RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2QL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000215218

Ensembl transcript IDs: ENST00000399816.4

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCGCCGGCTGCCACCCAGCCCAACCCGGGGTCAGACCAGTCTCTTaGCTGCACCCCTTGGTGCAGTTCTCAGAGAGCACCGTGAACCTG +
Preference number: 1 (lower is better)
Translates to: VAGCHPAQPGVRPVS*LHPLVQFSESTVNL
Trigger: CAGGTTCACGGTGCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAGAGACTGGTCTGACCCCGGGTTGGGCTGGGTGGCAGCCGGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp TGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTaGGCTCCAGAGGCAGGTGTCCACTTCAGTGGGGTGGAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: CVGTWPQASGLSFSP*APEAGVHFSGVEGG
Trigger: GCCTCCTTCCACCCCACTGAAGTGGACACCTGCCTCTGGAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGTaGGGACAGAGTCCACGCTCCCTTTCAAGGTGCCCTCAGCCCCTC +
Preference number: 1 (lower is better)
Translates to: GERWQGDSSSPVQGQ*GQSPRSLSRCPQPL
Trigger: GAGGGGCTGAGGGCACCTTGAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp TTGGGGGCAGTGCAGGGATCTCTTTATCCCTCCATGCGGCCTTACTaGCCTGGGAGGACGGCCTCGCACCTGACCCCCTCATTGCACTCT +
Preference number: 1 (lower is better)
Translates to: LGAVQGSLYPSMRPY*PGRTASHLTPSLHS
Trigger: AGAGTGCAATGAGGGGGTCAGGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAGATCCCTGCACTGCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp CAAACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTaGAATATGAACGGCGCCATTTACATGGAAATGGAGCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: QTRAGDARRRCTASL*NMNGAIYMEMEPAG
Trigger: CCCTGCTGGCTCCATTTCCATGTAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTaGTCTGAGCCCCAGAGGGCGCACCTGGTGTCTACGCCACCGTCT +
Preference number: 1 (lower is better)
Translates to: PFPNIGRDCSQLTIR*SEPQRAHLVSTPPS
Trigger: AGACGGTGGCGTAGACACCAGGTGCGCCCTCTGGGGCTCAGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp GCTCAGTGTCCTAAGGGTGCCTCCATGGCTGGGCACCACCGTGCTTaGCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAAC +
Preference number: 1 (lower is better)
Translates to: AQCPKGASMAGHHRA*LRRESTRKGVRTPN
Trigger: GTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAGCACGGTGGTGCCCAGCCATGGAGGCACCCTTAGGACACTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GGCAGTGCAGGGATCTCTTTATCCCTCCATGCGGCCTTACTGACCTaGGAGGACGGCCTCGCACCTGACCCCCTCATTGCACTCTATTTG +
Preference number: 1 (lower is better)
Translates to: GSAGISLSLHAALLT*EDGLAPDPLIALYL
Trigger: CAAATAGAGTGCAATGAGGGGGTCAGGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAGATCCCTGCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp AGGCTGTCAGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATaGATAGGGACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTT +
Preference number: 1 (lower is better)
Translates to: RLSGGTVSCFLKSAP*IGTLQVRGGKGTPV
Trigger: AACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCTGACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CTGGTGTCTACGCCACCGTCTGCCAGGGGTGGTCGCAGTATCCTCTaGCTTCCATCTAATGGCACTGGTTTATCTGTGGACAGCAGCACA +
Preference number: 1 (lower is better)
Translates to: LVSTPPSARGGRSIL*LPSNGTGLSVDSST
Trigger: TGTGCTGCTGTCCACAGATAAACCAGTGCCATTAGATGGAAGGCAGAGGATACTGCGACCACCCCTGGCAGACGGTGGCGTAGACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp CAAGAAAAATCAAACTCTGAGTGTATGGAAGGAGCGACACTGAGCTaGGTGTCTCTCTGCTCTGTCGCCGGCTGCCACCCAGCCCAACCC +
Preference number: 1 (lower is better)
Translates to: QEKSNSECMEGATLS*VSLCSVAGCHPAQP
Trigger: GGGTTGGGCTGGGTGGCAGCCGGCGACAGAGCAGAGAGACACTCAGCTCAGTGTCGCTCCTTCCATACACTCAGAGTTTGATTTTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp CCATGCAAGAAAAATCAAACTCTGAGTGTATGGAAGGAGCGACACTaGGCTGAGTGTCTCTCTGCTCTGTCGCCGGCTGCCACCCAGCCC +
Preference number: 1 (lower is better)
Translates to: PCKKNQTLSVWKERH*AECLSALSPAATQP
Trigger: GGGCTGGGTGGCAGCCGGCGACAGAGCAGAGAGACACTCAGCTCAGTGTCGCTCCTTCCATACACTCAGAGTTTGATTTTTCTTGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp GACCTTCCAGGAAGAAAAACAGAGATACAGAGCACAGCAAACACGTaGCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATAT +
Preference number: 1 (lower is better)
Translates to: DLPGRKTEIQSTANT*RGRTAEMHGVPVKY
Trigger: ATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTTTGCTGTGCTCTGTATCTCTGTTTTTCTTCCTGGAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GCCTTGTGGCTCCTGTCCTACTGTGGACAAGCCCCTCAAAGTCTCTaGGCTCGCCTCCTTCACTGCAGAGGGTGTAAAATTAGGCTAAGT +
Preference number: 1 (lower is better)
Translates to: ALWLLSYCGQAPQSL*ARLLHCRGCKIRLS
Trigger: ACTTAGCCTAATTTTACACCCTCTGCAGTGAAGGAGGCGAGCCCAGAGACTTTGAGGGGCTTGTCCACAGTAGGACAGGAGCCACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp AAGAGAAAGCCACCTCCTGGCTTTAATTCTGCGAGAGACACAGGGTaGATTGGCGGTTGGGGGCAGTGCAGGGATCTCTTTATCCCTCCA +
Preference number: 1 (lower is better)
Translates to: KRKPPPGFNSARDTG*IGGWGQCRDLFIPP
Trigger: TGGAGGGATAAAGAGATCCCTGCACTGCCCCCAACCGCCAATTCACCCTGTGTCTCTCGCAGAATTAAAGCCAGGAGGTGGCTTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp GGCATTCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATaGACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGAC +
Preference number: 1 (lower is better)
Translates to: GIQDAVLAGVKTGGG*TALRRCQGTGVCVD
Trigger: GTCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp TCTCCTGGGCATTCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTaGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: SPGHSGCSSGWSKNG*RMHSIEEMSGYWCV
Trigger: CACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGAATGCCCAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp AAGCAACATAAAGGATCAGAAAGCCACAGTAAGGCAGTGGCCTTGTaGCTCCTGTCCTACTGTGGACAAGCCCCTCAAAGTCTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: KQHKGSESHSKAVAL*LLSYCGQAPQSLWA
Trigger: AGCCCAGAGACTTTGAGGGGCTTGTCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGCTTTCTGATCCTTTATGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CCGTGGGGGAGATTAAATAACAGGAAGTTTACACCACAGCAAGGGTaGTCACCCATCCCAATTTCGGGGGACACACAAGTGACTATTGGG +
Preference number: 1 (lower is better)
Translates to: PWGRLNNRKFTPQQG*SPIPISGDTQVTIG
Trigger: CCCAATAGTCACTTGTGTGTCCCCCGAAATTGGGATGGGTGAGCACCCTTGCTGTGGTGTAAACTTCCTGTTATTTAATCTCCCCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp TACTGTGGACAAGCCCCTCAAAGTCTCTGGGCTCGCCTCCTTCACTaGAGAGGGTGTAAAATTAGGCTAAGTGGTCTTCCAGATTCAGTG +
Preference number: 1 (lower is better)
Translates to: YCGQAPQSLWARLLH*RGCKIRLSGLPDSV
Trigger: CACTGAATCTGGAAGACCACTTAGCCTAATTTTACACCCTCTGCAGTGAAGGAGGCGAGCCCAGAGACTTTGAGGGGCTTGTCCACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp ACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTaGGTTCCTATCCAGGGAAGGGGCTGTACCTTAATCTTCTGCATG +
Preference number: 1 (lower is better)
Translates to: TCLAWCWCLCAIPIF*VPIQGRGCTLIFCM
Trigger: CATGCAGAAGATTAAGGTACAGCCCCTTCCCTGGATAGGAACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp TCCTGTGGGTGTTTCTCAGCTGGCTTGGAAGACTTGCAACTGTACTaGTTCAATGATGGGGTGAAGAGTGTGTGTTTGGTGAGGGCCACA +
Preference number: 1 (lower is better)
Translates to: SCGCFSAGLEDLQLY*FNDGVKSVCLVRAT
Trigger: TGTGGCCCTCACCAAACACACACTCTTCACCCCATCATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp TCCCACAGATACATGGGTGTGTGGAGCTATCGGGACATGAACATTTaGACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGA +
Preference number: 1 (lower is better)
Translates to: SHRYMGVWSYRDMNI*THCLIIPSLSVQRG
Trigger: TCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTATCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp GCTTCCCAAAACAGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTaGTTTGGGCACAGAATGGATCCTGTGGGTGTTTCTCAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: ASQNSWREFLPFAPI*FGHRMDPVGVSQLA
Trigger: AGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CCAAGCCCCTTACAGAAGCTTCCCAAAACAGTTGGAGGGAATTTCTaGCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATCCTGTGG +
Preference number: 1 (lower is better)
Translates to: PSPLQKLPKTVGGNF*PLLQFALGTEWILW
Trigger: CCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGCTTCTGTAAGGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GTCGCAGTATCCTCTGCCTTCCATCTAATGGCACTGGTTTATCTGTaGACAGCAGCACACCACAAATCAGCATCGAGAGCACGTTTTCAC +
Preference number: 1 (lower is better)
Translates to: VAVSSAFHLMALVYL*TAAHHKSASRARFH
Trigger: GTGAAAACGTGCTCTCGATGCTGATTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGCCATTAGATGGAAGGCAGAGGATACTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATaGATCCTGTGGGTGTTTCTCAGCTGGCTTGGAAGACTTGCAACT +
Preference number: 1 (lower is better)
Translates to: GGNFCPLLQFALGTE*ILWVFLSWLGRLAT
Trigger: AGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp TGTGGGCTCTGGCTTGGTTTGAGTTCCCACAGATACATGGGTGTGTaGAGCTATCGGGACATGAACATTTGCACCCACTGTCTGATTATT +
Preference number: 1 (lower is better)
Translates to: CGLWLGLSSHRYMGV*SYRDMNICTHCLII
Trigger: AATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTATCTGTGGGAACTCAAACCAAGCCAGAGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp CCAAAACAGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTaGGCACAGAATGGATCCTGTGGGTGTTTCTCAGCTGGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: PKQLEGISALCSNLL*AQNGSCGCFSAGLE
Trigger: TTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GTGTTTCTCAGCTGGCTTGGAAGACTTGCAACTGTACTGATTCAATaGTGGGGTGAAGAGTGTGTGTTTGGTGAGGGCCACATGAATTGC +
Preference number: 1 (lower is better)
Translates to: VFLSWLGRLATVLIQ*WGEECVFGEGHMNC
Trigger: GCAATTCATGTGGCCCTCACCAAACACACACTCTTCACCCCATCATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CCTTACAGAAGCTTCCCAAAACAGTTGGAGGGAATTTCTGCCCTTTaGTCCAATTTGCTTTGGGCACAGAATGGATCCTGTGGGTGTTTC +
Preference number: 1 (lower is better)
Translates to: PYRSFPKQLEGISAL*SNLLWAQNGSCGCF
Trigger: GAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGCTTCTGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp TTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATCCTGTaGGTGTTTCTCAGCTGGCTTGGAAGACTTGCAACTGTACTGATT +
Preference number: 1 (lower is better)
Translates to: FCPLLQFALGTEWIL*VFLSWLGRLATVLI
Trigger: AATCAGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GAGTGTGTGTTTGGTGAGGGCCACATGAATTGCCTAATAGTCTCATaGAGCAACATAAAGGATCAGAAAGCCACAGTAAGGCAGTGGCCT +
Preference number: 1 (lower is better)
Translates to: ECVFGEGHMNCLIVS*SNIKDQKATVRQWP
Trigger: AGGCCACTGCCTTACTGTGGCTTTCTGATCCTTTATGTTGCTTCATGAGACTATTAGGCAATTCATGTGGCCCTCACCAAACACACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CTTGCACATGTCTTTAATTTCTGCAGTGCAATTTGGCACTTGCCTTaGTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTTCC +
Preference number: 1 (lower is better)
Translates to: LAHVFNFCSAIWHLP*LVLVPVRYSYLLSS
Trigger: GGAACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAATTAAAGACATGTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp TGCTCACCCATCCCAATTTCGGGGGACACACAAGTGACTATTGGGTaGAATAGACCCGATCATGCAAATCATCGTATGATCACTTGGTAT +
Preference number: 1 (lower is better)
Translates to: CSPIPISGDTQVTIG*NRPDHANHRMITWY
Trigger: ATACCAAGTGATCATACGATGATTTGCATGATCGGGTCTATTTCACCCAATAGTCACTTGTGTGTCCCCCGAAATTGGGATGGGTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp CTTGCTCCCCTCTGCTTTGATTGTTGCTGTTTGGCCAGCACACTTTaGTCCCGTGTTTCTTCTGGAACCAAACTAACATTACTTATTGCT +
Preference number: 1 (lower is better)
Translates to: LAPLCFDCCCLASTL*SRVSSGTKLTLLIA
Trigger: AGCAATAAGTAATGTTAGTTTGGTTCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp TTGTCTAGCCTTATCATGACCTTGAAAGAAAATCTTGCTCCCCTCTaGTTTGATTGTTGCTGTTTGGCCAGCACACTTTGCTCCCGTGTT +
Preference number: 1 (lower is better)
Translates to: LSSLIMTLKENLAPL*FDCCCLASTLCSRV
Trigger: AACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAAGGTCATGATAAGGCTAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GCCAAATGTCAGGTTTCCAGGATGGAGAATGCCACCATAGAGGGTTaGATGAATGAACATCGTAAGTTCACTGTCATCAAGTTTCACGAC +
Preference number: 1 (lower is better)
Translates to: AKCQVSRMENATIEG*MNEHRKFTVIKFHD
Trigger: GTCGTGAAACTTGATGACAGTGAACTTACGATGTTCATTCATCCAACCCTCTATGGTGGCATTCTCCATCCTGGAAACCTGACATTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GGTGATTGGTTCAGGAAAATTATTGGACGGGAAGGAGTTCTGCATTaGGAAGAGGACAGATGGGTTTGTGATTTTCTGTTTGTTTGGCTC +
Preference number: 1 (lower is better)
Translates to: GDWFRKIIGREGVLH*EEDRWVCDFLFVWL
Trigger: GAGCCAAACAAACAGAAAATCACAAACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAACCAATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp TGCTTTCCCGAATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTaGCCACATTCTGTGGATCAGACAGGCCCTGGGCTTAAAAATGAT +
Preference number: 1 (lower is better)
Translates to: CFPECQQSLFAFPDY*PHSVDQTGPGLKND
Trigger: ATCATTTTTAAGCCCAGGGCCTGTCTGATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATTCGGGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp CATCTGAACTTGATCGAATCATCCCTTCAGCTCCTTGGCTGCTTCTaGGGACTATTTCAATCTACTGAATTTTTGCAAAGACTATGGGTT +
Preference number: 1 (lower is better)
Translates to: HLNLIESSLQLLGCF*GLFQSTEFLQRLWV
Trigger: AACCCATAGTCTTTGCAAAAATTCAGTAGATTGAAATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGATGATTCGATCAAGTTCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GGGAAATGTCACCATCTCAACATGTGTTCTAAAGTGACTTCGAGGTaGTCATTCATTTATAATCGAAACATAATCCGAACGGCATTTGCT +
Preference number: 1 (lower is better)
Translates to: GKCHHLNMCSKVTSR*SFIYNRNIIRTAFA
Trigger: AGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAATGATCACCTCGAAGTCACTTTAGAACACATGTTGAGATGGTGACATTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 90 bp GAGAGATGGCCAGTTAGTTATTGGTTGATTTTTGGGTCAGTTGGTTaGCTTAATGTAAGAACTGGGGACAGAAAGCAAGTATATGATTAC +
Preference number: 1 (lower is better)
Translates to: ERWPVSYWLIFGSVG*LNVRTGDRKQVYDY
Trigger: GTAATCATATACTTGCTTTCTGTCCCCAGTTCTTACATTAAGTCAACCAACTGACCCAAAAATCAACCAATAACTAACTGGCCATCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 90 bp ACTTTGCTCCCGTGTTTCTTCTGGAACCAAACTAACATTACTTATTaGTTTCCCGAATGTCAACAGAGTTTGTTTGCCTTTCCAGATTAT +
