RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUFT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143367

Ensembl transcript IDs: ENST00000353024.4, ENST00000368848.6, ENST00000368849.8, ENST00000392712.7, ENST00000461859.1, ENST00000490156.1, ENST00000498606.5

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCGTCTGCCCAGCTTAGAGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: GSCLQDNVFQRAAVP*IGARAPSAQLRVAR
Trigger: CCTGGCCACTCTAAGCTGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CCA 90 bp AGGGCTGAGGCAAATCTTGTCACCTCTCCCAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAGTCCAGTCTACAACAGAAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: RAEANLVTSPNLMKA*LMAQPESSLQQKGG
Trigger: GCCTCCCTTCTGTTGTAGACTGGACTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATTGGGAGAGGTGACAAGATTTGCCTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR GCA 90 bp GAAGGGCTAGTGAAGAACTCATCTGGGTCCCAGAAGAGTCCTGATTaGCCTCTTTCTCCAAACAACATATACTCTGACCCCAAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: EGLVKNSSGSQKSPD*PLSPNNIYSDPKAS
Trigger: TGAGGCTTTGGGGTCAGAGTATATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTTCTTCACTAGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR TCA 90 bp GCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGTTTaGAGGAGAAAGAGAGAAGAAACAGGCAGAGGAAAGGGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: ASGKVDSPSLAAEQV*RRKREETGRGKGEK
Trigger: TTTCTCTCCCTTTCCTCTGCCTGTTTCTTCTCTCTTTCTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR GCA 90 bp GCCACAGACAACAATATCAGAAAGGGAAGAAACATGGATATCACCTaGTCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATC +
Preference number: 1 (lower is better)
Translates to: ATDNNIRKGRNMDIT*SDPLILQMRELPEI
Trigger: GATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGAGCAGGTGATATCCATGTTTCTTCCCTTTCTGATATTGTTGTCTGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CCA 90 bp AGTAGAAAAACAAACAGTTTGTTGCTAAGAACTGAGCTGTGTTTGTaGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGA +
Preference number: 1 (lower is better)
Translates to: SRKTNSLLLRTELCL*KELHSPRTFSNHSG
Trigger: TCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTTTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CAA 90 bp ATAGGTGCTCGTGCTCCGTCTGCCCAGCTTAGAGTGGCCAGGGGCTaGGGAATGGTGAGACACAGGAGCCCGAAGTCCTGGGTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: IGARAPSAQLRVARG*GMVRHRSPKSWVQP
Trigger: TGGCTGCACCCAGGACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCCTGGCCACTCTAAGCTGGGCAGACGGAGCACGAGCACCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CAA 90 bp AAGGCCACCCAGTCAAAGCTTAGGTTCACTGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: KATQSKLRFTGSHQA*PGNPTICLQEARAA
Trigger: CGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCCAGTGAACCTAAGCTTTGACTGGGTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 2 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACAGGAGCCCGAAGTCCTaGGTGCAGCCAGGGGACAGT +
Preference number: 2 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHRSPKS*VQPGDS
Trigger: ACTGTCCCCTGGCTGCACCCAGGACTTCGGGCTCCT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGGGCTTGGGAATGGTaGGACACAGGAGCCCGAAGT +
Preference number: 2 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGAWEW*DTGARS
Trigger: ACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAGGAGCCCGAAGTCCTaGGTGCAGCCAGGGGACAGT +
Preference number: 2 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITRSPKS*VQPGDS
Trigger: ACTGTCCCCTGGCTGCACCCAGGACTTCGGGCTCCT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTGGGGCTTGGGAATGGTaGGACACAGGAGCCCGAAGT +
Preference number: 2 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCGAWEW*DTGARS
Trigger: ACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCC...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTASQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: KDQLWSKGFRRASEELIWSQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGGGGCTTGGGAATGGTaGGACACAGGAGCCCGAAGT +
Preference number: 2 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHGAWEW*DTGARS
Trigger: ACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHRAAVP*IGARAP
Trigger: CGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCRAAVP*IGARAP
Trigger: CGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 2 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGTCCCAGAAGAGTCCTaGTTGCCCTCTTTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQVPEES*LPSFSK
Trigger: TTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGAC...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAGTGCCTTGAATAGGTaGTCGTGCTCCGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITSALNR*SCSVCP
Trigger: TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAACTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQLTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTGTCTTCCAAAGGGCTaGAGTGCCTTGAATAGGTGC +
Preference number: 2 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHCLPKG*SALNRC
Trigger: GCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTGCCCTGGCTCCTGCTTaGAGGACAATGTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVALAPA*RTMSSK
Trigger: TTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGC...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSSQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHTGGTQ*KQFSGS
Trigger: AGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 2 (lower is better)
Translates to: SVALENFSAKGYSLNVHSALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAATACAAAGAGGATTTTaGTGGGACTGGTGGAACCCA +
Preference number: 2 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQIQRGF*WDWWNP
Trigger: TGGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTAT...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAATTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 2 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITNLMKA*LMAQPE
Trigger: CTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHNLMKA*LMAQPE
Trigger: CTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CAA 90 bp AGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGTTaGAAGGAGAAAGAGAGAAGAAACAGGCAGAGGAAAGGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLRESRLTFLSCRAS*KEKERRNRQRKGRE
Trigger: TTCTCTCCCTTTCCTCTGCCTGTTTCTTCTCTCTTTCTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAGAGAGAAGTCACACATaGCTGTCTGTAGCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAERSHT*LSVALE
Trigger: CTCTAGGGCTACAGACAGTCATGTGTGACTTCTCTC...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTAAGAAGACTGAGGTGTaGCTGGTGGTACACCTTAGG +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCKKTEV*LVVHLR
Trigger: CCTAAGGTGTACCACCAGGCACACCTCAGTCTTCTT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCACTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTALRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATACTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 2 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNILRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTATGGTQ*KQFSGS
Trigger: AGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAATGAGGGAACTCCCTaGAATCCCAGAGCATTGTTA +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHNEGTP*NPRALL
Trigger: TAACAATGCTCTGGGATTTCAGGGAGTTCCCTCATT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTATACAAAGAGGATTTTaGTGGGACTGGTGGAACCCA +
Preference number: 2 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVIQRGF*WDWWNP
Trigger: TGGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTAT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCACTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTALTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACAAAACCATGATGACCTaGAGGGTCATTCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHKTMMT*RVIQSQ
Trigger: CTGGCTCTGAATGACCCTGCAGGTCATCATGGTTTT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAGTGCCTTGAATAGGTaGTCGTGCTCCGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: PGFKQIQILQEKAIELWYSALNR*SCSVCP
Trigger: TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTTCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 2 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAAGGAGCCCGAAGTCCTaGGTGCAGCCAGGGGACAGT +
Preference number: 2 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRRSPKS*VQPGDS
Trigger: ACTGTCCCCTGGCTGCACCCAGGACTTCGGGCTCCT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTATACAAAGAGGATTTTaGTGGGACTGGTGGAACCCA +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCIQRGF*WDWWNP
Trigger: TGGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTAT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: KDQLWSKGFRRASEELIWFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTCCCAGAGCATTGTTATaGACAAAGCCAGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCPRALL*TKPECE
Trigger: CTCACATTCTGGCTTTGTCCATAACAATGCTCTGGG...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTATTCTCCAATCACTCTaGACATCTGTGTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCILQSL*TSVSPA
Trigger: AGCTGGAGACACAGATGTCCAGAGTGATTGGAGAAT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATATTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: PGFKQIQILQEKAIELWYRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSNLMKA*LMAQPE
Trigger: CTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 2 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 2 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTTATAGTACCATACTCTaGTGCCTATCTACTTCTCAA +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCYSTIL*CLSTSQ
Trigger: TTGAGAAGTAGATAGGCATCAGAGTATGGTACTATA...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGCCATACAAAGAATATaGCACAGACAACAATATCAG +
Preference number: 2 (lower is better)
Translates to: SDPLILQMRELPEIPEHCAIQRI*HRQQYQ
Trigger: CTGATATTGTTGTCTGTGGCATATTCTTTGTATGGC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGCCCTGGCTCCTGCTTaGAGGACAATGTCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRALAPA*RTMSSK
Trigger: TTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCTCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCTTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR TCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCATTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGACTTAAGGATTCTGGCTaGGTGAGCCACATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRLKDSG*VSHIEP
Trigger: AGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAG...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGATCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR GCA 72 bp CTCACCAGGCCTTGCCAGGTAACCCCACTATCTGTCTaGAGGAGGCCAGGGCAGCGTAGGCTGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: LTRPCQVTPLSV*RRPGQRRLQME
