RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000253352

Ensembl transcript IDs: ENST00000519077.4, ENST00000521091.6, ENST00000563812.2, ENST00000569149.2, ENST00000569384.2, ENST00000602393.1, ENST00000602971.2, ENST00000643071.1, ENST00000643077.1, ENST00000643280.1, ENST00000643553.1, ENST00000643877.1, ENST00000643920.1, ENST00000644027.1, ENST00000644773.2, ENST00000646021.1, ENST00000646496.1, ENST00000647354.1

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACAAGACAGGAGTGGAGGTAAAGGCCACATCATGATGGCTGAATaGCTCCTGGGTCACAGTGGTCCACTGGAATGGGTGTCTTCGTCA +
Preference number: 1 (lower is better)
Translates to: EQDRSGGKGHIMMAE*LLGHSGPLEWVSSS
Trigger: TGACGAAGACACCCATTCCAGTGGACCACTGTGACCCAGGAGGCATTCAGCCATCATGATGTGGCCTTTACCTCCACTCCTGTCTTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp AAAGCGATTTCAACCCCACACACATTGATAGGCAGAGGAGGAAACTaGGGCGCAGACAAATTACAGAGTGACTCGCCTAAGGTCACTCCG +
Preference number: 1 (lower is better)
Translates to: KAISTPHTLIGRGGN*GADKLQSDSPKVTP
Trigger: CGGAGTGACCTTAGGCGAGTCACTCTGTAATTTGTCTGCGCCTCAGTTTCCTCCTCTGCCTATCAATGTGTGTGGGGTTGAAATCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp TTGTTGAGGGCGAGCAGTCTACAGCAACCAGACCTAGGCCTTGTTTaGCGAGATGTAGAGTCGAGTCATGTAATCACAATTGGCCTAGAG +
Preference number: 1 (lower is better)
Translates to: LLRASSLQQPDLGLV*RDVESSHVITIGLE
Trigger: CTCTAGGCCAATTGTGATTACATGACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTCTGGTTGCTGTAGACTGCTCGCCCTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp CACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTaGTTTCCCCTGCACTGGCTTCATTCTCTACATGGTAGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: HKRCHQDSSLSIFWL*FPLHWLHSLHGRPC
Trigger: ACAGGGCCTACCATGTAGAGAATGAAGCCAGTGCAGGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp GTACTGGTGAATCGGACTCATTTCTGCACTACTGAAGGAGAGAAATaGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGA +
Preference number: 1 (lower is better)
Translates to: VLVNRTHFCTTEGEK*TRLSNCCIPSRPDR
Trigger: TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCCTTCAGTAGTGCAGAAATGAGTCCGATTCACCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp AACTCAGGTCTTCTAATTCCCAGTAACAGTGCTGGTGGTAGTGCTTaGTCAGTCGTTGTCTCTTTTCTCACAGCAAGGTCAACAGTCCCA +
Preference number: 1 (lower is better)
Translates to: NSGLLIPSNSAGGSA*SVVVSFLTARSTVP
Trigger: TGGGACTGTTGACCTTGCTGTGAGAAAAGAGACAACGACTGAGCAAGCACTACCACCAGCACTGTTACTGGGAATTAGAAGACCTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp CTTCACTACTTCATCCAGAGCAGCTTCACTTTTACTCTGGGCTTCTaGACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTGG +
Preference number: 1 (lower is better)
Translates to: LHYFIQSSFTFTLGF*TVFTQRASWPQSLW
Trigger: CCAAAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGTAAAAGTGAAGCTGCTCTGGATGAAGTAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp GTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTaGACTGGCTTCATTCTCTACATGGTAGGCCCTGTTAGTTTGAGG +
Preference number: 1 (lower is better)
Translates to: VIRIQVSPYFGSAFP*TGFILYMVGPVSLR
Trigger: CCTCAAACTAACAGGGCCTACCATGTAGAGAATGAAGCCAGTGCAGGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp ATCAGACTTGAGGTTCTGTTTAGGAGTCTATGCTACATCTGGGAGTaGCAGGGTCAGCAGAGCCAGATTTGTCAAAGTTGGCCCTACTTT +
Preference number: 1 (lower is better)
Translates to: IRLEVLFRSLCYIWE*QGQQSQICQSWPYF
Trigger: AAAGTAGGGCCAACTTTGACAAATCTGGCTCTGCTGACCCTGTCACTCCCAGATGTAGCATAGACTCCTAAACAGAACCTCAAGTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp TACAGTTCTGTGTGTACTGGTGAATCGGACTCATTTCTGCACTACTaGAGGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTC +
Preference number: 1 (lower is better)
Translates to: YSSVCTGESDSFLHY*RREMDAAFELLYSF
Trigger: GAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCCTTCAGTAGTGCAGAAATGAGTCCGATTCACCAGTACACACAGAACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp ATAGAAGCCAAGCAGGGGACTGTTGTTAACCCCGAATATCCATTATaGATAGAAACAGCTCACATATCCCAGGGACTCAAACAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: IEAKQGTVVNPEYPL*IETAHISQGLKQGF
Trigger: GAAGCCCTGTTTGAGTCCCTGGGATATGTGAGCTGTTTCTATGCATAATGGATATTCGGGGTTAACAACAGTCCCCTGCTTGGCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp GCTGGTCAAGGAGTATGCAGCAATGGTCCTTCCTGTTGTGAACATTaGGTCCTAGTGGGTGAGGTGTGGGTTGTTACTATTAAAAATCCT +
Preference number: 1 (lower is better)
Translates to: AGQGVCSNGPSCCEH*VLVGEVWVVTIKNP
Trigger: AGGATTTTTAATAGTAACAACCCACACCTCACCCACTAGGACTCAATGTTCACAACAGGAAGGACCATTGCTGCATACTCCTTGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp CCCTCAGTAAAGAGAGCTTCTCCTCCACAGTTCAGATGGATTTGCTaGTTGATGAGGTCTGAATTACATGTTCACCCACAAAGCTCAAGG +
Preference number: 1 (lower is better)
Translates to: PSVKRASPPQFRWIC*LMRSELHVHPQSSR
Trigger: CCTTGAGCTTTGTGGGTGAACATGTAATTCAGACCTCATCAATCAGCAAATCCATCTGAACTGTGGAGGAGAAGCTCTCTTTACTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp TTACAGAGCCAGTCAGGTACATCAGCTTTCAGTTTCTTGCTCATCTaGCAAAGAACTTTCAGCTCAGGAGAAGGCCTTATCCTCAATCAG +
Preference number: 1 (lower is better)
Translates to: LQSQSGTSAFSFLLI*QRTFSSGEGLILNQ
Trigger: CTGATTGAGGATAAGGCCTTCTCCTGAGCTGAAAGTTCTTTGGCAGATGAGCAAGAAACTGAAAGCTGATGTACCTGACTGGCTCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp TTGCTTAAGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTaGCTATATCCCATTCTAGGAATCACTGGATATCCATCTGGAGTG +
Preference number: 1 (lower is better)
Translates to: LLKGVCQCRVHRIVL*LYPILGITGYPSGV
Trigger: CACTCCAGATGGATATCCAGTGATTCCTAGAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCTTAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp GGTCTTGAAAATCTGGAAATCTGGAGTCCATGGCTGTGGCTACACTaGAAGTTATCTGCTCCAACTATTGCAGAACACTGTAGTGAAATC +
Preference number: 1 (lower is better)
Translates to: GLENLEIWSPWLWLH*KLSAPTIAEHCSEI
Trigger: GATTTCACTACAGTGTTCTGCAATAGTTGGAGCAGATAACTTTCAGTGTAGCCACAGCCATGGACTCCAGATTTCCAGATTTTCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp AGATTGGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTaGTTTTCAAACTGTGTTCGGAAGAGTTCAAGGTGTTGTAAGGAA +
Preference number: 1 (lower is better)
Translates to: RLECHSGQTYCCLGQ*FSNCVRKSSRCCKE
Trigger: TTCCTTACAACACCTTGAACTCTTCCGAACACAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp GATAACAAGAGGTCAAATGTACAAGTTGCTCTAATATGGCCTCAATaGGGCACCAGCTTCAAAACCCGCTTGCTGATAATTCAGGTATTC +
Preference number: 1 (lower is better)
Translates to: DNKRSNVQVALIWPQ*GTSFKTRLLIIQVF
Trigger: GAATACCTGAATTATCAGCAAGCGGGTTTTGAAGCTGGTGCCTCATTGAGGCCATATTAGAGCAACTTGTACATTTGACCTCTTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp AGCAGGGTACCTTCAGAAAGGCCAGCCATACCAATAGCCAGAATATaGTCTGGAAGAACCAGCAGATCAATAAGGAAGTTCTGTAAATTA +
Preference number: 1 (lower is better)
Translates to: SRVPSERPAIPIARI*SGRTSRSIRKFCKL
Trigger: TAATTTACAGAACTTCCTTATTGATCTGCTGGTTCTTCCAGATCATATTCTGGCTATTGGTATGGCTGGCCTTTCTGAAGGTACCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp TATTTAAATAGGATGCTACAGAACACATCCACTCCTAATTGTAGCTaGTTTACACTGGGTGCCATTGTACCATATGCATCAGCCACCCTT +
Preference number: 1 (lower is better)
Translates to: YLNRMLQNTSTPNCS*FTLGAIVPYASATL
Trigger: AAGGGTGGCTGATGCATATGGTACAATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGTGGATGTGTTCTGTAGCATCCTATTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp TGGAACAAACTAGGCCTTTGTTGTGATAAAACAGCTTTAGCTATTTaGCTTGAGGACTCTGACTTCACTATAAAGGGCTGTGCTGAATCT +
Preference number: 1 (lower is better)
Translates to: WNKLGLCCDKTALAI*LEDSDFTIKGCAES
Trigger: AGATTCAGCACAGCCCTTTATAGTGAAGTCAGAGTCCTCAAGCCAAATAGCTAAAGCTGTTTTATCACAACAAAGGCCTAGTTTGTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 90 bp CTGAGTAATTCCAAAGAAGATGCTATGAGGAGTTCACTGTGCCTTTaGTTTGATCCCAATGGGTCAGAATATGTTTTCTCATTCAGTAGG +
Preference number: 1 (lower is better)
Translates to: LSNSKEDAMRSSLCL*FDPNGSEYVFSFSR
Trigger: CCTACTGAATGAGAAAACATATTCTGACCCATTGGGATCAAATCAAAGGCACAGTGAACTCCTCATAGCATCTTCTTTGGAATTACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp AGGCCTTGTTTGACGAGATGTAGAGTCGAGTCATGTAATCACAATTaGCCTAGAGAGAGACAAGGATATAAACAAACTATTTCCAATGTT +
Preference number: 1 (lower is better)
Translates to: RPCLTRCRVESCNHN*PRERQGYKQTISNV
Trigger: AACATTGGAAATAGTTTGTTTATATCCTTGTCTCTCTCTAGGCCAATTGTGATTACATGACTCGACTCTACATCTCGTCAAACAAGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp TTCATGAATTTCAATCATTTGAGATTGTGGGGTGTGGTCCAATGCTaGTCTCAAAAAGATGTTGCCTTTCTTCAGAGAGCATTAATAACT +
Preference number: 1 (lower is better)
Translates to: FMNFNHLRLWGVVQC*SQKDVAFLQRALIT
Trigger: AGTTATTAATGCTCTCTGAAGAAAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGATTGAAATTCATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 90 bp ATGTTCATGAATTTCAATCATTTGAGATTGTGGGGTGTGGTCCAATaGTGCTCTCAAAAAGATGTTGCCTTTCTTCAGAGAGCATTAATA +
Preference number: 1 (lower is better)
Translates to: MFMNFNHLRLWGVVQ*CSQKDVAFLQRALI
Trigger: TATTAATGCTCTCTGAAGAAAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGATTGAAATTCATGAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 90 bp AGTTGTCTTTATGTCTGTTACAATGCCTGCCTTAAATATATATCATaGCAAGGAATGAAGTCAGCTGCTCTGAGTCAGTGTAAAATGACA +
Preference number: 1 (lower is better)
Translates to: SCLYVCYNACLKYIS*QGMKSAALSQCKMT
Trigger: TGTCATTTTACACTGACTCAGAGCAGCTGACTTCATTCCTTGCCATGATATATATTTAAGGCAGGCATTGTAACAGACATAAAGACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCGGTCACTCCGCCAACTaGTGGCTAGGCCCGGAAGAA +
Preference number: 2 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTGHSAN*WLGPEE
Trigger: TTCTTCCGGGCCTAGCCACCAGTTGGCGGAGTGACC...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp TCCTGCCGCATCGTGACAAGCTCTTTCGGGTTCCAGGTCCAGGTCTaGAAAATCTGGAAATCTGGAGTCCATGGCTGTGGCTACACTGAA +
Preference number: 2 (lower is better)
Translates to: SCRIVTSSFGFQVQV*KIWKSGVHGCGYTE
Trigger: TTCAGTGTAGCCACAGCCATGGACTCCAGATTTCCAGATTTTCAAGACCTGGACCTGGAACCCGAAAGAGCTTGTCACGATGCGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAGGAGCATCCTCAGTTTaGACTGAGGGTCTGGACAGA +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRGASSV*TEGLDR
Trigger: TCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCC...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGTTCCTGCCGCATCGTaGCAAGCTCTTTCGGGTTCC +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFVPAAS*QALSGS
Trigger: GGAACCCGAAAGAGCTTGTCACGATGCGGCAGGAAC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTGTCAGAAGGTCCAGGTaGACACTCAGCAATCAGGAG +
Preference number: 2 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLVRRSR*TLSNQE
Trigger: CTCCTGATTGCTGAGTGTTCACCTGGACCTTCTGAC...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGATCCTGTTGTGAACATTaGGTCCTAGTGGGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRSCCEH*VLVGEV
Trigger: CACCTCACCCACTAGGACTCAATGTTCACAACAGGA...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGGGCTGTACCACTTGGTaGGCACCACTCCACAAAACG +
Preference number: 2 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLGCTTW*APLHKT
Trigger: CGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCC...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTATCCTCAGTTTGCACTaGGGGTCTGGACAGAAACTC +