Preference number: 1 (lower is better)
Translates to: TLLPCFFWNQTNITY*FPECQQSLFAFPDY
Trigger: ATAATCTGGAAAGGCAAACAAACTCTGTTGACATTCGGGAAAGCAATAAGTAATGTTAGTTTGGTTCCAGAAGAAACACGGGAGCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 90 bp GTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTaGATCAGACAGGCCCTGGGCTTAAAAATGATATTTAATACTATG +
Preference number: 1 (lower is better)
Translates to: VNRVCLPFQIIDHIL*IRQALGLKMIFNTM
Trigger: CATAGTATTAAATATCATTTTTAAGCCCAGGGCCTGTCTGATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCAGCCAGCAGGGGCATTaGGTTTCCTGCCGGCTCGTC +
Preference number: 2 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGSQQGH*VSCRLV
Trigger: GACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCT...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCGGCTGGGCACCACCGTaGTTGCCTACGAAGGGAGTC +
Preference number: 2 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGGWAPP*LPTKGV
Trigger: GACTCCCTTCGTAGGCAAGCACGGTGGTGCCCAGCC...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGCCCAGAGGGCGCACCTaGTGTCTACGCCACCGTCTG +
Preference number: 2 (lower is better)
Translates to: ATHRASSTRQARLSGGTVPRGRT*CLRHRL
Trigger: CAGACGGTGGCGTAGACACCAGGTGCGCCCTCTGGG...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TGTCGCCGGCTGCCACCCAGCCCAACCCGGGGTCAGACCAGTCTCTaGGCTGCACCCCTTGGTGCAGTTCTCAGAGAGCACCGTGAACCT +
Preference number: 2 (lower is better)
Translates to: CRRLPPSPTRGQTSL*AAPLGAVLREHREP
Trigger: AGGTTCACGGTGCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAGAGACTGGTCTGACCCCGGGTTGGGCTGGGTGGCAGCCGGCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGGGTGCCTCCATGGCTaGGCACCACCGTGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQGCLHG*APPCLP
Trigger: AGGCAAGCACGGTGGTGCCCAGCCATGGAGGCACCC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGGACCAGTCTCTTGGCTaGACCCCTTGGTGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: ATHRASSTRQARLSGGTVDQSLG*TPWCSS
Trigger: AGAACTGCACCAAGGGGTGCAGCCAAGAGACTGGTC...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCACCGTCTGCCAGGGGTaGTCGCAGTATCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFTVCQG*SQYPLP
Trigger: AGGCAGAGGATACTGCGACCACCCCTGGCAGACGGT...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGTCAGACCAGTCTCTTaGCTGCACCCCTTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQVRPVS*LHPLVQ
Trigger: CTGCACCAAGGGGTGCAGCCAAGAGACTGGTCTGAC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCCTCATTTCTGGTACCTaGCTTAGAACGCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGLISGT*LRTLLW
Trigger: CCAGAGCAGCGTTCTAAGTCAGGTACCAGAAATGAG...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGATTTGGCACTTGCCTTaGTTGGTGCTGGTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: ATHRASSTRQARLSGGTVIWHLP*LVLVPV
Trigger: CACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAAT...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGCTTCAGCTCCTTGGCTaGTTCTGGGGACTATTTCAA +
Preference number: 2 (lower is better)
Translates to: ATHRASSTRQARLSGGTVLQLLG*FWGLFQ
Trigger: TTGAAATAGTCCCCAGAAGCAGCCAAGGAGCTGAAG...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAATGCTCTGTCGCCGGCTaGCACCCAGCCCAACCCGGG +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLECSVAG*HPAQPG
Trigger: CCCGGGTTGGGCTGGGTGGCAGCCGGCGACAGAGCA...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCACTTGCCTTGCTTGGTaGTGGTGCCTGTGCGCTATT +
Preference number: 2 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFTCLAW*WCLCAI
Trigger: AATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGT...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGACTGTCATTTTGGTCTaGCAGAGCTGCCTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQTVILV*QSCLCA
Trigger: TGCACACAGGCAGCTCTGCCAGACCAAAATGACAGT...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGAATGGGCAGCCCTGCTaGAAGGCGCCAATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: IIATHRASSTRQARLSGGNGQPC*KAPILV
Trigger: AACAAGGATTGGCGCCTTTCAGCAGGGCTGCCCATT...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTCCGGCTCGTCGGAGCTaGTGTCATGGAAAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRPARRS*CHGKKL
Trigger: GAGCTTCTTTCCATGACAGCAGCTCCGACGAGCCGG...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTGTCTACGCCACCGTCTaGCAGGGGTGGTCGCAGTAT +
Preference number: 2 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSVYATV*QGWSQY
Trigger: ATACTGCGACCACCCCTGGCAGACGGTGGCGTAGAC...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGCACTGGTTTATCTGTaGACAGCAGCACACCACAAA +
Preference number: 2 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQALVYL*TAAHHK
Trigger: TTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp GATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATaGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGACAGGCGCTCG +
Preference number: 2 (lower is better)
Translates to: DAVLAGVKTGGGCTA*RRCQGTGVCVDRRS
Trigger: CGAGCGCCTGTCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp GATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTGGCTaGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACC +
Preference number: 2 (lower is better)
Translates to: DYSLAVCPKRNRFLG*CGNVAPGFRPLLLT
Trigger: GGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCCAAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp GAAAGCCACCTCCTGGCTTTAATTCTGCGAGAGACACAGGGTGAATaGGCGGTTGGGGGCAGTGCAGGGATCTCTTTATCCCTCCATGCG +
Preference number: 2 (lower is better)
Translates to: ESHLLALILRETQGE*AVGGSAGISLSLHA
Trigger: CGCATGGAGGGATAAAGAGATCCCTGCACTGCCCCCAACCGCCAATTCACCCTGTGTCTCTCGCAGAATTAAAGCCAGGAGGTGGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCAGAAAAATCAAACTCTaGGTGTATGGAAGGAGCGAC +
Preference number: 2 (lower is better)
Translates to: LVWERGPRLQASPSHPGLRKIKL*VYGRSD
Trigger: GTCGCTCCTTCCATACACTCAGAGTTTGATTTTTCT...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGGCTGCACCCCTTGGTaGAGTTCTCAGAGAGCACCG +
Preference number: 2 (lower is better)
Translates to: PKHFCCVILANSHTDLVGGCTPW*SSQRAP
Trigger: CGGTGCTCTCTGAGAACTGCACCAAGGGGTGCAGCC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTaGGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: CLIIPSLSVQRGIGS*ACVGTWPQASGLSF
Trigger: GAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCCAAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTTGCACGGCGTCCCTGTaGAATATGAACGGCGCCATT +
Preference number: 2 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSCTASL*NMNGAI
Trigger: AATGGCGCCGTTCATATTTCACAGGGACGCCGTGCA...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATCCCGTTCAGGGCCAGTaGGGACAGAGTCCACGCTCC +
Preference number: 2 (lower is better)
Translates to: SWREFLPFAPICFGHRMDPVQGQ*GQSPRS
Trigger: GGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGG...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTGTTCCTTGGCTTGTGTaGGAACGTGGCCCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGVPWLV*ERGPRL
Trigger: AAGCCTGGGGCCACGTTCCCACACAAGCCAAGGAAC...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp AATATGAACGGCGCCATTTACATGGAAATGGAGCCAGCAGGGGCATaGAGTTTCCTGCCGGCTCGTCGGAGCTGCTGTCATGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: NMNGAIYMEMEPAGA*SFLPARRSCCHGKK
Trigger: CTTCTTTCCATGACAGCAGCTCCGACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCTCCATTTCCATGTAAATGGCGCCGTTCATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGCAGAGCTGCCTGTGTaGACTTGGGGGCAAATAAGA +
Preference number: 2 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAAELPV*TWGQIR
Trigger: TCTTATTTGCCCCCAAGTGCACACAGGCAGCTCTGC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGGATGCAGTTCTGGCTaGAGTAAAAACGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAGCSSG*SKNGWR
Trigger: CCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGACTTGGCTGCACCCCTTaGTGCAGTTCTCAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: PKHFCCVILANSHTDLVGLGCTP*CSSQRA
Trigger: TGCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAG...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGTTCAGGAAAATTATTaGACGGGAAGGAGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFVQENY*TGRSSA
Trigger: TGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAAC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCACGTCCCTGTGAAATATaGACGGCGCCATTTACATGG +
Preference number: 2 (lower is better)
Translates to: RWDRVLLPEISSMNRDSARPCEI*TAPFTW
Trigger: CCATGTAAATGGCGCCGTTCATATTTCACAGGGACG...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAGGCCAATTCCCACACTaGCCTGGTAGGAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEGQFPH*PGRSSQ
Trigger: CTGTGAGCTCCTACCAGGTCAGTGTGGGAATTGGCC...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTAATCCGAACGGCATTTaGTCCCTCTTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRNPNGI*SLFLSV
Trigger: TACAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATT...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp ATGAAGCAACATAAAGGATCAGAAAGCCACAGTAAGGCAGTGGCCTaGTGGCTCCTGTCCTACTGTGGACAAGCCCCTCAAAGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: MKQHKGSESHSKAVA*WLLSYCGQAPQSLW
Trigger: CCAGAGACTTTGAGGGGCTTGTCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGCTTTCTGATCCTTTATGTTGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCACTTGCCACTTGGAATaGACATTTTTACTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFTCHLE*TFLLLS
Trigger: GGAAAGAAGTAAAAATGTTCATTCCAAGTGGCAAGT...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTTTTGCACCCACTGTCTaGTTATTCCCTCGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSFAPTV*LFPRCL
Trigger: CAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAA...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGGTCGCAGTATCCTCTaGCTTCCATCTAATGGCACT +
Preference number: 2 (lower is better)
Translates to: PKHFCCVILANSHTDLVGGRSIL*LPSNGT
Trigger: AGTGCCATTAGATGGAAGGCAGAGGATACTGCGACC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTTCGGAGCTGCTGTCATaGAAAGAAGCTCAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSSELLS*KEAQGN
Trigger: ATTGCCCTGAGCTTCTTTCCATGACAGCAGCTCCGA...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTATCCCTTCAGCTCCTTaGCTGCTTCTGGGGACTATT +
Preference number: 2 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSIPSAP*LLLGTI
Trigger: AATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGAT...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAAATAAGTTTGGTGAATaGGCAGCCCTGCTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: RWDRVLLPEISSMNRDSANKFGE*AALLKG
Trigger: GCCTTTCAGCAGGGCTGCCCATTCACCAAACTTATT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGACTGCCTGTGTGCACTTaGGGGCAAATAAGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: PKHFCCVILANSHTDLVGLPVCT*GQIRKW
Trigger: CCACTTTCTTATTTGCCCCCAAGTGCACACAGGCAG...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TTCCCACAGATACATGGGTGTGTGGAGCTATCGGGACATGAACATTaGCACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: FPQIHGCVELSGHEH*HPLSDYSLAVCPKR
Trigger: CCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTATCTGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp CACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTaGAGTTCCTATCCAGGGAAGGGGCTGTACCTTAATCTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: HLPCLVLVPVRYSYL*SSYPGKGLYLNLLH
Trigger: ATGCAGAAGATTAAGGTACAGCCCCTTCCCTGGATAGGAACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp CCCAAAACAGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTaGGGCACAGAATGGATCCTGTGGGTGTTTCTCAGCTGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: PKTVGGNFCPLLQFA*GTEWILWVFLSWLG
Trigger: TCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp AGCTTCCCAAAACAGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTaGCTTTGGGCACAGAATGGATCCTGTGGGTGTTTCTCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: SFPKQLEGISALCSN*LWAQNGSCGCFSAG
Trigger: GCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCAAGCTCAGGGCAATGTaGCCGGGGTGGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIKLRAM*PGWAEG
Trigger: CCCCTCTGCCCACCCCGGTCACATTGCCCTGAGCTT...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGTTTCACGACTATTATaGCTCACAGGGAAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PKHFCCVILANSHTDLVGVSRLL*LTGKLS
Trigger: GCTCAGCTTCCCTGTGAGTCATAATAGTCGTGAAAC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTTTCCAGGATGGAGAATaGCACCATAGAGGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSFQDGE*HHRGLD
Trigger: ATCCAACCCTCTATGGTGGCATTCTCCATCCTGGAA...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAATACACCTGCTACACCTaGCCTTCTCCTTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEYTCYT*PSPSLC
Trigger: GCAAAGGGAAGGAGAAGGGCAGGTGTAGCAGGTGTA...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGGTGGGACCGTGTCCTaGTTCCTGAAATCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SWREFLPFAPICFGHRMDGGTVS*FLKSAP
Trigger: TGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGAGGATGCACAGCATTaGGGAGATGTCAGGGTACTG +
Preference number: 2 (lower is better)
Translates to: SWREFLPFAPICFGHRMDEDAQH*GDVRVL
Trigger: CAGTACCCTGACATCTCCTCAATGCTGTGCATCCTC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTCAAGTGACTATTGGGTaGAATAGACCCGATCATGCA +
Preference number: 2 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSQVTIG*NRPDHA
Trigger: TGCATGATCGGGTCTATTTCACCCAATAGTCACTTG...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGGAGCTATCGGGACATaGACATTTGCACCCACTGTC +
Preference number: 2 (lower is better)
Translates to: SWREFLPFAPICFGHRMDGAIGT*TFAPTV
Trigger: GACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGGCTCTGGCTTGGTTTaGGTTCCCACAGATACATGG +
Preference number: 2 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQGSGLV*VPTDTW
Trigger: CCATGTATCTGTGGGAACTCAAACCAAGCCAGAGCC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAGTTTGTTTGGCTCTGTaGGCTCTGGCTTGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEVCLAL*ALAWFE