Trigger: CTCCATCTGCAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGGCCTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR TCA 72 bp TTGCAGGACAATGTCTTCCAAAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCGTCTGCCCAGCTTAGA +
Preference number: 3 (lower is better)
Translates to: LQDNVFQRAAVP*IGARAPSAQLR
Trigger: TCTAAGCTGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACATTGTCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLKTNSL*LRTELC
Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 3 (lower is better)
Translates to: SVALENFSAKGYSLNVHSGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CCA 72 bp GCAAATCTTGTCACCTCTCCCAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAGTCCAGTCTACAACAG +
Preference number: 3 (lower is better)
Translates to: ANLVTSPNLMKA*LMAQPESSLQQ
Trigger: CTGTTGTAGACTGGACTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATTGGGAGAGGTGACAAGATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR GCA 72 bp CACTGTAGGAATATAGATATTGCCCTGGCTCCTGCTTaGAGGACAATGTCTTCCAAAGGGCTGCAGTGCCTT +
Preference number: 3 (lower is better)
Translates to: HCRNIDIALAPA*RTMSSKGLQCL
Trigger: AAGGCACTGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATATTCCTACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 3 (lower is better)
Translates to: PGFKQIQILQEKAIELWYGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 3 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACTATAATCCTAGCACTTaGGGAAGCCGAGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHYNPST*GSRGGW
Trigger: CCACCCACCTCGGCTTCCCAAAGTGCTAGGATTATA...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CCA 72 bp GCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATaGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTC +
Preference number: 3 (lower is better)
Translates to: AGSFRARIKDQL*SKGFRRASEEL
Trigger: GAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACAGAACTGAGCTGTGTTaGTGGAAGGAACTTCATTCC +
Preference number: 3 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHRTELC*WKELHS
Trigger: GGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAGAACTGAGCTGTGTTaGTGGAAGGAACTTCATTCC +
Preference number: 3 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSRTELC*WKELHS
Trigger: GGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 3 (lower is better)
Translates to: KDQLWSKGFRRASEELIWNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCATGCCCTGGCTCCTGCTaGCAGGACAATGTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSCPGSC*QDNVFQ
Trigger: TTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCA...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR TCA 72 bp TACAAAGAGGATTTTGCTGGGACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTG +
Preference number: 3 (lower is better)
Translates to: YKEDFAGTGGTQ*KQFSGSGSRRL
Trigger: CAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 3 (lower is better)
Translates to: PGFKQIQILQEKAIELWYNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAGAACTGAGCTGTGTTaGTGGAAGGAACTTCATTCC +
Preference number: 3 (lower is better)
Translates to: PGFKQIQILQEKAIELWYRTELC*WKELHS
Trigger: GGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGAACTGAGCTGTGTTaGTGGAAGGAACTTCATTCC +
Preference number: 3 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSRTELC*WKELHS
Trigger: GGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR-3UTR CAA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 3 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGCCTGGAGAGTCAGCCTaGGAATGTCCACGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLPGESA*ECPRCP
Trigger: CGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGG...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368849.8
CDS-3UTR GCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGCCTAGCAAGCGCCTCTaGAGCTCTCCGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLPSKRL*SSPTSA
Trigger: GGCAGAAGTCGGAGAGCTGCAGAGGCGCTTGCTAGG...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGGCCACACAGTCTGACTaGTGTTGCCGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLATQSD*CCRLAS
Trigger: GGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGC...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLSGWTP*HRSSCP
Trigger: CGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACT...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGTGCCGGACTTTCCGCTaGTGGCTCTTGAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLCRTFR*WLLSMS
Trigger: TGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCA...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGCGGACTTTCCGCTGCTaGCTCTTGAGCATGTCATCC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLRTFRC*LLSMSS
Trigger: GGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCG...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACCTGCCCGCCGCCGCCTaGTCCTCTGGGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHLPAAA*SSGCTS
Trigger: GGACGTGCACCCAGAGGACCAGGCGGCGGCGGGCAG...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGATGTCATCCAAGTGGTaGATCTTCTCCCGCAACCCG +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLMSSKW*IFSRNP
Trigger: CGGGTTGCGGGAGAAGATCCACCACTTGGATGACAT...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGTTCTCCTTGAGCTCCTaGATGGTGGCGTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLFSLSS*MVASFD
Trigger: GTCAAAGGACGCCACCATCCAGGAGCTCAAGGAGAA...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGCGCCGCCTGGTCCTCTaGGTGCACGTCCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLRRLVL*VHVHQG
Trigger: ACCCTGGTGGACGTGCACCCAGAGGACCAGGCGGCG...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCTGCCCGCCGCCGCCTaGTCCTCTGGGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWLPAAA*SSGCTS
Trigger: GGACGTGCACCCAGAGGACCAGGCGGCGGCGGGCAG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGCTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLLRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTACGCTGCCCGCCGCCTaGTCCTCTGGGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVTLPAA*SSGCTS
Trigger: GGACGTGCACCCAGAGGACCAGGCGGCGGGCAGCGT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368849.8
CDS-3UTR TCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAGGACTCCACCAGTTCTaGAGCCAGAGAATGACCAGC +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPGLHQF*SQRMTS
Trigger: GCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCC...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAATGCCGCTTGGCCTCCTaGAGCTTGGCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQCRLAS*SLASKS
Trigger: GGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCA...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGCCTGGTCCTCTGGGTaGACGTCCACCAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQAWSSG*TSTRVH
Trigger: GTGTACCCTGGTGGACGTGCACCCAGAGGACCAGGC...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
3UTR CAA 72 bp CAGTCAAAGCTTAGGTTCACTGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QSKLRFTGSHQA*PGNPTICLQEA
Trigger: GGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCCAGTGAACCTAAGCTTTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTGCCGCTTGGCCTCCTaGAGCTTGGCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHCRLAS*SLASKS
Trigger: GGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGTTTTCTCGTTCTGCTTaGCAGTCAGCATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLFSRSA*QSALLL
Trigger: GAGCAACAATGCTGACTGCCAAGCAGAACGAGAAAA...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAAGGGCTGTGGGACTCTaGCTAAAGCCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPRAVGL*LKPFGF
Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCACAGCCCT...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTGCCGCTTGGCCTCCTaGAGCTTGGCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHCRLAS*SLASKS
Trigger: GGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAGAGAGAAGTCACACATaGCTGTCTGTAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPERSHT*LSVALE
Trigger: CTCTAGGGCTACAGACAGTCATGTGTGACTTCTCTC...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAGTCCCAGAAGAGTCCTaGTTGCCCTCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPVPEES*LPSFSK
Trigger: TTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGAC...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLRAAVP*IGARAP
Trigger: CGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACGCCTGGTCCTCTGGGTaGACGTCCACCAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHAWSSG*TSTRVH
Trigger: GTGTACCCTGGTGGACGTGCACCCAGAGGACCAGGC...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGAACATGGATATCACCTaGTCTGACCCCCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLNMDIT*SDPLIL
Trigger: TAAAATGAGGGGGTCAGAGCAGGTGATATCCATGTT...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCACCTAGCAAGCGCCTCTaGAGCTCTCCGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAPSKRL*SSPTSA
Trigger: GGCAGAAGTCGGAGAGCTGCAGAGGCGCTTGCTAGG...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGTGTCCACCTCAGGTaGGCTGCTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLGVHLR*AAVQGC
Trigger: ACAGCCCTGTACAGCAGCCCACCTGAGGTGGACACC...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGTGTCCACCTCAGGTaGGCTGCTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGVHLR*AAVQGC
Trigger: ACAGCCCTGTACAGCAGCCCACCTGAGGTGGACACC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITSQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAGGAGCCCGAAGTCCTaGGTGCAGCCAGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHRSPKS*VQPGDS
Trigger: ACTGTCCCCTGGCTGCACCCAGGACTTCGGGCTCCT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATATGCCGCTTGGCCTCCTaGAGCTTGGCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNICRLAS*SLASKS
Trigger: GGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCA...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQKSHTV*LVLPLG
Trigger: GCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTT...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTTCGCCAGTAAGGCCTaGTGCTCCGTCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHFASKA*CSVSIP
Trigger: AGGGATGGAGACGGAGCATCAGGCCTTACTGGCGAA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGGTGCTGAAGTTGCCATaGCTGATTTGTTTTTCTATC +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLVLKLP*LICFSI
Trigger: GATAGAAAAACAAATCAGTCATGGCAACTTCAGCAC...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTTTTCCACCACTCGGATaGCAGGCATGGGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITFPPLG*QAWASG
Trigger: GCCCGAAGCCCATGCCTGTCATCCGAGTGGTGGAAA...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACGGGGCTTGGGAATGGTaGGACACAGGAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHGAWEW*DTGARS