Preference number: 2 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLILSLH*GSGQKL
Trigger: GAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGAT...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp AGAACACATCCACTCCTAATTGTAGCTGCTTTACACTGGGTGCCATaGTACCATATGCATCAGCCACCCTTCAGGCACCCCATGGTGAAA +
Preference number: 2 (lower is better)
Translates to: RTHPLLIVAALHWVP*YHMHQPPFRHPMVK
Trigger: TTTCACCATGGGGTGCCTGAAGGGTGGCTGATGCATATGGTACAATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGTGGATGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGCAGAGGAGGAAACTaGGGCGCAGACAAATTACAG +
Preference number: 2 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPGRGGN*GADKLQ
Trigger: CTGTAATTTGTCTGCGCCTCAGTTTCCTCCTCTGCC...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCACCAGGTCTGTAGGCTaGTGGAATAGCACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPTRSVG*WNSTGK
Trigger: CTTCCCTGTGCTATTCCATCAGCCTACAGACCTGGT...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGATCTTCAGGAATTCCATaGCAGGTTCAGTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRSSGIP*QVQSLP
Trigger: TGGAAGAGACTGAACCTGGCATGGAATTCCTGAAGA...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAAAGAGAAGCCTTTTCTaGAATCTGGTGCAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRKRSLF*NLVQPC
Trigger: ACAAGGCTGCACCAGATTCCAGAAAAGGCTTCTCTT...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp TTTGTTGAGGGCGAGCAGTCTACAGCAACCAGACCTAGGCCTTGTTaGACGAGATGTAGAGTCGAGTCATGTAATCACAATTGGCCTAGA +
Preference number: 2 (lower is better)
Translates to: FVEGEQSTATRPRPC*TRCRVESCNHNWPR
Trigger: TCTAGGCCAATTGTGATTACATGACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTCTGGTTGCTGTAGACTGCTCGCCCTCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGTGAAGGGTCCCAAATaGCATCTAGGCCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQAVKGPK*HLGLSF
Trigger: GAAACTGAGGCCTAGATGTCATTTGGGACCCTTCAC...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTGCTTCAAAATGGTTGTaGAGGGTCCCAAATGACATC +
Preference number: 2 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGASKWL*RVPNDI
Trigger: GATGTCATTTGGGACCCTTCACAACCATTTTGAAGC...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCTTCAGTCTCTTCCAGTaGGCCCGCTTGCTAAAAGTC +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFFSLFQ*ARLLKV
Trigger: GACTTTTAGCAAGCGGGCTCACTGGAAGAGACTGAA...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGACCTAGGCCTTGTTTaGCGAGATGTAGAGTCGAGT +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPDLGLV*RDVESS
Trigger: ACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTTACCTCCAGTGTTCCTaGCGCATCGTGACAAGCTCT +
Preference number: 2 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLYLQCS*RIVTSS
Trigger: AGAGCTTGTCACGATGCGGCAGGAACACTGGAGGTA...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp GAGTCTATGCTACATCTGGGAGTGACAGGGTCAGCAGAGCCAGATTaGTCAAAGTTGGCCCTACTTTCTTTGGTAATCAAGTCGTCATCT +
Preference number: 2 (lower is better)
Translates to: ESMLHLGVTGSAEPD*SKLALLSLVIKSSS
Trigger: AGATGACGACTTGATTACCAAAGAAAGTAGGGCCAACTTTGACAAATCTGGCTCTGCTGACCCTGTCACTCCCAGATGTAGCATAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCTGGCTGTGGCTACACTaGAAGTTATCTGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFWLWLH*KLSAPT
Trigger: AGTTGGAGCAGATAACTTTCAGTGTAGCCACAGCCA...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGCTGGTGGTAGTGCTTaGTCAGTCGTTGTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPAGGSA*SVVVSF
Trigger: AAAAGAGACAACGACTGAGCAAGCACTACCACCAGC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGACCAATGTTTAACCAGTaGATTCATTCGAGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRPMFNQ*IHSSSS
Trigger: TGAGCTACTCGAATGAATGCACTGGTTAAACATTGG...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCTTTGCACTGAGGGTCTaGACAGAAACTCAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFFALRV*TETQVF
Trigger: GAAGACCTGAGTTTCTGTCCAGACCCTCAGTGCAAA...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCCACTGGATATCCATCTaGAGTGGAGGGCTGTTAATC +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPHWISI*SGGLLI
Trigger: GATTAACAGCCCTCCACTCCAGATGGATATCCAGTG...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp TTCCCCTGCACTGGCTTCATTCTCTACATGGTAGGCCCTGTTAGTTaGAGGTTTTCATCCTACAAAGCTAAAGCACCCTCAGTAAAGAGA +
Preference number: 2 (lower is better)
Translates to: FPCTGFILYMVGPVS*RFSSYKAKAPSVKR
Trigger: TCTCTTTACTGAGGGTGCTTTAGCTTTGTAGGATGAAAACCTCAAACTAACAGGGCCTACCATGTAGAGAATGAAGCCAGTGCAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCATCAGGCACCCCATGGTaGAAGAAAAGGATTCAGAAT +
Preference number: 2 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQASGTPW*KKRIQN
Trigger: ATTCTGAATCCTTTTCTTTCACCATGGGGTGCCTGA...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCTGCTTTACACTGGGTaGCATTGTACCATATGCATC +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFLLYTG*HCTICI
Trigger: GATGCATATGGTACAATGGCACCCAGTGTAAAGCAG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGCAATTTCAGGAAGTTTaGGGATCCCCAACTCCAATC +
Preference number: 2 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLQFQEV*GSPTPI
Trigger: GATTGGAGTTGGGGATCCCCAAACTTCCTGAAATTG...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCAATCATTTGAGATTGTaGGGTGTGGTCCAATGCTGC +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFNHLRL*GVVQCC
Trigger: GCAGCATTGGACCACACCCCACAATCTCAAATGATT...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGCAAATGATCATTCCTaGGGTCAAAGACATGCCTGT +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPANDHS*GQRHAC
Trigger: ACAGGCATGTCTTTGACCCCAGGAATGATCATTTGC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGATATCCATCTGGAGTaGAGGGCTGTTAATCTAGGT +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFDIHLE*RAVNLG
Trigger: ACCTAGATTAACAGCCCTCCACTCCAGATGGATATC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGACTAGTGGGTGAGGTGTaGGTTGTTACTATTAAAAAT +
Preference number: 2 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRLVGEV*VVTIKN
Trigger: ATTTTTAATAGTAACAACCCACACCTCACCCACTAG...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp TTTCTGATCTTACAGAGCCAGTCAGGTACATCAGCTTTCAGTTTCTaGCTCATCTGCCAAAGAACTTTCAGCTCAGGAGAAGGCCTTATC +
Preference number: 2 (lower is better)
Translates to: FLILQSQSGTSAFSF*LICQRTFSSGEGLI
Trigger: GATAAGGCCTTCTCCTGAGCTGAAAGTTCTTTGGCAGATGAGCAAGAAACTGAAAGCTGATGTACCTGACTGGCTCTGTAAGATCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTGGATCAAGTAATGGATaGCAACCATGGTCGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLGSSNG*QPWSWN
Trigger: ATTCCACGACCATGGTTGTCATCCATTACTTGATCC...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTAAAAGTTCTGGTTCCTaGGTAATTCCAAAGAAGATG +
Preference number: 2 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLKSSGS*VIPKKM
Trigger: CATCTTCTTTGGAATTACTCAGGAACCAGAACTTTT...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCACTCCTAATTGTAGCTaGTTTACACTGGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFTPNCS*FTLGAI
Trigger: AATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGT...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTAAGTCGGTCACAAAATaGTTGATGTATCAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLKSVTK*LMYQEK
Trigger: CTTCTCTTGATACATCAAGCATTTTGTGACCGACTT...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCACAGCTTTAGCTATTTaGCTTGAGGACTCTGACTTC +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPTALAI*LEDSDF
Trigger: GAAGTCAGAGTCCTCAAGCCAAATAGCTAAAGCTGT...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp AGACTTCAAAGTCATGTACTTCAAGTACCAGTAGAGCATCTGGTGTaGCTTAAGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTC +
Preference number: 2 (lower is better)
Translates to: RLQSHVLQVPVEHLV*LKGVCQCRVHRIVL
Trigger: GAGAACAATTCTATGCACCCTACACTGACAGACTCCCTTAAGCAACACCAGATGCTCTACTGGTACTTGAAGTACATGACTTTGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTGTGGAATATGGTCAATaGGAGTCAGAAAAGTACAGG +
Preference number: 2 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLVEYGQ*ESEKYR
Trigger: CCTGTACTTTTCTGACTCTCATTGACCATATTCCAC...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGTCAAAACCCAAGGATTaGGGAACTGCTAAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLSKPKD*GTAKFS
Trigger: AGAAAACTTAGCAGTTCCCCAATCCTTGGGTTTTGA...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCATGGTCGTGGAATATaGTCAATGAGAGTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: RESVSVGCIELFSGYIPFHGRGI*SMRVRK
Trigger: TTTTCTGACTCTCATTGACCATATTCCACGACCATG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGACATAATTCACTTTaGATGGAGCATCCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPGHNSL*MEHPQF
Trigger: AAACTGAGGATGCTCCATCCAAAGTGAATTATGTCC...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR TCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAAGCATGAAGAAATTGTaGTTCTTAACTCTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPSMKKL*FLTLLG
Trigger: ACCCAGAAGAGTTAAGAATCACAATTTCTTCATGCT...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGTCAAATGTACAAGTTaGTCTAATATGGCCTCAATG +
Preference number: 2 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPVKCTS*SNMASM
Trigger: CATTGAGGCCATATTAGAGCAACTTGTACATTTGAC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR GCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAACCCGAATATCCATTATaGATAGAAACAGCTCACATA +
Preference number: 2 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKPEYPL*IETAHI
Trigger: TATGTGAGCTGTTTCTATGCATAATGGATATTCGGG...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp AACAAAGAAGCAAAAACTGGCATCTTGGACATCCTAGTATTACACTaGCAAGCAATTAGAACACAAGGAGGGCCAAGGAAAAAGTTTAGC +
Preference number: 2 (lower is better)
Translates to: NKEAKTGILDILVLH*QAIRTQGGPRKKFS
Trigger: GCTAAACTTTTTCCTTGGCCCTCCTTGTGTTCTAATTGCTTGCAAGTGTAATACTAGGATGTCCAAGATGCCAGTTTTTGCTTCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 90 bp CTTCAGCAAATGATCATTCCTGGGGTCAAAGACATGCCTGTCTTCTaGCACTTTTCTAAGTTCACACACAGTATTTCTAAGAATGTTCAG +
Preference number: 2 (lower is better)
Translates to: LQQMIIPGVKDMPVF*HFSKFTHSISKNVQ
Trigger: CTGAACATTCTTAGAAATACTGTGTGTGAACTTAGAAAAGTGCAAGAAGACAGGCATGTCTTTGACCCCAGGAATGATCATTTGCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp AGGAGTGGAGGTAAAGGCCACATCATGATGGCTGAATaGCTCCTGGGTCACAGTGGTCCACTGGAATGGGTG +
Preference number: 3 (lower is better)
Translates to: RSGGKGHIMMAE*LLGHSGPLEWV
Trigger: CACCCATTCCAGTGGACCACTGTGACCCAGGAGGCATTCAGCCATCATGATGTGGCCTTTACCTCCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp AGCTATCGGAAATGCCCAGCAAGTAAGCTAATGGCCTaGTCAAAGGGCCAGCCTCCAACTCTCCCTACCACC +
Preference number: 3 (lower is better)
Translates to: SYRKCPASKLMA*SKGQPPTLPTT
Trigger: GGTGGTAGGGAGAGTTGGAGGCTGGCCCTTTGAGCAGGCCATTAGCTTACTTGCTGGGCATTTCCGATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp CCCCCAAACCGCACATTCCCACAATTTCAGGAAGTTTaGGGATCCCCAACTCCAATCCAAGGTTCCCAGGTT +
Preference number: 3 (lower is better)
Translates to: PPNRTFPQFQEV*GSPTPIQGSQV