Trigger: CTCAAACCAAGCCAGAGCCCACAGAGCCAAACAAAC...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp CCCTTACAGAAGCTTCCCAAAACAGTTGGAGGGAATTTCTGCCCTTaGCTCCAATTTGCTTTGGGCACAGAATGGATCCTGTGGGTGTTT +
Preference number: 2 (lower is better)
Translates to: PLQKLPKTVGGNFCP*LQFALGTEWILWVF
Trigger: AAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGCTTCTGTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTAAAACGGGTGGAGGATaGACAGCATTGAGGAGATGT +
Preference number: 2 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLKTGGG*TALRRC
Trigger: ACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTT...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCATGGGAAATCATCTTTTaGTTTTGGTGGTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAWEIIF*FWWWRE
Trigger: TTCTCTCCACCACCAAAAGCAAAAGATGATTTCCCA...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAATTCTGCAGTGCAATTTaGCACTTGCCTTGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEFCSAI*HLPCLV
Trigger: CACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAA...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TCTGGACTTGCACATGTCTTTAATTTCTGCAGTGCAATTTGGCACTaGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTG +
Preference number: 2 (lower is better)
Translates to: SGLAHVFNFCSAIWH*PCLVLVPVRYSYLL
Trigger: CAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAATTAAAGACATGTGCAAGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCGTAGGAGCTCACAGCTaGGGAAACCAAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIVGAHS*GNQGSG
Trigger: GCCTGAGCCTTGGTTTCCTCAGCTGTGAGCTCCTAC...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAGCTATTCCTATCTTTTaGGTTCCTATCCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEAIPIF*VPIQGR
Trigger: CCTTCCCTGGATAGGAACTCAAAAGATAGGAATAGC...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGGAGATGTCAGGGTACTaGTGTGTGTGTGGACAGGCG +
Preference number: 2 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLEMSGY*CVCGQA
Trigger: CGCCTGTCCACACACACACCAGTACCCTGACATCTC...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCGCCACAGTAAGGCAGTaGCCTTGTGGCTCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIATVRQ*PCGSCP
Trigger: AGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGC...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TTTTCCTCCTTCACAGCAGTAAGATACAATTGGCAACATCTGAACTaGATCGAATCATCCCTTCAGCTCCTTGGCTGCTTCTGGGGACTA +
Preference number: 2 (lower is better)
Translates to: FSSFTAVRYNWQHLN*IESSLQLLGCFWGL
Trigger: TAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGATGATTCGATCAAGTTCAGATGTTGCCAATTGTATCTTACTGCTGTGAAGGAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp ACCTTGAAAGAAAATCTTGCTCCCCTCTGCTTTGATTGTTGCTGTTaGGCCAGCACACTTTGCTCCCGTGTTTCTTCTGGAACCAAACTA +
Preference number: 2 (lower is better)
Translates to: TLKENLAPLCFDCCC*ASTLCSRVSSGTKL
Trigger: TAGTTTGGTTCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCACATGTGTTCTAAAGTaGCTTCGAGGTGATCATTCA +
Preference number: 2 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTTCVLK*LRGDHS
Trigger: TGAATGATCACCTCGAAGTCACTTTAGAACACATGT...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAGTACTGGTGTGTGTGTaGACAGGCGCTCGAGCGTCT +
Preference number: 2 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKVLVCV*TGARAS
Trigger: AGACGCTCGAGCGCCTGTCCACACACACACCAGTAC...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTGATGACTGCAGTGAATaGGAAATCATCTTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGDDCSE*EIIFCF
Trigger: AAAGCAAAAGATGATTTCCCATTCACTGCAGTCATC...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGCCACCATAGAGGGTTaGATGAATGAACATCGTAAG +
Preference number: 2 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQATIEG*MNEHRK
Trigger: CTTACGATGTTCATTCATCCAACCCTCTATGGTGGC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGCTTCCCAAAACAGTTaGAGGGAATTTCTGCCCTTT +
Preference number: 2 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQASQNS*REFLPF
Trigger: AAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp CATTATCCCGGAAGACTTTTCCTCCTTCACAGCAGTAAGATACAATaGGCAACATCTGAACTTGATCGAATCATCCCTTCAGCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: HYPGRLFLLHSSKIQ*ATSELDRIIPSAPW
Trigger: CCAAGGAGCTGAAGGGATGATTCGATCAAGTTCAGATGTTGCCAATTGTATCTTACTGCTGTGAAGGAGGAAAAGTCTTCCGGGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATTTTGGGTCAGTTGGTTaGCTTAATGTAAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: SWREFLPFAPICFGHRMDFGSVG*LNVRTG
Trigger: CCCAGTTCTTACATTAAGTCAACCAACTGACCCAAA...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGCATCGTATGATCACTTaGTATCCTTTGGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQHRMIT*YPLAVL
Trigger: CAGAACTGCCAAAGGATACCAAGTGATCATACGATG...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCGTTCCCACAGATACATaGGTGTGTGGAGCTATCGGG +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIVPTDT*VCGAIG
Trigger: CCCGATAGCTCCACACACCCATGTATCTGTGGGAAC...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp TGGAGAAGATACCCAATAACAAGGGTGATTGGTTCAGGAAAATTATaGGACGGGAAGGAGTTCTGCATTGAGAAGAGGACAGATGGGTTT +
Preference number: 2 (lower is better)
Translates to: WRRYPITRVIGSGKL*DGKEFCIEKRTDGF
Trigger: AAACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAACCAATCACCCTTGTTATTGGGTATCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp AGTGTCATCACCAGTGACTGCCCAAGGTCTAGAGGTACAAAACGATaGCATGTCTACAAAGTAGGACAGTCACTTAATTTACCACCAGTA +
Preference number: 2 (lower is better)
Translates to: SVITSDCPRSRGTKR*HVYKVGQSLNLPPV
Trigger: TACTGGTGGTAAATTAAGTGACTGTCCTACTTTGTAGACATGCAATCGTTTTGTACCTCTAGACCTTGGGCAGTCACTGGTGATGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTAAATTTGTGTTTTCATaGGCCAAAGGTCATAGCACA +
Preference number: 2 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLKFVFS*AKGHST
Trigger: TGTGCTATGACCTTTGGCTCATGAAAACACAAATTT...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCCGGGGGACACACAAGTaGCTATTGGGTGAAATAGAC +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIRGTHK*LLGEID
Trigger: GTCTATTTCACCCAATAGTCACTTGTGTGTCCCCCG...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR TCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCCCAATCCTTGTTCTTTaGGGCAAGGCCTCTTGGATC +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIPILVL*GKASWI
Trigger: GATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGG...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGTCCCATTTCTACACCTaGTACACCTGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VEPSRKLRTELYMISLSLSHFYT*YTCPSP
Trigger: AGGAGAAGGGCAGGTGTAGCAGGTGTAGAAATGGGA...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAAATTTCGCATGCTATTaGATGGGTACACTGAAATAT +
Preference number: 2 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLENFACY*MGTLKY
Trigger: ATATTTCAGTGTACCCATCCAATAGCATGCGAAATT...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR GCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCCTGGCTTGGAAGACTTaGAACTGTACTGATTCAATG +
Preference number: 2 (lower is better)
Translates to: NVNRVCLPFQIIDHILWILAWKT*NCTDSM
Trigger: CATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAG...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 90 bp AATAGACCCGATCATGCAAATCATCGTATGATCACTTGGTATCCTTaGGCAGTTCTGACATTCATTGTCACTAGCACAGATATTAAAATG +
Preference number: 2 (lower is better)
Translates to: NRPDHANHRMITWYP*AVLTFIVTSTDIKM
Trigger: CATTTTAATATCTGTGCTAGTGACAATGAATGTCAGAACTGCCAAAGGATACCAAGTGATCATACGATGATTTGCATGATCGGGTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp GCCCCAGAGGGCGCACCTGGTGTCTACGCCACCGTCTaGCAGGGGTGGTCGCAGTATCCTCTGCCTTCCATC +
Preference number: 3 (lower is better)
Translates to: APEGAPGVYATV*QGWSQYPLPSI
Trigger: GATGGAAGGCAGAGGATACTGCGACCACCCCTGGCAGACGGTGGCGTAGACACCAGGTGCGCCCTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp CGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTaGGCCCCAGAGGGCGCACCTGGTGTCTACGCCACC +
Preference number: 3 (lower is better)
Translates to: RTRLFAADHPLL*APEGAPGVYAT
Trigger: GGTGGCGTAGACACCAGGTGCGCCCTCTGGGGCTCAGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp GGTTGGGGGCAGTGCAGGGATCTCTTTATCCCTCCATaGGGCCTTACTGACCTGGGAGGACGGCCTCGCACC +
Preference number: 3 (lower is better)
Translates to: GWGQCRDLFIPP*GLTDLGGRPRT
Trigger: GGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAGATCCCTGCACTGCCCCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp TGCCACCCAGCCCAACCCGGGGTCAGACCAGTCTCTTaGCTGCACCCCTTGGTGCAGTTCTCAGAGAGCACC +
Preference number: 3 (lower is better)
Translates to: CHPAQPGVRPVS*LHPLVQFSEST
Trigger: GGTGCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAGAGACTGGTCTGACCCCGGGTTGGGCTGGGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GTGCAGGGATCTCTTTATCCCTCCATGCGGCCTTACTaGCCTGGGAGGACGGCCTCGCACCTGACCCCCTCA +
Preference number: 3 (lower is better)
Translates to: VQGSLYPSMRPY*PGRTASHLTPS
Trigger: TGAGGGGGTCAGGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAGATCCCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp CCTAAGGGTGCCTCCATGGCTGGGCACCACCGTGCTTaGCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGC +
Preference number: 3 (lower is better)
Translates to: PKGASMAGHHRA*LRRESTRKGVR
Trigger: GCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAGCACGGTGGTGCCCAGCCATGGAGGCACCCTTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp TGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGTaGGGACAGAGTCCACGCTCCCTTTCAAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: WQGDSSSPVQGQ*GQSPRSLSRCP
Trigger: AGGGCACCTTGAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp AACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTaGTCTGAGCCCCAGAGGGCGCACCTGGTGTCTACG +
Preference number: 3 (lower is better)
Translates to: NIGRDCSQLTIR*SEPQRAHLVST
Trigger: CGTAGACACCAGGTGCGCCCTCTGGGGCTCAGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp GGGATCTCTTTATCCCTCCATGCGGCCTTACTGACCTaGGAGGACGGCCTCGCACCTGACCCCCTCATTGCA +
Preference number: 3 (lower is better)
Translates to: GISLSLHAALLT*EDGLAPDPLIA
Trigger: TGCAATGAGGGGGTCAGGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTaGAATATGAACGGCGCCATTTACATGGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: AGDARRRCTASL*NMNGAIYMEME
Trigger: CTCCATTTCCATGTAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTaGCCATCCGTTGCTCTGAGCCCCAGAGGGCGCACC +
Preference number: 3 (lower is better)
Translates to: DHFLTSDETVRS*PSVALSPRGRT
Trigger: GGTGCGCCCTCTGGGGCTCAGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp GGAAGAAAAACAGAGATACAGAGCACAGCAAACACGTaGCGGGGACGCACGGCGGAGATGCACGGCGTCCCT +
Preference number: 3 (lower is better)
Translates to: GRKTEIQSTANT*RGRTAEMHGVP
Trigger: AGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTTTGCTGTGCTCTGTATCTCTGTTTTTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp ATTGAGTTTCCTGCCGGCTCGTCGGAGCTGCTGTCATaGAAAGAAGCTCAGGGCAATGTGACCGGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: IEFPAGSSELLS*KEAQGNVTGVG
Trigger: GCCCACCCCGGTCACATTGCCCTGAGCTTCTTTCCATGACAGCAGCTCCGACGAGCCGGCAGGAAACTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGGATCTCTGAAAACCTaGAACCAATGGGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFGSLKT*NQWAGP
Trigger: GGGACCTGCCCATTGGTTCAAGGTTTTCAGAGATCC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCAATTTGGCACTTGCCTaGCTTGGTGCTGGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFNLALA*LGAGAC
Trigger: ACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATT...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATaGATAGGGACTCTGCAGGTGAGAGGTGGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: GGTVSCFLKSAP*IGTLQVRGGKG
Trigger: CCCCTTGCCACCTCTCACCTGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp ATCAGCTCCATGAATAGGGACTCTGCAGGTGAGAGGTaGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: ISSMNRDSAGER*QGDSSSPVQGQ
Trigger: CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTCCCTATTCATGGAGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTGAGCCAGCAGGGGCATaGAGTTTCCTGCCGGCTCGT +
Preference number: 3 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGEPAGA*SFLPAR
Trigger: ACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCTC...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCATCGTATGATCACTaGGTATCCTTTGGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGSSYDH*VSFGSS
Trigger: AGAACTGCCAAAGGATACCAAGTGATCATACGATGA...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp ACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATaGACGGCGCCATTTACATGGAAATGGAGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: THGGDARRPCEI*TAPFTWKWSQQ
Trigger: CTGCTGGCTCCATTTCCATGTAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp TCAAACTCTGAGTGTATGGAAGGAGCGACACTGAGCTaGGTGTCTCTCTGCTCTGTCGCCGGCTGCCACCCA +
Preference number: 3 (lower is better)
Translates to: SNSECMEGATLS*VSLCSVAGCHP
Trigger: TGGGTGGCAGCCGGCGACAGAGCAGAGAGACACTCAGCTCAGTGTCGCTCCTTCCATACACTCAGAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGATGGGAAATCATCTTTaGCTTTTGGTGGTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQMGNHL*LLVVER
Trigger: TCTCTCCACCACCAAAAGCAAAAGATGATTTCCCAT...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTaGCCTGGTAGGAGCTCACAGCTGAGGAAACCAAGG +
Preference number: 3 (lower is better)
Translates to: ALLLRHFGQFPH*PGRSSQLRKPR
Trigger: CCTTGGTTTCCTCAGCTGTGAGCTCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CTGAGCAGGCCCTGCATTCTTAATACACTGTCATTTTaGTCTGGCAGAGCTGCCTGTGTGCACTTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: LSRPCILNTLSF*SGRAACVHLGA
Trigger: TGCCCCCAAGTGCACACAGGCAGCTCTGCCAGACCAAAATGACAGTGTATTAAGAATGCAGGGCCTGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CTCCTGTCCTACTGTGGACAAGCCCCTCAAAGTCTCTaGGCTCGCCTCCTTCACTGCAGAGGGTGTAAAATT +
Preference number: 3 (lower is better)
Translates to: LLSYCGQAPQSL*ARLLHCRGCKI