Trigger: ACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCC...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAAAAACCATGATGACCTaGAGGGTCATTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPKTMMT*RVIQSQ
Trigger: CTGGCTCTGAATGACCCTGCAGGTCATCATGGTTTT...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLSGWTP*HRSSCP
Trigger: CGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQDQLSG*TPWHRS
Trigger: AGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTC...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACACTGGTGTTGCCGCTTaGCCTCCTGAAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHTGVAA*PPEAWP
Trigger: TGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTGCCACACAGTCTGACTaGTGTTGCCGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSATQSD*CCRLAS
Trigger: GGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGC...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNISQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGACTCCACCAGTTCTaGAGCCAGAGAATGACCAGC +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLGLHQF*SQRMTS
Trigger: GCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCC...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLKSHTV*LVLPLG
Trigger: GCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGTATAGTACCATACTCTaGTGCCTATCTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLYSTIL*CLSTSQ
Trigger: TTGAGAAGTAGATAGGCATCAGAGTATGGTACTATA...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTTCGCCAGTAAGGCCTaGTGCTCCGTCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHFASKA*CSVSIP
Trigger: AGGGATGGAGACGGAGCATCAGGCCTTACTGGCGAA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCACTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPLDHSF*ILELLY
Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCATTTCCACCACTCGGATaGCAGGCATGGGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAFPPLG*QAWASG
Trigger: GCCCGAAGCCCATGCCTGTCATCCGAGTGGTGGAAA...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACTTTCCACCACTCGGATaGCAGGCATGGGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHFPPLG*QAWASG
Trigger: GCCCGAAGCCCATGCCTGTCATCCGAGTGGTGGAAA...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTARAAVP*IGARAP
Trigger: CGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAATACAAAGAGGATTTTaGTGGGACTGGTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPIQRGF*WDWWNP
Trigger: TGGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTAT...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTCCTAGCAAGCGCCTCTaGAGCTCTCCGACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SDPLILQMRELPEIPEHCPSKRL*SSPTSA
Trigger: GGCAGAAGTCGGAGAGCTGCAGAGGCGCTTGCTAGG...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCACGCCGCCTGGTCCTCTaGGTGCACGTCCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSRRLVL*VHVHQG
Trigger: ACCCTGGTGGACGTGCACCCAGAGGACCAGGCGGCG...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATCGCCGCCTGGTCCTCTaGGTGCACGTCCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYRRLVL*VHVHQG
Trigger: ACCCTGGTGGACGTGCACCCAGAGGACCAGGCGGCG...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVSGWTP*HRSSCP
Trigger: CGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAADQLSG*TPWHRS
Trigger: AGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTC...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTGGCCTCCTGAAGCTTaGCCAGCAAGTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWWPPEA*PASPAP
Trigger: CGGTGCAGGACTTGCTGGCCAAGCTTCAGGAGGCCA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATATGGCCTCCTGAAGCTTaGCCAGCAAGTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIWPPEA*PASPAP
Trigger: CGGTGCAGGACTTGCTGGCCAAGCTTCAGGAGGCCA...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTACTGGTGTTGCCGCTTaGCCTCCTGAAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSTGVAA*PPEAWP
Trigger: TGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAGCCACACAGTCTGACTaGTGTTGCCGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAATQSD*CCRLAS
Trigger: GGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGC...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCATCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCATTTTCTCGTTCTGCTTaGCAGTCAGCATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPFSRSA*QSALLL
Trigger: GAGCAACAATGCTGACTGCCAAGCAGAACGAGAAAA...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCACGGACTTTCCGCTGCTaGCTCTTGAGCATGTCATCC +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAARTFRC*LLSMSS
Trigger: GGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCG...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTGGACTCCACCAGTTCTaGAGCCAGAGAATGACCAGC +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSGLHQF*SQRMTS
Trigger: GCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCC...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTTCGCCAGTAAGGCCTaGTGCTCCGTCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWFASKA*CSVSIP
Trigger: AGGGATGGAGACGGAGCATCAGGCCTTACTGGCGAA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTCCGCTGCTGGCTCTTaGGCATGTCATCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVSAAGS*ACHPSG
Trigger: ACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAGGCGATTTTCTCCTTaGGCTCCTGGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSRRFSP*APGWWR
Trigger: ACGCCACCATCCAGGAGCTCAAGGAGAAAATCGCCT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTGGCATAGGTCTTCCTaGCCGCCTTCTGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVWHRSS*PPSGLC
Trigger: ACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368849.8
CDS-3UTR GCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGCAGCTCTCCGACTTCTaGCTCTTTCTGCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLQLSDF*LFLLHS
Trigger: AGAGTGGAGCAGAAAGAGGCAGAAGTCGGAGAGCTG...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCACAGCTCTCCGACTTCTaGCTCTTTCTGCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAQLSDF*LFLLHS
Trigger: AGAGTGGAGCAGAAAGAGGCAGAAGTCGGAGAGCTG...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGCAGTCAGCATTGTTaGTCCGAAGTTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGSQHC*SEVPLG
Trigger: CCCTAGAGGAACTTCGGAGCAACAATGCTGACTGCC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAGTGCCTTGAATAGGTaGTCGTGCTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHSALNR*SCSVCP
Trigger: TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAGTGCCTTGAATAGGTaGTCGTGCTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSSALNR*SCSVCP
Trigger: TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHDQLSG*TPWHRS
Trigger: AGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTC...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGGTGTCCACCTCAGGTaGGCTGCTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSGVHLR*AAVQGC
Trigger: ACAGCCCTGTACAGCAGCCCACCTGAGGTGGACACC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGACTGGTGTTGCCGCTTaGCCTCCTGAAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWTGVAA*PPEAWP
Trigger: TGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTTGTTCTGCTTCCCTCTaGTACCGGCTGAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITCSASL*YRLSVT
Trigger: GGTCACACTCAGCCGGTACCAGAGGGAAGCAGAACA...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTTGTTCTGCTTCCCTCTaGTACCGGCTGAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSCSASL*YRLSVT
Trigger: GGTCACACTCAGCCGGTACCAGAGGGAAGCAGAACA...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTGTTCTGCTTCCCTCTaGTACCGGCTGAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVCSASL*YRLSVT
Trigger: GGTCACACTCAGCCGGTACCAGAGGGAAGCAGAACA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGCCTGTCAGTTCACCCTaGAGAGTCAGCCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLPVSSP*RVSLRM
Trigger: CATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGG...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368849.8
CDS-3UTR CCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCGGACTTTCCGCTGCTaGCTCTTGAGCATGTCATCC +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCRTFRC*LLSMSS
Trigger: GGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCG...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGTTCTCCTTGAGCTCCTaGATGGTGGCGTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLFSLSS*MVASFD
Trigger: GTCAAAGGACGCCACCATCCAGGAGCTCAAGGAGAA...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGGACTCCACCAGTTCTaGAGCCAGAGAATGACCAGC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHGLHQF*SQRMTS
Trigger: GCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAAGGGCTGTGGGACTCTaGCTAAAGCCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAARAVGL*LKPFGF
Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCACAGCCCT...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIKSHTV*LVLPLG
Trigger: GCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCTGGGTCAAGAAGACTaGGGTGTGCCTGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWLGQED*GVPGGT
Trigger: TGTACCACCAGGCACACCTCAGTCTTCTTGACCCAG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACTCCGCTGCTGGCTCTTaGGCATGTCATCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHSAAGS*ACHPSG
Trigger: ACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGA...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAAGGCGATTTTCTCCTTaGGCTCCTGGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTARRFSP*APGWWR
Trigger: ACGCCACCATCCAGGAGCTCAAGGAGAAAATCGCCT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAGCTCTCACCAGGCCTTaGCAGGTAACCCCACTATCT +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIALTRP*QVTPLS
Trigger: AGATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGC...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTGCCGGACTTTCCGCTaGTGGCTCTTGAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWCRTFR*WLLSMS
Trigger: TGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATATGCCGGACTTTCCGCTaGTGGCTCTTGAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNICRTFR*WLLSMS
Trigger: TGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCA...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAGCTGCTCTATCATTTaGCGGACTTTCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSSCSII*RTFRCW
Trigger: CCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAGTGCCTTGAATAGGTaGTCGTGCTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNISALNR*SCSVCP
Trigger: TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGTGTCTTCCAAAGGGCTaGAGTGCCTTGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLCLPKG*SALNRC
Trigger: GCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTGCCCTGGCTCCTGCTTaGAGGACAATGTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCALAPA*RTMSSK
Trigger: TTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGC...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIDQLSG*TPWHRS
