Pregenerated sensors for TUT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000149016Ensembl transcript IDs: ENST00000278279.7, ENST00000308436.11, ENST00000463241.2, ENST00000469480.1, ENST00000476907.6, ENST00000478537.1, ENST00000494385.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTaGTCCCGTGGGCGGACACGCAGGCGATGTCCTCCCAGGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: AAPLGDLEAGLWNSF*SRGRTRRRCPPRLC Trigger: GCACAGCCTGGGAGGACATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 90 bp | CTTTGGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTaGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCGGACAC | + |
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Preference number: 1 (lower is better) Translates to: LWPAGDCRGPLLWGI*RPGSGTPSAPVGGH Trigger: GTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 90 bp | TTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTaGGCGGACACGCAGGCGATGTCCTCCCAGGCTGTGCTGGGACTG | + |
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Preference number: 1 (lower is better) Translates to: FGGFGGRALELLLLP*ADTQAMSSQAVLGL Trigger: CAGTCCCAGCACAGCCTGGGAGGACATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 90 bp | CAGCTAGCGCTTTGGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTaGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: QLALWPAGDCRGPLL*GIWRPGSGTPSAPV Trigger: CACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAGCGCTAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 90 bp | GTGACAAGACAGCCTCTCGAGCACCCACGTCCCCCATCTCCACAATaGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATA | + |
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Preference number: 1 (lower is better) Translates to: VTRQPLEHPRPPSPQ*QTLPVVPITWEAMI Trigger: TATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTGTCTTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 90 bp | CCCCCATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTaGGAGGCTATGATAAGAGCATCACTTGGGCCCAGGATGTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PPSPQWQTLPVVPIT*EAMIRASLGPRMLR Trigger: CCTCAACATCCTGGGCCCAAGTGATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCATGTTGAGGCTGCAGTaGGCTGTGATTGTGATTGCA | + |
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Preference number: 2 (lower is better) Translates to: LLWGIWRPGSGTPSAPVGMLRLQ*AVIVIA Trigger: TGCAATCACAATCACAGCTCACTGCAGCCTCAACAT...GCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CAA 90 bp | TCCCCCATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTaGGGAGGCTATGATAAGAGCATCACTTGGGCCCAGGATGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SPISTMANTPCSSNY*GGYDKSITWAQDVE Trigger: CTCAACATCCTGGGCCCAAGTGATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | GGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTaGAACTCCTTCTGCTCCCGTGGGCGGACACGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GAAPLGDLEAGL*NSFCSRGRTRR Trigger: CCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR GCA 72 bp | TTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTaGTCCCGTGGGCGGACACGCAGGCGATGTCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LGDLEAGLWNSF*SRGRTRRRCPP Trigger: GGGAGGACATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | TTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTaGGCGGACACGCAGGCGATGTCCTCCCAGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FGGRALELLLLP*ADTQAMSSQAV Trigger: CACAGCCTGGGAGGACATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | GCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTaGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: AGDCRGPLLWGI*RPGSGTPSAPV Trigger: CACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR TCA 72 bp | ACGTCTGCAGCCTCAGCTAGCGCTTTGGCCAGCTGGTaGCTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSAASASALASW*LSGAAPLGDLE Trigger: CTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAGCGCTAGCTGAGGCTGCAGACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | CTTTGGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTaGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LWPAGDCRGPLL*GIWRPGSGTPS Trigger: AGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | CAGCCTCTCGAGCACCCACGTCCCCCATCTCCACAATaGCAAACACTCCCTGTAGTTCCAATTACTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QPLEHPRPPSPQ*QTLPVVPITWE Trigger: CTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CCA 72 bp | CCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTaGGAGGCTATGATAAGAGCATCACTTGGGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PQWQTLPVVPIT*EAMIRASLGPR Trigger: CCTGGGCCCAAGTGATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | TGGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTTTCTGCCTCCCAAGTaGGCATCAAGGCTGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: WPAGDCRGPLLWGIWRPGFLPPK*ASRLGR Trigger: CCGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAA...GCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | TGGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCACACTTCGAAGTCCCTaGGCCTTTCTCGCAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: WPAGDCRGPLLWGIWRPGTLRSP*AFLAAR Trigger: ACGAGCTGCGAGAAAGGCCCAGGGACTTCGAAGTGT...GCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | GGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTTTGGAGGCCGGGCTCTaGAACTCCTTCTGCTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GDCRGPLLWGIWRPGSGTLEAGL*NSFCSR Trigger: ACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAA...AGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGCTCCTTTGGGGGATTTaGAGGCCGGGCTCTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QLVTVGGRSFGGFGGRALLLWGI*RPGSGT Trigger: AGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAG...CAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | CGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGCCTCAGCTAGCGCTTTaGCCAGCTGGTGACTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RSFGGFGGRALELLLLPWPQLAL*PAGDCR Trigger: CCGACAGTCACCAGCTGGCCAAAGCGCTAGCTGAGG...CCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | CCAGCTGGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTCCCTGGGAAAGCCACTaGCAAACACACTTCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PAGDCRGPLLWGIWRPGSPWESH*QTHFEV Trigger: GACTTCGAAGTGTGTTTGTCAGTGGCTTTCCCAGGG...AGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCTCTACCAGGTGCCGGTaGTTTCTGCCTCCCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLWGIWRPGSGTPSAPVGSTRCR*FLPPKW Trigger: CCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGA...GCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGTGTCCTCCCAGGCTGTaGTGGGACTGTGACAAGACA | + |
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Preference number: 4 (lower is better) Translates to: RSFGGFGGRALELLLLPWCPPRL*WDCDKT Trigger: TGTCTTGTCACAGTCCCAGCACAGCCTGGGAGGACA...CCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | CCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCGGCCCCCATCTCCACAATaGCAAACACTCCCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PLGDLEAGLWNSFCSRGRPPSPQ*QTLPVV Trigger: AACTACAGGGAGTGTTTGCCATTGTGGAGATGGGGG...CCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | GGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTATGTTGAGGCTGCAGTaGGCTGTGATTGTGATTGCA | + |
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Preference number: 4 (lower is better) Translates to: GDCRGPLLWGIWRPGSGTMLRLQ*AVIVIA Trigger: TGCAATCACAATCACAGCTCACTGCAGCCTCAACAT...AGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | TGCTGGGACTGTGACAAGACAGCCTCTCGAGCACCCACGTCCCCCATCTCCACATTGGCTGTAGTAACGTaGCAGAGGCAGCAGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CWDCDKTASRAPTSPISTLAVVT*QRQQRN Trigger: GTTCCGCTGCTGCCTCTGCCACGTTACTACAGCCAA...TGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTGTCTTGTCACAGTCCCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | CAGCCTCTCGAGCACCCACGTCCCCCATCTCCACAATGGCAAACACTCCCTGTACCTTGTCCTTGTCCATaGCAACACTGGCCACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QPLEHPRPPSPQWQTLPVPCPCP*QHWPQV Trigger: GACCTGTGGCCAGTGTTGTCATGGACAAGGACAAGG...TACAGGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | TCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATAAGCGGGGGCCGCTCCTTTaGGGGATTTGGAGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: STMANTPCSSNYLGGYDKRGPLL*GIWRPG Trigger: GCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCG...CTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | GGTGACTGTCGGGGGCCGCTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTGTAGTTCCAATTACTTaGGAGGCTATGATAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GDCRGPLLWGIWRPGSGTVVPIT*EAMIRA Trigger: TGCTCTTATCATAGCCTCCCAAGTAATTGGAACTAC...AGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | TCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATAAGGCTTTGGCCAGCTGGTaGCTGTCGGGGGCCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: STMANTPCSSNYLGGYDKALASW*LSGAAP Trigger: AGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAGC...CTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CCCATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATCTCTGGAACTCCTTCTaGTCCCGTGGGCGGACACGC | + |
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Preference number: 4 (lower is better) Translates to: PISTMANTPCSSNYLGGYLWNSF*SRGRTR Trigger: GCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAG...ATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTCGAGCACCCACGTCCCCCATCTCCACAATGGCAAACACTCCCTGTAAGCTGTGATTGTGATTaGACCACTACACACCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QPLEHPRPPSPQWQTLPVSCDCD*TTTHQP Trigger: AGGCTGGTGTGTAGTGGTGCAATCACAATCACAGCT...TACAGGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CCA 90 bp | TCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATAAGCTCCTTCTGCTCCCGTaGGCGGACACGCAGGCGATG | + |