Trigger: AATTTTACACCCTCTGCAGTGAAGGAGGCGAGCCCAGAGACTTTGAGGGGCTTGTCCACAGTAGGACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTCATCCCTTCAGCTCCTaGGCTGCTTCTGGGGACTAT +
Preference number: 3 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSHPFSS*AASGDY
Trigger: ATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGATG...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAGAAAGGCGCCAATCCTaGTTCTTTGAGGCAAGGCCT +
Preference number: 3 (lower is better)
Translates to: LAYEGSLPERESALLTVQERRQS*FFEARP
Trigger: AGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGCTGCCTGTGTGCACTaGGGGGCAAATAAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAAACVH*GANKKV
Trigger: CACTTTCTTATTTGCCCCCAAGTGCACACAGGCAGC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTAATAGGTTCCTTGGCTaGTGTGGGAACGTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSNRFLG*CGNVAP
Trigger: TGGGGCCACGTTCCCACACAAGCCAAGGAACCTATT...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp CAAGCCCCTCAAAGTCTCTGGGCTCGCCTCCTTCACTaGAGAGGGTGTAAAATTAGGCTAAGTGGTCTTCCA +
Preference number: 3 (lower is better)
Translates to: QAPQSLWARLLH*RGCKIRLSGLP
Trigger: TGGAAGACCACTTAGCCTAATTTTACACCCTCTGCAGTGAAGGAGGCGAGCCCAGAGACTTTGAGGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp AAAGGATCAGAAAGCCACAGTAAGGCAGTGGCCTTGTaGCTCCTGTCCTACTGTGGACAAGCCCCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: KGSESHSKAVAL*LLSYCGQAPQS
Trigger: ACTTTGAGGGGCTTGTCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGCTTTCTGATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp AGCAACATAAAGGATCAGAAAGCCACAGTAAGGCAGTaGCCTTGTGGCTCCTGTCCTACTGTGGACAAGCCC +
Preference number: 3 (lower is better)
Translates to: SNIKDQKATVRQ*PCGSCPTVDKP
Trigger: GGGCTTGTCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGCTTTCTGATCCTTTATGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGGAAGGAGTTCTGCATaGAGAAGAGGACAGATGGGT +
Preference number: 3 (lower is better)
Translates to: PKHFCCVILANSHTDLVGGRSSA*RRGQMG
Trigger: ACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTCC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCATTTCTGCAGTGCAATTaGGCACTTGCCTTGCTTGGT +
Preference number: 3 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAFLQCN*ALALLG
Trigger: ACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAA...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTaGGTTCCTATCCAGGGAAGGGGCTGTACCTTAATC +
Preference number: 3 (lower is better)
Translates to: AWCWCLCAIPIF*VPIQGRGCTLI
Trigger: GATTAAGGTACAGCCCCTTCCCTGGATAGGAACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CATTCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTaGAGGATGCACAGCATTGAGGAGATGTCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: HSGCSSGWSKNG*RMHSIEEMSGY
Trigger: GTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAAGAAACAGCAAGTCTTaGCAGGAGTATTGGCACATG +
Preference number: 3 (lower is better)
Translates to: RWDRVLLPEISSMNRDSARNSKS*QEYWHM
Trigger: CATGTGCCAATACTCCTGCAAAGACTTGCTGTTTCT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp GGTGCTCACCCATCCCAATTTCGGGGGACACACAAGTaGCTATTGGGTGAAATAGACCCGATCATGCAAATC +
Preference number: 3 (lower is better)
Translates to: GAHPSQFRGTHK*LLGEIDPIMQI
Trigger: GATTTGCATGATCGGGTCTATTTCACCCAATAGTCACTTGTGTGTCCCCCGAAATTGGGATGGGTGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp AGCTGGCTTGGAAGACTTGCAACTGTACTGATTCAATaGTGGGGTGAAGAGTGTGTGTTTGGTGAGGGCCAC +
Preference number: 3 (lower is better)
Translates to: SWLGRLATVLIQ*WGEECVFGEGH
Trigger: GTGGCCCTCACCAAACACACACTCTTCACCCCATCATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp TACATGGGTGTGTGGAGCTATCGGGACATGAACATTTaGACCCACTGTCTGATTATTCCCTCGCTGTCTGTC +
Preference number: 3 (lower is better)
Translates to: YMGVWSYRDMNI*THCLIIPSLSV
Trigger: GACAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp TGGCTTGGTTTGAGTTCCCACAGATACATGGGTGTGTaGAGCTATCGGGACATGAACATTTGCACCCACTGT +
Preference number: 3 (lower is better)
Translates to: WLGLSSHRYMGV*SYRDMNICTHC
Trigger: ACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTATCTGTGGGAACTCAAACCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp TTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATaGATCCTGTGGGTGTTTCTCAGCTGGCTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: FCPLLQFALGTE*ILWVFLSWLGR
Trigger: TCTTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATAGAGGAATAGGTTCCTaGGCTTGTGTGGGAACGTGG +
Preference number: 3 (lower is better)
Translates to: SWREFLPFAPICFGHRMDRGIGS*ACVGTW
Trigger: CCACGTTCCCACACAAGCCAAGGAACCTATTCCTCT...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp CATGACCTTGAAAGAAAATCTTGCTCCCCTCTGCTTTaGTTGTTGCTGTTTGGCCAGCACACTTTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: HDLERKSCSPLL*LLLFGQHTLLP
Trigger: CGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAAGGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp GTTACAGACAGACCATGTGCAGGCCTTACCCAGCAGTaGAGAAGATACCCAATAACAAGGGTGATTGGTTCA +
Preference number: 3 (lower is better)
Translates to: VTDRPCAGLTQQ*RRYPITRVIGS
Trigger: TGAACCAATCACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTGTCTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CACAGAATGGATCCTGTGGGTGTTTCTCAGCTGGCTTaGAAGACTTGCAACTGTACTGATTCAATGATGGGG +
Preference number: 3 (lower is better)
Translates to: HRMDPVGVSQLA*KTCNCTDSMMG
Trigger: CCCCATCATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp TTGCTCCAATTTGCTTTGGGCACAGAATGGATCCTGTaGGTGTTTCTCAGCTGGCTTGGAAGACTTGCAACT +
Preference number: 3 (lower is better)
Translates to: LLQFALGTEWIL*VFLSWLGRLAT
Trigger: AGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAAAACTGCCTGAAGAATaGAATACATTATCCCGGAAG +
Preference number: 3 (lower is better)
Translates to: PKHFCCVILANSHTDLVGKLPEE*NTLSRK
Trigger: CTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp AGATTAAATAACAGGAAGTTTACACCACAGCAAGGGTaGTCACCCATCCCAATTTCGGGGGACACACAAGTG +
Preference number: 3 (lower is better)
Translates to: RLNNRKFTPQQG*SPIPISGDTQV
Trigger: CACTTGTGTGTCCCCCGAAATTGGGATGGGTGAGCACCCTTGCTGTGGTGTAAACTTCCTGTTATTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp GTCTTTAATTTCTGCAGTGCAATTTGGCACTTGCCTTaGTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTT +
Preference number: 3 (lower is better)
Translates to: VFNFCSAIWHLP*LVLVPVRYSYL
Trigger: AAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAATTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp AAAATCTTGCTCCCCTCTGCTTTGATTGTTGCTGTTTaGCCAGCACACTTTGCTCCCGTGTTTCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: KILLPSALIVAV*PAHFAPVFLLE
Trigger: TTCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCGGAGGATGCACAGCATaGAGGAGATGTCAGGGTACT +
Preference number: 3 (lower is better)
Translates to: STVNLFFNQLINTTEMTCGGCTA*RRCQGT
Trigger: AGTACCCTGACATCTCCTCAATGCTGTGCATCCTCC...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp TGTTTCTCAGCTGGCTTGGAAGACTTGCAACTGTACTaGTTCAATGATGGGGTGAAGAGTGTGTGTTTGGTG +
Preference number: 3 (lower is better)
Translates to: CFSAGLEDLQLY*FNDGVKSVCLV
Trigger: CACCAAACACACACTCTTCACCCCATCATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp TTGAAAGAAAATCTTGCTCCCCTCTGCTTTGATTGTTaGTGTTTGGCCAGCACACTTTGCTCCCGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: LKENLAPLCFDC*CLASTLCSRVS
Trigger: AGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CAGGTTTCCAGGATGGAGAATGCCACCATAGAGGGTTaGATGAATGAACATCGTAAGTTCACTGTCATCAAG +
Preference number: 3 (lower is better)
Translates to: QVSRMENATIEG*MNEHRKFTVIK
Trigger: CTTGATGACAGTGAACTTACGATGTTCATTCATCCAACCCTCTATGGTGGCATTCTCCATCCTGGAAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp CCAGCAGTGGAGAAGATACCCAATAACAAGGGTGATTaGTTCAGGAAAATTATTGGACGGGAAGGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: PAVEKIPNNKGD*FRKIIGREGVL
Trigger: CAGAACTCCTTCCCGTCCAATAATTTTCCTGAACCAATCACCCTTGTTATTGGGTATCTTCTCCACTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCCAATCTACTGAATTTTaGCAAAGACTATGGGTTCCT +
Preference number: 3 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTQSTEF*QRLWVP
Trigger: AGGAACCCATAGTCTTTGCAAAAATTCAGTAGATTG...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp ATCCCAATTTCGGGGGACACACAAGTGACTATTGGGTaGAATAGACCCGATCATGCAAATCATCGTATGATC +
Preference number: 3 (lower is better)
Translates to: IPISGDTQVTIG*NRPDHANHRMI
Trigger: GATCATACGATGATTTGCATGATCGGGTCTATTTCACCCAATAGTCACTTGTGTGTCCCCCGAAATTGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp CTCTGCTTTGATTGTTGCTGTTTGGCCAGCACACTTTaGTCCCGTGTTTCTTCTGGAACCAAACTAACATTA +
Preference number: 3 (lower is better)
Translates to: LCFDCCCLASTL*SRVSSGTKLTL
Trigger: TAATGTTAGTTTGGTTCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp CTTATCATGACCTTGAAAGAAAATCTTGCTCCCCTCTaGTTTGATTGTTGCTGTTTGGCCAGCACACTTTGC +
Preference number: 3 (lower is better)
Translates to: LIMTLKENLAPL*FDCCCLASTLC
Trigger: GCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAAGGTCATGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp TTTGGTGAGGGCCACATGAATTGCCTAATAGTCTCATaGAGCAACATAAAGGATCAGAAAGCCACAGTAAGG +
Preference number: 3 (lower is better)
Translates to: FGEGHMNCLIVS*SNIKDQKATVR
Trigger: CCTTACTGTGGCTTTCTGATCCTTTATGTTGCTTCATGAGACTATTAGGCAATTCATGTGGCCCTCACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp CTGAACTTGATCGAATCATCCCTTCAGCTCCTTGGCTaGTTCTGGGGACTATTTCAATCTACTGAATTTTTG +
Preference number: 3 (lower is better)
Translates to: LNLIESSLQLLG*FWGLFQSTEFL
Trigger: CAAAAATTCAGTAGATTGAAATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGATGATTCGATCAAGTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGCTGGCAATGTTAAATTaGTGTTTTCATGAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQLAMLN*CFHEPK
Trigger: CTTTGGCTCATGAAAACACAAATTTAACATTGCCAG...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGTTGCTCCAATTTGCTTaGGGCACAGAATGGATCCTG +
Preference number: 3 (lower is better)
Translates to: VEPSRKLRTELYMISLSLLLQFA*GTEWIL
Trigger: CAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAA...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp ATCAAGTTTCACGACTATTATGACTCACAGGGAAGCTaGGCAGGCCCTGCATTCTTAATACACTGTCATTTT +
Preference number: 3 (lower is better)
Translates to: IKFHDYYDSQGS*AGPAFLIHCHF
Trigger: AAAATGACAGTGTATTAAGAATGCAGGGCCTGCTCAGCTTCCCTGTGAGTCATAATAGTCGTGAAACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp ATTGGTTCAGGAAAATTATTGGACGGGAAGGAGTTCTaGATTGAGAAGAGGACAGATGGGTTTGTGATTTTC +
Preference number: 3 (lower is better)
Translates to: IGSGKLLDGKEF*IEKRTDGFVIF
Trigger: GAAAATCACAAACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR-3UTR CAA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGATCACTTGGTATCCTTaGGCAGTTCTGACATTCATT +
Preference number: 3 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQITWYP*AVLTFI
Trigger: AATGAATGTCAGAACTGCCAAAGGATACCAAGTGAT...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp CGTCCTAATACTACGAAAATGACACTTACATTTCGTTaGCAATCTTTAGTCTCCAAAGCACTTCTGCTGCGT +
Preference number: 3 (lower is better)
Translates to: RPNTTKMTLTFR*QSLVSKALLLR
Trigger: ACGCAGCAGAAGTGCTTTGGAGACTAAAGATTGTCAACGAAATGTAAGTGTCATTTTCGTAGTATTAGGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CCA 72 bp AATAGACCCGATCATGCAAATCATCGTATGATCACTTaGTATCCTTTGGCAGTTCTGACATTCATTGTCACT +
Preference number: 3 (lower is better)
Translates to: NRPDHANHRMIT*YPLAVLTFIVT
Trigger: AGTGACAATGAATGTCAGAACTGCCAAAGGATACCAAGTGATCATACGATGATTTGCATGATCGGGTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR GCA 72 bp TACTTATTGCTTTCCCGAATGTCAACAGAGTTTGTTTaGCTTTCCAGATTATTGACCACATTCTGTGGATCA +
Preference number: 3 (lower is better)
Translates to: YLLLSRMSTEFV*LSRLLTTFCGS
Trigger: TGATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATTCGGGAAAGCAATAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp CACCATCTCAACATGTGTTCTAAAGTGACTTCGAGGTaGTCATTCATTTATAATCGAAACATAATCCGAACG +
Preference number: 3 (lower is better)
Translates to: HHLNMCSKVTSR*SFIYNRNIIRT
Trigger: CGTTCGGATTATGTTTCGATTATAAATGAATGATCACCTCGAAGTCACTTTAGAACACATGTTGAGATGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR TCA 72 bp CTGGGAAATGTCACCATCTCAACATGTGTTCTAAAGTaGCTTCGAGGTGATCATTCATTTATAATCGAAACA +
Preference number: 3 (lower is better)
Translates to: LGNVTISTCVLK*LRGDHSFIIET
Trigger: TGTTTCGATTATAAATGAATGATCACCTCGAAGTCACTTTAGAACACATGTTGAGATGGTGACATTTCCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGACCAGCCGCGCGGCGTaGGCAGCTCCATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQTSRAA*AAPCRW
Trigger: CCATCTGCATGGAGCTGCTCACGCCGCGCGGCTGGT...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGTCCGTCCCTGGCCCTTaGCCAGGCTGGCTGCGAACT +
Preference number: 4 (lower is better)
Translates to: ATHRASSTRQARLSGGTVSVPGP*PGWLRT
Trigger: AGTTCGCAGCCAGCCTGGTCAAGGGCCAGGGACGGA...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCGGACGGCCTCGCACCTaGCCCCCTCATTGCACTCTA +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLGRPRT*PPHCTL
Trigger: TAGAGTGCAATGAGGGGGTCAGGTGCGAGGCCGTCC...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAAGACCATCCGTTGCTCTaGGCCCCAGAGGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYEDHPLL*APEGAP
Trigger: AGGTGCGCCCTCTGGGGCTCAGAGCAACGGATGGTC...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGATGCTCTGTCGCCGGCTaGCACCCAGCCCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGCSVAG*HPAQPG
Trigger: CCCGGGTTGGGCTGGGTGGCAGCCGGCGACAGAGCA...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGGGCACCACCGTGCTTaGCTACGAAGGGAGTCTACC +
Preference number: 4 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQGHHRA*LRREST
Trigger: GGTAGACTCCCTTCGTAGGCAAGCACGGTGGTGCCC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCAGACACAGGGTGAATTaGCGGTTGGGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLRHRVN*RLGAVQ