Trigger: AGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTC...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATACAGTTCCTGGCCTCCTaGATGTACTGGACCTCACTC +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIQFLAS*MYWTSL
Trigger: GAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTG...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTCTGTAGGCAGTTCCTaGCCTCCTGGATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVSVGSS*PPGCTG
Trigger: TCCAGTACATCCAGGAGGCCAGGAACTGCCTACAGA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCACTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAALRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAARLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTATGTCATCCAAGTGGTaGATCTTCTCCCGCAACCCG +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVMSSKW*IFSRNP
Trigger: CGGGTTGCGGGAGAAGATCCACCACTTGGATGACAT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTTCTCCTTGAGCTCCTaGATGGTGGCGTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVFSLSS*MVASFD
Trigger: GTCAAAGGACGCCACCATCCAGGAGCTCAAGGAGAA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCAGCCAACAGGGGCAGTaGGCTTCTCCGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCSQQGQ*ASPRQR
Trigger: CCTCTGCCTCGGAGAAGCCCACTGCCCCTGTTGGCT...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTTCTAGCACCACCTCCTaGATGTACTGGACCTCACTC +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCSSTTS*MYWTSL
Trigger: GAGTGAGGTCCAGTACATCCAGGAGGTGGTGCTAGA...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSKSHTV*LVLPLG
Trigger: GCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTT...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACGAGAGAAGTCACACATaGCTGTCTGTAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHERSHT*LSVALE
Trigger: CTCTAGGGCTACAGACAGTCATGTGTGACTTCTCTC...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATGGGGCTTGGGAATGGTaGGACACAGGAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYGAWEW*DTGARS
Trigger: ACTTCGGGCTCCTGTGTCTCACCATTCCCAAGCCCC...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGGGCTGCAGTGCCTTaGATAGGTGCTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSRAAVP*IGARAP
Trigger: CGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGTTCCTGTCAAGCTTaGTACTTATATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGSCQA*YLYPPG
Trigger: TCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR GCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAGGTTCCTGTCAAGCTTaGTACTTATATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAGSCQA*YLYPPG
Trigger: TCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACC...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368848.6
ENST00000368849.8
CDS-3UTR GCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAAAACCATGATGACCTaGAGGGTCATTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLKTMMT*RVIQSQ
Trigger: CTGGCTCTGAATGACCCTGCAGGTCATCATGGTTTT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAAAAACCATGATGACCTaGAGGGTCATTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAKTMMT*RVIQSQ
Trigger: CTGGCTCTGAATGACCCTGCAGGTCATCATGGTTTT...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAGCCATACAAAGAATATaGCACAGACAACAATATCAG +
Preference number: 4 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPAIQRI*HRQQYQ
Trigger: CTGATATTGTTGTCTGTGGCATATTCTTTGTATGGC...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATACAGCTCTCCGACTTCTaGCTCTTTCTGCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIQLSDF*LFLLHS
Trigger: AGAGTGGAGCAGAAAGAGGCAGAAGTCGGAGAGCTG...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAGGCAGTCAGCATTGTTaGTCCGAAGTTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIGSQHC*SEVPLG
Trigger: CCCTAGAGGAACTTCGGAGCAACAATGCTGACTGCC...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGAGCTGCTCTATCATTTaGCGGACTTTCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWSCSII*RTFRCW
Trigger: CCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTTGTCTTCCAAAGGGCTaGAGTGCCTTGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCCLPKG*SALNRC
Trigger: GCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTTGTCTTCCAAAGGGCTaGAGTGCCTTGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITCLPKG*SALNRC
Trigger: GCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSASWMY*TSLFSW
Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCCAGTTCCTGGCCTCCTaGATGTACTGGACCTCACTC +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSQFLAS*MYWTSL
Trigger: GAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTG...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTCTGTAGGCAGTTCCTaGCCTCCTGGATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWSVGSS*PPGCTG
Trigger: TCCAGTACATCCAGGAGGCCAGGAACTGCCTACAGA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAATGTATCTCCTGTCGATaGAGAGAATCTCCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQCISCR*RESPRF
Trigger: GAACCTAGGAGATTCTCTCCATCGACAGGAGATACA...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCGGTGTCCACCTCAGGTaGGCTGCTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCGVHLR*AAVQGC
Trigger: ACAGCCCTGTACAGCAGCCCACCTGAGGTGGACACC...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATTGGCCTCCTGAAGCTTaGCCAGCAAGTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYWPPEA*PASPAP
Trigger: CGGTGCAGGACTTGCTGGCCAAGCTTCAGGAGGCCA...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGCCACACAGTCTGACTaGTGTTGCCGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSATQSD*CCRLAS
Trigger: GGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITLRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTTCCTGCCCGCCTTCTaGGCTATGTGTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHFLPAF*AMCSSS
Trigger: TGAACTTGAACACATAGCCCAGAAGGCGGGCAGGAA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368849.8
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGATGTCATCCAAGTGGTaGATCTTCTCCCGCAACCCG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWMSSKW*IFSRNP
Trigger: CGGGTTGCGGGAGAAGATCCACCACTTGGATGACAT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAGCATGTCATCCAAGTaGTGGATCTTCTCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITSMSSK*WIFSRN
Trigger: GTTGCGGGAGAAGATCCACCACTTGGATGACATGCT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCNLMKA*LMAQPE
Trigger: CTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATT...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACAGGGCTGTGGGACTCTaGCTAAAGCCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHRAVGL*LKPFGF
Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCACAGCCCT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAATTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGGAGAGAAGTCACACATaGCTGTCTGTAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWERSHT*LSVALE
Trigger: CTCTAGGGCTACAGACAGTCATGTGTGACTTCTCTC...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHTGGTQ*KQFSGS
Trigger: AGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAGTCCCAGAAGAGTCCTaGTTGCCCTCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIVPEES*LPSFSK
Trigger: TTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGAC...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGTCCCAGAAGAGTCCTaGTTGCCCTCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SDPLILQMRELPEIPEHCVPEES*LPSFSK
Trigger: TTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGAC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAATGAGGGAACTCCCTaGAATCCCAGAGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLNEGTP*NPRALL
Trigger: TAACAATGCTCTGGGATTTCAGGGAGTTCCCTCATT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGATATCACCTGCTCTaGCCCCCTCATTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLGYHLL*PPHFTN
Trigger: ATTTGTAAAATGAGGGGGTCAGAGCAGGTGATATCC...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAGGATATCACCTGCTCTaGCCCCCTCATTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAGYHLL*PPHFTN
Trigger: ATTTGTAAAATGAGGGGGTCAGAGCAGGTGATATCC...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACCTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHLDHSF*ILELLY
Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACAAGAAGACTGAGGTGTaGCTGGTGGTACACCTTAGG +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHKKTEV*LVVHLR
Trigger: CCTAAGGTGTACCACCAGGCACACCTCAGTCTTCTT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACCAGAAGAGTCCTGATTaGCCTCTTTCTCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHQKSPD*PLSPNN
Trigger: GTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTG...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGCAGAAGAGTCCTGATTaGCCTCTTTCTCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLQKSPD*PLSPNN
Trigger: GTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTG...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATACTTAAGGATTCTGGCTaGGTGAGCCACATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNILKDSG*VSHIEP
Trigger: AGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAG...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACCTTAAGGATTCTGGCTaGGTGAGCCACATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHLKDSG*VSHIEP
Trigger: AGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAG...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCTTAAGGATTCTGGCTaGGTGAGCCACATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWLKDSG*VSHIEP
Trigger: AGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAAACATGGATATCACCTaGTCTGACCCCCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQNMDIT*SDPLIL
Trigger: TAAAATGAGGGGGTCAGAGCAGGTGATATCCATGTT...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGGCAGTCAGCATTGTTaGTCCGAAGTTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSGSQHC*SEVPLG
Trigger: CCCTAGAGGAACTTCGGAGCAACAATGCTGACTGCC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCAGCTGCTCTATCATTTaGCGGACTTTCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSSCSII*RTFRCW
Trigger: CCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCT...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAATTTGAATTCTGGAGCTaGTCTATCATTTGCCGGACT +
Preference number: 4 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQFEFWS*SIICRT
Trigger: AGTCCGGCAAATGATAGAGCAGCTCCAGAATTCAAA...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCATGTTCCATCCGGTCATaGATCTCTAAATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAACSIRS*ISKFSA
Trigger: GGCAGAGAATTTAGAGATGCATGACCGGATGGAACA...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTGTTCCATCCGGTCATaGATCTCTAAATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHCSIRS*ISKFSA
Trigger: GGCAGAGAATTTAGAGATGCATGACCGGATGGAACA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCGCCCTGGCTCCTGCTTaGAGGACAATGTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSALAPA*RTMSSK