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Preference number: 4 (lower is better) Translates to: STMANTPCSSNYLGGYDKLLLLP*ADTQAM Trigger: CATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAG...CTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | ACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATAAGAGCATCACTTGGGCCCACTACACACCAGCCTaGGAGACAGCGAGACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TPCSSNYLGGYDKSITWAHYTPA*ETARPL Trigger: CAAGGGTCTCGCTGTCTCTCAGGCTGGTGTGTAGTG...GGCCCAAGTGATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CCCATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGGTGCCGGTGCTTTCTaGCTCCCAAGTGGGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: PISTMANTPCSSNYLGGYGAGAF*LPSGHQ Trigger: TTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACC...ATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR GCA 90 bp | CCCATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATCGTAGTTCTACCAGGTaGCGGTGCTTTCTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PISTMANTPCSSNYLGGYRSSTR*RCFLPP Trigger: GGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACG...ATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR TCA 90 bp | ATCTCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATGCTGTGCTGGGACTGTaGCAAGACAGCCTCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: ISTMANTPCSSNYLGGYDAVLGL*QDSLSS Trigger: GCTCGAGAGGCTGTCTTGTCACAGTCCCAGCACAGC...ATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| 3UTR CAA 72 bp | TCCACAATGGCAAACACTCCCTGTAGTTCCAATTACTaGGGAGGCTATGATAAGAGCATCACTTGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STMANTPCSSNY*GGYDKSITWAQ Trigger: CTGGGCCCAAGTGATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCATTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS CCA 90 bp | GACCCCGGGAGGAACGGCGCTGGTACTGGAGGCTTCGGCAGTAATTaGCTGCTGCTCGGCAGCAGTTCTGTAGGCGCCCAGCCACCCGGC | + |
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Preference number: 5 (lower is better) Translates to: DPGRNGAGTGGFGSN*LLLGSSSVGAQPPG Trigger: GCCGGGTGGCTGGGCGCCTACAGAACTGCTGCCGAGCAGCAGCCAATTACTGCCGAAGCCTCCAGTACCAGCGCCGTTCCTCCCGGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS-3UTR CAA 90 bp | CTCCTTTGGGGGATTTGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCTCGGGGGCCGCTCCTTaGGGGGATTTGGAGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LLWGIWRPGSGTPSAPVGSGAAP*GDLEAG Trigger: CCCGGCCTCCAAATCCCCCAAAGGAGCGGCCCCCGA...GCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS GCA 90 bp | TCCTTGGTTTGCTGCTGCAAGCGTCTACGGGCTCGCCGCCGCCCTTaGCACACTCGGTGCCACAAGGCACAGCGCCAGCTCGCTGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLVCCCKRLRARRRP*HTRCHKAQRQLAEE Trigger: CTCCTCAGCGAGCTGGCGCTGTGCCTTGTGGCACCGAGTGTGGCAAGGGCGGCGGCGAGCCCGTAGACGCTTGCAGCAGCAAACCAAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS-3UTR CAA 90 bp | TGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCGGACACGCAGGCGATTCAAGGCTGGGTCGGTaGGCTGTAGTAACGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: WRPGSGTPSAPVGGHAGDSRLGR*AVVTWQ Trigger: CTGCCACGTTACTACAGCCAACCGACCCAGCCTTGA...ATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS TCA 90 bp | ATGCAGGGCCAGCCGGTTACTGAGGGAGACATCACCGTGGAGACCTaGAGGCCGATGACAGAACTTGACCACAGGGCGCCGGGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: MQGQPVTEGDITVET*RPMTELDHRAPGRG Trigger: CCCTCTGCCCGGCGCCCTGTGGTCAAGTTCTGTCATCGGCCTTCAGGTCTCCACGGTGATGTCTCCCTCAGTAACCGGCTGGCCCTGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS GCA 90 bp | GGGCCTTTCTCGCAGCTCGTAGTTCTACCAGGTGCCGGTGCTTTCTaGCTCCCAAGTGGGCATCAAGGCTGGGTCCTCTGCCACCACCGG | + |
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Preference number: 5 (lower is better) Translates to: GPFSQLVVLPGAGAF*LPSGHQGWVLCHHR Trigger: CCGGTGGTGGCAGAGGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGAGAAAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494385.1 |
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| CDS CCA 90 bp | CAGGGCTTGAGGGTCCAGTGGGGAAGCCAGGGCCGAGTCCAGCGATaGAGATTCTGGAGCCTTTGGGACTGGCTGGGGCTCTTCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QGLRVQWGSQGRVQR*RFWSLWDWLGLFQV Trigger: GACTTGGAAGAGCCCCAGCCAGTCCCAAAGGCTCCAGAATCTCCATCGCTGGACTCGGCCCTGGCTTCCCCACTGGACCCTCAAGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS TCA 90 bp | TGTAGGCGCCCAGCCACCCGGCTGGTCACATTGGCTGCGACATTGTaGCTCAGGTCAAAAGGGTCCTGGAGATTCAGGGGGCCAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: CRRPATRLVTLAATL*LRSKGSWRFRGPRR Trigger: GCGCCTTGGCCCCCTGAATCTCCAGGACCCTTTTGACCTGAGTCACAATGTCGCAGCCAATGTGACCAGCCGGGTGGCTGGGCGCCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 90 bp | AAAGGGTGGACCACACAGCCAGGGAAGAACTCTGTGAAGACCTCCTaGATCAGGGCCACCACTAGGCTGCGAAGCTGCCGCTCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KGWTTQPGKNSVKTS*IRATTRLRSCRSAS Trigger: CGAGGCCGAGCGGCAGCTTCGCAGCCTAGTGGTGGCCCTGATGCAGGAGGTCTTCACAGAGTTCTTCCCTGGCTGTGTGGTCCACCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