Trigger: AACCTGGGAACCTTGGATTGGAGTTGGGGATCCCCAAACTTCCTGAAATTGTGGGAATGTGCGGTTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp ATCTCGGGCAAAAATCCAGGTACCAGGTCTGTAGGCTaGTGGAATAGCACAGGGAAGGTAGTCAGAAGGTCC +
Preference number: 3 (lower is better)
Translates to: ISGKNPGTRSVG*WNSTGKVVRRS
Trigger: GGACCTTCTGACTACCTTCCCTGTGCTATTCCATCAGCCTACAGACCTGGTACCTGGATTTTTGCCCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp TCAACCCCACACACATTGATAGGCAGAGGAGGAAACTaGGGCGCAGACAAATTACAGAGTGACTCGCCTAAG +
Preference number: 3 (lower is better)
Translates to: STPHTLIGRGGN*GADKLQSDSPK
Trigger: CTTAGGCGAGTCACTCTGTAATTTGTCTGCGCCTCAGTTTCCTCCTCTGCCTATCAATGTGTGTGGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp GTGTGTACTGGTGAATCGGACTCATTTCTGCACTACTaGAGGAGAGAAATGGACGCGGCTTTCGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: VCTGESDSFLHY*RREMDAAFELL
Trigger: CAGCAGTTCGAAAGCCGCGTCCATTTCTCTCCTTCAGTAGTGCAGAAATGAGTCCGATTCACCAGTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGTTAGGGCTGTACCACTaGGTGAGCACCACTCCACAA +
Preference number: 3 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLLGLYH*VSTTPQ
Trigger: TTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAA...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp GAGGTTCTGTTTAGGAGTCTATGCTACATCTGGGAGTaGCAGGGTCAGCAGAGCCAGATTTGTCAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: EVLFRSLCYIWE*QGQQSQICQSW
Trigger: CCAACTTTGACAAATCTGGCTCTGCTGACCCTGTCACTCCCAGATGTAGCATAGACTCCTAAACAGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGCCCCCTTGGAAAACTaGCTAGCGATGGATCATCAT +
Preference number: 3 (lower is better)
Translates to: RESVSVGCIELFSGYIPFAPLEN*LAMDHH
Trigger: ATGATGATCCATCGCTAGCAAGTTTTCCAAGGGGGC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATCCAAGCAGGGGACTGTaGTTAACCCCGAATATCCAT +
Preference number: 3 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENPSRGL*LTPNIH
Trigger: ATGGATATTCGGGGTTAACAACAGTCCCCTGCTTGG...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTTCCAGGTCCAGGTCTaGAAAATCTGGAAATCTGGA +
Preference number: 3 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLFQVQV*KIWKSG
Trigger: TCCAGATTTCCAGATTTTCAAGACCTGGACCTGGAA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAATCAACCCCACACACATaGATAGGCAGAGGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKSTPHT*IGRGGN
Trigger: GTTTCCTCCTCTGCCTATCAATGTGTGTGGGGTTGA...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGATGGACATCTCATGTTTaGCCACAGAATTTCAAGCTT +
Preference number: 3 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRWTSHV*PQNFKL
Trigger: AAGCTTGAAATTCTGTGGCAAAACATGAGATGTCCA...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGTGCTTGCTCAGTCGTaGTCTCTTTTCTCACAGCAA +
Preference number: 3 (lower is better)
Translates to: RESVSVGCIELFSGYIPFVLAQS*SLFSQQ
Trigger: TTGCTGTGAGAAAAGAGACAACGACTGAGCAAGCAC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp GCGAGCAGTCTACAGCAACCAGACCTAGGCCTTGTTTaGCGAGATGTAGAGTCGAGTCATGTAATCACAATT +
Preference number: 3 (lower is better)
Translates to: ASSLQQPDLGLV*RDVESSHVITI
Trigger: AATTGTGATTACATGACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTCTGGTTGCTGTAGACTGCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp GGAGTATGCAGCAATGGTCCTTCCTGTTGTGAACATTaGGTCCTAGTGGGTGAGGTGTGGGTTGTTACTATT +
Preference number: 3 (lower is better)
Translates to: GVCSNGPSCCEH*VLVGEVWVVTI
Trigger: AATAGTAACAACCCACACCTCACCCACTAGGACTCAATGTTCACAACAGGAAGGACCATTGCTGCATACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp CTTCTAATTCCCAGTAACAGTGCTGGTGGTAGTGCTTaGTCAGTCGTTGTCTCTTTTCTCACAGCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: LLIPSNSAGGSA*SVVVSFLTARS
Trigger: TGACCTTGCTGTGAGAAAAGAGACAACGACTGAGCAAGCACTACCACCAGCACTGTTACTGGGAATTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp TTCATCCAGAGCAGCTTCACTTTTACTCTGGGCTTCTaGACAGTTTTCACTCAAAGGGCTTCATGGCCACAA +
Preference number: 3 (lower is better)
Translates to: FIQSSFTFTLGF*TVFTQRASWPQ
Trigger: TTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGTAAAAGTGAAGCTGCTCTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp AATCGGACTCATTTCTGCACTACTGAAGGAGAGAAATaGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: NRTHFCTTEGEK*TRLSNCCIPSR
Trigger: TCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCCTTCAGTAGTGCAGAAATGAGTCCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATTTACACTGGGTGCCATaGTACCATATGCATCAGCCA +
Preference number: 3 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADLHWVP*YHMHQP
Trigger: TGGCTGATGCATATGGTACAATGGCACCCAGTGTAA...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp TCAGTGGTCATGAGTCTGAGAGCCCAACTGTCCTGCTaGTCTGAAGTAAGACAACTAGCCTTCTACATCAAA +
Preference number: 3 (lower is better)
Translates to: SVVMSLRAQLSC*SEVRQLAFYIK
Trigger: TTTGATGTAGAAGGCTAGTTGTCTTACTTCAGATCAGCAGGACAGTTGGGCTCTCAGACTCATGACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp TGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTaGTTTCCCCTGCACTGGCTTCATTCTCTACATGGT +
Preference number: 3 (lower is better)
Translates to: CHQDSSLSIFWL*FPLHWLHSLHG
Trigger: ACCATGTAGAGAATGAAGCCAGTGCAGGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp GGTCTGAATTACATGTTCACCCACAAAGCTCAAGGTTaGGTCAGACTGTCCAAACCACAGACTGAAAATAGG +
Preference number: 3 (lower is better)
Translates to: GLNYMFTHKAQG*VRLSKPQTENR
Trigger: CCTATTTTCAGTCTGTGGTTTGGACAGTCTGACCCAACCTTGAGCTTTGTGGGTGAACATGTAATTCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATCCAAATCTACTGATTTaGAGGTTCCGCAGTAGTTCT +
Preference number: 3 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENPNLLI*RFRSSS
Trigger: AGAACTACTGCGGAACCTCAAAATCAGTAGATTTGG...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGCAAAAACTGGCATCTaGGACATCCTAGTATTACAC +
Preference number: 3 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENAKTGI*DILVLH
Trigger: GTGTAATACTAGGATGTCCAAGATGCCAGTTTTTGC...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp ATAATTCACTTTGGATGGAGCATCCTCAGTTTGCACTaGGGGTCTGGACAGAAACTCAGGTCTTCTAATTCC +
Preference number: 3 (lower is better)
Translates to: IIHFGWSILSLH*GSGQKLRSSNS
Trigger: GGAATTAGAAGACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGTGAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp CCTTCAGAAAGGCCAGCCATACCAATAGCCAGAATATaGTCTGGAAGAACCAGCAGATCAATAAGGAAGTTC +
Preference number: 3 (lower is better)
Translates to: PSERPAIPIARI*SGRTSRSIRKF
Trigger: GAACTTCCTTATTGATCTGCTGGTTCTTCCAGATCATATTCTGGCTATTGGTATGGCTGGCCTTTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp AAGCAGGGGACTGTTGTTAACCCCGAATATCCATTATaGATAGAAACAGCTCACATATCCCAGGGACTCAAA +
Preference number: 3 (lower is better)
Translates to: KQGTVVNPEYPL*IETAHISQGLK
Trigger: TTTGAGTCCCTGGGATATGTGAGCTGTTTCTATGCATAATGGATATTCGGGGTTAACAACAGTCCCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR GCA 72 bp AGGATGCTACAGAACACATCCACTCCTAATTGTAGCTaGTTTACACTGGGTGCCATTGTACCATATGCATCA +
Preference number: 3 (lower is better)
Translates to: RMLQNTSTPNCS*FTLGAIVPYAS
Trigger: TGATGCATATGGTACAATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGTGGATGTGTTCTGTAGCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp TTCACTACTTCATCCAGAGCAGCTTCACTTTTACTCTaGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: FTTSSRAASLLL*ASAQFSLKGLH
Trigger: ATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGTAAAAGTGAAGCTGCTCTGGATGAAGTAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp AGGTCAAATGTACAAGTTGCTCTAATATGGCCTCAATaGGGCACCAGCTTCAAAACCCGCTTGCTGATAATT +
Preference number: 3 (lower is better)
Translates to: RSNVQVALIWPQ*GTSFKTRLLII
Trigger: AATTATCAGCAAGCGGGTTTTGAAGCTGGTGCCTCATTGAGGCCATATTAGAGCAACTTGTACATTTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp AAGAGAGCTTCTCCTCCACAGTTCAGATGGATTTGCTaGTTGATGAGGTCTGAATTACATGTTCACCCACAA +
Preference number: 3 (lower is better)
Translates to: KRASPPQFRWIC*LMRSELHVHPQ
Trigger: TTGTGGGTGAACATGTAATTCAGACCTCATCAATCAGCAAATCCATCTGAACTGTGGAGGAGAAGCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp GATCAAGTAATGGATGACAACCATGGTCGTGGAATATaGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTA +
Preference number: 3 (lower is better)
Translates to: DQVMDDNHGRGI*SMRVRKVQAPV
Trigger: TACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACCATGGTTGTCATCCATTACTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR-3UTR CAA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTTATCTGCTCCAACTATaGCAGAACACTGTAGTGAAA +
Preference number: 3 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLYLLQL*QNTVVK
Trigger: TTTCACTACAGTGTTCTGCAATAGTTGGAGCAGATA...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp GAGCAGATGATCATCTTCATCTTAAGTCATTCCTTTTaGCTGAGTATGGCAGGATTAGAGGGAATGGCAGTA +
Preference number: 3 (lower is better)
Translates to: EQMIIFILSHSF*LSMAGLEGMAV
Trigger: TACTGCCATTCCCTCTAATCCTGCCATACTCAGTCAAAAGGAATGACTTAAGATGAAGATGATCATCTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp TACAGTGGAAACTTTTCTTCTTTTGCTAGGTTGAACTaGTACAGTTCTGTGTGTACTGGTGAATCGGACTCA +
Preference number: 3 (lower is better)
Translates to: YSGNFSSFARLN*YSSVCTGESDS
Trigger: TGAGTCCGATTCACCAGTACACACAGAACTGTACCAGTTCAACCTAGCAAAAGAAGAAAAGTTTCCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp AGAAGATGCTATGAGGAGTTCACTGTGCCTTTGATTTaGTCCCAATGGGTCAGAATATGTTTTCTCATTCAG +
Preference number: 3 (lower is better)
Translates to: RRCYEEFTVPLI*SQWVRICFLIQ
Trigger: CTGAATGAGAAAACATATTCTGACCCATTGGGATCAAATCAAAGGCACAGTGAACTCCTCATAGCATCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR TCA 72 bp TCCAAAGAAGATGCTATGAGGAGTTCACTGTGCCTTTaGTTTGATCCCAATGGGTCAGAATATGTTTTCTCA +
Preference number: 3 (lower is better)
Translates to: SKEDAMRSSLCL*FDPNGSEYVFS
Trigger: TGAGAAAACATATTCTGACCCATTGGGATCAAATCAAAGGCACAGTGAACTCCTCATAGCATCTTCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CCA 72 bp TTCATAGTTATCTCTTGCACACGAAGTAGAGTACCATaGCTGATAACAAGAGGTCAAATGTACAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: FIVISCTRSRVP*LITRGQMYKLL
Trigger: GAGCAACTTGTACATTTGACCTCTTGTTATCAGCCATGGTACTCTACTTCGTGTGCAAGAGATAACTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAGGCGACGAGACAAGATaGCTCCTCCGGTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRGDETR*LLRSAP
Trigger: CGGTGCGGACCGGAGGAGCCATCTTGTCTCGTCGCC...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAAGCAGGCCCCGAAGGGTaGCGCCAGGCCTCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKAGPEG*RQASKP
Trigger: CGGCTTGGAGGCCTGGCGCCACCCTTCGGGGCCTGC...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCCCCAACTGGGTCCTTaGAGGCCCCGAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFPQLGP*RPRRVA
Trigger: CGCCACCCTTCGGGGCCTGCAAGGACCCAGTTGGGG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAGGTCACTCCGCCAACTaGTGGCTAGGCCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRGHSAN*WLGPEE
Trigger: TTCTTCCGGGCCTAGCCACCAGTTGGCGGAGTGACC...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGACCACATCATGATGGCTaGATGCCTCCTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRPHHDG*MPPGSQ
Trigger: CTGTGACCCAGGAGGCATTCAGCCATCATGATGTGG...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTGGCTGAATGCCTCCTaGGTCACAGTGGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLWLNAS*VTVVHW