Trigger: TTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGC...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYSGWTP*HRSSCP
Trigger: CGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATACTGGTGTTGCCGCTTaGCCTCCTGAAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYTGVAA*PPEAWP
Trigger: TGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGTCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGAGACTGAGGTGTGCCTaGTGGTACACCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWRLRCA*WYTLGK
Trigger: TTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCACCCAGAGCATTGTTATaGACAAAGCCAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAPRALL*TKPECE
Trigger: CTCACATTCTGGCTTTGTCCATAACAATGCTCTGGG...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAGCATGTCATCCAAGTaGTGGATCTTCTCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNISMSSK*WIFSRN
Trigger: GTTGCGGGAGAAGATCCACCACTTGGATGACATGCT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAGTGGCGTCCTTTGACTaGATCACAGCTTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAAVASFD*ITAFEF
Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGACGCCAC...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGTGGCGTCCTTTGACTaGATCACAGCTTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHVASFD*ITAFEF
Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGACGCCAC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATAAATCTGATGAAGGCCTaGCTTATGGCACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNINLMKA*LMAQPE
Trigger: CTCTGGCTGTGCCATAAGCCAGGCCTTCATCAGATT...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHTGGTQ*KQFSGS
Trigger: AGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAATGAGGGAACTCCCTaGAATCCCAGAGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSNEGTP*NPRALL
Trigger: TAACAATGCTCTGGGATTTCAGGGAGTTCCCTCATT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCCCTCATTTTACAAATaGGGGAACTCCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITPSFYK*GNSLKS
Trigger: GGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGG...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCTCCGCTGCTGGCTCTTaGGCATGTCATCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCSAAGS*ACHPSG
Trigger: ACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGA...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAGGCGATTTTCTCCTTaGGCTCCTGGATGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYRRFSP*APGWWR
Trigger: ACGCCACCATCCAGGAGCTCAAGGAGAAAATCGCCT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGCCTGGTCCTCTGGGTaGACGTCCACCAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRAWSSG*TSTRVH
Trigger: GTGTACCCTGGTGGACGTGCACCCAGAGGACCAGGC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCACATTACTTTGTTCTaGTTCCCTCTGGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWHITLF*FPLVPA
Trigger: AGCCGGTACCAGAGGGAAGCAGAACAAAGTAATGTG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTCACATTACTTTGTTCTaGTTCCCTCTGGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: SDPLILQMRELPEIPEHCHITLF*FPLVPA
Trigger: AGCCGGTACCAGAGGGAAGCAGAACAAAGTAATGTG...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWLTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCAGAAGAGTCCTGATTaGCCTCTTTCTCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCQKSPD*PLSPNN
Trigger: GTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTG...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAGCCTTTTCTCGTTCTaGTTGGCAGTCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSSLFSF*LAVSIV
Trigger: AACAATGCTGACTGCCAAGCAGAACGAGAAAAGGCT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSASWMY*TSLFSW
Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCCAGTTCCTGGCCTCCTaGATGTACTGGACCTCACTC +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCQFLAS*MYWTSL
Trigger: GAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTG...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCCTGAGGTGTGCCTGGTaGTACACCTTAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSLRCAW*YTLGKI
Trigger: GATTTTCCCTAAGGTGTACCACCAGGCACACCTCAG...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACCCCAGAGCATTGTTATaGACAAAGCCAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHPRALL*TKPECE
Trigger: CTCACATTCTGGCTTTGTCCATAACAATGCTCTGGG...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACATTCTCCAATCACTCTaGACATCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHILQSL*TSVSPA
Trigger: AGCTGGAGACACAGATGTCCAGAGTGATTGGAGAAT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTATTCTCCAATCACTCTaGACATCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSILQSL*TSVSPA
Trigger: AGCTGGAGACACAGATGTCCAGAGTGATTGGAGAAT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAAATGAGGGAACTCCCTaGAATCCCAGAGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTANEGTP*NPRALL
Trigger: TAACAATGCTCTGGGATTTCAGGGAGTTCCCTCATT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGCCCTCATTTTACAAATaGGGGAACTCCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWPSFYK*GNSLKS
Trigger: GGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGG...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAGGATATCACCTGCTCTaGCCCCCTCATTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAGYHLL*PPHFTN
Trigger: ATTTGTAAAATGAGGGGGTCAGAGCAGGTGATATCC...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCCACATTACTTTGTTCTaGTTCCCTCTGGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSHITLF*FPLVPA
Trigger: AGCCGGTACCAGAGGGAAGCAGAACAAAGTAATGTG...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACTTTGAATTCTGGAGCTaGTCTATCATTTGCCGGACT +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHFEFWS*SIICRT
Trigger: AGTCCGGCAAATGATAGAGCAGCTCCAGAATTCAAA...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACTGTATCTCCTGTCGATaGAGAGAATCTCCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHCISCR*RESPRF
Trigger: GAACCTAGGAGATTCTCTCCATCGACAGGAGATACA...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATATTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCATTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AACTCATCTGGGTCCCAGAAGAGTCCTGATTGCCCTCTTTCTCCAAACAACATACCCAGAGCATTGTTATaGACAAAGCCAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: NSSGSQKSPDCPLSPNNIPRALL*TKPECE
Trigger: CTCACATTCTGGCTTTGTCCATAACAATGCTCTGGG...TATGTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGACCCAGATGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACTTTTCTCGTTCTGCTTaGCAGTCAGCATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHFSRSA*QSALLL
Trigger: GAGCAACAATGCTGACTGCCAAGCAGAACGAGAAAA...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACACAGCTTTTGAATTCTaGAGCTGCTCTATCATTTGC +
Preference number: 4 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHTAFEF*SCSIIC
Trigger: GCAAATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGTGGCGTCCTTTGACTaGATCACAGCTTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHVASFD*ITAFEF
Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGACGCCAC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCACCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCTSWMY*TSLFSW
Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGT...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCAGGGCTGTGGGACTCTaGCTAAAGCCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCRAVGL*LKPFGF
Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCACAGCCCT...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGTTTGTTGCTAAGAACTaGGCTGTGTTTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWFVAKN*AVFVEG
Trigger: TCCTTCCACAAACACAGCTCAGTTCTTAGCAACAAA...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGTCCCAGAAGAGTCCTaGTTGCCCTCTTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSVPEES*LPSFSK
Trigger: TTTGGAGAAAGAGGGCAATCAGGACTCTTCTGGGAC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCAATGAGGGAACTCCCTaGAATCCCAGAGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSNEGTP*NPRALL
Trigger: TAACAATGCTCTGGGATTTCAGGGAGTTCCCTCATT...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACGTGCTGAAGTTGCCATaGCTGATTTGTTTTTCTATC +
Preference number: 4 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHVLKLP*LICFSI
Trigger: GATAGAAAAACAAATCAGTCATGGCAACTTCAGCAC...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAAGAAGACTGAGGTGTaGCTGGTGGTACACCTTAGG +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSKKTEV*LVVHLR
Trigger: CCTAAGGTGTACCACCAGGCACACCTCAGTCTTCTT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACAACATGGATATCACCTaGTCTGACCCCCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHNMDIT*SDPLIL
Trigger: TAAAATGAGGGGGTCAGAGCAGGTGATATCCATGTT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCTGTATCTCCTGTCGATaGAGAGAATCTCCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSCISCR*RESPRF
Trigger: GAACCTAGGAGATTCTCTCCATCGACAGGAGATACA...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTATAAAAGACCAATTATaGAGCAAGGGGTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITIKDQL*SKGFRR
Trigger: CCTTCTGAACCCCTTGCTCCATAATTGGTCTTTTAT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCCCCAGAGCATTGTTATaGACAAAGCCAGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSPRALL*TKPECE
Trigger: CTCACATTCTGGCTTTGTCCATAACAATGCTCTGGG...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTTATAGTACCATACTCTaGTGCCTATCTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCYSTIL*CLSTSQ
Trigger: TTGAGAAGTAGATAGGCATCAGAGTATGGTACTATA...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCACTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSLTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCCTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCLTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATAAAACCATGATGACCTaGAGGGTCATTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYKTMMT*RVIQSQ
Trigger: CTGGCTCTGAATGACCCTGCAGGTCATCATGGTTTT...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRASWMY*TSLFSW
Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGATGTTCTGCTTCCCTCTaGTACCGGCTGAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRCSASL*YRLSVT
Trigger: GGTCACACTCAGCCGGTACCAGAGGGAAGCAGAACA...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAATAAAAGACCAATTATaGAGCAAGGGGTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAIKDQL*SKGFRR
Trigger: CCTTCTGAACCCCTTGCTCCATAATTGGTCTTTTAT...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGACAGCTTTTGAATTCTaGAGCTGCTCTATCATTTGC +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWTAFEF*SCSIIC
Trigger: GCAAATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACACAGCTTTTGAATTCTaGAGCTGCTCTATCATTTGC +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHTAFEF*SCSIIC