||
| CDS CCA 90 bp | TGGGGAGAAGCAAGGGTCTCGGAGGCCAAGGCAGAGTCCGGAGTTTaGGGCGCCAGGGAGGAGGAAGGGGTTTCAAAGTCCAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGEARVSEAKAESGV*GAREEEGVSKSRAS Trigger: TGAAGCCCTGGACTTTGAAACCCCTTCCTCCTCCCTGGCGCCCCAAACTCCGGACTCTGCCTTGGCCTCCGAGACCCTTGCTTCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCCGGGCTCTGGAACTCCTTCTGCTCCCGTGGGCGGACACGCAGGCGATGAGACAGCGAGACCCTaGTCCTTGTCCATGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: WRPGSGTPSAPVGGHAGDETARP*SLSMTT Trigger: TGTTGTCATGGACAAGGACAAGGGTCTCGCTGTCTC...ATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
||
| CDS TCA 90 bp | AGCCGGTTACTGAGGGAGACATCACCGTGGAGACCTGAAGGCCGATaGCAGAACTTGACCACAGGGCGCCGGGCAGAGGGCACAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLRETSPWRPEGR*QNLTTGRRAEGTVW Trigger: CCAAACTGTGCCCTCTGCCCGGCGCCCTGTGGTCAAGTTCTGTCATCGGCCTTCAGGTCTCCACGGTGATGTCTCCCTCAGTAACCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS GCA 90 bp | CTTCGAAGTCCCTGGGCCTTTCTCGCAGCTCGTAGTTCTACCAGGTaGCGGTGCTTTCTGCCTCCCAAGTGGGCATCAAGGCTGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSPWAFLAARSSTR*RCFLPPKWASRLGR Trigger: CCGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGAGAAAGGCCCAGGGACTTCGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 |
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| CDS GCA 90 bp | TCTGTGAAGACCTCCTGCATCAGGGCCACCACTAGGCTGCGAAGCTaGCGCTCGGCCTCGGACAACTCCCTCAGCCCCACAAGCTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: SVKTSCIRATTRLRS*RSASDNSLSPTSFI Trigger: GATAAAGCTTGTGGGGCTGAGGGAGTTGTCCGAGGCCGAGCGGCAGCTTCGCAGCCTAGTGGTGGCCCTGATGCAGGAGGTCTTCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
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| CDS CCA 90 bp | TGGCTGCTGCTCGGCAGCAGTTCTGTAGGCGCCCAGCCACCCGGCTaGTCACATTGGCTGCGACATTGTGACTCAGGTCAAAAGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WLLLGSSSVGAQPPG*SHWLRHCDSGQKGP Trigger: AGGACCCTTTTGACCTGAGTCACAATGTCGCAGCCAATGTGACCAGCCGGGTGGCTGGGCGCCTACAGAACTGCTGCCGAGCAGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
||
| CDS CCA 90 bp | CAGGGCTTGAGGGTCCAGTGGGGAAGCCAGGGCCGAGTCCAGCGATaGAGATTCTGGAGCCTTTGGGACTGGCTTGTCCTTGTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGLRVQWGSQGRVQR*RFWSLWDWLVLVHD Trigger: GTCATGGACAAGGACAAGCCAGTCCCAAAGGCTCCAGAATCTCCATCGCTGGACTCGGCCCTGGCTTCCCCACTGGACCCTCAAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278279.7 |
||
| CDS GCA 90 bp | AGGGGCAGGTCCCCTGGCTGCCCAGGGCTCTGCATGGCCCAGTCCTaGACCATCTCTCCAACCTCTATAACCATCTCTTCTACCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRSPGCPGLCMAQS*TISPTSITISSTLS Trigger: AGACAGGGTAGAAGAGATGGTTATAGAGGTTGGAGAGATGGTGCAGGACTGGGCCATGCAGAGCCCTGGGCAGCCAGGGGACCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
||
| CDS GCA 90 bp | CTTCGAAGTCCCTGGGCCTTTCTCGCAGCTCGTAGTTCTACCAGGTaGCGGTGCTTTCTGCCTCCCAAGTGGGCATCAAGGCTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSPWAFLAARSSTR*RCFLPPKWASRLGP Trigger: AGGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGAGAAAGGCCCAGGGACTTCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494385.1 |
||
| CDS GCA 90 bp | GCCGCCATAGCGACTCTCCTGTACCGACAAAAACACAAGCACCTCTaGCACCACCGGAACCCACTTCGCCAAAGCTCAACGCGCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AAIATLLYRQKHKHL*HHRNPLRQSSTRSE Trigger: TTCCGAGCGCGTTGAGCTTTGGCGAAGTGGGTTCCGGTGGTGGCAGAGGTGCTTGTGTTTTTGTCGGTACAGGAGAGTCGCTATGGCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308436.11 |
||
| CDS CCA 90 bp | CTCGGCAGCAGTTCTGTAGGCGCCCAGCCACCCGGCTGGTCACATTaGCTGCGACATTGTGACTCAGGTCAAAAGGGTCCTGGAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGSSSVGAQPPGWSH*LRHCDSGQKGPGDS Trigger: TGAATCTCCAGGACCCTTTTGACCTGAGTCACAATGTCGCAGCCAATGTGACCAGCCGGGTGGCTGGGCGCCTACAGAACTGCTGCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTCTCGAGCACCCACGTCCCCCATCTCCACAATGGCAAACACTCCCTGTGCGAGACCCTTGTCCTaGTCCATGACAACACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TASRAPTSPISTMANTPCARPLS*SMTTLA Trigger: GGCCAGTGTTGTCATGGACAAGGACAAGGGTCTCGC...ACAGGGAGTGTTTGCCATTGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
||
| CDS GCA 90 bp | GAGGAAACTAACAAGATGGAGAGGGTGGAGGCTAGGCCGAGTACCTaGTTTCTGGGTGAGCTGGGACACAGTGGGCAACACAGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EETNKMERVEARPST*FLGELGHSGQHRRV Trigger: GACCCTCCTGTGTTGCCCACTGTGTCCCAGCTCACCCAGAAAGCAGGTACTCGGCCTAGCCTCCACCCTCTCCATCTTGTTAGTTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469480.1 |