Trigger: CCAGTGGACCACTGTGACCCAGGAGGCATTCAGCCA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTAGCTTCAGGCACGGTTaGATCCAGGGGCACAAACGC +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGSFRHG*IQGHKR
Trigger: GCGTTTGTGCCCCTGGATCCAACCGTGCCTGAAGCT...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp CCACTCCTAATTGTAGCTGCTTTACACTGGGTGCCATaGTACCATATGCATCAGCCACCCTTCAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PLLIVAALHWVP*YHMHQPPFRHP
Trigger: GGGGTGCCTGAAGGGTGGCTGATGCATATGGTACAATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCTTCGATTTAGGGGCCTaGCTCCCCGGCGACGAGACA +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFFDLGA*LPGDET
Trigger: TGTCTCGTCGCCGGGGAGTCAGGCCCCTAAATCGAA...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGATACCTCCAGTGTTCCTaGCGCATCGTGACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRYLQCS*RIVTSS
Trigger: AGAGCTTGTCACGATGCGGCAGGAACACTGGAGGTA...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGGTTCCTGCCGCATCGTaGCAAGCTCTTTCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLVPAAS*QALSGS
Trigger: GGAACCCGAAAGAGCTTGTCACGATGCGGCAGGAAC...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCATGCTACATCTGGGAGTaGCAGGGTCAGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPCYIWE*QGQQSQ
Trigger: CTGGCTCTGCTGACCCTGTCACTCCCAGATGTAGCA...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGCCCCAAGAGCTGGATaGCAGAGCAGGAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFAPRAG*QSRRKS
Trigger: GCTCTTTCTCCTGCTCTGGCATCCAGCTCTTGGGGC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATCCGCCGCCCGAGTTCTaGGTACGAGAAGAAAGACGC +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADPPPEF*VREERR
Trigger: GCGTCTTTCTTCTCGTACGCAGAACTCGGGCGGCGG...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGCCTCCTGGGTCACAGTaGTCCACTGGAATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLPPGSQ*STGMGV
Trigger: GACACCCATTCCAGTGGACCACTGTGACCCAGGAGG...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp ATCGTGACAAGCTCTTTCGGGTTCCAGGTCCAGGTCTaGAAAATCTGGAAATCTGGAGTCCATGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IVTSSFGFQVQV*KIWKSGVHGCG
Trigger: GCCACAGCCATGGACTCCAGATTTCCAGATTTTCAAGACCTGGACCTGGAACCCGAAAGAGCTTGTCACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCGGCAGAGGAGGAAACTaGGGCGCAGACAAATTACAG +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSGRGGN*GADKLQ
Trigger: CTGTAATTTGTCTGCGCCTCAGTTTCCTCCTCTGCC...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCGGCTCTGCTTTCCCCTaGACTGGCTTCATTCTCTAC +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSGSAFP*TGFILY
Trigger: GTAGAGAATGAAGCCAGTGCAGGGGAAAGCAGAGCC...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCGTCACAGTGGTCCACTaGAATGGGTGTCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSVTVVH*NGCLRQ
Trigger: CTGACGAAGACACCCATTCCAGTGGACCACTGTGAC...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCGACCTAGGCCTTGTTTaGCGAGATGTAGAGTCGAGT +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTDLGLV*RDVESS
Trigger: ACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTC...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTGCCCAACTGTCCTGCTaGTCTGAAGTAAGACAACTA +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGAQLSC*SEVRQL
Trigger: TAGTTGTCTTACTTCAGATCAGCAGGACAGTTGGGC...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCGTGAAGGGTCCCAAATaGCATCTAGGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTVKGPK*HLGLSF
Trigger: GAAACTGAGGCCTAGATGTCATTTGGGACCCTTCAC...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTGGCTGTACCACTTGGTaGGCACCACTCCACAAAACG +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLGCTTW*APLHKT
Trigger: CGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCC...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGGAGCATCCTCAGTTTaGACTGAGGGTCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQAGASSV*TEGLDR
Trigger: TCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCC...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATAGTAAGCTAATGGCCTaGTCAAAGGGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENSKLMA*SKGQPP
Trigger: TGGAGGCTGGCCCTTTGAGCAGGCCATTAGCTTACT...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGACGCGGCTTTCGAACTaGTGTATTCCTTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLTRLSN*CIPSRP
Trigger: GGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGT...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTGCTTTCCCCTGCACTaGCTTCATTCTCTACATGGT +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLCFPLH*LHSLHG
Trigger: ACCATGTAGAGAATGAAGCCAGTGCAGGGGAAAGCA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp GGCGAGCAGTCTACAGCAACCAGACCTAGGCCTTGTTaGACGAGATGTAGAGTCGAGTCATGTAATCACAAT +
Preference number: 4 (lower is better)
Translates to: GEQSTATRPRPC*TRCRVESCNHN
Trigger: ATTGTGATTACATGACTCGACTCTACATCTCGTCAAACAAGGCCTAGGTCTGGTTGCTGTAGACTGCTCGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTACCAGGTCTGTAGGCTaGTGGAATAGCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLTRSVG*WNSTGK
Trigger: CTTCCCTGTGCTATTCCATCAGCCTACAGACCTGGT...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAAAAAACAGGGTCCAGTaGCCTTCACGGGATCCTAGA +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQAKNRVQ*PSRDPR
Trigger: TCTAGGATCCCGTGAAGGTCACTGGACCCTGTTTTT...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTGATTTAGATGAGATCTaGGGCATGGAGACATGGAGA +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGDLDEI*GMETWR
Trigger: TCTCCATGTCTCCATGCCTCAGATCTCATCTAAATC...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTAATTGCAGCAACATGTaGAAAAGGCAGGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLNCSNM*KRQARA
Trigger: AGCTCTTGCCTGCCTTTTTCACATGTTGCTGCAATT...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTCCTGTTGTGAACATTaGGTCCTAGTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPSCCEH*VLVGEV
Trigger: CACCTCACCCACTAGGACTCAATGTTCACAACAGGA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTTCTGTGTGTACTGGTaGATCGGACTCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLFCVYW*IGLISA
Trigger: TGCAGAAATGAGTCCGATTCACCAGTACACACAGAA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTACTGTCCTGCTGATCTaGAGTAAGACAACTAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLTVLLI*SKTTSL
Trigger: AAGGCTAGTTGTCTTACTTCAGATCAGCAGGACAGT...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTCAGGCACCCCATGGTaGAAGAAAAGGATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLSGTPW*KKRIQN
Trigger: ATTCTGAATCCTTTTCTTTCACCATGGGGTGCCTGA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTGGATCAAGTAATGGATaGCAACCATGGTCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGGSSNG*QPWSWN
Trigger: ATTCCACGACCATGGTTGTCATCCATTACTTGATCC...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAATCATGATGGCTGAATaGCTCCTGGGTCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQAIMMAE*LLGHSG
Trigger: ACCACTGTGACCCAGGAGGCATTCAGCCATCATGAT...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCTCAGGCCCCTACTCTTaGTTCACTACTTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSSGPYS*FTTSSR
Trigger: TCTGGATGAAGTAGTGAAGCAAGAGTAGGGGCCTGA...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTCTTCAGGAATTCCATaGCAGGTTCAGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLSSGIP*QVQSLP
Trigger: TGGAAGAGACTGAACCTGGCATGGAATTCCTGAAGA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTGTGTTTGTGTTCACTTaGTTAGGGCTGTACCACTTG +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGVFVFT*LGLYHL
Trigger: CAAGTGGTACAGCCCTAAGCAAGTGAACACAAACAC...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTAATCATTTGAGATTGTaGGGTGTGGTCCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGNHLRL*GVVQCC
Trigger: GCAGCATTGGACCACACCCCACAATCTCAAATGATT...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGCCTTTTCTGGAATCTaGTGCAGCCTTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENAFSGI*CSLVRC
Trigger: GCATCTCACAAGGCTGCACCAGATTCCAGAAAAGGC...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCATGCTGTCTGGGGCAGTaGTTTTCAAACTGTGTTCGG +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPCCLGQ*FSNCVR
Trigger: CCGAACACAGTTTGAAAACCACTGCCCCAGACAGCA...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAATGAACTGTGCTGAGTaGAGGTACAGAAAAGATTGG +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRMNCAE*RYRKDW
Trigger: CCAATCTTTTCTGTACCTCCACTCAGCACAGTTCAT...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTGTCAAGGCCTCAGATTaGTTGAATGGTGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLVKASD*LNGAVQ
Trigger: TTGAACAGCACCATTCAACCAATCTGAGGCCTTGAC...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCTAATATGGCCTCAATaGGGCACCAGCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFLIWPQ*GTSFKT
Trigger: GGTTTTGAAGCTGGTGCCTCATTGAGGCCATATTAG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCCAGATTTTATTTGTTaGGGGCGAGCAGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFPDFIC*GRAVYS
Trigger: GCTGTAGACTGCTCGCCCTCAACAAATAAAATCTGG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCAGGCCTCAGATTGGTTaGATGGTGCTGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSRPQIG*MVLFKD
Trigger: ATCTTTGAACAGCACCATTCAACCAATCTGAGGCCT...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATTTGAGTCCTAGTGGGTaGGGTGTGGGTTGTTACTAT +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENLSPSG*GVGCYY
Trigger: ATAGTAACAACCCACACCTCACCCACTAGGACTCAA...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTCATTTCTGCACTACTaGAGGAGAGAAATGGACGCG +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPSFLHY*RREMDA
Trigger: CGCGTCCATTTCTCTCCTTCAGTAGTGCAGAAATGA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTCATTTCTCTGGAAGTaGGATTATCTGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTSFLWK*DYLSLP
Trigger: GGGCAGAGACAGATAATCTCACTTCCAGAGAAATGA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTCTGTCAGTGTAGGGTaGATAGAATTGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTSVSVG*IELFSG
Trigger: GCCAGAGAACAATTCTATGCACCCTACACTGACAGA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGCTGGTCAAGGAGTATaGAGCAATGGTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADAGQGV*SNGPSC
Trigger: ACAGGAAGGACCATTGCTGCATACTCCTTGACCAGC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCCTGCTTTACACTGGGTaGCATTGTACCATATGCATC +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTLLYTG*HCTICI
Trigger: GATGCATATGGTACAATGGCACCCAGTGTAAAGCAG...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCAGTGGTCCACTGGAATaGGTGTCTTCGTCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPSGPLE*VSSSVV
Trigger: TACTACTGACGAAGACACCCATTCCAGTGGACCACT...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCAAGAGAAGCCTTTTCTaGAATCTGGTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSKRSLF*NLVQPC
Trigger: ACAAGGCTGCACCAGATTCCAGAAAAGGCTTCTCTT...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTGCTTCACTTTTACTCTaGGCTTCTGCACAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLASLLL*ASAQFS