Trigger: GCAAATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTTTAATATTCTTCTCGTaGATCATCTTGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SDPLILQMRELPEIPEHCLIFFS*IILSPD
Trigger: GTCTGGAGACAAGATGATTCACGAGAAGAATATTAA...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATGGATATCACCTGCTCTaGCCCCCTCATTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYGYHLL*PPHFTN
Trigger: ATTTGTAAAATGAGGGGGTCAGAGCAGGTGATATCC...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCCTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCLDHSF*ILELLY
Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCACAGAAGAGTCCTGATTaGCCTCTTTCTCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSQKSPD*PLSPNN
Trigger: GTTGTTTGGAGAAAGAGGGCAATCAGGACTCTTCTG...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGGCCATACAAAGAATATaGCACAGACAACAATATCAG +
Preference number: 4 (lower is better)
Translates to: KDQLWSKGFRRASEELIWAIQRI*HRQQYQ
Trigger: CTGATATTGTTGTCTGTGGCATATTCTTTGTATGGC...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACGCCATACAAAGAATATaGCACAGACAACAATATCAG +
Preference number: 4 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHAIQRI*HRQQYQ
Trigger: CTGATATTGTTGTCTGTGGCATATTCTTTGTATGGC...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATTGTTCCATCCGGTCATaGATCTCTAAATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGFKQIQILQEKAIELWYCSIRS*ISKFSA
Trigger: GGCAGAGAATTTAGAGATGCATGACCGGATGGAACA...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCATCCCTAAAGAGACTCTaGGAGTTTTCACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSSLKRL*EFSQQR
Trigger: TCTCTGCTGTGAAAACTCCCAGAGTCTCTTTAGGGA...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCTTTTGCTGGGACTGGTaGAACCCAGTGAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCFCWDW*NPVKTV
Trigger: AACTGTTTTCACTGGGTTCCACCAGTCCCAGCAAAA...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCATTCTCCAATCACTCTaGACATCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCILQSL*TSVSPA
Trigger: AGCTGGAGACACAGATGTCCAGAGTGATTGGAGAAT...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCTATAGTACCATACTCTaGTGCCTATCTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SVALENFSAKGYSLNVHSYSTIL*CLSTSQ
Trigger: TTGAGAAGTAGATAGGCATCAGAGTATGGTACTATA...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAAAGAAGACTGAGGTGTaGCTGGTGGTACACCTTAGG +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRKKTEV*LVVHLR
Trigger: CCTAAGGTGTACCACCAGGCACACCTCAGTCTTCTT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAACATGGATATCACCTaGTCTGACCCCCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSNMDIT*SDPLIL
Trigger: TAAAATGAGGGGGTCAGAGCAGGTGATATCCATGTT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAACTGGTGGAACCCAGTaGAAACAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRTGGTQ*KQFSGS
Trigger: AGAGCCTGAAAACTGTTTTCACTGGGTTCCACCAGT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGACTCACCTTCCTTAGCTaGAGAGCAAGTTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRLTFLS*RASLKE
Trigger: CTCCTTCAAACTTGCTCTGCAGCTAAGGAAGGTGAG...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGGATTTTGCTGGGACTaGTGGAACCCAGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRGFCWD*WNPVKT
Trigger: TGTTTTCACTGGGTTCCACCAGTCCCAGCAAAATCC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAAAACAACATATACTCTaGCCCCAAAGCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRKQHIL*PQSLRE
Trigger: TTCCCTGAGGCTTTGGGGTCAGAGTATATGTTGTTT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR GCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAAGCCTTTTCTCGTTCTaGTTGGCAGTCAGCATTGTT +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRSLFSF*LAVSIV
Trigger: AACAATGCTGACTGCCAAGCAGAACGAGAAAAGGCT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGTGCTGAAGTTGCCATaGCTGATTTGTTTTTCTATC +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRVLKLP*LICFSI
Trigger: GATAGAAAAACAAATCAGTCATGGCAACTTCAGCAC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAATAAAAGACCAATTATaGAGCAAGGGGTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRIKDQL*SKGFRR
Trigger: CCTTCTGAACCCCTTGCTCCATAATTGGTCTTTTAT...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR TCA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGATATAGTACCATACTCTaGTGCCTATCTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRYSTIL*CLSTSQ
Trigger: TTGAGAAGTAGATAGGCATCAGAGTATGGTACTATA...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGCCCGGGTTCTCTGTCTaGGCCCGGGCCTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLPGFSV*ARAWVL
Trigger: CAGCACCCAGGCCCGGGCCAAGACAGAGAACCCGGG...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 90 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCGCCGCCTGGTCCTCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: PVLKPENDQLSGWTP*HRSSCPPPPGPLGA
Trigger: TGCACCCAGAGGACCAGGCGGCGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS CCA 90 bp GGGACTCCACCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCGCCGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GTPPVLKPENDQLSG*TPWHRSSCPPPPGP
Trigger: AGGACCAGGCGGCGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS-3UTR CAA 90 bp CCTTGCCAGGTAACCCCACTATCTGTCTGCAGGAGGCCAGGGCAGCGTAGGCTGTTCCGCTGCTGGCTCTaGAGCATGTCATCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PCQVTPLSVCRRPGQRRLFRCWL*SMSSKW
Trigger: CCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAA...CAGCCTACGCTGCCCTGGCCTCCTGCAGACAGATAGTGGGGTTACCTGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 90 bp GCCTTCTGGGCTATGTGTTCAAGTTCATCTCCTGTCAGTTCACCCTaGAGAGTCAGCCTGAGAATGTCCACGCTGCCCGCCGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AFWAMCSSSSPVSSP*RVSLRMSTLPAAWS
Trigger: GGACCAGGCGGCGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGATGAACTTGAACACATAGCCCAGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 90 bp GGGACTCCACCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCTGGCCAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: GTPPVLKPENDQLSG*TPWHRSSCPPGQRE
Trigger: CTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CCA 90 bp GGGACTCCACCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCTTCTGGGCTATGT +
Preference number: 5 (lower is better)
Translates to: GTPPVLKPENDQLSG*TPWHRSSCPPSGLC
Trigger: ACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGGTGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 90 bp TGCCGGACTTTCCGCTGCTGGCTCTTGAGCATGTCATCCAAGTGGTaGATCTTCTCCCGCAACCCGGCCACTTCCTTTTCCAGGGTAGCA +
Preference number: 5 (lower is better)
Translates to: CRTFRCWLLSMSSKW*IFSRNPATSFSRVA
Trigger: TGCTACCCTGGAAAAGGAAGTGGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 90 bp TCTGGAGCTGCTCTATCATTTGCCGGACTTTCCGCTGCTGGCTCTTaGGCATGTCATCCAAGTGGTGGATCTTCTCCCGCAACCCGGCCA +
Preference number: 5 (lower is better)
Translates to: SGAALSFAGLSAAGS*ACHPSGGSSPATRP
Trigger: TGGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 90 bp GGACACCATGGCATAGGTCTTCCTGCCCGCCTGGCCAAAGAGAGATaGGAGAGAGAGAGAGAGAGAGAGATGGCTCAGACACCACATGGC +
Preference number: 5 (lower is better)
Translates to: GHHGIGLPARLAKER*EREREREMAQTPHG
Trigger: GCCATGTGGTGTCTGAGCCATCTCTCTCTCTCTCTCTCTCTCTCATCTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CCA 90 bp AAGCCACACAGTCTGACTGGTGTTGCCGCTTGGCCTCCTGAAGCTTaGCCAGCAAGTCCTGCACCGTCTTCCTCAAGCTCTCAACATCCT +
Preference number: 5 (lower is better)
Translates to: KPHSLTGVAAWPPEA*PASPAPSSSSSQHP
Trigger: AGGATGTTGAGAGCTTGAGGAAGACGGTGCAGGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
ENST00000490156.1
ENST00000498606.5
CDS CCA 90 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCTGGCCAAAGAGAGATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PVLKPENDQLSGWTP*HRSSCPPGQREMRE
Trigger: CTCTCTCATCTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS-3UTR CAA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCACCCGGGTTCTCTGTCTaGGCCCGGGCCTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAPGFSV*ARAWVL
Trigger: CAGCACCCAGGCCCGGGCCAAGACAGAGAACCCGGG...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS GCA 90 bp GAGAATGACCAGCTGAGTGGCTGGACACCATGGCATAGGTCTTCCTaGCCGCCTGGCCAAAGAGAGATGAGAGAGAGAGAGAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ENDQLSGWTPWHRSS*PPGQREMRERERER
Trigger: TCTCTCTCTCTCTCTCTCTCTCATCTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CCA 90 bp ATTTGCCGGACTTTCCGCTGCTGGCTCTTGAGCATGTCATCCAAGTaGTGGATCTTCTCCCGCAACCCGGCCACTTCCTTTTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: ICRTFRCWLLSMSSK*WIFSRNPATSFSRV
Trigger: TACCCTGGAAAAGGAAGTGGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGTAGCCCTAGAGAATTTTTCCGCAAAAGGCTACTCCCTGAATGTACATTCCCCCGGGTTCTCTGTCTaGGCCCGGGCCTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SVALENFSAKGYSLNVHSPGFSV*ARAWVL
Trigger: CAGCACCCAGGCCCGGGCCAAGACAGAGAACCCGGG...GGAATGTACATTCAGGGAGTAGCCTTTTGCGGAAAAATTCTCTAGGGCTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 90 bp CCCGGGTTCTCTGTCTTGGCCCGGGCCTGGGTGCTGAAGTTGCCATaGCTGATTTGTTTTTCTATCAGGTGTTCCATCCGGTCATGCATC +
Preference number: 5 (lower is better)
Translates to: PGFSVLARAWVLKLP*LICFSIRCSIRSCI
Trigger: GATGCATGACCGGATGGAACACCTGATAGAAAAACAAATCAGTCATGGCAACTTCAGCACCCAGGCCCGGGCCAAGACAGAGAACCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 90 bp ACCTTCTCCCCAAATCCCAAATCTCACCTCAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGCCTCCTGAAGCTTGGCCAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: TFSPNPKSHLKSHTV*LVLPLGLLKLGQQV
Trigger: GACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTTGAGGTGAGATTTGGGATTTGGGGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498606.5
CDS CCA 90 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCTTCTGGGCTATGTGTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: PVLKPENDQLSGWTP*HRSSCPPSGLCVQV
Trigger: AACTTGAACACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS-3UTR CAA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 5 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGTCTTCCAAAGGGCTGCAGTGCCTTGAATAGGTGCTCGTGCTCCGTCTGCCCAAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 5 (lower is better)
Translates to: CLPKGCSALNRCSCSVCPNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...TGGGCAGACGGAGCACGAGCACCTATTCAAGGCACTGCAGCCCTTTGGAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCAAAGCCTCAGGGAAAGTAGACTCACCTTCCTTAGCTGCAGAGCAAGAGCTGCTCTATCATTaGCCGGACTTTCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SDPKASGKVDSPSLAAEQELLYH*PDFPLL
Trigger: CAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTC...TTGCTCTGCAGCTAAGGAAGGTGAGTCTACTTTCCCTGAGGCTTTGGGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 5 (lower is better)
Translates to: SDPLILQMRELPEIPEHCGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGTTCGGGCTAGGCGGCTaGGATATCCTAATACTGCCC +