Trigger: CTGCACTGCCCCCAACCGCCAATTCACCCTGTGTCT...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCGAGGATGCACAGCATTaGGGAGATGTCAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGEDAQH*GDVRVL
Trigger: CAGTACCCTGACATCTCCTCAATGCTGTGCATCCTC...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGTGCACGGCGTCCCTGTaGAATATGAACGGCGCCATT +
Preference number: 4 (lower is better)
Translates to: ATHRASSTRQARLSGGTVCTASL*NMNGAI
Trigger: AATGGCGCCGTTCATATTTCACAGGGACGCCGTGCA...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCGACTCACAGGGAAGCTaGGCAGGCCCTGCATTCTTA +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLDSQGS*AGPAFL
Trigger: TAAGAATGCAGGGCCTGCTCAGCTTCCCTGTGAGTC...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGGCTGCACCCCTTGGTaGAGTTCTCAGAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFGCTPW*SSQRAP
Trigger: CGGTGCTCTCTGAGAACTGCACCAAGGGGTGCAGCC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCGAGATGTCAGGGTACTaGTGTGTGTGTGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLEMSGY*CVCGQA
Trigger: CGCCTGTCCACACACACACCAGTACCCTGACATCTC...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGCCCCTCAAAGTCTCTaGGCTCGCCTCCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFAPQSL*ARLLHC
Trigger: GCAGTGAAGGAGGCGAGCCCAGAGACTTTGAGGGGC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGGCCAATTCCCACACTaGCCTGGTAGGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFGQFPH*PGRSSQ
Trigger: CTGTGAGCTCCTACCAGGTCAGTGTGGGAATTGGCC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCACACCACAGCAAGGGTaGTCACCCATCCCAATTTCG +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLTPQQG*SPIPIS
Trigger: CGAAATTGGGATGGGTGAGCACCCTTGCTGTGGTGT...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCCGGACACGGGCGGGGTaGCCCAACCATATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFRTRAG*PNHIFH
Trigger: ATGAAAAATATGGTTGGGTCACCCCGCCCGTGTCCG...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTCCCGTTCAGGGCCAGTaGGGACAGAGTCCACGCTCC +
Preference number: 4 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSPVQGQ*GQSPRS
Trigger: GGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGG...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAAGTCTCCTTCATGTCCTaGCACAGCACCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYEVSFMS*HSTESL
Trigger: CAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGAC...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAGCAGCTCCATGCAGATaGCGCCGCCGTCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQAAPCR*RRRPAR
Trigger: ACGTGCTGGACGGCGGCGCCATCTGCATGGAGCTGC...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAGTACTGGTGTGTGTGTaGACAGGCGCTCGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLVLVCV*TGARAS
Trigger: AGACGCTCGAGCGCCTGTCCACACACACACCAGTAC...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGATCCCTTCAGCTCCTTaGCTGCTTCTGGGGACTATT +
Preference number: 4 (lower is better)
Translates to: ATHRASSTRQARLSGGTVIPSAP*LLLGTI
Trigger: AATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGAT...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAGTTCCTTGGCTTGTGTaGGAACGTGGCCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLVPWLV*ERGPRL
Trigger: AAGCCTGGGGCCACGTTCCCACACAAGCCAAGGAAC...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCGCTTTGGGCACAGAATaGATCCTGTGGGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLALGTE*ILWVFL
Trigger: GAGAAACACCCACAGGATCCATTCTGTGCCCAAAGC...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAAGCCAGCAGGGGCATTaGGTTTCCTGCCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQSQQGH*VSCRLV
Trigger: GACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCT...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAAGCACAGCAAACACGTaGCGGGGACGCACGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGSTANT*RGRTAE
Trigger: CTCCGCCGTGCGTCCCCGGCACGTGTTTGCTGTGCT...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGAGCGTCTACTGCACGTaGCAGACATCAGCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: IIATHRASSTRQARLSGGSVYCT*QTSAVG
Trigger: TCCGACGGCTGATGTCTGCCACGTGCAGTAGACGCT...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCGCACTGGTTTATCTGTaGACAGCAGCACACCACAAA +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLALVYL*TAAHHK
Trigger: TTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGC...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CGGCGCCATTTACATGGAAATGGAGCCAGCAGGGGCATTGAGTTTCCTGCCGGCAAGGCAGTGGCCTTGTaGCTCCTGTCCTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: RRHLHGNGASRGIEFPAGKAVAL*LLSYCG
Trigger: TCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTT...GCCGGCAGGAAACTCAATGCCCCTGCTGGCTCCATTTCCATGTAAATGGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp GGCGCCATTTACATGGAAATGGAGCCAGCAGGGGCATaGAGTTTCCTGCCGGCTCGTCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GAIYMEMEPAGA*SFLPARRSCCH
Trigger: ATGACAGCAGCTCCGACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCTCCATTTCCATGTAAATGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp CTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTGGCTaGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LAVCPKRNRFLG*CGNVAPGFRPL
Trigger: GAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCCAAGGAACCTATTCCTCTTTGGACAGACAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTCTTGACCAGGCTGGCTaGGAACTGGCGCATGACGGC +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGLDQAG*ELAHDG
Trigger: GCCGTCATGCGCCAGTTCGCAGCCAGCCTGGTCAAG...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAACGCTCGAGCGTCTACTaGACGTGGCAGACATCAGCC +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQRSSVY*TWQTSA
Trigger: GGCTGATGTCTGCCACGTGCAGTAGACGCTCGAGCG...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCATTGGTCTGGCAGAGCTaGCTGTGTGCACTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RWDRVLLPEISSMNRDSALVWQS*LCALGG
Trigger: GCCCCCAAGTGCACACAGGCAGCTCTGCCAGACCAA...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTGGCTGGGCACCACCGTaGTTGCCTACGAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGGWAPP*LPTKGV
Trigger: GACTCCCTTCGTAGGCAAGCACGGTGGTGCCCAGCC...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCAGGCTGGCTGCGAACTaGCGCATGACGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTRLAAN*RMTAST
Trigger: CGTGGAGGCCGTCATGCGCCAGTTCGCAGCCAGCCT...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCATAGCCCACAATGACTaGATCCTTGAGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLIAHND*ILEAVY
Trigger: ATACACTGCCTCAAGGATCCAGTCATTGTGGGCTAT...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTGTCAGACCAGTCTCTTaGCTGCACCCCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRVRPVS*LHPLVQ
Trigger: CTGCACCAAGGGGTGCAGCCAAGAGACTGGTCTGAC...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGCTTGTGTGGGAACGTaGCCCCAGGCTTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGACVGT*PQASGL
Trigger: GAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAAAGCTCAGGGCAATGTaGCCGGGGTGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEKLRAM*PGWAEG
Trigger: CCCCTCTGCCCACCCCGGTCACATTGCCCTGAGCTT...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAAGAAGGAGTTCTGCATTaGGAAGAGGACAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYEEGVLH*EEDRWV
Trigger: AACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTC...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCTTTGGGTCAGTTGGTTaGCTTAATGTAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LVWERGPRLQASPSHPGLFGSVG*LNVRTG
Trigger: CCCAGTTCTTACATTAAGTCAACCAACTGACCCAAA...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGACTTGCAACTGTACTaGTTCAATGATGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQDLQLY*FNDGVK
Trigger: CTTCACCCCATCATTGAATCAGTACAGTTGCAAGTC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTGTCTACGCCACCGTCTaGCAGGGGTGGTCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSVYATV*QGWSQY
Trigger: ATACTGCGACCACCCCTGGCAGACGGTGGCGTAGAC...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGCTTGCTTGGTGCTGGTaGCTGTGCGCTATTCCTATC +
Preference number: 4 (lower is better)
Translates to: IIATHRASSTRQARLSGGLAWCW*LCAIPI
Trigger: GATAGGAATAGCGCACAGGCACCAGCACCAAGCAAG...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTATCCCATTTCTACACCTaGTACACCTGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLSHFYT*YTCPSP
Trigger: AGGAGAAGGGCAGGTGTAGCAGGTGTAGAAATGGGA...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CGGCGCCATTTACATGGAAATGGAGCCAGCAGGGGCATTGAGTTTCCTGCCGGCGTCATCACCAGTGACTaGCCAAGGTCTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: RRHLHGNGASRGIEFPAGVITSD*PRSRGT
Trigger: TGTACCTCTAGACCTTGGGCAGTCACTGGTGATGAC...GCCGGCAGGAAACTCAATGCCCCTGCTGGCTCCATTTCCATGTAAATGGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTCTACAGATCCGTCCCTaGCCCTTGACCAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGLQIRP*PLTRLA
Trigger: AGCCAGCCTGGTCAAGGGCCAGGGACGGATCTGTAG...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGACTAAGGGTGCCTCCATaGCTGGGCACCACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGLRVPP*LGTTVL
Trigger: AAGCACGGTGGTGCCCAGCCATGGAGGCACCCTTAG...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTCAAGGCTCAGGCAGGTaGAGTGACTGGCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSQGSGR*SDWPGL
Trigger: TAACCCTGGCCAGTCACTCCACCTGCCTGAGCCTTG...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGATGCCTTGCTTGGTGCTaGTGCCTGTGCGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGCLAWC*CLCAIP
Trigger: AGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCA...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATCTGCGAACTGGCGCATaGCGGCCTCCACGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SWREFLPFAPICFGHRMDLRTGA*RPPRCR
Trigger: CCTACACCGTGGAGGCCGTCATGCGCCAGTTCGCAG...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAGGTGGGACCGTGTCCTaGTTCCTGAAATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQGGTVS*FLKSAP
Trigger: TGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACC...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACTCTGCTTTGATTGTTaGTGTTTGGCCAGCACACTT +
Preference number: 4 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYELCFDC*CLASTL
Trigger: AAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAG...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATCCCAGAGGGCGCACCTaGTGTCTACGCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SWREFLPFAPICFGHRMDPRGRT*CLRHRL
Trigger: CAGACGGTGGCGTAGACACCAGGTGCGCCCTCTGGG...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTGCCACAGTAAGGCAGTaGCCTTGTGGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSATVRQ*PCGSCP
Trigger: AGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGC...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCGTTTCTCAGCTGGCTTaGAAGACTTGCAACTGTACT +
Preference number: 4 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFVSQLA*KTCNCT
Trigger: AGTACAGTTGCAAGTCTTCCAAGCCAGCTGAGAAAC...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGCGGCCTTACTGACCTaGGAGGACGGCCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: SWREFLPFAPICFGHRMDAALLT*EDGLAP
Trigger: AGGTGCGAGGCCGTCCTCCCAGGTCAGTAAGGCCGC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp CTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATaGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LAGVKTGGGCTA*RRCQGTGVCVD
Trigger: GTCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp CTCCTGGCTTTAATTCTGCGAGAGACACAGGGTGAATaGGCGGTTGGGGGCAGTGCAGGGATCTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: LLALILRETQGE*AVGGSAGISLS
Trigger: GGATAAAGAGATCCCTGCACTGCCCCCAACCGCCAATTCACCCTGTGTCTCTCGCAGAATTAAAGCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGAATGGGCAGCCCTGCTaGAAGGCGCCAATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIENGQPC*KAPILV
Trigger: AACAAGGATTGGCGCCTTTCAGCAGGGCTGCCCATT...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTGGAGCTATCGGGACATaGACATTTGCACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSGAIGT*TFAPTV
Trigger: GACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCC...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGGCTCTGGCTTGGTTTaGGTTCCCACAGATACATGG +
Preference number: 4 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAGSGLV*VPTDTW
Trigger: CCATGTATCTGTGGGAACTCAAACCAAGCCAGAGCC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGCGAGAGACACAGGGTaGATTGGCGGTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQARDTG*IGGWGQ
Trigger: CTGCCCCCAACCGCCAATTCACCCTGTGTCTCTCGC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGACCAGTCTCTTGGCTaGACCCCTTGGTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGDQSLG*TPWCSS
Trigger: AGAACTGCACCAAGGGGTGCAGCCAAGAGACTGGTC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGATTGGCCAGCACACTTTaGTCCCGTGTTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGLASTL*SRVSSG
Trigger: TCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAA...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGTGGAGTAAAAACGGGTaGAGGATGCACAGCATTGAG +
Preference number: 4 (lower is better)
Translates to: IIATHRASSTRQARLSGGWSKNG*RMHSIE
Trigger: CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCA...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGATCGGAGCTGCTGTCATaGAAAGAAGCTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGSELLS*KEAQGN
Trigger: ATTGCCCTGAGCTTCTTTCCATGACAGCAGCTCCGA...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGTTCCCACAGATACATaGGTGTGTGGAGCTATCGGG +
Preference number: 4 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAVPTDT*VCGAIG
Trigger: CCCGATAGCTCCACACACCCATGTATCTGTGGGAAC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTATTGACCACATTCTGTaGATCAGACAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSIDHIL*IRQALG
Trigger: GCCCAGGGCCTGTCTGATCCACAGAATGTGGTCAAT...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp CATAAAGGATCAGAAAGCCACAGTAAGGCAGTGGCCTaGTGGCTCCTGTCCTACTGTGGACAAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: HKGSESHSKAVA*WLLSYCGQAPQ
Trigger: TTGAGGGGCTTGTCCACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACTGTGGCTTTCTGATCCTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCCCTGCAGCTCCTTCATaGGCCGCCGGCTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCPAAPS*AAGCAP
Trigger: AGGTGCGCAGCCGGCGGCTCATGAAGGAGCTGCAGG...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAACCAATCCTTGTTCTTTaGGGCAAGGCCTCTTGGATC +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQPILVL*GKASWI
Trigger: GATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGG...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CGGCGCCATTTACATGGAAATGGAGCCAGCAGGGGCATTGAGTTTCCTGCCGGCAGAAAAATCAAACTCTaGGTGTATGGAAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: RRHLHGNGASRGIEFPAGRKIKL*VYGRSD
Trigger: GTCGCTCCTTCCATACACTCAGAGTTTGATTTTTCT...GCCGGCAGGAAACTCAATGCCCCTGCTGGCTCCATTTCCATGTAAATGGCGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCTCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTSLSTW*SFTFQS
Trigger: CGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGA...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTCTTCAGCTCCTTGGCTaGTTCTGGGGACTATTTCAA +
Preference number: 4 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRLQLLG*FWGLFQ
Trigger: TTGAAATAGTCCCCAGAAGCAGCCAAGGAGCTGAAG...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGATACAGACAGACCATGTaGAGGCCTTACCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGYRQTM*RPYPAV
Trigger: CACTGCTGGGTAAGGCCTGCACATGGTCTGTCTGTA...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTACTTGCCTTGCTTGGTaGTGGTGCCTGTGCGCTATT +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGTCLAW*WCLCAI
Trigger: AATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGT...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGTACACCTGCTACACCTaGCCTTCTCCTTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEYTCYT*PSPSLC
Trigger: GCAAAGGGAAGGAGAAGGGCAGGTGTAGCAGGTGTA...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAGCTCGCCTCCTTCACTaGAGAGGGTGTAAAATTAGG +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQARLLH*RGCKIR
Trigger: CCTAATTTTACACCCTCTGCAGTGAAGGAGGCGAGC...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAAATCTTGCTCCCCTCTaGTTTGATTGTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLNLAPL*FDCCCL
Trigger: CAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATT...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGAATACACTGTCATTTTaGTCTGGCAGAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IIATHRASSTRQARLSGGNTLSF*SGRAAC
Trigger: ACAGGCAGCTCTGCCAGACCAAAATGACAGTGTATT...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTCTTTGCAGGAGTATTaGCACATGTGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRSLQEY*HMCVCV
Trigger: CACACACACGCACATGTGCCAATACTCCTGCAAAGA...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGACAAGTGACTATTGGGTaGAATAGACCCGATCATGCA +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGQVTIG*NRPDHA
Trigger: TGCATGATCGGGTCTATTTCACCCAATAGTCACTTG...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGAGCTATTCCTATCTTTTaGGTTCCTATCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGAIPIF*VPIQGR
Trigger: CCTTCCCTGGATAGGAACTCAAAAGATAGGAATAGC...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCTCCATGCGGCCTTACTaGCCTGGGAGGACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCSMRPY*PGRTAS
Trigger: CGAGGCCGTCCTCCCAGGTCAGTAAGGCCGCATGGA...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCATTCCAGGATGGAGAATaGCACCATAGAGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAFQDGE*HHRGLD
Trigger: ATCCAACCCTCTATGGTGGCATTCTCCATCCTGGAA...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCATTTGGCACTTGCCTTaGTTGGTGCTGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTIWHLP*LVLVPV
Trigger: CACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAAT...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGCATCGTATGATCACTTaGTATCCTTTGGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: IIATHRASSTRQARLSGGHRMIT*YPLAVL
Trigger: CAGAACTGCCAAAGGATACCAAGTGATCATACGATG...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGCTGCCTGTGTGCACTTaGGGGCAAATAAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIELPVCT*GQIRKW
Trigger: CCACTTTCTTATTTGCCCCCAAGTGCACACAGGCAG...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGGGGTGCCTCCATGGCTaGGCACCACCGTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQGCLHG*APPCLP
Trigger: AGGCAAGCACGGTGGTGCCCAGCCATGGAGGCACCC...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAATTCTGCAGTGCAATTTaGCACTTGCCTTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQFCSAI*HLPCLV
Trigger: CACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAA...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGATCTCAGAGAGCACCGTaGACCTGTTTTTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGSQRAP*TCFSIS
Trigger: GCTGATTGAAAAACAGGTTCACGGTGCTCTCTGAGA...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCTTTGCACCCACTGTCTaGTTATTCCCTCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTFAPTV*LFPRCL
Trigger: CAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAA...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCTTAAGAGGAGAATGCTaGGTGAGTGGAGAGATGGCC +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTLRGEC*VSGEMA
Trigger: GGCCATCTCTCCACTCACTCAGCATTCTCCTCTTAA...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQRRAMS*SSFMSR
Trigger: GCGGCTCATGAAGGAGCTGCAGGACATCGCGCGCCT...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAACTCCTTGGCTGCTTCTaGGGACTATTTCAATCTACT +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQLLGCF*GLFQST
Trigger: AGTAGATTGAAATAGTCCCCAGAAGCAGCCAAGGAG...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGAAAACCTTGAACCAATaGGCAGGTCCCCAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEKTLNQ*AGPQVD
Trigger: GTCTACTTGGGGACCTGCCCATTGGTTCAAGGTTTT...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTGGCCTTACCCAGCAGTaGAGAAGATACCCAATAACA +
Preference number: 4 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSGLTQQ*RRYPIT
Trigger: TGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCC...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCCCCTTTGCCCAGCCATaGCTCAAACCTGATTTACTC +
Preference number: 4 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTPFAQP*LKPDLL
Trigger: GAGTAAATCAGGTTTGAGCCATGGCTGGGCAAAGGG...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp GCACATGTCTTTAATTTCTGCAGTGCAATTTGGCACTaGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCC +
Preference number: 4 (lower is better)
Translates to: AHVFNFCSAIWH*PCLVLVPVRYS
Trigger: GGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAATTAAAGACATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAACTCATTTCTGGTACCTaGCTTAGAACGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLELISGT*LRTLLW
Trigger: CCAGAGCAGCGTTCTAAGTCAGGTACCAGAAATGAG...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGCTCAGGCAGGTGGAGTaGCTGGCCAGGGTTACATGG +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLLRQVE*LARVTW
Trigger: CCATGTAACCCTGGCCAGTCACTCCACCTGCCTGAG...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTCTGAAATCAGCTCCATaGATAGGGACTCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLLKSAP*IGTLQV
Trigger: CACCTGCAGAGTCCCTATTCATGGAGCTGATTTCAG...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGGCCTTTCCAGATTATTaGCCACATTCTGTGGATCAG +
Preference number: 4 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEAFPDY*PHSVDQ
Trigger: CTGATCCACAGAATGTGGTCAATAATCTGGAAAGGC...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CCATCTAATGGCACTGGTTTATCTGTGGACAGCAGCACACCACAAATCAGCATCGGTCGCAGTATCCTCTaGCTTCCATCTAATGGCACT +
Preference number: 4 (lower is better)
Translates to: PSNGTGLSVDSSTPQISIGRSIL*LPSNGT
Trigger: AGTGCCATTAGATGGAAGGCAGAGGATACTGCGACC...GATGCTGATTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGCCATTAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGCAGCTGACCATCCGTTaGTCTGAGCCCCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VEPSRKLRTELYMISLSLQLTIR*SEPQRA
Trigger: CGCCCTCTGGGGCTCAGAGCAACGGATGGTCAGCTG...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGGGAAATCATCTTTTaGTTTTGGTGGTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRWEIIF*FWWWRE
Trigger: TTCTCTCCACCACCAAAAGCAAAAGATGATTTCCCA...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAACGGGACATGAACATTTaGACCCACTGTCTGATTATT +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQRDMNI*THCLII
Trigger: AATAATCAGACAGTGGGTGCAAATGTTCATGTCCCG...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGGATGCAGTTCTGGCTaGAGTAAAAACGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SWREFLPFAPICFGHRMDGCSSG*SKNGWR
Trigger: CCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CCATCTAATGGCACTGGTTTATCTGTGGACAGCAGCACACCACAAATCAGCATCACTGTCATTTTGGTCTaGCAGAGCTGCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PSNGTGLSVDSSTPQISITVILV*QSCLCA
Trigger: TGCACACAGGCAGCTCTGCCAGACCAAAATGACAGT...GATGCTGATTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGCCATTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTAGAATGCTGAGTGAGTaGAGAGATGGCCAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGRMLSE*RDGQLV
Trigger: AACTAACTGGCCATCTCTCCACTCACTCAGCATTCT...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp ATACATGGGTGTGTGGAGCTATCGGGACATGAACATTaGCACCCACTGTCTGATTATTCCCTCGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: IHGCVELSGHEH*HPLSDYSLAVC
Trigger: ACAGACAGCGAGGGAATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGATAGCTCCACACACCCATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp GAAAATCTTGCTCCCCTCTGCTTTGATTGTTGCTGTTaGGCCAGCACACTTTGCTCCCGTGTTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ENLAPLCFDCCC*ASTLCSRVSSG
Trigger: TCCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGGAGACTGTTCGCAGCTaGCCATCCGTTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLETVRS*PSVALS
Trigger: GCTCAGAGCAACGGATGGTCAGCTGCGAACAGTCTC...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAGCTAATAAACACTACTaGAATGACCTGCCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQANKHY*NDLPLD
Trigger: ATCCAAAGGCAGGTCATTTCAGTAGTGTTTATTAGC...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCGGAGCGACACTGAGCTaGGTGTCTCTCTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCGATLS*VSLCSV
Trigger: GACAGAGCAGAGAGACACTCAGCTCAGTGTCGCTCC...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAGGACAGATGGGTTTGTaGTTTTCTGTTTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGGQMGL*FSVCLA
Trigger: AGCCAAACAAACAGAAAATCACAAACCCATCTGTCC...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAAAAACGGGTGGAGGATaGACAGCATTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEKTGGG*TALRRC
Trigger: ACATCTCCTCAATGCTGTGCATCCTCCACCCGTTTT...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGCCGGCTCGTCGGAGCTaGTGTCATGGAAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQPARRS*CHGKKL
Trigger: GAGCTTCTTTCCATGACAGCAGCTCCGACGAGCCGG...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAAAATGAGTCAGATGACTaGAGTGAATGGGAAATCATC +
Preference number: 4 (lower is better)
Translates to: LAYEGSLPERESALLTVQNESDD*SEWEII
Trigger: GATGATTTCCCATTCACTGCAGTCATCTGACTCATT...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTGAAACAGCAAGTCTTTaGAGGAGTATTGGCACATGT +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGETASL*RSIGTC
Trigger: ACATGTGCCAATACTCCTGCAAAGACTTGCTGTTTC...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGGGCGGTTGGGGGCAGTaGAGGGATCTCTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQGGWGQ*RDLFIP
Trigger: AGGGATAAAGAGATCCCTGCACTGCCCCCAACCGCC...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCACCGTCTGCCAGGGGTaGTCGCAGTATCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NVNRVCLPFQIIDHILWITVCQG*SQYPLP
Trigger: AGGCAGAGGATACTGCGACCACCCCTGGCAGACGGT...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTGTTCAGGAAAATTATTaGACGGGAAGGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSVQENY*TGRSSA
Trigger: TGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAAC...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTACAGAATGGATCCTGTaGGTGTTTCTCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLTEWIL*VFLSWL
Trigger: AAGCCAGCTGAGAAACACCCACAGGATCCATTCTGT...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAACATGTGTTCTAAAGTaGCTTCGAGGTGATCATTCA +
Preference number: 4 (lower is better)
Translates to: PKHFCCVILANSHTDLVGTCVLK*LRGDHS
Trigger: TGAATGATCACCTCGAAGTCACTTTAGAACACATGT...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAATTGGATGGGTACACTaGAATATAATTGCTACACAC +
Preference number: 4 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAIGWVH*NIIATH
Trigger: GTGTGTAGCAATTATATTTCAGTGTACCCATCCAAT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAACTGTACTGATTCAATaGTGGGGTGAAGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLETVLIQ*WGEECV
Trigger: CACACACTCTTCACCCCATCATTGAATCAGTACAGT...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGTACAGTCCCATAGGCTaGGCTCCAAGCCCCTTACAG +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLYSPIG*APSPLQ
Trigger: CTGTAAGGGGCTTGGAGCTCAGCCTATGGGACTGTA...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGTCTGCAGGTGAGAGGTaGCAAGGGGACTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQSAGER*QGDSSS
Trigger: AGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGA...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CCATCTAATGGCACTGGTTTATCTGTGGACAGCAGCACACCACAAATCAGCATCGCTTCCCAAAACAGTTaGAGGGAATTTCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PSNGTGLSVDSSTPQISIASQNS*REFLPF
Trigger: AAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGC...GATGCTGATTTGTGGTGTGCTGCTGTCCACAGATAAACCAGTGCCATTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTCTCCCGTGTTTCTTCTaGAACCAAACTAACATTACT +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGLPCFF*NQTNIT