Trigger: TGAAAACTGTGCAGAAGCCCAGAGTAAAAGTGAAGC...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATCACTGGATATCCATCTaGAGTGGAGGGCTGTTAATC +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENHWISI*SGGLLI
Trigger: GATTAACAGCCCTCCACTCCAGATGGATATCCAGTG...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp GGAGTGACAGGGTCAGCAGAGCCAGATTTGTCAAAGTaGGCCCTACTTTCTTTGGTAATCAAGTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: GVTGSAEPDLSK*ALLSLVIKSSS
Trigger: AGATGACGACTTGATTACCAAAGAAAGTAGGGCCAACTTTGACAAATCTGGCTCTGCTGACCCTGTCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp CTACATCTGGGAGTGACAGGGTCAGCAGAGCCAGATTaGTCAAAGTTGGCCCTACTTTCTTTGGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: LHLGVTGSAEPD*SKLALLSLVIK
Trigger: CTTGATTACCAAAGAAAGTAGGGCCAACTTTGACAAATCTGGCTCTGCTGACCCTGTCACTCCCAGATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATTGGCTGTGGCTACACTaGAAGTTATCTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADWLWLH*KLSAPT
Trigger: AGTTGGAGCAGATAACTTTCAGTGTAGCCACAGCCA...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAATCCTCAGTTTGCACTaGGGGTCTGGACAGAAACTC +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTILSLH*GSGQKL
Trigger: GAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGAT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCACTGTGCCTTTGATTTaGTCCCAATGGGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSTVPLI*SQWVRI
Trigger: TATTCTGACCCATTGGGATCAAATCAAAGGCACAGT...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCAGTTCACTGTGCCTTTaGTTTGATCCCAATGGGTCA +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFSSLCL*FDPNGS
Trigger: TGACCCATTGGGATCAAATCAAAGGCACAGTGAACT...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGAAAAAGTTCTGGTTCCTaGGTAATTCCAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRKSSGS*VIPKKM
Trigger: CATCTTCTTTGGAATTACTCAGGAACCAGAACTTTT...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGGAACATGAACTGTGCTaGGTGGAGGTACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLEHELC*VEVQKR
Trigger: TCTTTTCTGTACCTCCACTCAGCACAGTTCATGTTC...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTCTCCTTGTTCAACATaGTCTGGTCTGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTSPCST*SGLRVH
Trigger: ATGAACTCTCAGACCAGATCATGTTGAACAAGGAGA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCGTTCAAAGATTTAGATaGGATCTGAGGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSVQRFR*DLRHGD
Trigger: GTCTCCATGCCTCAGATCTCATCTAAATCTTTGAAC...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCAACTCAGCCGATCTCTaGGAATCATCTTACAAGCAA +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTNSADL*ESSYKQ
Trigger: TTGCTTGTAAGATGATTCTCAGAGATCGGCTGAGTT...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCACTGGATACAGTTTTCTaGTCTTACAGAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPLDTVF*SYRASQ
Trigger: CTGACTGGCTCTGTAAGATCAGAAAACTGTATCCAG...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAAAAGGCAGGCAAGAGCTaGGTCAGGAAAATAGACAAG +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKKAGKS*VRKIDK
Trigger: CTTGTCTATTTTCCTGACTCAGCTCTTGCCTGCCTT...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATGGTCCTTCCTGTTGTaGACATTGAGTCCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTWSFLL*TLSPSG
Trigger: CCCACTAGGACTCAATGTTCACAACAGGAAGGACCA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCCTCTGCTTAAGAAGTTaGATGGTAACAGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPLCLRS*MVTAGM
Trigger: CATGCCAGCTGTTACCATTCAACTTCTTAAGCAGAG...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCGTGGAATATGGTCAATaGGAGTCAGAAAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTVEYGQ*ESEKYR
Trigger: CCTGTACTTTTCTGACTCTCATTGACCATATTCCAC...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATTCAGTCTCTTCCAGTaGGCCCGCTTGCTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTFSLFQ*ARLLKV
Trigger: GACTTTTAGCAAGCGGGCTCACTGGAAGAGACTGAA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGCTGGTGGTAGTGCTTaGTCAGTCGTTGTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADAGGSA*SVVVSF
Trigger: AAAAGAGACAACGACTGAGCAAGCACTACCACCAGC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGGTGTGGTCCAATGCTaGTCTCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADGVVQC*SQKDVA
Trigger: GGCAACATCTTTTTGAGAGCAGCATTGGACCACACC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTTTTCTGGAATCTGGTaGAGCCTTGTGAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPFSGIW*SLVRCC
Trigger: ACAGCATCTCACAAGGCTGCACCAGATTCCAGAAAA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCTCAGGTCAAACATATTaGTGTCTGGGGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RESVSVGCIELFSGYIPFSGQTY*CLGQWF
Trigger: AAACCACTGCCCCAGACAGCAATATGTTTGACCTGA...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTAAGGGGCAATATAACTaGTACTGGTTGAGTCATACA +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGKGQYN*YWLSHT
Trigger: TGTATGACTCAACCAGTAGCAGTTATATTGCCCCTT...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTTTTGCACTGAGGGTCTaGACAGAAACTCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLFALRV*TETQVF
Trigger: GAAGACCTGAGTTTCTGTCCAGACCCTCAGTGCAAA...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCCGAAGTAGAGTACCATaGCTGATAACAAGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSRSRVP*LITRGQ
Trigger: TTGACCTCTTGTTATCAGCCATGGTACTCTACTTCG...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAACTGAAGGAGAGAAATaGACGCGGCTTTCGAACTGC +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTTEGEK*TRLSNC
Trigger: GCAGTTCGAAAGCCGCGTCCATTTCTCTCCTTCAGT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTAGTCTCTCCATATTTTaGCTCTGCTTTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLSLSIF*LCFPLH
Trigger: GTGCAGGGGAAAGCAGAGCCAAAATATGGAGAGACT...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCACAATTTCAGGAAGTTTaGGGATCCCCAACTCCAATC +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPQFQEV*GSPTPI
Trigger: GATTGGAGTTGGGGATCCCCAAACTTCCTGAAATTG...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTTCAAAACCCAAGGATTaGGGAACTGCTAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGSKPKD*GTAKFS
Trigger: AGAAAACTTAGCAGTTCCCCAATCCTTGGGTTTTGA...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp AGGAAGATAGTTGTAGCAGGATTCAGGCCCCTACTCTaGCTTCACTACTTCATCCAGAGCAGCTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: RKIVVAGFRPLL*LHYFIQSSFTF
Trigger: AAAAGTGAAGCTGCTCTGGATGAAGTAGTGAAGCAAGAGTAGGGGCCTGAATCCTGCTACAACTATCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp AGTCATGTACTTCAAGTACCAGTAGAGCATCTGGTGTaGCTTAAGGGAGTCTGTCAGTGTAGGGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: SHVLQVPVEHLV*LKGVCQCRVHR
Trigger: TCTATGCACCCTACACTGACAGACTCCCTTAAGCAACACCAGATGCTCTACTGGTACTTGAAGTACATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATTCCCTCCTTTCTGCTaGGGAAAGCATCTTATCACC +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTFPPFC*GKHLIT
Trigger: GGTGATAAGATGCTTTCCTCAGCAGAAAGGAGGGAA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAAACCATCTTCAGCAAATaGTCATTCCTGGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKTIFSK*SFLGSK
Trigger: CTTTGACCCCAGGAATGATCATTTGCTGAAGATGGT...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATCTTCTTTTGCTAGGTTaGACTGGTACAGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENLLLLG*TGTVLC
Trigger: ACACAGAACTGTACCAGTTCAACCTAGCAAAAGAAG...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCATTGGTTCACATAACTaGAAAGTCCAGGGGATATTC +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSIGSHN*KVQGIF
Trigger: GAATATCCCCTGGACTTTTCAGTTATGTGAACCAAT...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAAGCTTCAAAATGGTTGTaGAGGGTCCCAAATGACATC +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKASKWL*RVPNDI
Trigger: GATGTCATTTGGGACCCTTCACAACCATTTTGAAGC...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTTGGGGTGTGGTCCAATaGTGCTCTCAAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLWGVVQ*CSQKDV
Trigger: AACATCTTTTTGAGAGCAGCATTGGACCACACCCCA...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCATAAGCTATCGGAAATaGCCAGCAAGTAAGCTAATG +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSISYRK*PASKLM
Trigger: CATTAGCTTACTTGCTGGGCATTTCCGATAGCTTAT...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTCCCGAATATCCATTATaGATAGAAACAGCTCACATA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLPEYPL*IETAHI
Trigger: TATGTGAGCTGTTTCTATGCATAATGGATATTCGGG...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAACAGGTCTTGAAAATCTaGAAATCTGGAGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKQVLKI*KSGVHG
Trigger: GCCATGGACTCCAGATTTCCAGATTTTCAAGACCTG...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCGGACATAATTCACTTTaGATGGAGCATCCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSGHNSL*MEHPQF
Trigger: AAACTGAGGATGCTCCATCCAAAGTGAATTATGTCC...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAACAGCTTTAGCTATTTaGCTTGAGGACTCTGACTTC +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQATALAI*LEDSDF
Trigger: GAAGTCAGAGTCCTCAAGCCAAATAGCTAAAGCTGT...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGCAAATGATCATTCCTaGGGTCAAAGACATGCCTGT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADANDHS*GQRHAC
Trigger: ACAGGCATGTCTTTGACCCCAGGAATGATCATTTGC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGATATCCATCTGGAGTaGAGGGCTGTTAATCTAGGT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADDIHLE*RAVNLG
Trigger: ACCTAGATTAACAGCCCTCCACTCCAGATGGATATC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCCATTCTAGGAATCACTaGATATCCATCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPHSRNH*ISIWSG
Trigger: TCCACTCCAGATGGATATCCAGTGATTCCTAGAATG...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTCAATATAACTGCTACTaGTTGAGTCATACAGTGATG +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLQYNCY*LSHTVM
Trigger: CATCACTGTATGACTCAACCAGTAGCAGTTATATTG...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTCCTACCACCTATATTTaGTGGTATCAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLPTTYI*WYQTSK
Trigger: TTTTGATGTCTGATACCACCAAATATAGGTGGTAGG...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCAGCCAGAATATGATCTaGAAGAACCAGCAGATCAAT +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTSQNMI*KNQQIN
Trigger: ATTGATCTGCTGGTTCTTCCAGATCATATTCTGGCT...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTCTAGTGGGTGAGGTGTaGGTTGTTACTATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLLVGEV*VVTIKN
Trigger: ATTTTTAATAGTAACAACCCACACCTCACCCACTAG...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCCATGGTCGTGGAATATaGTCAATGAGAGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSHGRGI*SMRVRK
Trigger: TTTTCTGACTCTCATTGACCATATTCCACGACCATG...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCTTAAGTCATTCCTTTTaGCTGAGTATGGCAGGATTA +
Preference number: 4 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSLSHSF*LSMAGL
