Pregenerated sensors for TVP23B (Homo sapiens)

Ensembl gene IDs: ENSG00000171928

Ensembl transcript IDs: ENST00000476139.5, ENST00000482741.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	GCCAGGCTGGATGGAGTGCAGTGGCCCGCGGCTCACTaGAACCTCAGCCTCCCCAGTTCAAGCGATTCTCCT	+
Preference number: 6 (lower is better) Translates to: ARLDGVQWPAAH*NLSLPSSSDSP Trigger: AGGAGAATCGCTTGAACTGGGGAGGCTGAGGTTGCAGTGAGCCGCGGGCCACTGCACTCCATCCAGCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476139.5
CDS TCA 72 bp	TTACTGAGCATCTACTATGTGCTGGTAATACAACAGTaGCTAACAGATACCAACTCCTTCCTCAGGGAAAGA	+
Preference number: 6 (lower is better) Translates to: LLSIYYVLVIQQ*LTDTNSFLRER Trigger: TCTTTCCCTGAGGAAGGAGTTGGTATCTGTTAGTCACTGTTGTATTACCAGCACATAGTAGATGCTCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482741.1
CDS CAA 72 bp	GGGATACATTCCAAGACCCCCAGCAGATGCCTCAAATaGTGGTTAATACCAAACCTTATATATGCTATATTT	+
Preference number: 6 (lower is better) Translates to: GIHSKTPSRCLK*WLIPNLIYAIF Trigger: AAATATAGCATATATAAGGTTTGGTATTAACCACAATTTGAGGCATCTGCTGGGGGTCTTGGAATGTATCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482741.1
CDS TCA 72 bp	AACAGGGAAATTGGATCTAGTCTGGGTATCAGAAAATaGCTCTCTGAGGAGTCAACATTTGGAATGAAATAT	+
Preference number: 6 (lower is better) Translates to: NREIGSSLGIRK*LSEESTFGMKY Trigger: ATATTTCATTCCAAATGTTGACTCCTCAGAGAGTCATTTTCTGATACCCAGACTAGATCCAATTTCCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482741.1

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