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| CDS TCA 90 bp | TTTGCTTGTCCCTCCCTGAGAGGACTCCCCAGTTCCACCTCCTTCTaGCCGCGTTCTCTTGGTTGCCTGTTCTATATGGCACCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FACPSLRGLPSSTSF*PRSLGCLFYMAPQC Trigger: GCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGGAGGTGGAACTGGGGAGTCCTCTCAGGGAGGGACAAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
||
| CDS CCA 90 bp | GTTCCACCTCCTTCTGACCGCGTTCTCTTGGTTGCCTGTTCTATATaGCACCCCAGTGCTTCCCTGAATACCTGCACCAGGGCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPPPSDRVLLVACSI*HPSASLNTCTRAAV Trigger: CACTGCTGCCCTGGTGCAGGTATTCAGGGAAGCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGGAGGTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 90 bp | AGGTCAAACCTCTCTCCCTGCCCCCACATGATGTCCTTGCCCAGATaGTGCTGCTCCTTGCTAGCCAGTGTAACCTTGGGCAAGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RSNLSPCPHMMSLPR*CCSLLASVTLGKSL Trigger: AAGTGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGGAGAGAGGTTTGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
||
| CDS CCA 90 bp | TCCACATCCCTGGGAAAGCCACTGACAAACACACTTCGAAGTCCCTaGGCCTTTCTCGCAGCTCGTAGTTCTACCAGGTGCCGGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STSLGKPLTNTLRSP*AFLAARSSTRCRCF Trigger: AAAGCACCGGCACCTGGTAGAACTACGAGCTGCGAGAAAGGCCCAGGGACTTCGAAGTGTGTTTGTCAGTGGCTTTCCCAGGGATGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 ENST00000494385.1 |
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| CDS GCA 90 bp | AACCTCTCTCCCTGCCCCCACATGATGTCCTTGCCCAGATGCTGCTaGTCCTTGCTAGCCAGTGTAACCTTGGGCAAGTCACTTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLSPCPHMMSLPRCC*SLLASVTLGKSLNC Trigger: GCAATTAAGTGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGGAGAGAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS GCA 90 bp | TCAAACCTCTCTCCCTGCCCCCACATGATGTCCTTGCCCAGATGCTaGTGCTCCTTGCTAGCCAGTGTAACCTTGGGCAAGTCACTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SNLSPCPHMMSLPRC*CSLLASVTLGKSLN Trigger: ATTAAGTGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGGAGAGAGGTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGACTGTGACAAGACAGCCTCTCGAGCACCCACGTCCCCCATCTCCACATGTAGTTCCAATTACTaGGGAGGCTATGATAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CWDCDKTASRAPTSPISTCSSNY*GGYDKS Trigger: GCTCTTATCATAGCCTCCCAAGTAATTGGAACTACA...TGTGGAGATGGGGGACGTGGGTGCTCGAGAGGCTGTCTTGTCACAGTCCCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS TCA 90 bp | ACTACACACCAGCCTGAGAGACAGCGAGACCCTTGTCCTTGTCCATaGCAACACTGGCCACAGGTCCAAATGCTAGGAAGTACTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTHQPERQRDPCPCP*QHWPQVQMLGSTQR Trigger: TCTCTGAGTACTTCCTAGCATTTGGACCTGTGGCCAGTGTTGTCATGGACAAGGACAAGGGTCTCGCTGTCTCTCAGGCTGGTGTGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS-3UTR CAA 90 bp | ATGGCAAACACTCCCTGTAGTTCCAATTACTTGGGAGGCTATGATAAGAGCATCGCTCCTTTGGGGGATTaGGAGGCCGGGCTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MANTPCSSNYLGGYDKSIAPLGD*EAGLWN Trigger: GTTCCAGAGCCCGGCCTCCAAATCCCCCAAAGGAGC...GATGCTCTTATCATAGCCTCCCAAGTAATTGGAACTACAGGGAGTGTTTGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS TCA 90 bp | ACAACACTGGCCACAGGTCCAAATGCTAGGAAGTACTCAGAGAGCTaGGCAGAATCCACATCCCTGGGAAAGCCACTGACAAACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: TTLATGPNARKYSES*AESTSLGKPLTNTL Trigger: AAGTGTGTTTGTCAGTGGCTTTCCCAGGGATGTGGATTCTGCTCAGCTCTCTGAGTACTTCCTAGCATTTGGACCTGTGGCCAGTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 ENST00000494385.1 |
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| CDS CCA 90 bp | CCAAGAAGAGGTCAAGATCACAGCCATGGACATCGAAGCTATTTATaGAAGAGCCAAAAGGGTGGACCACACAGCCAGGGAAGAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRRGQDHSHGHRSYL*KSQKGGPHSQGRTL Trigger: CAGAGTTCTTCCCTGGCTGTGTGGTCCACCCTTTTGGCTCTTCCATAAATAGCTTCGATGTCCATGGCTGTGATCTTGACCTCTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
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| CDS GCA 90 bp | GCAAGGAGATTGAGGGTGGGGGTAGAGAGATCTCATTCACAGAGCTaGTTGGTGTATCTAAGTGTGATGAAGAAGAGAGAGGAAACTAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRLRVGVERSHSQS*LVYLSVMKKREETN Trigger: GTTAGTTTCCTCTCTCTTCTTCATCACACTTAGATACACCAAGCAGCTCTGTGAATGAGATCTCTCTACCCCCACCCTCAATCTCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469480.1 |