Trigger: TAATCCTGCCATACTCAGTCAAAAGGAATGACTTAA...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACACCAATAGCCAGAATATaGTCTGGAAGAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTPIARI*SGRTSR
Trigger: TCTGCTGGTTCTTCCAGATCATATTCTGGCTATTGG...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACACTGGGGTCAAAGACATaGCTGTCTTCTTGCACTTTT +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTLGSKT*LSSCTF
Trigger: AAAAGTGCAAGAAGACAGGCATGTCTTTGACCCCAG...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCGTCAAATGTACAAGTTaGTCTAATATGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTVKCTS*SNMASM
Trigger: CATTGAGGCCATATTAGAGCAACTTGTACATTTGAC...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCCCAATGTTTAACCAGTaGATTCATTCGAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPPMFNQ*IHSSSS
Trigger: TGAGCTACTCGAATGAATGCACTGGTTAAACATTGG...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATTTCAACCTCCAATCCTaGACATCTCATGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADFNLQS*TSHVLP
Trigger: TGGCAAAACATGAGATGTCCAGGATTGGAGGTTGAA...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCATTTGCTAGGTTGAACTaGTACAGTTCTGTGTGTACT +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQAFARLN*YSSVCT
Trigger: AGTACACACAGAACTGTACCAGTTCAACCTAGCAAA...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTCGAGATATTCCTATATaGCTGAACCACACCTTAACC +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLRDIPI*LNHTLT
Trigger: GGTTAAGGTGTGGTTCAGCCATATAGGAATATCTCG...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp GCAAAAACTGGCATCTTGGACATCCTAGTATTACACTaGCAAGCAATTAGAACACAAGGAGGGCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AKTGILDILVLH*QAIRTQGGPRK
Trigger: TTTCCTTGGCCCTCCTTGTGTTCTAATTGCTTGCAAGTGTAATACTAGGATGTCCAAGATGCCAGTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAACGAATGATAGATATTaGGCCCCTTTAGGAAATGTT +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPTNDRY*APLGNV
Trigger: AACATTTCCTAAAGGGGCTCAATATCTATCATTCGT...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCATCAAAGATTGTCGCTTaGAGTTCAACTGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQASKIVA*SSTVKV
Trigger: CACTTTAACAGTTGAACTTCAAGCGACAATCTTTGA...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATAGCATGAAGAAATTGTaGTTCTTAACTCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENSMKKL*FLTLLG
Trigger: ACCCAGAAGAGTTAAGAATCACAATTTCTTCATGCT...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATTTACTCTGGGCTTCTaGACAGTTTTCACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTFTLGF*TVFTQR
Trigger: CCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGTAAA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAACTCCTAATTGTAGCTaGTTTACACTGGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTTPNCS*FTLGAI
Trigger: AATGGCACCCAGTGTAAAGCAGCTACAATTAGGAGT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAATGAGATCTGAGGCATaGAGACATGGAGACAGTATA +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTMRSEA*RHGDSI
Trigger: TATACTGTCTCCATGTCTCCATGCCTCAGATCTCAT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp AAATCCTTGTTGTATTGGGCACAAGATAGACTGAAATaGACTGTAGTCCTCACGGTGAGTCTAATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSLLYWAQDRLK*TVVLTVSLIAA
Trigger: TGCTGCAATTAGACTCACCGTGAGGACTACAGTCAATTTCAGTCTATCTTGTGCCCAATACAACAAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATTTCAGATGGATTTGCTaGTTGATGAGGTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADFRWIC*LMRSEL
Trigger: TAATTCAGACCTCATCAATCAGCAAATCCATCTGAA...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTCTCTCAAAAAGATGTTaGCTTTCTTCAGAGAGCATT +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLLSKRC*LSSESI
Trigger: AATGCTCTCTGAAGAAAGGCAACATCTTTTTGAGAG...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAATTCATAGTTATCTCTTaGACACGAAGTAGAGTACCA +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKFIVIS*TRSRVP
Trigger: TGGTACTCTACTTCGTGTGCAAGAGATAACTATGAA...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGTCTGTTACAATGCCTaGCTTAAATATATATCATGG +
Preference number: 4 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPVCYNA*LKYISW
Trigger: CCATGATATATATTTAAGGCAGGCATTGTAACAGAC...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAAGTTTCTTGCTCATCTaGCAAAGAACTTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTSFLLI*QRTFSS
Trigger: TGAGCTGAAAGTTCTTTGGCAGATGAGCAAGAAACT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR GCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATAAGTCGGTCACAAAATaGTTGATGTATCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADKSVTK*LMYQEK
Trigger: CTTCTCTTGATACATCAAGCATTTTGTGACCGACTT...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTCATAGAATTGTTCTCTaGCTATATCCCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLHRIVL*LYPILG
Trigger: TCCTAGAATGGGATATAGCCAGAGAACAATTCTATG...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTCCAATAGCATATGTTaGATGAAACCACAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPSNSIC*MKPQFQ
Trigger: TTGAAACTGTGGTTTCATCCAACATATGCTATTGGA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR TCA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAATAGCATATGTTGGATaGAACCACAGTTTCAACACA +
Preference number: 4 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTIAYVG*NHSFNT
Trigger: TGTGTTGAAACTGTGGTTTCATCCAACATATGCTAT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATACCACCTATATTTGGTaGTATCAGACATCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADTTYIW*YQTSKD
Trigger: ATCTTTTGATGTCTGATACCACCAAATATAGGTGGT...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATATTTTTACGCTTCTGTaGGATCTTAAATATTCCCTC +
Preference number: 4 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADIFTLL*DLKYSL
Trigger: GAGGGAATATTTAAGATCCCACAGAAGCGTAAAAAT...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CCA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAATCACCTAATGTATCATaGCCATTTTTCCATACACAA +
Preference number: 4 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKSPNVS*PFFHTQ
Trigger: TTGTGTATGGAAAAATGGCCATGATACATTAGGTGA...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
3UTR CAA 72 bp AAGTTTAGCTTTGAATCACTTCCAAATCTACTGATTTaGAGGTTCCGCAGTAGTTCTAACAAAACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KFSFESLPNLLI*RFRSSSNKTFQ
Trigger: CTGAAAAGTTTTGTTAGAACTACTGCGGAACCTCAAAATCAGTAGATTTGGAAGTGATTCAAAGCTAAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 90 bp CGACTCCTCGTCGAATCGCAAACGCATAGGCCGCCGCCCGAGTTCTaGGTACGAGAAGAAAGACGCGGCGCGAGCGCCAACGGCCACCGG +
Preference number: 5 (lower is better)
Translates to: RLLVESQTHRPPPEF*VREERRGASANGHR
Trigger: CCGGTGGCCGTTGGCGCTCGCGCCGCGTCTTTCTTCTCGTACGCAGAACTCGGGCGGCGGCCTATGCGTTTGCGATTCGACGAGGAGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTCCCCCAACTGGGTCCTaGCAGGCCCCGAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLPPTGS*QAPKGG
Trigger: GCCACCCTTCGGGGCCTGCAAGGACCCAGTTGGGGG...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTGGGTCACAGCCCCCTaGGAAAACTTGCTAGCGATG +
Preference number: 5 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLWVTAP*ENLLAM
Trigger: CATCGCTAGCAAGTTTTCCAAGGGGGCTGTGACCCA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTTAGGGCTGTACCACTaGGTGAGCACCACTCCACAA +
Preference number: 5 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTLGLYH*VSTTPQ
Trigger: TTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS TCA 90 bp AAACACAGGACTCTAAGTGGGTCTGCTGTCAGCACATCGGCAGCCTaGTGGCTGTTAATTCTTGATGAGCCTGGCTTAGGCAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: KHRTLSGSAVSTSAA*WLLILDEPGLGKDK
Trigger: TTTGTCTTTGCCTAAGCCAGGCTCATCAAGAATTAACAGCCATCAGGCTGCCGATGTGCTGACAGCAGACCCACTTAGAGTCCTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS-3UTR CAA 90 bp GGAGAGAAATGGACGCGGCTTTCGAACTGCTGTATTCCTTCCAGACCCGATAGACACTGTGCCTTTGATTaGATCCCAATGGGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: GEKWTRLSNCCIPSRPDRHCAFD*IPMGQN
Trigger: ATTCTGACCCATTGGGATCAAATCAAAGGCACAGTG...TCTATCGGGTCTGGAAGGAATACAGCAGTTCGAAAGCCGCGTCCATTTCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCAGACCTAGGCCTTGTTaGACGAGATGTAGAGTCGAG +
Preference number: 5 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTRPRPC*TRCRVE
Trigger: CTCGACTCTACATCTCGTCAAACAAGGCCTAGGTCT...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS TCA 90 bp GGATTCTGGTCCAGATGTAGCTATCACGTGATCACACATCCTATGTaGCTAGGGGCACCAGATCAGGAAGCTGGAAAATTTCCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: GFWSRCSYHVITHPM*LGAPDQEAGKFPEV
Trigger: AACCTCAGGAAATTTTCCAGCTTCCTGATCTGGTGCCCCTAGTCACATAGGATGTGTGATCACGTGATAGCTACATCTGGACCAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS-3UTR CAA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCTTCAGGTCAAACATATaGCTGTCTGGGGCAGTGGTT +
Preference number: 5 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSFRSNI*LSGAVV
Trigger: AACCACTGCCCCAGACAGCAATATGTTTGACCTGAA...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTAGAGCATCTGGTGTaGCTTAAGGGAGTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENVEHLV*LKGVCQ
Trigger: CTGACAGACTCCCTTAAGCAACACCAGATGCTCTAC...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp TCATTTGAGATTGTGGGGTGTGGTCCAATGCTGCTCTCAAAAAGATGTTGCCTTCCACAAAGCTCAAGGTaGGGTCAGACTGTCCAAACC +
Preference number: 5 (lower is better)
Translates to: SFEIVGCGPMLLSKRCCLPQSSR*GQTVQT
Trigger: GGTTTGGACAGTCTGACCCAACCTTGAGCTTTGTGG...AAGGCAACATCTTTTTGAGAGCAGCATTGGACCACACCCCACAATCTCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGCCAAGCAGGGGACTGTaGTTAACCCCGAATATCCAT +
Preference number: 5 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLPSRGL*LTPNIH
Trigger: ATGGATATTCGGGGTTAACAACAGTCCCCTGCTTGG...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACTCTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTTGTGTTTGTGTTCACTaGCTTAGGGCTGTACCACTT +
Preference number: 5 (lower is better)
Translates to: TLGFCTVFTQRASWPQSLCVCVH*LRAVPL
Trigger: AAGTGGTACAGCCCTAAGCAAGTGAACACAAACACA...AAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCATCAACCCCACACACATaGATAGGCAGAGGAGGAAAC +
Preference number: 5 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPSTPHT*IGRGGN
Trigger: GTTTCCTCCTCTGCCTATCAATGTGTGTGGGGTTGA...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 90 bp CTTCACTACTTCATCCAGAGCAGCTTCACTTTTACTCTGGGCTTCTaGACAGTTTTCACTCAAAGGGCTTCATGGCCACAAAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: LHYFIQSSFTFTLGF*TVFTQRASWPQSLD
Trigger: ATCAAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAGAGTAAAAGTGAAGCTGCTCTGGATGAAGTAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569384.2
CDS CCA 90 bp GATTTTGAAGATGCTGTTTATTCTGGGGTGTCCAGGGCAATCTGCTaGCAATCAGGAAGCACTGGTTATACTGCTCTAGAGCAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: DFEDAVYSGVSRAIC*QSGSTGYTALEQFL
Trigger: CAGAAACTGCTCTAGAGCAGTATAACCAGTGCTTCCTGATTGCCAGCAGATTGCCCTGGACACCCCAGAATAAACAGCATCTTCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTGCTTGCTCAGTCGTaGTCTCTTTTCTCACAGCAA +
Preference number: 5 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENVLAQS*SLFSQQ