Preference number: 5 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLFGLGG*DILILP
Trigger: GGGCAGTATTAGGATATCCAAGCCGCCTAGCCCGAA...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTGCCCTGGCTCCTGCTaGCAGGACAATGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHCPGSC*QDNVFQ
Trigger: TTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS GCA 90 bp GTATCTCCTGTCGATGGAGAGAATCTCCTAGGTTCCTGTCAAGCTTaGTACTTATATCCTCCCGGAGCTTCTGTAGGCAGTTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSPVDGENLLGSCQA*YLYPPGASVGSSWP
Trigger: AGGCCAGGAACTGCCTACAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGACAGGAGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000461859.1
ENST00000498606.5
CDS CCA 90 bp TTTGAATTCTGGAGCTGCTCTATCATTTGCCGGACTTTCCGCTGCTaGCTCTTGAGCATGTCATCCAAGTGGTGGATCTTCTCCCGCAAC +
Preference number: 5 (lower is better)
Translates to: FEFWSCSIICRTFRC*LLSMSSKWWIFSRN
Trigger: GTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCAGAATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACTATAATCCTAGCACTTaGGGAAGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHYNPST*GSRGGW
Trigger: CCACCCACCTCGGCTTCCCAAAGTGCTAGGATTATA...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTTCCGCTGCTGGCTCTaGAGCATGTCATCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVFRCWL*SMSSKW
Trigger: CCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTGAGCTGCTCTATCATTaGCCGGACTTTCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCELLYH*PDFPLL
Trigger: CAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTC...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTGAGCTGCTCTATCATTaGCCGGACTTTCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSELLYH*PDFPLL
Trigger: CAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTC...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGATGGTGGCGTCCTTaGACTGGATCACAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLGWWRP*TGSQLL
Trigger: CAAAAGCTGTGATCCAGTCAAAGGACGCCACCATCC...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTTTCGGGCTAGGCGGCTaGGATATCCTAATACTGCCC +
Preference number: 5 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCFGLGG*DILILP
Trigger: GGGCAGTATTAGGATATCCAAGCCGCCTAGCCCGAA...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTTATAATCCTAGCACTTaGGGAAGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVYNPST*GSRGGW
Trigger: CCACCCACCTCGGCTTCCCAAAGTGCTAGGATTATA...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTGCTTGGCAGTCAGCATaGTTGCTCCGAAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVAWQSA*LLRSSS
Trigger: AGAGGAACTTCGGAGCAACAATGCTGACTGCCAAGC...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTAGGTTCCTGTCAAGCTaGCTACTTATATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCRFLSS*LLISSR
Trigger: CCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCT...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CAA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCGGCTCTCACCAGGCCTaGCCAGGTAACCCCACTATC +
Preference number: 5 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCGSHQA*PGNPTI
Trigger: GATAGTGGGGTTACCTGGCAAGGCCTGGTGAGAGCC...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AAAACAGTTTTCAGGCTCTGGGTCAAGAAGACTGAGGTGTGCCTGGTGGTACACAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 5 (lower is better)
Translates to: KTVFRLWVKKTEVCLVVHNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...GTGTACCACCAGGCACACCTCAGTCTTCTTGACCCAGAGCCTGAAAACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTTATAATCCTAGCACTTaGGGAAGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SDPLILQMRELPEIPEHCYNPST*GSRGGW
Trigger: CCACCCACCTCGGCTTCCCAAAGTGCTAGGATTATA...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAATGTGAGCCCAGTCTaGAGACACAGAAACACACAG +
Preference number: 5 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLNVSPV*RHRNTQ
Trigger: CTGTGTGTTTCTGTGTCTCAAGACTGGGCTCACATT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGCTTGGCAGTCAGCATaGTTGCTCCGAAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SDPLILQMRELPEIPEHCAWQSA*LLRSSS
Trigger: AGAGGAACTTCGGAGCAACAATGCTGACTGCCAAGC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTAGGTTCCTGTCAAGCTaGCTACTTATATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SDPLILQMRELPEIPEHCRFLSS*LLISSR
Trigger: CCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCT...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
CDS-3UTR CAA 90 bp TATAGATATTGCCCTGGCTCCTGCTTGCAGGACAATGTCTTCCAAAGGGCTGCAAGAACTGAGCTGTGTTaGTGGAAGGAACTTCATTCC +
Preference number: 5 (lower is better)
Translates to: YRYCPGSCLQDNVFQRAARTELC*WKELHS
Trigger: GGAATGAAGTTCCTTCCACAAACACAGCTCAGTTCT...TGCAGCCCTTTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCAATATCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 5 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTAATACAAAGAGGATTTaGCTGGGACTGGTGGAACCC +
Preference number: 5 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVNTKRI*LGLVEP
Trigger: GGGTTCCACCAGTCCCAGCAAAATCCTCTTTGTATT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTAATGTGAGCCCAGTCTaGAGACACAGAAACACACAG +
Preference number: 5 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITNVSPV*RHRNTQ
Trigger: CTGTGTGTTTCTGTGTCTCAAGACTGGGCTCACATT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTCTTTTCTCGTTCTGCTaGGCAGTCAGCATTGTTGCT +
Preference number: 5 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSLFSFC*AVSIVA
Trigger: AGCAACAATGCTGACTGCCAAGCAGAACGAGAAAAG...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 90 bp GGACCCAACCATGGACCATTTCCTATTACCTGTATCTCCTGTCGATaGAGAGAATCTCCTAGGTTCCTGTCAAGCTTGCTACTTATATCC +
Preference number: 5 (lower is better)
Translates to: GPNHGPFPITCISCR*RESPRFLSSLLLIS
Trigger: GGATATAAGTAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGACAGGAGATACAGGTAATAGGAAATGGTCCATGGTTGGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS-3UTR CAA 90 bp AGACTTAAGGATTCTGGCTGCGTGAGCCACATAGAGCCTAAACACTTAATCCACCTTTTCTCGTTCTGCTaGGCAGTCAGCATTGTTGCT +
Preference number: 5 (lower is better)
Translates to: RLKDSGCVSHIEPKHLIHLFSFC*AVSIVA
Trigger: AGCAACAATGCTGACTGCCAAGCAGAACGAGAAAAG...GTGGATTAAGTGTTTAGGCTCTATGTGGCTCACGCAGCCAGAATCCTTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATTTCCGCTGCTGGCTCTaGAGCATGTCATCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PGFKQIQILQEKAIELWYFRCWL*SMSSKW
Trigger: CCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAA...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ACCTGCAGGGTCATTCAGAGCCAGGATAAAAGACCAATTATGGAGCAAGGGGTTACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: TCRVIQSQDKRPIMEQGVTGSQL*NSGAAL
Trigger: TAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGT...AACCCCTTGCTCCATAATTGGTCTTTTATCCTGGCTCTGAATGACCCTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CTGAGCTGTGTTTGTGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: LSCVCGRNFIPPGHSPITTGSQL*NSGAAL
Trigger: TAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGT...AGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCACAAACACAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATTTCGGGCTAGGCGGCTaGGATATCCTAATACTGCCC +
Preference number: 5 (lower is better)
Translates to: PGFKQIQILQEKAIELWYFGLGG*DILILP
Trigger: GGGCAGTATTAGGATATCCAAGCCGCCTAGCCCGAA...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCTGCCCTGGCTCCTGCTaGCAGGACAATGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCCPGSC*QDNVFQ
Trigger: TTGGAAGACATTGTCCTGCAAGCAGGAGCCAGGGCA...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp CCCGGTTTCAAGCAAATCCAAATACTGCAAGAGAAGGCTATAGAACTTTGGTATGCTTGGCAGTCAGCATaGTTGCTCCGAAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PGFKQIQILQEKAIELWYAWQSA*LLRSSS
Trigger: AGAGGAACTTCGGAGCAACAATGCTGACTGCCAAGC...ATACCAAAGTTCTATAGCCTTCTCTTGCAGTATTTGGATTTGCTTGAAACCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AAAGACCAATTATGGAGCAAGGGGTTCAGAAGGGCTAGTGAAGAACTCATCTGGACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: KDQLWSKGFRRASEELIWTGSQL*NSGAAL
Trigger: TAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGT...CCAGATGAGTTCTTCACTAGCCCTTCTGAACCCCTTGCTCCATAATTGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAGCAAATCCAAATACTGCGGATGGTGGCGTCCTTaGACTGGATCACAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LTSLMGTVFPVSSKSKYCGWWRP*TGSQLL
Trigger: CAAAAGCTGTGATCCAGTCAAAGGACGCCACCATCC...GCAGTATTTGGATTTGCTTGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AGACTGAGGTGTGCCTGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: RLRCAWWYTLGKIPKETLKTNSL*LRTELC
Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...CAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCAGGCACACCTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp ATCCCAGAGCATTGTTATGGACAAAGCCAGAATGTGAGCCCAGTCTTGAGACACAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: IPEHCYGQSQNVSPVLRHKTNSL*LRTELC
Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...GTGTCTCAAGACTGGGCTCACATTCTGGCTTTGTCCATAACAATGCTCTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp GAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTCTAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: EGTSFPQDILQSLWTSVSKTNSL*LRTELC
Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...AGACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGGAAGGAACTTCATTCCCCCAGGACATTCTCCAATCACTCTGGACATCTGTGTAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: WKELHSPRTFSNHSGHLCKTNSL*LRTELC
Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...ACACAGATGTCCAGAGTGATTGGAGAATGTCCTGGGGGAATGAAGTTCCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAAATGTGAGCCCAGTCTaGAGACACAGAAACACACAG +
Preference number: 5 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSNVSPV*RHRNTQ
Trigger: CTGTGTGTTTCTGTGTCTCAAGACTGGGCTCACATT...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCACTTTTCTCGTTCTGCTaGGCAGTCAGCATTGTTGCT +
Preference number: 5 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSLFSFC*AVSIVA
Trigger: AGCAACAATGCTGACTGCCAAGCAGAACGAGAAAAG...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TGGTGGTACACCTTAGGGAAAATCCCTAAAGAGACTCTGGGAGTTTTCACAGCAGTTGCCATGACTGATTaGTTTTTCTATCAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: WWYTLGKIPKETLGVFTAVAMTD*FFYQVF
Trigger: GAACACCTGATAGAAAAACAAATCAGTCATGGCAAC...TGCTGTGAAAACTCCCAGAGTCTCTTTAGGGATTTTCCCTAAGGTGTACCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TCTGACCCCCTCATTTTACAAATGAGGGAACTCCCTGAAATCCCAGAGCATTGTGTTGCCATGACTGATTaGTTTTTCTATCAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SDPLILQMRELPEIPEHCVAMTD*FFYQVF
Trigger: GAACACCTGATAGAAAAACAAATCAGTCATGGCAAC...ACAATGCTCTGGGATTTCAGGGAGTTCCCTCATTTGTAAAATGAGGGGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp TTAAATTCGCCATACAAAGAATATGCCACAGACAACAATATCAGAAAGGGAAGAGGATGGTGGCGTCCTTaGACTGGATCACAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LNSPYKEYATDNNIRKGRGWWRP*TGSQLL