Trigger: AGTAATGTTAGTTTGGTTCCAGAAGAAACACGGGAG...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp AAGCTTCCCAAAACAGTTGGAGGGAATTTCTGCCCTTaGCTCCAATTTGCTTTGGGCACAGAATGGATCCTG +
Preference number: 4 (lower is better)
Translates to: KLPKTVGGNFCP*LQFALGTEWIL
Trigger: CAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACTGTTTTGGGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp GACGGCCTCGCACCTGACCCCCTCATTGCACTCTATTaGTCTAGCCTTATCATGACCTTGAAAGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: DGLAPDPLIALY*SSLIMTLKENL
Trigger: AAGATTTTCTTTCAAGGTCATGATAAGGCTAGACAAATAGAGTGCAATGAGGGGGTCAGGTGCGAGGCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAGTAGGAGCTCACAGCTaGGGAAACCAAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKVGAHS*GNQGSG
Trigger: GCCTGAGCCTTGGTTTCCTCAGCTGTGAGCTCCTAC...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAGAACAGAGCTGTACATaGTTTCACTGTCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEEQSCT*FHCLWR
Trigger: TCTCCAAAGACAGTGAAATCATGTACAGCTCTGTTC...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGGCAGAGCTGCCTGTGTaGACTTGGGGGCAAATAAGA +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLAELPV*TWGQIR
Trigger: TCTTATTTGCCCCCAAGTGCACACAGGCAGCTCTGC...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTCTGGCTTGGAAGACTTaGAACTGTACTGATTCAATG +
Preference number: 4 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLLAWKT*NCTDSM
Trigger: CATTGAATCAGTACAGTTGCAAGTCTTCCAAGCCAG...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGTTGGAGGGAATTTCTaGCCTTTGCTCCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQVGGNF*PLLQFA
Trigger: AGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAAC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp CAGACCATGTGCAGGCCTTACCCAGCAGTGGAGAAGATACCCAATAACAAGGGTTCAACAGAGTTTGTTTaGCTTTCCAGATTATTGACC +
Preference number: 4 (lower is better)
Translates to: QTMCRPYPAVEKIPNNKGSTEFV*LSRLLT
Trigger: GGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGA...ACCCTTGTTATTGGGTATCTTCTCCACTGCTGGGTAAGGCCTGCACATGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCCTCTTTATCCCTCCATaGGGCCTTACTGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCLFIPP*GLTDLG
Trigger: TCCCAGGTCAGTAAGGCCGCATGGAGGGATAAAGAG...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATGCCACCATAGAGGGTTaGATGAATGAACATCGTAAG +
Preference number: 4 (lower is better)
Translates to: SWREFLPFAPICFGHRMDATIEG*MNEHRK
Trigger: CTTACGATGTTCATTCATCCAACCCTCTATGGTGGC...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGCGTCCCTGTGAAATATaGACGGCGCCATTTACATGG +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQRPCEI*TAPFTW
Trigger: CCATGTAAATGGCGCCGTTCATATTTCACAGGGACG...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCCGGGGGACACACAAGTaGCTATTGGGTGAAATAGAC +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCRGTHK*LLGEID
Trigger: GTCTATTTCACCCAATAGTCACTTGTGTGTCCCCCG...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGAGAGTGTGTGTTTGGTaGGGGCCACATGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLRVCVW*GPHELP
Trigger: AGGCAATTCATGTGGCCCTCACCAAACACACACTCT...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKESLST*CSFTFQ
Trigger: CTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTC...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGCATCACAGCGGACCATaGGCCACAGAAAGACACATT +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQHHSGP*ATERHI
Trigger: AATGTGTCTTTCTGTGGCCCATGGTCCGCTGTGATG...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAACACGTTTTCACCAAGTaGGCAGTTGTGGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLEHVFTK*AVVVLN
Trigger: ATTTAAAACCACAACTGCCCACTTGGTGAAAACGTG...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAACTTGGCTGCACCCCTTaGTGCAGTTCTCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKLGCTP*CSSQRA
Trigger: TGCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAG...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TGGCACTTGCCTTGCTTGGTGCTGGTGCCTGTGCGCTATTCCTATCTTTTGAGTAATTTCGCATGCTATTaGATGGGTACACTGAAATAT +
Preference number: 4 (lower is better)
Translates to: WHLPCLVLVPVRYSYLLSNFACY*MGTLKY
Trigger: ATATTTCAGTGTACCCATCCAATAGCATGCGAAATT...ACTCAAAAGATAGGAATAGCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGGCTCCTGTCCTACTGTaGACAAGCCCCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: VEPSRKLRTELYMISLSLAPVLL*TSPSKS
Trigger: AGACTTTGAGGGGCTTGTCCACAGTAGGACAGGAGC...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTACTTGCCACTTGGAATaGACATTTTTACTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLTCHLE*TFLLLS
Trigger: GGAAAGAAGTAAAAATGTTCATTCCAAGTGGCAAGT...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGAGATACATGGGTGTGTaGAGCTATCGGGACATGAAC +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLRYMGV*SYRDMN
Trigger: GTTCATGTCCCGATAGCTCCACACACCCATGTATCT...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCGTTTGTTTGGCTCTGTaGGCTCTGGCTTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIVCLAL*ALAWFE
Trigger: CTCAAACCAAGCCAGAGCCCACAGAGCCAAACAAAC...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGCTGGCCAGGGTTACATaGACACATGGCTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLLARVT*THGFLS
Trigger: AGACAAAAAGCCATGTGTCCATGTAACCCTGGCCAG...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGTTGATTGTTGCTGTTTaGCCAGCACACTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQLIVAV*PAHFAP
Trigger: GGGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAA...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp TACCCAATAACAAGGGTGATTGGTTCAGGAAAATTATaGGACGGGAAGGAGTTCTGCATTGAGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: YPITRVIGSGKL*DGKEFCIEKRT
Trigger: TGTCCTCTTCTCAATGCAGAACTCCTTCCCGTCCAATAATTTTCCTGAACCAATCACCCTTGTTATTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCAATCCGAACGGCATTTaGTCCCTCTTCCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: NVNRVCLPFQIIDHILWINPNGI*SLFLSV
Trigger: TACAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATT...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR GCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGCCCTTTGCTCCAATTTaGTTTGGGCACAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQPFAPI*FGHRMD
Trigger: ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGG...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCTGGGTGTTTCTCAGCTaGCTTGGAAGACTTGCAACT +
Preference number: 4 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIWVFLS*LGRLAT
Trigger: AGTTGCAAGTCTTCCAAGCCAGCTGAGAAACACCCA...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCTGCTCCAATTTGCTTTaGGCACAGAATGGATCCTGT +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCCSNLL*AQNGSC
Trigger: ACAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCA...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp ACCAGTGACTGCCCAAGGTCTAGAGGTACAAAACGATaGCATGTCTACAAAGTAGGACAGTCACTTAATTTA +
Preference number: 4 (lower is better)
Translates to: TSDCPRSRGTKR*HVYKVGQSLNL
Trigger: TAAATTAAGTGACTGTCCTACTTTGTAGACATGCAATCGTTTTGTACCTCTAGACCTTGGGCAGTCACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAGTTTCACGACTATTATaGCTCACAGGGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKVSRLL*LTGKLS
Trigger: GCTCAGCTTCCCTGTGAGTCATAATAGTCGTGAAAC...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGAGAAGAGGACAACTCTaGAAACAGGATACACCAAAG +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQRRGQL*KQDTPK
Trigger: CTTTGGTGTATCCTGTTTCCAGAGTTGTCCTCTTCT...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCATGCAAATCATCGTATaGTCACTTGGTATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCMQIIV*SLGILW
Trigger: CCAAAGGATACCAAGTGATCATACGATGATTTGCAT...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGAACTGCCTGAAGAATTaGATACATTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQNCLKN*IHYPGR
Trigger: TCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTT...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCTGCCTAATAGTCTCATaGAGCAACATAAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: STVNLFFNQLINTTEMTCCLIVS*SNIKDQ
Trigger: CTGATCCTTTATGTTGCTTCATGAGACTATTAGGCA...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp CTCATTGCACTCTATTTGTCTAGCCTTATCATGACCTaGAAAGAAAATCTTGCTCCCCTCTGCTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: LIALYLSSLIMT*KENLAPLCFDC
Trigger: ACAATCAAAGCAGAGGGGAGCAAGATTTTCTTTCAAGGTCATGATAAGGCTAGACAAATAGAGTGCAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp TTCATTTATAATCGAAACATAATCCGAACGGCATTTGCTCCCTCTTCCTCTCTGTGGCCAGTTAGTTATTaGTTGATTTTTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FIYNRNIIRTAFAPSSSLWPVSY*LIFGSV
Trigger: AACTGACCCAAAAATCAACCAATAACTAACTGGCCA...CAGAGAGGAAGAGGGAGCAAATGCCGTTCGGATTATGTTTCGATTATAAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CCA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGGATGACTGCAGTGAATaGGAAATCATCTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VEPSRKLRTELYMISLSLDDCSE*EIIFCF
Trigger: AAAGCAAAAGATGATTTCCCATTCACTGCAGTCATC...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
3UTR CAA 72 bp AAATCTTTCTGGTTTTCAGTCAGAAAATCTCTGGACTaGCACATGTCTTTAATTTCTGCAGTGCAATTTGGC +
Preference number: 4 (lower is better)
Translates to: KSFWFSVRKSLD*HMSLISAVQFG
Trigger: GCCAAATTGCACTGCAGAAATTAAAGACATGTGCAAGTCCAGAGATTTTCTGACTGAAAACCAGAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR TCA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAAAATTTGTGTTTTCATaGGCCAAAGGTCATAGCACA +
Preference number: 4 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKKFVFS*AKGHST
Trigger: TGTGCTATGACCTTTGGCTCATGAAAACACAAATTT...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 90 bp ACCAGCTCCACGGAGATGAAGCGGTCGCTAAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGCCGGCTGCGCACCTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: TSSTEMKRSLRRAMS*SSFMSRRLRTCVQC
Trigger: ACACTGCACGCAGGTGCGCAGCCGGCGGCTCATGAAGGAGCTGCAGGACATCGCGCGCCTTAGCGACCGCTTCATCTCCGTGGAGCTGGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCGAGCCAGCAGGGGCATaGAGTTTCCTGCCGGCTCGT +
Preference number: 5 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGEPAGA*SFLPAR
Trigger: ACGAGCCGGCAGGAAACTCAATGCCCCTGCTGGCTC...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGTGGGCACCACCGTGCTaGCCTACGAAGGGAGTCTAC +
Preference number: 5 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQWAPPC*PTKGVY
Trigger: GTAGACTCCCTTCGTAGGCAAGCACGGTGGTGCCCA...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGCTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCGGGCTCTGGCTTGGTTaGAGTTCCCACAGATACATG +
Preference number: 5 (lower is better)
Translates to: GLCGNVAPGFRPLLLTLGGLWLG*SSHRYM
Trigger: CATGTATCTGTGGGAACTCAAACCAAGCCAGAGCCC...GCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 90 bp GTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCGAACAGGCTCTCGTCCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSFMSCHSTESLSTW*SFTFQSNRLSSTSS
Trigger: GGAGCTGGTGGACGAGAGCCTGTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTTGTGTGGGAACGTGGCCCCAGGCTTCAGGCCTCTCCTTCTCACCCTGGGCTCCACCTGACCCCCTCATaGCACTCTATTTGTCTAGCC +
Preference number: 5 (lower is better)
Translates to: LVWERGPRLQASPSHPGLHLTPS*HSICLA
Trigger: GGCTAGACAAATAGAGTGCAATGAGGGGGTCAGGTG...GAGCCCAGGGTGAGAAGGAGAGGCCTGAAGCCTGGGGCCACGTTCCCACACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CCA 90 bp TTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAGTCGAACAGGCTCTCGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LVSFMSCHSTESLST*CSFTFQSNRLSSTS
Trigger: GCTGGTGGACGAGAGCCTGTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGGCTGCCTGTGTGCACTaGGGGGCAAATAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQAACVH*GANKKV
Trigger: CACTTTCTTATTTGCCCCCAAGTGCACACAGGCAGC...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGGGAAGGAGTTCTGCATaGAGAAGAGGACAGATGGGT +
Preference number: 5 (lower is better)
Translates to: ATHRASSTRQARLSGGTVGRSSA*RRGQMG
Trigger: ACCCATCTGTCCTCTTCTCAATGCAGAACTCCTTCC...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAAATAGGTTCCTTGGCTaGTGTGGGAACGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLNRFLG*CGNVAP
Trigger: TGGGGCCACGTTCCCACACAAGCCAAGGAACCTATT...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAAGTAAGGCAGTGGCCTaGTGGCTCCTGTCCTACTGT +
Preference number: 5 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLSKAVA*WLLSYC
Trigger: ACAGTAGGACAGGAGCCACAAGGCCACTGCCTTACT...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 90 bp GTGAGGTTGAGCAGGATGAACTCGGTGTTGGTCTCCTTCATGTCCTaGCACAGCACCGAGTCCTTGTCCACCTGGTGCAGCTTCACGTTC +
Preference number: 5 (lower is better)
Translates to: VRLSRMNSVLVSFMS*HSTESLSTWCSFTF
Trigger: GAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACCGAGTTCATCCTGCTCAACCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGGTGGAGGATGCACAGCATTGAGGAGATGTCAGGGTACTGGTGTGTGTGTGGATCTTGGCTGCACCCCTaGGTGCAGTTCTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GWRMHSIEEMSGYWCVCGSWLHP*VQFSES
Trigger: GCTCTCTGAGAACTGCACCAAGGGGTGCAGCCAAGA...TCCACACACACACCAGTACCCTGACATCTCCTCAATGCTGTGCATCCTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAATTGCTCCCCTCTGCTTaGATTGTTGCTGTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYELLPSA*IVAVWP
Trigger: TGGCCAAACAGCAACAATCAAAGCAGAGGGGAGCAA...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAGTCTTTGCAGGAGTATaGGCACATGTGCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLVFAGV*AHVRVC
Trigger: ACACACACGCACATGTGCCAATACTCCTGCAAAGAC...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GACTCTGCAGGTGAGAGGTGGCAAGGGGACTCCAGTTCTCCCGTTCAGGGCCAGCGCTATTCCTATCTTTaGAGTTCCTATCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: DSAGERWQGDSSSPVQGQRYSYL*SSYPGK