Trigger: TTGCTGTGAGAAAAGAGACAACGACTGAGCAAGCAC...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCAAGTCTCTCCATATTTaGGCTCTGCTTTCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPKSLHI*ALLSPA
Trigger: TGCAGGGGAAAGCAGAGCCAAAATATGGAGAGACTT...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 90 bp TGTGGGCAAAGATGCACTAAACAAGGACCCTGCTTTCAAGGAGTCTaGTATCATAATTCACTTTGGATGGAGCATCCTCAGTTTGCACTG +
Preference number: 5 (lower is better)
Translates to: CGQRCTKQGPCFQGV*YHNSLWMEHPQFAL
Trigger: CAGTGCAAACTGAGGATGCTCCATCCAAAGTGAATTATGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521091.6
ENST00000643077.1
CDS-3UTR CAA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTTGGACATCTCATGTTTaGCCACAGAATTTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGWTSHV*PQNFKL
Trigger: AAGCTTGAAATTCTGTGGCAAAACATGAGATGTCCA...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACTTTGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGGACAGAAACTCAGGTATGAATTTCAATCATTaGAGATTGTGGGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: TLDGASSVCTEGLDRNSGMNFNH*RLWGVV
Trigger: GACCACACCCCACAATCTCAAATGATTGAAATTCAT...ACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCAGGGGTGTTCAAAGATaGTCGCTTGAAGTTCAACTG +
Preference number: 5 (lower is better)
Translates to: RESVSVGCIELFSGYIPFRGVQR*SLEVQL
Trigger: CAGTTGAACTTCAAGCGACAATCTTTGAACACCCCT...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATACCAGATTTTATTTGTaGAGGGCGAGCAGTCTACAG +
Preference number: 5 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENTRFYL*RASSLQ
Trigger: CTGTAGACTGCTCGCCCTCAACAAATAAAATCTGGT...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGAAGGCCTCAGATTGGTaGAATGGTGCTGTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLKASDW*NGAVQR
Trigger: TCTTTGAACAGCACCATTCAACCAATCTGAGGCCTT...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTCAGCTTTCAGTTTCTaGCTCATCTGCCAAAGAACT +
Preference number: 5 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTSAFSF*LICQRT
Trigger: AGTTCTTTGGCAGATGAGCAAGAAACTGAAAGCTGA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCACAAGATAGACTGAAATaGACTGTAGTCCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPQDRLK*TVVLTV
Trigger: CACCGTGAGGACTACAGTCAATTTCAGTCTATCTTG...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATTTCCAGGTCCAGGTCTaGAAAATCTGGAAATCTGGA +
Preference number: 5 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADFQVQV*KIWKSG
Trigger: TCCAGATTTCCAGATTTTCAAGACCTGGACCTGGAA...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGCTCTCAAAAAGATGTaGCCTTTCTTCAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPALKKM*PFFREH
Trigger: ATGCTCTCTGAAGAAAGGCAACATCTTTTTGAGAGC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCGAGGTACAGAAAAGATaGGAATGCCATTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: RESVSVGCIELFSGYIPFEVQKR*ECHSGQ
Trigger: TTGACCTGAATGGCATTCCAATCTTTTCTGTACCTC...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCGACATGCCTGTCTTCTaGCACTTTTCTAAGTTCACA +
Preference number: 5 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPDMPVF*HFSKFT
Trigger: TGTGAACTTAGAAAAGTGCAAGAAGACAGGCATGTC...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTATAACTGCTACTGGTaGAGTCATACAGTGATGTGT +
Preference number: 5 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTYNCYW*SHTVMC
Trigger: ACACATCACTGTATGACTCAACCAGTAGCAGTTATA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGAATGCCATTCAGGTCAAACATATTGCTGTCTGGGGCAGTGGTTTTCAAACTGCCCTACCACCTATATTaGGTGGTATCAGACATCAAA +
Preference number: 5 (lower is better)
Translates to: GMPFRSNILLSGAVVFKLPYHLY*VVSDIK
Trigger: TTTGATGTCTGATACCACCAAATATAGGTGGTAGGG...CAGTTTGAAAACCACTGCCCCAGACAGCAATATGTTTGACCTGAATGGCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTCAACCAGATTTTATTaGTTGAGGGCGAGCAGTCTA +
Preference number: 5 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPSTRFY*LRASSL
Trigger: TAGACTGCTCGCCCTCAACAAATAAAATCTGGTTGA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACAAGTCAAGGCCTCAGATaGGTTGAATGGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTSQGLR*VEWCCS
Trigger: TGAACAGCACCATTCAACCAATCTGAGGCCTTGACT...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGTCGTGGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCATTGGCCCTACTTTCTTaGGTAATCAAGTCGTCATCT +
Preference number: 5 (lower is better)
Translates to: GRGIWSMRVRKVQAPVQALALLS*VIKSSS
Trigger: AGATGACGACTTGATTACCAAAGAAAGTAGGGCCAA...TGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCCACGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp AATGGTTGTGAAGGGTCCCAAATGACATCTAGGCCTCAGTTTCCTCTCTGTAGCTGGGTGAGGTGTGGGTaGTTACTATTAAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: NGCEGSQMTSRPQFPLCSWVRCG*LLLKIL
Trigger: AAGGATTTTTAATAGTAACAACCCACACCTCACCCA...GCTACAGAGAGGAAACTGAGGCCTAGATGTCATTTGGGACCCTTCACAACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp TTCACTTGCTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATTCTCTGCTTAAGAAGTaGAATGGTAACAGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FTCLGLYHLVSTTPQNENSLLKK*NGNSWH
Trigger: ATGCCAGCTGTTACCATTCAACTTCTTAAGCAGAGA...ATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAGCAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATTACACTGGGTGCCATaGTACCATATGCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTLHWVP*YHMHQP
Trigger: TGGCTGATGCATATGGTACAATGGCACCCAGTGTAA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCACCAAATCTACTGATTTaGAGGTTCCGCAGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPPNLLI*RFRSSS
Trigger: AGAACTACTGCGGAACCTCAAAATCAGTAGATTTGG...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 90 bp CCTAATAAATGCATCTTGATATGTTGTGGTGTATGTGGGCAAAGATaGACTAAACAAGGACCCTGCTTTCAAGGAGTCTGCTATCAGACC +
Preference number: 5 (lower is better)
Translates to: PNKCILICCGVCGQR*TKQGPCFQGVCYQT
Trigger: GGTCTGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATATCAAGATGCATTTATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602971.2
ENST00000646496.1
CDS-3UTR CAA 90 bp ACAAACGCTGTCATCAGGATTCAAGTCTCTCCATATTTTGGCTCTGCTTTCCCCTATCTGCTCCAACTATaGCAGAACACTGTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: TNAVIRIQVSPYFGSAFPYLLQL*QNTVVK
Trigger: TTTCACTACAGTGTTCTGCAATAGTTGGAGCAGATA...GGGGAAAGCAGAGCCAAAATATGGAGAGACTTGAATCCTGATGACAGCGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAAAGCTTCAAAACCCGCTaGCTGATAATTCAGGTATTC +
Preference number: 5 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKSFKTR*LIIQVF
Trigger: GAATACCTGAATTATCAGCAAGCGGGTTTTGAAGCT...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp ATGGGTGTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCATGTAAAATGACAGTATaGAGACTGATGTGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: MGVFVSSKVVGIISGKNPCKMTV*RLMWFH
Trigger: GTGGAACCACATCAGTCTCAATACTGTCATTTTACA...TGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGACACCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAACACATCAAAGTCTCCTaGTTCAACATGATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKHIKVS*FNMIWS
Trigger: AGACCAGATCATGTTGAACAAGGAGACTTTGATGTG...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCCTTAAGTCATTCCTTTaGACTGAGTATGGCAGGATT +
Preference number: 5 (lower is better)
Translates to: RESVSVGCIELFSGYIPFLKSFL*TEYGRI
Trigger: AATCCTGCCATACTCAGTCAAAAGGAATGACTTAAG...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAACCAGATTTGTCAAAGTaGGCCCTACTTTCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKPDLSK*ALLSLV
Trigger: TACCAAAGAAAGTAGGGCCAACTTTGACAAATCTGG...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAATATCCTCAATCAGACTaGAGGTTCTGTTTAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKYPQSD*RFCLGV
Trigger: GACTCCTAAACAGAACCTCAAGTCTGATTGAGGATA...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTAGGGCTGTACCACTTGGTGAGCACCACTCCACAAAACGAAAATGTTTGAAATCTTCTTTTGCTAGGTaGAACTGGTACAGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LRAVPLGEHHSTKRKCLKSSFAR*NWYSSV
Trigger: CACAGAACTGTACCAGTTCAACCTAGCAAAAGAAGA...TTTCAAACATTTTCGTTTTGTGGAGTGGTGCTCACCAAGTGGTACAGCCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GGAATATGGTCAATGAGAGTCAGAAAAGTACAGGCACCAGTACAAGCAGCAGATGCAAAAACTGGCATCTaGGACATCCTAGTATTACAC +
Preference number: 5 (lower is better)
Translates to: GIWSMRVRKVQAPVQAADAKTGI*DILVLH
Trigger: GTGTAATACTAGGATGTCCAAGATGCCAGTTTTTGC...ATCTGCTGCTTGTACTGGTGCCTGTACTTTTCTGACTCTCATTGACCATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp GTCTTCGTCAGTAGTAAGGTGGTAGGAATCATCTCGGGCAAAAATCCAGGTACCTGTCAAGTCTCAATGTaGGTAGATATATTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: VFVSSKVVGIISGKNPGTCQVSM*VDILVW
Trigger: CCACACTAATATATCTACCAACATTGAGACTTGACA...GGTACCTGGATTTTTGCCCGAGATGATTCCTACCACCTTACTACTGACGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 90 bp ATATGTTGTGGTGTATGTGGGCAAAGATGCACTAAACAAGGACCCTaGTTTCAAGGAGTCTGCTATCATAATTCACTTTGGATGGAGCAT +
Preference number: 5 (lower is better)
Translates to: ICCGVCGQRCTKQGP*FQGVCYHNSLWMEH
Trigger: ATGCTCCATCCAAAGTGAATTATGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521091.6
ENST00000643077.1
CDS GCA 90 bp CCTAATAAATGCATCTTGATATGTTGTGGTGTATGTGGGCAAAGATaGACTAAACAAGGACCCTGCTTTCAAGGAGTCTGCTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: PNKCILICCGVCGQR*TKQGPCFQGVCYLQ
Trigger: TTGCAGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATATCAAGATGCATTTATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563812.2
ENST00000644027.1
CDS-3UTR CAA 90 bp AGGGAGTCTGTCAGTGTAGGGTGCATAGAATTGTTCTCTGGCTATATCCCATTCACAGTGATGTGTAGTTaGGAAAAGAAGACGAATGAT +
Preference number: 5 (lower is better)
Translates to: RESVSVGCIELFSGYIPFTVMCS*EKKTND
Trigger: ATCATTCGTCTTCTTTTCCAAACTACACATCACTGT...GAATGGGATATAGCCAGAGAACAATTCTATGCACCCTACACTGACAGACTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS-3UTR CAA 90 bp CTTTACGTACACCCACGCTTTATAGTTTACAAAGCGATTTCAACCCCACACACATCGGTCACAAAATGCTaGATGTATCAAGAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LYVHPRFIVYKAISTPHTSVTKC*MYQEKP
Trigger: AGGCTTCTCTTGATACATCAAGCATTTTGTGACCGA...TGTGTGTGGGGTTGAAATCGCTTTGTAAACTATAAAGCGTGGGTGTACGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS TCA 90 bp CCACATTACAGGTTGATGGAGTTAGAACTCATCTGCTATAAATTTTaGTTGCCTGCAGTTGGGCTTGTAAGTATCTATCAGAGAACAAGG +
Preference number: 5 (lower is better)
Translates to: PHYRLMELELICYKF*LPAVGLVSIYQRTR
Trigger: CCTTGTTCTCTGATAGATACTTACAAGCCCAACTGCAGGCAATCAAAATTTATAGCAGATGAGTTCTAACTCCATCAACCTGTAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS GCA 90 bp CCTAATAAATGCATCTTGATATGTTGTGGTGTATGTGGGCAAAGATaGACTAAACAAGGACCCTGCTTTCAAGGAGTCTGCTATCATAAT +
Preference number: 5 (lower is better)
Translates to: PNKCILICCGVCGQR*TKQGPCFQGVCYHN
Trigger: ATTATGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATATCAAGATGCATTTATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521091.6
ENST00000643077.1
CDS GCA 90 bp AAAGATGCACTAAACAAGGACCCTGCTTTCAAGGAGTCTGCTATCTaGAAAGACAGTAAATGCAGGCAAGTAACTATTTTACAGGATTTT +
Preference number: 5 (lower is better)
Translates to: KDALNKDPAFKESAI*KDSKCRQVTILQDF
