAGTATATGCAGC +
Preference number: 5 (lower is better)
Translates to: SKCIAGRSSLIWPKNCLQFFHFL*LPSICS
Trigger: GCTGCATATACTGGGTAGCAAAAGAAAATGGAAAAA...CTGCAGGCAGTTTTTAGGCCAGATAAGGCTAGATCTTCCTGCAATGCACTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATCTGGTGCACCCCCATAACAACCAAAAATTACCTTCAAGTTCTGAAGTCTCCTTTGGCTCCACAAGATTaGCAGGTTAATCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: IWCTPITTKNYLQVLKSPLAPQD*QVNLEA
Trigger: TGCTTCCAGATTAACCTGCAAATCTTGTGGAGCCAA...AGGAGACTTCAGAACTTGAAGGTAATTTTTGGTTGTTATGGGGGTGCACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp TACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGAAATGGTTTCATGGAGATaGAAGGAGCACATTTCATCA +
Preference number: 5 (lower is better)
Translates to: YKLKYFPQGCVLRDRALEMVSWR*KEHISS
Trigger: TGATGAAATGTGCTCCTTCAATCTCCATGAAACCAT...TTCCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATTACAAACTCAAGTATTTTCCACAGGGATGTGTTCTCAGGGACAGAGCTCTGGTGCTGGATCTCAATATaGATTGAAGCAACACGATTG +
Preference number: 5 (lower is better)
Translates to: ITNSSIFHRDVFSGTELWCWISI*IEATRL
Trigger: CAATCGTGTTGCTTCAATCAATATTGAGATCCAGCA...CCAGAGCTCTGTCCCTGAGAACACATCCCTGTGGAAAATACTTGAGTTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCATTGGGGTGCCACATTTaGGTCAAGAATCTGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPLGCHI*VKNLKV
Trigger: TACCTTCAGATTCTTGACCAAAATGTGGCACCCCAA...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp ATCACATCCAATGAAGAAGGCGGTAACTCGTCTCACACACATCCAAGTTTTTCAATTGAAGCAACACGATaGAGATCTGGAAAATCAAAG +
Preference number: 5 (lower is better)
Translates to: ITSNEEGGNSSHTHPSFSIEATR*RSGKSK
Trigger: CTTTGATTTTCCAGATCTCAATCGTGTTGCTTCAAT...TGAAAAACTTGGATGTGTGTGAGACGAGTTACCGCCTTCTTCATTGGATGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS-3UTR CAA 90 bp AGGTTAATCTGGAAGCATTACTTACAAAGTATGGGGAGTAAAAAGGTAGTTCCAGACTACAGTCAGTCCTaGCTGCATTTTCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RLIWKHYLQSMGSKKVVPDYSQS*LHFPSE
Trigger: TTCAGAAGGAAAATGCAGCAAGGACTGACTGTAGTC...TGGAACTACCTTTTTACTCCCCATACTTTGTAAGTAATGCTTCCAGATTAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS TCA 90 bp TTCATCATCAATGTCGTCATCATACAAGTCGTCGTAAAGCAAATCTaGGCTGTTGTCATTGGAAGGCACTTTAGTTTTGATGCAGTATTC +
Preference number: 5 (lower is better)
Translates to: FIINVVIIQVVVKQI*AVVIGRHFSFDAVF
Trigger: GAATACTGCATCAAAACTAAAGTGCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACATTGATGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS GCA 72 bp TCCTGCAGGGATTTCAGCTCGAGCATCAGGGCCTTCTaGGAGCTGGTCATCTGCTGCTGGGCCATCGCGGCG +
Preference number: 6 (lower is better)
Translates to: SCRDFSSSIRAF*ELVICCWAIAA
Trigger: CGCCGCGATGGCCCAGCAGCAGATGACCAGCTCGCAGAAGGCCCTGATGCTCGAGCTGAAATCCCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS GCA 72 bp ACCAGGGTGATCCGGAAGCCCTCCACCGGTTCCTCCTaGAGGGATTTCAGCTCGAGCATCAGGGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: TRVIRKPSTGSS*RDFSSSIRAFC
Trigger: GCAGAAGGCCCTGATGCTCGAGCTGAAATCCCTGCAGGAGGAACCGGTGGAGGGCTTCCGGATCACCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS CAA 90 bp TTCCTGAACATAACTGAAGCATCGACATTGGCTGGGGAGAAGGTGTaGGGCTCATTAAGCAGTGAGATTACACTTAATAGGATAGTCCTC +
Preference number: 6 (lower is better)
Translates to: FLNITEASTLAGEKV*GSLSSEITLNRIVL
Trigger: GAGGACTATCCTATTAAGTGTAATCTCACTGCTTAATGAGCCCAACACCTTCTCCCCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS CAA 72 bp ATAACTGAAGCATCGACATTGGCTGGGGAGAAGGTGTaGGGCTCATTAAGCAGTGAGATTACACTTAATAGG +
Preference number: 6 (lower is better)
Translates to: ITEASTLAGEKV*GSLSSEITLNR
Trigger: CCTATTAAGTGTAATCTCACTGCTTAATGAGCCCAACACCTTCTCCCCAGCCAATGTCGATGCTTCAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263228.4
CDS TCA 72 bp GTGCCACATTTTGGTCAAGAATCTGAAGGTAGGTGGTaGATAGGGGTAGTCAATAGGAAATTTAATATGCGC +
Preference number: 6 (lower is better)
Translates to: VPHFGQESEGRW*IGVVNRKFNMR
Trigger: GCGCATATTAAATTTCCTATTGACTACCCCTATTCACCACCTACCTTCAGATTCTTGACCAAAATGTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263228.4