Trigger: CTTCCCTGGATAGGAACTCAAAAGATAGGAATAGCG...CTGGCCCTGAACGGGAGAACTGGAGTCCCCTTGCCACCTCTCACCTGCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATATCCGTCCCTGGCCCTaGACCAGGCTGGCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: SWREFLPFAPICFGHRMDIRPWP*TRLAAN
Trigger: GTTCGCAGCCAGCCTGGTCAAGGGCCAGGGACGGAT...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCACAATGACTGGATCCTaGAGGCAGTGTATCAGGTAT +
Preference number: 5 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFTMTGS*RQCIRY
Trigger: ATACCTGATACACTGCCTCAAGGATCCAGTCATTGT...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCACATCCCTTCAGCTCCTaGGCTGCTTCTGGGGACTAT +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAHPFSS*AASGDY
Trigger: ATAGTCCCCAGAAGCAGCCAAGGAGCTGAAGGGATG...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTTGGCACTTGCCTTGCTaGGTGCTGGTGCCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLWHLPC*VLVPVR
Trigger: GCGCACAGGCACCAGCACCAAGCAAGGCAAGTGCCA...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGACCGTGAGAGGTACAAAACGATaGCATGTCTACAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: ATHRASSTRQARLSGGTVRGTKR*HVYKVG
Trigger: TCCTACTTTGTAGACATGCAATCGTTTTGTACCTCT...CACGGTCCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAAGGATGAACTCGGTGTaGGTCTCCTTCATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSARMNSV*VSFMSC
Trigger: GCAGGACATGAAGGAGACCAACACCGAGTTCATCCT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAGGATCTCTGAAAACCTaGAACCAATGGGCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAGSLKT*NQWAGP
Trigger: GGGACCTGCCCATTGGTTCAAGGTTTTCAGAGATCC...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTTGCTCTGAAAGGCGCCAATCCTaGTTCTTTGAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GPFPNIGRDCSQLTIRCSERRQS*FFEARP
Trigger: AGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC...AGAGCAACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp ATAATTGCTACACACAGGGCAAGCTCCACACGCCAGGCTAGGCTGTCAGGTGGGGGTTCAGGAAAATTATaGGACGGGAAGGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IIATHRASSTRQARLSGGGSGKL*DGKEFC
Trigger: GCAGAACTCCTTCCCGTCCAATAATTTTCCTGAACC...CCCACCTGACAGCCTAGCCTGGCGTGTGGAGCTTGCCCTGTGTGTAGCAATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTAAGAAACAGCAAGTCTTaGCAGGAGTATTGGCACATG +
Preference number: 5 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLRNSKS*QEYWHM
Trigger: CATGTGCCAATACTCCTGCAAAGACTTGCTGTTTCT...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCATTTGGCCAGCACACTTaGCTCCCGTGTTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAFGQHT*LPCFFW
Trigger: CCAGAAGAAACACGGGAGCAAAGTGTGCTGGCCAAA...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGGGAGGATGCACAGCATaGAGGAGATGTCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEGGCTA*RRCQGT
Trigger: AGTACCCTGACATCTCCTCAATGCTGTGCATCCTCC...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAAATCACTTGGTATCCTTaGGCAGTTCTGACATTCATT +
Preference number: 5 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYEITWYP*AVLTFI
Trigger: AATGAATGTCAGAACTGCCAAAGGATACCAAGTGAT...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAACGGCGCCATTTACTCATTGCACTCTATTaGTCTAGCCTTATCATGACC +
Preference number: 5 (lower is better)
Translates to: GRTAEMHGVPVKYERRHLLIALY*SSLIMT
Trigger: GGTCATGATAAGGCTAGACAAATAGAGTGCAATGAG...TAAATGGCGCCGTTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGTCGGGGAAGGTGAGGTaGAGCAGGATGAACTCGGTG +
Preference number: 5 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQSGKVR*SRMNSV
Trigger: CACCGAGTTCATCCTGCTCAACCTCACCTTCCCCGA...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GGACTCCAGTTCTCCCGTTCAGGGCCAGTGAGGACAGAGTCCACGCTCCCTTTCCTGGCAATGTTAAATTaGTGTTTTCATGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GLQFSRSGPVRTESTLPFLAMLN*CFHEPK
Trigger: CTTTGGCTCATGAAAACACAAATTTAACATTGCCAG...GAAAGGGAGCGTGGACTCTGTCCTCACTGGCCCTGAACGGGAGAACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AACACGTGCCGGGGACGCACGGCGGAGATGCACGGCGTCCCTGTGAAATATGAAAAATTTCGCATGCTATaGGATGGGTACACTGAAATA +
Preference number: 5 (lower is better)
Translates to: NTCRGRTAEMHGVPVKYEKFRML*DGYTEI
Trigger: TATTTCAGTGTACCCATCCAATAGCATGCGAAATTT...TTCATATTTCACAGGGACGCCGTGCATCTCCGCCGTGCGTCCCCGGCACGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTTGCCTACGAAGGGAGTCTACCAGAAAGGGAGTCCGCACTCCTAACAGTCCAATTGCTCCAATTTGCTTaGGGCACAGAATGGATCCTG +
Preference number: 5 (lower is better)
Translates to: LAYEGSLPERESALLTVQLLQFA*GTEWIL
Trigger: CAGGATCCATTCTGTGCCCAAAGCAAATTGGAGCAA...TTGGACTGTTAGGAGTGCGGACTCCCTTTCTGGTAGACTCCCTTCGTAGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGGCCCTTTGCTCCAATTaGCTTTGGGCACAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEALCSN*LWAQNG
Trigger: TCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGC...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp ATTCAGTGGCTCTACCCTCACTACAGTCAGGAAGTAAGCTCTGCCCCTTTAGAAAGTGCAATTTGGCACTaGCCTTGCTTGGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IQWLYPHYSQEVSSAPLESAIWH*PCLVLV
Trigger: CACCAGCACCAAGCAAGGCAAGTGCCAAATTGCACT...TTCTAAAGGGGCAGAGCTTACTTCCTGACTGTAGTGAGGGTAGAGCCACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp TCAGGATGCAGTTCTGGCTGGAGTAAAAACGGGTGGAGGATGCACAGCATTGAGTTTCTGCAGTGCAATTaGGCACTTGCCTTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: SGCSSGWSKNGWRMHSIEFLQCN*ALALLG
Trigger: ACCAAGCAAGGCAAGTGCCAAATTGCACTGCAGAAA...CTCAATGCTGTGCATCCTCCACCCGTTTTTACTCCAGCCAGAACTGCATCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAATGGGAAATCATCTTTaGCTTTTGGTGGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSAMGNHL*LLVVER
Trigger: TCTCTCCACCACCAAAAGCAAAAGATGATTTCCCAT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CCAAAGCACTTCTGCTGCGTCATTTTGGCCAATTCCCACACTGACCTGGTAGGAAAAGTAACAATAAGTTaGGTGAATGGGCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PKHFCCVILANSHTDLVGKVTIS*VNGQPC
Trigger: GCAGGGCTGCCCATTCACCAAACTTATTGTTACTTT...TCCTACCAGGTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAAGTGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGAATTTGGCACTTGCCTaGCTTGGTGCTGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQNLALA*LGAGAC
Trigger: ACAGGCACCAGCACCAAGCAAGGCAAGTGCCAAATT...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GCCGTAGGACCATTTCCTAACATCGGACGAGACTGTTCGCAGCTGACCATCCGTCAATCTACTGAATTTTaGCAAAGACTATGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AVGPFPNIGRDCSQLTIRQSTEF*QRLWVP
Trigger: AGGAACCCATAGTCTTTGCAAAAATTCAGTAGATTG...ACGGATGGTCAGCTGCGAACAGTCTCGTCCGATGTTAGGAAATGGTCCTACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGGGGAATTTCTGCCCTTaGCTCCAATTTGCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQGNFCP*LQFALG
Trigger: GCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCC...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CACCCACTGTCTGATTATTCCCTCGCTGTCTGTCCAAAGAGGAATAGGTTCCTTTTTGATTGTTGCTGTTaGGCCAGCACACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: HPLSDYSLAVCPKRNRFLFDCCC*ASTLCS
Trigger: GGAGCAAAGTGTGCTGGCCAAACAGCAACAATCAAA...AAGGAACCTATTCCTCTTTGGACAGACAGCGAGGGAATAATCAGACAGTGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AATGTCAACAGAGTTTGTTTGCCTTTCCAGATTATTGACCACATTCTGTGGATCAGGGTGAATTGGCGGTaGGGGGCAGTGCAGGGATCT +
Preference number: 5 (lower is better)
Translates to: NVNRVCLPFQIIDHILWIRVNWR*GAVQGS
Trigger: AGATCCCTGCACTGCCCCCAACCGCCAATTCACCCT...GATCCACAGAATGTGGTCAATAATCTGGAAAGGCAAACAAACTCTGTTGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGGAGACACAGGGTGAATaGGCGGTTGGGGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: VEPSRKLRTELYMISLSLETQGE*AVGGSA
Trigger: TGCACTGCCCCCAACCGCCAATTCACCCTGTGTCTC...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAACACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKHSTES*STWCSF
Trigger: GAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTG...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGGTGGGACCGTGTCCTGCTTCCTGAAATCAGCTCCATGAATAGGGACTCTGCAAGCAGTAAGATACAATaGGCAACATCTGAACTTGAT +
Preference number: 5 (lower is better)
Translates to: RWDRVLLPEISSMNRDSASSKIQ*ATSELD
Trigger: ATCAAGTTCAGATGTTGCCAATTGTATCTTACTGCT...TGCAGAGTCCCTATTCATGGAGCTGATTTCAGGAAGCAGGACACGGTCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGTGGCAACATCTGAACTaGATCGAATCATCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQWQHLN*IESSLQ
Trigger: CTGAAGGGATGATTCGATCAAGTTCAGATGTTGCCA...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GAAAGGCGCCAATCCTTGTTCTTTGAGGCAAGGCCTCTTGGATCTCTGAAAACCAAACTGCCTGAAGAATaGAATACATTATCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: ERRQSLFFEARPLGSLKTKLPEE*NTLSRK
Trigger: CTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT...GGTTTTCAGAGATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGCGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGTTGGAGGGAATTTCTGCCCTTTGCTCCAATTTGCTTTGGGCACAGAATGGATTCGGGACATGAACATTaGCACCCACTGTCTGATTAT +
Preference number: 5 (lower is better)
Translates to: SWREFLPFAPICFGHRMDSGHEH*HPLSDY
Trigger: ATAATCAGACAGTGGGTGCAAATGTTCATGTCCCGA...ATCCATTCTGTGCCCAAAGCAAATTGGAGCAAAGGGCAGAAATTCCCTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGAGAGGAATAGGTTCCTaGGCTTGTGTGGGAACGTGG +
Preference number: 5 (lower is better)
Translates to: VEPSRKLRTELYMISLSLRGIGS*ACVGTW
Trigger: CCACGTTCCCACACAAGCCAAGGAACCTATTCCTCT...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AAACTGCCTGAAGAATTGAATACATTATCCCGGAAGACTTTTCCTCCTTCACAGTTCTGCTGCGTCATTTaGGCCAATTCCCACACTGAC +
Preference number: 5 (lower is better)
Translates to: KLPEELNTLSRKTFPPSQFCCVI*ANSHTD
Trigger: GTCAGTGTGGGAATTGGCCAAAATGACGCAGCAGAA...CTGTGAAGGAGGAAAAGTCTTCCGGGATAATGTATTCAATTCTTCAGGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp CTCATTAGGGCAGTGCCTCTAGATTATTTGACTCATGCACTCACCATCTTCCAGAGCCTTATCATGACCTaGAAAGAAAATCTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LIRAVPLDYLTHALTIFQSLIMT*KENLAP
Trigger: GGGAGCAAGATTTTCTTTCAAGGTCATGATAAGGCT...CTGGAAGATGGTGAGTGCATGAGTCAAATAATCTAGAGGCACTGCCCTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp GTAGAACCTAGCAGAAAACTAAGAACAGAGCTGTACATGATTTCACTGTCTTTGGCCAATCCTTGTTCTTaGAGGCAAGGCCTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: VEPSRKLRTELYMISLSLANPCS*RQGLLD
Trigger: ATCCAAGAGGCCTTGCCTCAAAGAACAAGGATTGGC...CAAAGACAGTGAAATCATGTACAGCTCTGTTCTTAGTTTTCTGCTAGGTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp AGCACCGTGAACCTGTTTTTCAATCAGCTAATAAACACTACTGAAATGACCTGCTCATCGTATGATCACTaGGTATCCTTTGGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: STVNLFFNQLINTTEMTCSSYDH*VSFGSS
Trigger: AGAACTGCCAAAGGATACCAAGTGATCATACGATGA...GCAGGTCATTTCAGTAGTGTTTATTAGCTGATTGAAAAACAGGTTCACGGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS-3UTR CAA 90 bp ATTGTCACTAGCACAGATATTAAAATGAGTCAGATGACTGCAGTGAATGGGAAAGTGCCTCTAGATTATTaGACTCATGCACTCACCATC +
Preference number: 5 (lower is better)
Translates to: IVTSTDIKMSQMTAVNGKVPLDY*THALTI
Trigger: GATGGTGAGTGCATGAGTCAAATAATCTAGAGGCAC...TTTCCCATTCACTGCAGTCATCTGACTCATTTTAATATCTGTGCTAGTGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS TCA 72 bp CCTCCACGGTGTAGGCGCTGGACCAGCCGCGCGGCGTaGGCAGCTCCATGCAGATGGCGCCGCCGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPRCRRWTSRAA*AAPCRWRRRPA
Trigger: TGCTGGACGGCGGCGCCATCTGCATGGAGCTGCTCACGCCGCGCGGCTGGTCCAGCGCCTACACCGTGGAGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 72 bp ACGGAGATGAAGCGGTCGCTAAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGCCGGCTGCGCACCTGC +
Preference number: 6 (lower is better)
Translates to: TEMKRSLRRAMS*SSFMSRRLRTC
Trigger: GCAGGTGCGCAGCCGGCGGCTCATGAAGGAGCTGCAGGACATCGCGCGCCTTAGCGACCGCTTCATCTCCGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 72 bp TCTACAGATCCGTCCCTGGCCCTTGACCAGGCTGGCTaGGAACTGGCGCATGACGGCCTCCACGGTGTAGGC +
Preference number: 6 (lower is better)
Translates to: STDPSLALDQAG*ELAHDGLHGVG
Trigger: GCCTACACCGTGGAGGCCGTCATGCGCCAGTTCGCAGCCAGCCTGGTCAAGGGCCAGGGACGGATCTGTAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS GCA 72 bp ATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCGAACAGGCTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: MSCHSTESLSTW*SFTFQSNRLSS
Trigger: GGACGAGAGCCTGTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CAA 90 bp AACTCGGTGTTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTCACGTTCCAGTCGAACAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: NSVLVSFMSCHSTES*STWCSFTFQSNRLS
Trigger: CGAGAGCCTGTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACCGAGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CAA 90 bp GGGAAGTTGTCGGGGAAGGTGAGGTTGAGCAGGATGAACTCGGTGTaGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACC +
Preference number: 6 (lower is better)
Translates to: GKLSGKVRLSRMNSV*VSFMSCHSTESLST
Trigger: GGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACCGAGTTCATCCTGCTCAACCTCACCTTCCCCGACAACTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CCA 72 bp TTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAGTCGAACAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: FMSCHSTESLST*CSFTFQSNRLS
Trigger: CGAGAGCCTGTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CAA 72 bp TCGGGGAAGGTGAGGTTGAGCAGGATGAACTCGGTGTaGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCC +
Preference number: 6 (lower is better)
Translates to: SGKVRLSRMNSV*VSFMSCHSTES
Trigger: GGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACCGAGTTCATCCTGCTCAACCTCACCTTCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS TCA 72 bp CACGTGGCAGACATCAGCCGTCGGACACGGGCGGGGTaGCCCAACCATATTTTTCATGCGTCTTCACCAAAC +
Preference number: 6 (lower is better)
Translates to: HVADISRRTRAG*PNHIFHASSPN
Trigger: GTTTGGTGAAGACGCATGAAAAATATGGTTGGGTCACCCCGCCCGTGTCCGACGGCTGATGTCTGCCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399816.4
CDS CAA 72 bp TTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTCACGTTCCAGTCGAAC +
Preference number: 6 (lower is better)
Translates to: LVSFMSCHSTES*STWCSFTFQSN
Trigger: GTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399816.4