Trigger: AAAATCCTGTAAAATAGTTACTTGCCTGCATTTACTGTCTTTGCAGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563812.2
ENST00000644027.1
CDS CCA 90 bp AAGGTCTTGGTCCTTCTGTATGTAATACCCCATCATTCAACATATTaGTTTCTCCTTATGTCTGAGGGCTCCCTAGATCAAAATTTAGAA +
Preference number: 5 (lower is better)
Translates to: KVLVLLYVIPHHSTY*FLLMSEGSLDQNLE
Trigger: TTCTAAATTTTGATCTAGGGAGCCCTCAGACATAAGGAGAAACCAATATGTTGAATGATGGGGTATTACATACAGAAGGACCAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS TCA 90 bp CATCCAATTCTTTGTAAGTATTACTCCAAGAAGTCCATGGCTGGATaGCTTCTCAAGCATTATCTCAAGGAGATAAATCTCAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: HPILCKYYSKKSMAG*LLKHYLKEINLKKI
Trigger: TATTTTCTTGAGATTTATCTCCTTGAGATAATGCTTGAGAAGTCATCCAGCCATGGACTTCTTGGAGTAATACTTACAAAGAATTGGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS TCA 72 bp GGGAGGGCGCGCCAGGGCTTCTTCGATTTAGGGGCCTaGCTCCCCGGCGACGAGACAAGATGGCTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: GRARQGFFDLGA*LPGDETRWLLR
Trigger: CCGGAGGAGCCATCTTGTCTCGTCGCCGGGGAGTCAGGCCCCTAAATCGAAGAAGCCCTGGCGCGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000569384.2
ENST00000602971.2
ENST00000643920.1
ENST00000644773.2
ENST00000646021.1
ENST00000646496.1
CDS GCA 72 bp GTCGAATCGCAAACGCATAGGCCGCCGCCCGAGTTCTaGGTACGAGAAGAAAGACGCGGCGCGAGCGCCAAC +
Preference number: 6 (lower is better)
Translates to: VESQTHRPPPEF*VREERRGASAN
Trigger: GTTGGCGCTCGCGCCGCGTCTTTCTTCTCGTACGCAGAACTCGGGCGGCGGCCTATGCGTTTGCGATTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644773.2
CDS GCA 72 bp GGTGTATGTGGGCAAAGATGCACTAAACAAGGACCCTaGTTTCAAGGAGTCTGCTATCAGACCCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: GVCGQRCTKQGP*FQGVCYQTREG
Trigger: CCCCTCCCGGGTCTGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602971.2
ENST00000646496.1
CDS CAA 72 bp ATCTCGGGCAAAAATCCAGGTACCAGGTCTGTAGGTTaGGATGGAGCATCCTCAGTTTGCACTGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: ISGKNPGTRSVG*DGASSVCTEGL
Trigger: CAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAACCTACAGACCTGGTACCTGGATTTTTGCCCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643553.1
CDS GCA 72 bp ACCAGGTCTGTAGGTTTGGATGGAGCATCCTCAGTTTaGACTGAGGGTCTGGACAGAAACTCAGGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: TRSVGLDGASSV*TEGLDRNSGLL
Trigger: TAGAAGACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAACCTACAGACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643553.1
CDS CCA 72 bp GATGCTGTTTATTCTGGGGTGTCCAGGGCAATCTGCTaGCAATCAGGAAGCACTGGTTATACTGCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: DAVYSGVSRAIC*QSGSTGYTALE
Trigger: CTCTAGAGCAGTATAACCAGTGCTTCCTGATTGCCAGCAGATTGCCCTGGACACCCCAGAATAAACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS TCA 72 bp GTCTGTAGGTTTGGATGGAGCATCCTCAGTTTGCACTaGGGGTCTGGACAGAAACTCAGGTCTTCTAATTCC +
Preference number: 6 (lower is better)
Translates to: VCRFGWSILSLH*GSGQKLRSSNS
Trigger: GGAATTAGAAGACCTGAGTTTCTGTCCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAACCTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643553.1
CDS GCA 72 bp GAAGATGCTGTTTATTCTGGGGTGTCCAGGGCAATCTaGTGGCAATCAGGAAGCACTGGTTATACTGCTCTA +
Preference number: 6 (lower is better)
Translates to: EDAVYSGVSRAI*WQSGSTGYTAL
Trigger: TAGAGCAGTATAACCAGTGCTTCCTGATTGCCAGCAGATTGCCCTGGACACCCCAGAATAAACAGCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS GCA 72 bp TGCATGGAATTACAAACACAGGACTCTAAGTGGGTCTaGTGTCAGCACATCGGCAGCCTGATGGCTGTTAAT +
Preference number: 6 (lower is better)
Translates to: CMELQTQDSKWV*CQHIGSLMAVN
Trigger: ATTAACAGCCATCAGGCTGCCGATGTGCTGACAGCAGACCCACTTAGAGTCCTGTGTTTGTAATTCCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS CCA 72 bp CCCTGCTTTCAAGGAGTCTGCTATCATAATTCACTTTaGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PCFQGVCYHNSL*MEHPQFALRVW
Trigger: CCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGTGAATTATGATAGCAGACTCCTTGAAAGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521091.6
ENST00000643077.1
CDS CCA 72 bp AACAAATGCATGGAATTACAAACACAGGACTCTAAGTaGGTCTGCTGTCAGCACATCGGCAGCCTGATGGCT +
Preference number: 6 (lower is better)
Translates to: NKCMELQTQDSK*VCCQHIGSLMA
Trigger: AGCCATCAGGCTGCCGATGTGCTGACAGCAGACCCACTTAGAGTCCTGTGTTTGTAATTCCATGCATTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS CCA 72 bp AAATCCAGGTACCAGGTCTGTAGGCATAATTCACTTTaGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: KSRYQVCRHNSL*MEHPQFALRVW
Trigger: CCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGTGAATTATGCCTACAGACCTGGTACCTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643071.1
ENST00000643280.1
ENST00000643877.1
CDS CAA 72 bp CACCACGGAGATATTATGCCCTTAAACCGTGGGATATaGCCATGGGATTCTGGTCCAGATGTAGCTATCACG +
Preference number: 6 (lower is better)
Translates to: HHGDIMPLNRGI*PWDSGPDVAIT
Trigger: CGTGATAGCTACATCTGGACCAGAATCCCATGGCAATATCCCACGGTTTAAGGGCATAATATCTCCGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS CCA 72 bp CTGGGCTTCTGCACAGTTTTCACTCAAAGGGCTTCATaGCCACAAAGCCTTGATGTATCAAGAGAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LGFCTVFTQRAS*PQSLDVSREAF
Trigger: AAAGGCTTCTCTTGATACATCAAGGCTTTGTGGCCATGAAGCCCTTTGAGTGAAAACTGTGCAGAAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569384.2
CDS CCA 72 bp TCCCAATACCCAGCCATTTTAACACTGTGGGTAAAATaGAGGCTAATTCCAAGGAGAGTACTGGACTGGGTG +
Preference number: 6 (lower is better)
Translates to: SQYPAILTLWVK*RLIPRRVLDWV
Trigger: CACCCAGTCCAGTACTCTCCTTGGAATTAGCCTCCATTTTACCCACAGTGTTAAAATGGCTGGGTATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS CCA 72 bp TATGCCCTTAAACCGTGGGATATTGCCATGGGATTCTaGTCCAGATGTAGCTATCACGTGATCACACATCCT +
Preference number: 6 (lower is better)
Translates to: YALKPWDIAMGF*SRCSYHVITHP
Trigger: AGGATGTGTGATCACGTGATAGCTACATCTGGACCAGAATCCCATGGCAATATCCCACGGTTTAAGGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS CCA 72 bp AATCTACCACCACGGAGATATTATGCCCTTAAACCGTaGGATATTGCCATGGGATTCTGGTCCAGATGTAGC +
Preference number: 6 (lower is better)
Translates to: NLPPRRYYALKP*DIAMGFWSRCS
Trigger: GCTACATCTGGACCAGAATCCCATGGCAATATCCCACGGTTTAAGGGCATAATATCTCCGTGGTGGTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS TCA 72 bp TCCAGATGTAGCTATCACGTGATCACACATCCTATGTaGCTAGGGGCACCAGATCAGGAAGCTGGAAAATTT +
Preference number: 6 (lower is better)
Translates to: SRCSYHVITHPM*LGAPDQEAGKF
Trigger: AAATTTTCCAGCTTCCTGATCTGGTGCCCCTAGTCACATAGGATGTGTGATCACGTGATAGCTACATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS GCA 72 bp TGCATCTTGATATGTTGTGGTGTATGTGGGCAAAGATaGACTAAACAAGGACCCTGCTTTCAAGGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: CILICCGVCGQR*TKQGPCFQGVC
Trigger: GCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATATCAAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521091.6
ENST00000563812.2
ENST00000602971.2
ENST00000643077.1
ENST00000644027.1
ENST00000646496.1
CDS CCA 72 bp GGCATTTTGGAAAATGGCAAGTACCATAATTCACTTTaGATGGAGCATCCTCAGTTTGCACTGAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GILENGKYHNSL*MEHPQFALRVW
Trigger: CCAGACCCTCAGTGCAAACTGAGGATGCTCCATCCAAAGTGAATTATGGTACTTGCCATTTTCCAAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563812.2
ENST00000644027.1
CDS GCA 72 bp GGTGTATGTGGGCAAAGATGCACTAAACAAGGACCCTaGTTTCAAGGAGTCTGCTATCATAATTCACTTTGG +
Preference number: 6 (lower is better)
Translates to: GVCGQRCTKQGP*FQGVCYHNSLW
Trigger: CCAAAGTGAATTATGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAGTGCATCTTTGCCCACATACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521091.6
ENST00000643077.1
CDS CAA 90 bp TTCATATTGGGTAGCTTTGCTGTTAGAACATGTCCCGTTTTTGACTaGACAATCTACCACCACGGAGATATTATGCCCTTAAACCGTGGG +
Preference number: 6 (lower is better)
Translates to: FILGSFAVRTCPVFD*TIYHHGDIMPLNRG
Trigger: CCCACGGTTTAAGGGCATAATATCTCCGTGGTGGTAGATTGTCAAGTCAAAAACGGGACATGTTCTAACAGCAAAGCTACCCAATATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS CCA 72 bp GTCCTTCTGTATGTAATACCCCATCATTCAACATATTaGTTTCTCCTTATGTCTGAGGGCTCCCTAGATCAA +
Preference number: 6 (lower is better)
Translates to: VLLYVIPHHSTY*FLLMSEGSLDQ
Trigger: TTGATCTAGGGAGCCCTCAGACATAAGGAGAAACCAATATGTTGAATGATGGGGTATTACATACAGAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS CAA 90 bp TCTGATAGCCTGCTCTCTAAACTCCTCCTTCCTAATAAATGCATCTaGATATGTTGTGGTGTATGTGGGCAAAGATGCACTAAACAAGGA +
Preference number: 6 (lower is better)
Translates to: SDSLLSKLLLPNKCI*ICCGVCGQRCTKQG
Trigger: TCCTTGTTTAGTGCATCTTTGCCCACATACACCACAACATATCAAGATGCATTTATTAGGAAGGAGGAGTTTAGAGAGCAGGCTATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521091.6
ENST00000563812.2
ENST00000602971.2
ENST00000643077.1
ENST00000644027.1
ENST00000646496.1
CDS TCA 72 bp AATAAGTCGGTCACAAAATGCATAGAGGTTCTACCTTaGTGTATCAAGAGAAGCCTTTTCTGGAATCTGGTG +
Preference number: 6 (lower is better)
Translates to: NKSVTKCIEVLP*CIKRSLFWNLV
Trigger: CACCAGATTCCAGAAAAGGCTTCTCTTGATACATCAAGGTAGAACCTCTATGCATTTTGTGACCGACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519077.4
ENST00000521091.6
ENST00000602393.1
ENST00000602971.2
ENST00000643071.1
ENST00000643553.1
ENST00000643920.1
ENST00000647354.1
CDS GCA 72 bp CTAAACAAGGACCCTGCTTTCAAGGAGTCTGCTATCTaGAAAGACAGTAAATGCAGGCAAGTAACTATTTTA +
Preference number: 6 (lower is better)
Translates to: LNKDPAFKESAI*KDSKCRQVTIL
Trigger: TAAAATAGTTACTTGCCTGCATTTACTGTCTTTGCAGATAGCAGACTCCTTGAAAGCAGGGTCCTTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563812.2
ENST00000644027.1
CDS CCA 72 bp CTGAGATCCTTTAATACACTATACCTCAATGTAGACTaGGGGAAGGGCCATGTCTTACATACTTTACTATCT +
Preference number: 6 (lower is better)
Translates to: LRSFNTLYLNVD*GKGHVLHTLLS
Trigger: AGATAGTAAAGTATGTAAGACATGGCCCTTCCCCCAGTCTACATTGAGGTATAGTGTATTAAAGGATCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569149.2
CDS GCA 72 bp GCTTTCAAGGAGTCTGCTATCTGCAAAGACAGTAAATaGAGGCAAGTAACTATTTTACAGGATTTTGTATAC +
Preference number: 6 (lower is better)
Translates to: AFKESAICKDSK*RQVTILQDFVY
Trigger: GTATACAAAATCCTGTAAAATAGTTACTTGCCTGCATTTACTGTCTTTGCAGATAGCAGACTCCTTGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563812.2
ENST00000644027.1
CDS CAA 72 bp ATTATAAACAGAGGGATTTACCATAGAGGTTCTACCTaGATGTATCAAGAGAAGCCTTTTCTGGAATCTGGT +
Preference number: 6 (lower is better)
Translates to: IINRGIYHRGST*MYQEKPFLESG
Trigger: ACCAGATTCCAGAAAAGGCTTCTCTTGATACATCAAGGTAGAACCTCTATGGTAAATCCCTCTGTTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569149.2
ENST00000643877.1
CDS CAA 72 bp TTAAGTTTATATACCAACAATAAAACAAAGGAGACATaGCCCCTCTTCCTCTTCCAATGCCTTCCTCAAACT +
Preference number: 6 (lower is better)
Translates to: LSLYTNNKTKET*PLFLFQCLPQT
Trigger: AGTTTGAGGAAGGCATTGGAAGAGGAAGAGGGGCAATGTCTCCTTTGTTTTATTGTTGGTATATAAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602393.1
ENST00000644027.1
CDS TCA 72 bp CAGAGACATACTAATTCAACCATTAATAAGAAGGTATaGGAAAGGGGGATTTTGAAGATGCTGTTTATTCTG +
Preference number: 6 (lower is better)
Translates to: QRHTNSTINKKV*ERGILKMLFIL
Trigger: CAGAATAAACAGCATCTTCAAAATCCCCCTTTCTCATACCTTCTTATTAATGGTTGAATTAGTATGTCTCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569149.2