Trigger: CAAAAGCTGTGATCCAGTCAAAGGACGCCACCATCC...TCTTCCCTTTCTGATATTGTTGTCTGTGGCATATTCTTTGTATGGCGAATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS-3UTR CAA 90 bp AATAGTGTCACTCTGACATTAACAAGCCTAATGGGAACAGTTTTCCCGGTTTCAGTTGCCATGACTGATTaGTTTTTCTATCAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: NSVTLTLTSLMGTVFPVSVAMTD*FFYQVF
Trigger: GAACACCTGATAGAAAAACAAATCAGTCATGGCAAC...TGAAACCGGGAAAACTGTTCCCATTAGGCTTGTTAATGTCAGAGTGACACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS GCA 72 bp AGAATGTCCACGCTGCCCGCCGCCTGGTCCTCTGGGTaGACGTCCACCAGGGTACACCAGTTCCGCGTCCCG +
Preference number: 6 (lower is better)
Translates to: RMSTLPAAWSSG*TSTRVHQFRVP
Trigger: CGGGACGCGGAACTGGTGTACCCTGGTGGACGTGCACCCAGAGGACCAGGCGGCGGGCAGCGTGGACATTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 72 bp GGCATAGGTCTTCCTGCCCGCCGCCGCCTGGTCCTCTaGGTGCACGTCCACCAGGGTACACCAGTTCCGCGT +
Preference number: 6 (lower is better)
Translates to: GIGLPARRRLVL*VHVHQGTPVPR
Trigger: ACGCGGAACTGGTGTACCCTGGTGGACGTGCACCCAGAGGACCAGGCGGCGGCGGGCAGGAAGACCTATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS CCA 72 bp AAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCGCCGCCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: KPENDQLSGWTP*HRSSCPPPPGP
Trigger: AGGACCAGGCGGCGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS TCA 72 bp GTTCATCTCCTGTCAGTTCACCCTGGAGAGTCAGCCTaGGAATGTCCACGCTGCCCGCCGCCTGGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VHLLSVHPGESA*ECPRCPPPGPL
Trigger: CAGAGGACCAGGCGGCGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGATGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 72 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PVLKPENDQLSG*TPWHRSSCPPP
Trigger: CGGCGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000392712.7
CDS CCA 72 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PVLKPENDQLSG*TPWHRSSCPPG
Trigger: GCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS TCA 72 bp GTACCGGCTGAGTGTGACCTCAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGCCTCCTGAAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: VPAECDLKSHTV*LVLPLGLLKLG
Trigger: GCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTTGAGGTCACACTCAGCCGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
ENST00000490156.1
CDS GCA 72 bp CAGCTGAGTGGCTGGACACCATGGCATAGGTCTTCCTaGCCGCCTGGCCAAAGAGAGATGAGAGAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: QLSGWTPWHRSS*PPGQREMRERE
Trigger: CTCTCTCTCTCTCATCTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CCA 72 bp AGTCTGACTGGTGTTGCCGCTTGGCCTCCTGAAGCTTaGCCAGCAAGTCCTGCACCGTCTTCCTCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SLTGVAAWPPEA*PASPAPSSSSS
Trigger: AGAGCTTGAGGAAGACGGTGCAGGACTTGCTGGCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGTCAGACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
ENST00000490156.1
ENST00000498606.5
CDS CCA 72 bp AAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCTGGCCAAAGAGAG +
Preference number: 6 (lower is better)
Translates to: KPENDQLSGWTP*HRSSCPPGQRE
Trigger: CTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CAA 90 bp TTCTGGAGCTGCTCTATCATTTGCCGGACTTTCCGCTGCTGGCTCTaGAGCATGTCATCCAAGTGGTGGATCTTCTCCCGCAACCCGGCC +
Preference number: 6 (lower is better)
Translates to: FWSCSIICRTFRCWL*SMSSKWWIFSRNPA
Trigger: GGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 72 bp AAGCCAGAGAATGACCAGCTGAGTGGCTGGACACCATaGCATAGGTCTTCCTGCCCGCCTTCTGGGCTATGT +
Preference number: 6 (lower is better)
Translates to: KPENDQLSGWTP*HRSSCPPSGLC
Trigger: ACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 72 bp CCAGTTCTGAAGCCAGAGAATGACCAGCTGAGTGGCTaGACACCATGGCATAGGTCTTCCTGCCCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PVLKPENDQLSG*TPWHRSSCPPS
Trigger: AGAAGGCGGGCAGGAAGACCTATGCCATGGTGTCCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 72 bp TTCCGCTGCTGGCTCTTGAGCATGTCATCCAAGTGGTaGATCTTCTCCCGCAACCCGGCCACTTCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: FRCWLLSMSSKW*IFSRNPATSFS
Trigger: GGAAAAGGAAGTGGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CAA 72 bp ACTCGGATGACAGGCATGGGCTTCGGGCTAGGCGGCTaGGATATCCTAATACTGCCCGGGTTCTCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: TRMTGMGFGLGG*DILILPGFSVL
Trigger: CAAGACAGAGAACCCGGGCAGTATTAGGATATCCAAGCCGCCTAGCCCGAAGCCCATGCCTGTCATCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 72 bp GGCATAGGTCTTCCTGCCCGCCTGGCCAAAGAGAGATaGGAGAGAGAGAGAGAGAGAGAGATGGCTCAGACA +
Preference number: 6 (lower is better)
Translates to: GIGLPARLAKER*EREREREMAQT
Trigger: TGTCTGAGCCATCTCTCTCTCTCTCTCTCTCTCTCATCTCTCTTTGGCCAGGCGGGCAGGAAGACCTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CCA 72 bp GCTATGTGTTCAAGTTCATCTCCTGTCAGTTCACCCTaGAGAGTCAGCCTGAGAATGTCCACGCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: AMCSSSSPVSSP*RVSLRMSTLPA
Trigger: GGCGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGATGAACTTGAACACATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368849.8
ENST00000498606.5
CDS CCA 72 bp ACTTTCCGCTGCTGGCTCTTGAGCATGTCATCCAAGTaGTGGATCTTCTCCCGCAACCCGGCCACTTCCTTT +
Preference number: 6 (lower is better)
Translates to: TFRCWLLSMSSK*WIFSRNPATSF
Trigger: AAAGGAAGTGGCCGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 72 bp TGGCACAACCCCACCTCCTCGGTGGGGACCCAACCATaGACCATTTCCTATTACCTGTATCTCCTGTCGATG +
Preference number: 6 (lower is better)
Translates to: WHNPTSSVGTQP*TISYYLYLLSM
Trigger: CATCGACAGGAGATACAGGTAATAGGAAATGGTCCATGGTTGGGTCCCCACCGAGGAGGTGGGGTTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS CAA 72 bp GTAGCAGCCTTTTCTCGTTCTGCTTGGCAGTCAGCATaGTTGCTCCGAAGTTCCTCTAGGGCCACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: VAAFSRSAWQSA*LLRSSSRATSP
Trigger: AGGGGAGGTGGCCCTAGAGGAACTTCGGAGCAACAATGCTGACTGCCAAGCAGAACGAGAAAAGGCTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 72 bp GCTCTATCATTTGCCGGACTTTCCGCTGCTGGCTCTTaGGCATGTCATCCAAGTGGTGGATCTTCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: ALSFAGLSAAGS*ACHPSGGSSPA
Trigger: TGCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 72 bp CCAAATCCCAAATCTCACCTCAAAAGCCACACAGTCTaGCTGGTGTTGCCGCTTGGCCTCCTGAAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: PNPKSHLKSHTV*LVLPLGLLKLG
Trigger: GCCAAGCTTCAGGAGGCCAAGCGGCAACACCAGTCAGACTGTGTGGCTTTTGAGGTGAGATTTGGGATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498606.5
CDS CAA 72 bp TGCTCTATCATTTGCCGGACTTTCCGCTGCTGGCTCTaGAGCATGTCATCCAAGTGGTGGATCTTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: CSIICRTFRCWL*SMSSKWWIFSR
Trigger: GCGGGAGAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 72 bp TCTGTCTTGGCCCGGGCCTGGGTGCTGAAGTTGCCATaGCTGATTTGTTTTTCTATCAGGTGTTCCATCCGG +
Preference number: 6 (lower is better)
Translates to: SVLARAWVLKLP*LICFSIRCSIR
Trigger: CCGGATGGAACACCTGATAGAAAAACAAATCAGTCATGGCAACTTCAGCACCCAGGCCCGGGCCAAGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS TCA 72 bp GATGCTAGATTTAGCACACACTGGGTAATTGGTAAATaGGACTGCCTGGCACAACCCCACCTCCTCGGTGGG +
Preference number: 6 (lower is better)
Translates to: DARFSTHWVIGK*DCLAQPHLLGG
Trigger: CCCACCGAGGAGGTGGGGTTGTGCCAGGCAGTCTCATTTACCAATTACCCAGTGTGTGCTAAATCTAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461859.1
CDS GCA 72 bp TTCTGGAGCTGCTCTATCATTTGCCGGACTTTCCGCTaGTGGCTCTTGAGCATGTCATCCAAGTGGTGGATC +
Preference number: 6 (lower is better)
Translates to: FWSCSIICRTFR*WLLSMSSKWWI
Trigger: GATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 72 bp TGGAGCTGCTCTATCATTTGCCGGACTTTCCGCTGCTaGCTCTTGAGCATGTCATCCAAGTGGTGGATCTTC +
Preference number: 6 (lower is better)
Translates to: WSCSIICRTFRC*LLSMSSKWWIF
Trigger: GAAGATCCACCACTTGGATGACATGCTCAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CAA 72 bp GGCCCGGGCCTGGGTGCTGAAGTTGCCATGACTGATTaGTTTTTCTATCAGGTGTTCCATCCGGTCATGCAT +
Preference number: 6 (lower is better)
Translates to: GPGLGAEVAMTD*FFYQVFHPVMH
Trigger: ATGCATGACCGGATGGAACACCTGATAGAAAAACAAATCAGTCATGGCAACTTCAGCACCCAGGCCCGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CAA 90 bp TTTCTGCTCCACTCTGTCCTCCTCTCTCTGAAGGGCCACATTACTTaGTTCTGCTTCCCTCTGGTACCGGCTGAGTGTGACCTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: FLLHSVLLSLKGHIT*FCFPLVPAECDLKS
Trigger: GCTTTTGAGGTCACACTCAGCCGGTACCAGAGGGAAGCAGAACAAAGTAATGTGGCCCTTCAGAGAGAGGAGGACAGAGTGGAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
ENST00000490156.1
CDS CAA 90 bp TGTATCTCCTGTCGATGGAGAGAATCTCCTAGGTTCCTGTCAAGCTaGCTACTTATATCCTCCCGGAGCTTCTGTAGGCAGTTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: CISCRWRESPRFLSS*LLISSRSFCRQFLA
Trigger: GGCCAGGAACTGCCTACAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGACAGGAGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000461859.1
ENST00000498606.5
CDS TCA 72 bp CTAAATTCTCTGCCTCCAGATAGGCGATTTTCTCCTTaGGCTCCTGGATGGTGGCGTCCTTTGACTGGATCA +
Preference number: 6 (lower is better)
Translates to: LNSLPPDRRFSP*APGWWRPLTGS
Trigger: TGATCCAGTCAAAGGACGCCACCATCCAGGAGCTCAAGGAGAAAATCGCCTATCTGGAGGCAGAGAATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS GCA 72 bp GTCGATGGAGAGAATCTCCTAGGTTCCTGTCAAGCTTaGTACTTATATCCTCCCGGAGCTTCTGTAGGCAGT +
Preference number: 6 (lower is better)
Translates to: VDGENLLGSCQA*YLYPPGASVGS
Trigger: ACTGCCTACAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000461859.1
ENST00000498606.5
CDS CCA 72 bp TTCTCCTTGAGCTCCTGGATGGTGGCGTCCTTTGACTaGATCACAGCTTTTGAATTCTGGAGCTGCTCTATC +
Preference number: 6 (lower is better)
Translates to: FSLSSWMVASFD*ITAFEFWSCSI
Trigger: GATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGTCAAAGGACGCCACCATCCAGGAGCTCAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CAA 72 bp TGTCGATGGAGAGAATCTCCTAGGTTCCTGTCAAGCTaGCTACTTATATCCTCCCGGAGCTTCTGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: CRWRESPRFLSS*LLISSRSFCRQ
Trigger: CTGCCTACAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000461859.1
ENST00000498606.5
CDS CAA 72 bp CCTGGATGGTGGCGTCCTTTGACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTATCATTTGCCGGACTT +
Preference number: 6 (lower is better)
Translates to: PGWWRPLTGSQL*NSGAALSFAGL
Trigger: AAGTCCGGCAAATGATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGTCAAAGGACGCCACCATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368848.6
ENST00000368849.8
ENST00000392712.7
CDS CCA 72 bp TTTGGCTTTTCTAGCACCACCTGTATCTCCTGTCGATaGAGAGAATCTCCTAGGTTCCTGTCAAGCTTGCTA +
Preference number: 6 (lower is better)
Translates to: FGFSSTTCISCR*RESPRFLSSLL
Trigger: TAGCAAGCTTGACAGGAACCTAGGAGATTCTCTCCATCGACAGGAGATACAGGTGGTGCTAGAAAAGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353024.4
ENST00000368848.6
ENST00000368849.8
ENST00000498606.5