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| CDS TCA 90 bp | AATAAACTAGCAGCTTTATTGCCCTTCAGGGGCCATGTCTTCACTTaGGATGTCGAATTGCTTGAGGGAGGAAAACCTGTAAGAAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKLAALLPFRGHVFT*DVELLEGGKPVRND Trigger: ATCATTTCTTACAGGTTTTCCTCCCTCAAGCAATTCGACATCTCAAGTGAAGACATGGCCCCTGAAGGGCAATAAAGCTGCTAGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS CAA 90 bp | GCCAGCCACCCTGCTCTTGTGCCAGCGCCACCTCCAGCTCCCTCCTaGGTTTGCTGCTGCAAGCGTCTACGGGCTCGCCGCCGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASHPALVPAPPPAPS*VCCCKRLRARRRPC Trigger: GCAAGGGCGGCGGCGAGCCCGTAGACGCTTGCAGCAGCAAACCAAGGAGGGAGCTGGAGGTGGCGCTGGCACAAGAGCAGGGTGGCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | TTGGGCCCCCGCTCTGCCAGGGCTGCGTGGCTGGGCTaGCCCTCTTCTCCAGGGGCTCCATGCTTTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGPRSARAAWLG*PSSPGAPCFPV Trigger: CACTGGAAAGCATGGAGCCCCTGGAGAAGAGGGGCAGCCCAGCCACGCAGCCCTGGCAGAGCGGGGGCCCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | TGCTGCTGCAAGCGTCTACGGGCTCGCCGCCGCCCTTaGCACACTCGGTGCCACAAGGCACAGCGCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCCKRLRARRRP*HTRCHKAQRQL Trigger: GAGCTGGCGCTGTGCCTTGTGGCACCGAGTGTGGCAAGGGCGGCGGCGAGCCCGTAGACGCTTGCAGCAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | CCAGCGCCACCTCCAGCTCCCTCCTTGGTTTGCTGCTaGAAGCGTCTACGGGCTCGCCGCCGCCCTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAPPPAPSLVCC*KRLRARRRPCH Trigger: GTGGCAAGGGCGGCGGCGAGCCCGTAGACGCTTGCAGCAGCAAACCAAGGAGGGAGCTGGAGGTGGCGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | CCAGAGATTAGAAGGCAGGCCCCCTGCCACAGGCAGTaGCTGACCCTCCCGCAGGGACAGCAGGGAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PEIRRQAPCHRQ*LTLPQGQQGAT Trigger: CGTGGCTCCCTGCTGTCCCTGCGGGAGGGTCAGGCACTGCCTGTGGCAGGGGGCCTGCCTTCTAATCTCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS CAA 72 bp | TTGCTGCTGCAAGCGTCTACGGGCTCGCCGCCGCCCTaGCCACACTCGGTGCCACAAGGCACAGCGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLQASTGSPPP*PHSVPQGTAPA Trigger: AGCTGGCGCTGTGCCTTGTGGCACCGAGTGTGGCAAGGGCGGCGGCGAGCCCGTAGACGCTTGCAGCAGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | ACCTCCTGCATCAGGGCCACCACTAGGCTGCGAAGCTaGCGCTCGGCCTCGGACAACTCCCTCAGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TSCIRATTRLRS*RSASDNSLSPT Trigger: TGTGGGGCTGAGGGAGTTGTCCGAGGCCGAGCGGCAGCTTCGCAGCCTAGTGGTGGCCCTGATGCAGGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
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| CDS CCA 72 bp | TTTGTGCCCCCACGTCTGCAGCCTCAGCTAGCGCTTTaGCCAGCTGGTGACTGTCGGGGGCCGCTCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FVPPRLQPQLAL*PAGDCRGPLLW Trigger: CCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAGCGCTAGCTGAGGCTGCAGACGTGGGGGCACAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
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| CDS CCA 72 bp | AGGGTCCAGTGGGGAAGCCAGGGCCGAGTCCAGCGATaGAGATTCTGGAGCCTTTGGGACTGGCTGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVQWGSQGRVQR*RFWSLWDWLGL Trigger: GAGCCCCAGCCAGTCCCAAAGGCTCCAGAATCTCCATCGCTGGACTCGGCCCTGGCTTCCCCACTGGACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS CAA 72 bp | GAACTTGACCACAGGGCGCCGGGCAGAGGGCACAGTTaGGACTCGATACACCCCAGGGACACAGCCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ELDHRAPGRGHS*DSIHPRDTAPE Trigger: CTCCGGGGCTGTGTCCCTGGGGTGTATCGAGTCCAAACTGTGCCCTCTGCCCGGCGCCCTGTGGTCAAGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
||
| CDS TCA 72 bp | CTGAGGGAGACATCACCGTGGAGACCTGAAGGCCGATaGCAGAACTTGACCACAGGGCGCCGGGCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRETSPWRPEGR*QNLTTGRRAEG Trigger: GCCCTCTGCCCGGCGCCCTGTGGTCAAGTTCTGTCATCGGCCTTCAGGTCTCCACGGTGATGTCTCCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
||
| CDS CCA 72 bp | AACTTGACCACAGGGCGCCGGGCAGAGGGCACAGTTTaGACTCGATACACCCCAGGGACACAGCCCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLTTGRRAEGTV*TRYTPGTQPRR Trigger: TCTCCGGGGCTGTGTCCCTGGGGTGTATCGAGTCCAAACTGTGCCCTCTGCCCGGCGCCCTGTGGTCAAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
||
| CDS CAA 90 bp | CCGATGACAGAACTTGACCACAGGGCGCCGGGCAGAGGGCACAGTTaGGACTCGATACACCCCAGGGACACAGCCCCGGAGAATGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PMTELDHRAPGRGHS*DSIHPRDTAPENGS Trigger: GGATCCATTCTCCGGGGCTGTGTCCCTGGGGTGTATCGAGTCCAAACTGTGCCCTCTGCCCGGCGCCCTGTGGTCAAGTTCTGTCATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
||
| CDS CCA 72 bp | TGGAGAGGGTGGAGGCTAGGCCGAGTACCTGCTTTCTaGGTGAGCTGGGACACAGTGGGCAACACAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRGWRLGRVPAF*VSWDTVGNTGG Trigger: CCCTCCTGTGTTGCCCACTGTGTCCCAGCTCACCCAGAAAGCAGGTACTCGGCCTAGCCTCCACCCTCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469480.1 |
||
| CDS GCA 72 bp | TCGCAGCTCGTAGTTCTACCAGGTGCCGGTGCTTTCTaGCTCCCAAGTGGGCATCAAGGCTGGGTCGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLVVLPGAGAF*LPSGHQGWVGW Trigger: CCAACCGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 |
||
| CDS GCA 72 bp | ACCACACAGCCAGGGAAGAACTCTGTGAAGACCTCCTaGATCAGGGCCACCACTAGGCTGCGAAGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TTQPGKNSVKTS*IRATTRLRSCR Trigger: GCGGCAGCTTCGCAGCCTAGTGGTGGCCCTGATGCAGGAGGTCTTCACAGAGTTCTTCCCTGGCTGTGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
||
| CDS GCA 72 bp | TCGCAGCTCGTAGTTCTACCAGGTGCCGGTGCTTTCTaGCTCCCAAGTGGGCATCAAGGCTGGGTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLVVLPGAGAF*LPSGHQGWVLC Trigger: GCAGAGGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494385.1 |
||
| CDS CCA 72 bp | CTCGGCAGCAGTTCTGTAGGCGCCCAGCCACCCGGCTaGTCACATTGGCTGCGACATTGTGACTCAGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGSSSVGAQPPG*SHWLRHCDSGQ Trigger: TTGACCTGAGTCACAATGTCGCAGCCAATGTGACCAGCCGGGTGGCTGGGCGCCTACAGAACTGCTGCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
||
| CDS CCA 72 bp | AGGGTCCAGTGGGGAAGCCAGGGCCGAGTCCAGCGATaGAGATTCTGGAGCCTTTGGGACTGGCTTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RVQWGSQGRVQR*RFWSLWDWLVL Trigger: AAGGACAAGCCAGTCCCAAAGGCTCCAGAATCTCCATCGCTGGACTCGGCCCTGGCTTCCCCACTGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278279.7 |
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| CDS CCA 72 bp | GCTTCCCTGAATACCTGCACCAGGGCAGCAGTGAGCTaGGTGAAGGGTGCAAGGGGTAAAGGGATCGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: ASLNTCTRAAVS*VKGARGKGIGV Trigger: TACGCCGATCCCTTTACCCCTTGCACCCTTCACCCAGCTCACTGCTGCCCTGGTGCAGGTATTCAGGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | CCCTGCCCCCACATGATGTCCTTGCCCAGATGCTGCTaGTCCTTGCTAGCCAGTGTAACCTTGGGCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PCPHMMSLPRCC*SLLASVTLGKS Trigger: TGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS GCA 72 bp | AACAAGATGGAGAGGGTGGAGGCTAGGCCGAGTACCTaGTTTCTGGGTGAGCTGGGACACAGTGGGCAACAC | + |
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Preference number: 6 (lower is better) Translates to: NKMERVEARPST*FLGELGHSGQH Trigger: GTGTTGCCCACTGTGTCCCAGCTCACCCAGAAAGCAGGTACTCGGCCTAGCCTCCACCCTCTCCATCTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469480.1 |
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| CDS CCA 72 bp | AGTTCTACCAGGTGCCGGTGCTTTCTGCCTCCCAAGTaGGCATCAAGGCTGGGTCGGTTGGCTGTAGTAACG | + |
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Preference number: 6 (lower is better) Translates to: SSTRCRCFLPPK*ASRLGRLAVVT Trigger: CGTTACTACAGCCAACCGACCCAGCCTTGATGCCCACTTGGGAGGCAGAAAGCACCGGCACCTGGTAGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 |
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| CDS CCA 72 bp | AGTTCTGTAGGCGCCCAGCCACCCGGCTGGTCACATTaGCTGCGACATTGTGACTCAGGTCAAAAGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSVGAQPPGWSH*LRHCDSGQKGP Trigger: AGGACCCTTTTGACCTGAGTCACAATGTCGCAGCCAATGTGACCAGCCGGGTGGCTGGGCGCCTACAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS TCA 72 bp | CCCTCCCTGAGAGGACTCCCCAGTTCCACCTCCTTCTaGCCGCGTTCTCTTGGTTGCCTGTTCTATATGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSLRGLPSSTSF*PRSLGCLFYMA Trigger: TGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGGAGGTGGAACTGGGGAGTCCTCTCAGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | GCGACTCTCCTGTACCGACAAAAACACAAGCACCTCTaGCACCACCGGAACCCACTTCGCCAAAGCTCAACG | + |
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Preference number: 6 (lower is better) Translates to: ATLLYRQKHKHL*HHRNPLRQSST Trigger: CGTTGAGCTTTGGCGAAGTGGGTTCCGGTGGTGGCAGAGGTGCTTGTGTTTTTGTCGGTACAGGAGAGTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308436.11 |
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| CDS CCA 72 bp | ACTCCCCAGTTCCACCTCCTTCTGACCGCGTTCTCTTaGTTGCCTGTTCTATATGGCACCCCAGTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TPQFHLLLTAFS*LPVLYGTPVLP Trigger: GGGAAGCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGGAGGTGGAACTGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS CAA 72 bp | GACTCCCCAGTTCCACCTCCTTCTGACCGCGTTCTCTaGGTTGCCTGTTCTATATGGCACCCCAGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DSPVPPPSDRVL*VACSIWHPSAS Trigger: GGAAGCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGGAGGTGGAACTGGGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS GCA 72 bp | CGTTCTCTTGGTTGCCTGTTCTATATGGCACCCCAGTaGTTCCCTGAATACCTGCACCAGGGCAGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSLGCLFYMAPQ*FPEYLHQGSSE Trigger: CTCACTGCTGCCCTGGTGCAGGTATTCAGGGAAGCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS CCA 72 bp | CTGGGAAAGCCACTGACAAACACACTTCGAAGTCCCTaGGCCTTTCTCGCAGCTCGTAGTTCTACCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LGKPLTNTLRSP*AFLAARSSTRC Trigger: GCACCTGGTAGAACTACGAGCTGCGAGAAAGGCCCAGGGACTTCGAAGTGTGTTTGTCAGTGGCTTTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 ENST00000494385.1 |
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| CDS CCA 72 bp | CCTTCTGACCGCGTTCTCTTGGTTGCCTGTTCTATATaGCACCCCAGTGCTTCCCTGAATACCTGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSDRVLLVACSI*HPSASLNTCTR Trigger: CCTGGTGCAGGTATTCAGGGAAGCACTGGGGTGCCATATAGAACAGGCAACCAAGAGAACGCGGTCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000469480.1 ENST00000476907.6 |
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| CDS CAA 90 bp | TCTCCCTGCCCCCACATGATGTCCTTGCCCAGATGCTGCTGCTCCTaGCTAGCCAGTGTAACCTTGGGCAAGTCACTTAATTGCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SPCPHMMSLPRCCCS*LASVTLGKSLNCSQ Trigger: TTGGGAGCAATTAAGTGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS TCA 72 bp | GCGCTCGGAAGCAACTTCCGCCGATCCGATAGGAAGTaGCATAAAGTCGTTCAATTGCGCGGACACACTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALGSNFRRSDRK*HKVVQLRGHTP Trigger: AGGAGTGTGTCCGCGCAATTGAACGACTTTATGTCACTTCCTATCGGATCGGCGGAAGTTGCTTCCGAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308436.11 |
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| CDS TCA 72 bp | AGAGCTGAGCAGAATCCACATCCCTGGGAAAGCCACTaGCAAACACACTTCGAAGTCCCTGGGCCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RAEQNPHPWESH*QTHFEVPGPFS Trigger: CGAGAAAGGCCCAGGGACTTCGAAGTGTGTTTGTCAGTGGCTTTCCCAGGGATGTGGATTCTGCTCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 ENST00000494385.1 |
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| CDS TCA 72 bp | CAGCCTGAGAGACAGCGAGACCCTTGTCCTTGTCCATaGCAACACTGGCCACAGGTCCAAATGCTAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QPERQRDPCPCP*QHWPQVQMLGS Trigger: ACTTCCTAGCATTTGGACCTGTGGCCAGTGTTGTCATGGACAAGGACAAGGGTCTCGCTGTCTCTCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478537.1 |
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| CDS GCA 72 bp | CTGATCCCTATAAACAAGAGGTCAAACCTCTCTCCCTaGCCCCACATGATGTCCTTGCCCAGATGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LIPINKRSNLSP*PHMMSLPRCCC Trigger: GCAGCAGCATCTGGGCAAGGACATCATGTGGGGGCAGGGAGAGAGGTTTGACCTCTTGTTTATAGGGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS TCA 72 bp | GCCACAGGTCCAAATGCTAGGAAGTACTCAGAGAGCTaGGCAGAATCCACATCCCTGGGAAAGCCACTGACA | + |
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Preference number: 6 (lower is better) Translates to: ATGPNARKYSES*AESTSLGKPLT Trigger: TGTCAGTGGCTTTCCCAGGGATGTGGATTCTGCTCAGCTCTCTGAGTACTTCCTAGCATTTGGACCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000278279.7 ENST00000308436.11 ENST00000476907.6 ENST00000478537.1 ENST00000494385.1 |
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| CDS TCA 72 bp | TCATTACTAGTCCTCTACCAGGCTCCCCAAACTCACTaGGGGGCTCCACATTTATGCTGGGCTCCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLLVLYQAPQTH*GAPHLCWAPVL Trigger: CAAGACTGGAGCCCAGCATAAATGTGGAGCCCCTCAGTGAGTTTGGGGAGCCTGGTAGAGGACTAGTAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS TCA 72 bp | ATTCTGGAGCCTTTGGGACTGGCTTGTCCTTGTCCATaGCAACACTGGCCACAGGTCCAAATGCTAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ILEPLGLACPCP*QHWPQVQMLGS Trigger: ACTTCCTAGCATTTGGACCTGTGGCCAGTGTTGTCATGGACAAGGACAAGCCAGTCCCAAAGGCTCCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278279.7 |
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| CDS CCA 72 bp | GGTCAAGATCACAGCCATGGACATCGAAGCTATTTATaGAAGAGCCAAAAGGGTGGACCACACAGCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GQDHSHGHRSYL*KSQKGGPHSQG Trigger: TCCCTGGCTGTGTGGTCCACCCTTTTGGCTCTTCCATAAATAGCTTCGATGTCCATGGCTGTGATCTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308436.11 ENST00000476907.6 ENST00000494385.1 |
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| CDS CCA 72 bp | CCACGAAGATCCCAACAAGATACACAGGAGAAGAACTaGGCTAGCAGGGAACTGAGGGGCTCCACATTTATG | + |
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Preference number: 6 (lower is better) Translates to: PRRSQQDTQEKN*ASRELRGSTFM Trigger: CATAAATGTGGAGCCCCTCAGTTCCCTGCTAGCCCAGTTCTTCTCCTGTGTATCTTGTTGGGATCTTCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308436.11 ENST00000476907.6 |
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| CDS CAA 72 bp | CCCAGATGCTGCTGCTCCTTGCTAGCCAGTGTAACCTaGGGCAAGTCACTTAATTGCTCCCAAACATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PRCCCSLLASVT*GKSLNCSQTWF Trigger: AAACCATGTTTGGGAGCAATTAAGTGACTTGCCCAAGGTTACACTGGCTAGCAAGGAGCAGCAGCATCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000463241.2 ENST00000469480.1 |
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| CDS CAA 90 bp | AGGAGATTGAGGGTGGGGGTAGAGAGATCTCATTCACAGAGCTGCTaGGTGTATCTAAGTGTGATGAAGAAGAGAGAGGAAACTAACAAG | + |
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Preference number: 6 (lower is better) Translates to: RRLRVGVERSHSQSC*VYLSVMKKREETNK Trigger: CTTGTTAGTTTCCTCTCTCTTCTTCATCACACTTAGATACACCAAGCAGCTCTGTGAATGAGATCTCTCTACCCCCACCCTCAATCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469480.1 |
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