RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUBGCP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000137822

Ensembl transcript IDs: ENST00000260383.11, ENST00000561691.5, ENST00000562053.1, ENST00000563147.5, ENST00000563412.1, ENST00000563517.5, ENST00000563963.1, ENST00000564079.6, ENST00000564511.1, ENST00000565548.1, ENST00000566251.1, ENST00000570081.1

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGGTGACGGACCCCTCATGCCCAGCCTCGGTGCTGAAGTGTGCTaGAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTGGGTGATCCA +
Preference number: 1 (lower is better)
Translates to: GGDGPLMPSLGAEVC*SIAAACGVTRVGDP
Trigger: TGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 90 bp CGCCACTTGATTGCATCAGTCTGGTTCGACTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGG +
Preference number: 1 (lower is better)
Translates to: RHLIASVWFDLRCLR*ICRAQQCCSSACTR
Trigger: CCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 90 bp TGGTTCGACTTGAGGTGCTTGCGCTGCATTTGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACCCGGCGCACACTCAGTAAGTACTTA +
Preference number: 1 (lower is better)
Translates to: WFDLRCLRCICRAQQ*CSSACTRRTLSKYL
Trigger: TAAGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 90 bp CAAGCAGTGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGATTCCATGTAACCCACCTTGGCCCT +
Preference number: 1 (lower is better)
Translates to: QAVLGDKAAKQNPAL*RRPAGRFHVTHLGP
Trigger: AGGGCCAAGGTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR GCA 90 bp TTCGACTTGAGGTGCTTGCGCTGCATTTGTAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGGCGCACACTCAGTAAGTACTTAAAA +
Preference number: 1 (lower is better)
Translates to: FDLRCLRCICRAQQC*SSACTRRTLSKYLK
Trigger: TTTTAAGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 90 bp TTTCTTAGGCGCCACTTGATTGCATCAGTCTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCT +
Preference number: 1 (lower is better)
Translates to: FLRRHLIASVWFDLR*LRCICRAQQCCSSA
Trigger: AGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 90 bp GATATTGCTTTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATaGCCAGCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCT +
Preference number: 1 (lower is better)
Translates to: DIALGVFDVVVTDPS*PASVLKCAEALQLP
Trigger: AGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAAAGCAATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp TCAGCTGGGCGGCTCCACGCTCATCCAGTGGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGTGACAGAGATCTAGGATTTCATTCA +
Preference number: 1 (lower is better)
Translates to: SAGRLHAHPVGLGSD*PANKNCDRDLGFHS
Trigger: TGAATGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR TCA 90 bp AGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTGGGTaGTCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGC +
Preference number: 1 (lower is better)
Translates to: SVLKHCSCLWCHKSG*SSASLLGRELDSSS
Trigger: GCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp TCTTCACTTTCCCTTGCTCCTTGCAGATATTGCTTTAGGGGTATTTaGTGTGGTGGTGACGGACCCCTCATGCCCAGCCTCGGTGCTGAA +
Preference number: 1 (lower is better)
Translates to: SSLSLAPCRYCFRGI*CGGDGPLMPSLGAE
Trigger: TTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAAAGCAATATCTGCAAGGAGCAAGGGAAAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 90 bp TGCTTGCGCTGCATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGTAAGTACTTAAAAACAACATTGTAC +
Preference number: 1 (lower is better)
Translates to: CLRCICRAQQCCSSA*TRRTLSKYLKTTLY
Trigger: GTACAATGTTGTTTTTAAGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CCA 90 bp CTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTaGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAG +
Preference number: 1 (lower is better)
Translates to: LKCAEALQLPVVSQE*VIQCLIVGERIGFK
Trigger: CTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp TGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTaGTCCCTGCATGGCTTCTCATTCTCTAAAGCAGGGGTCAACAAG +
Preference number: 1 (lower is better)
Translates to: CHNSWKQFLPFLWHH*SLHGFSFSKAGVNK
Trigger: CTTGTTGACCCCTGCTTTAGAGAATGAGAAGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp CCTGTCTCCTTCATAGGCAACCCCGTGAAAATCCTTTCCAGAATCTaGAGGTACTCTTGGTATCAGACCAACAGCAGAACTTCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: PVSFIGNPVKILSRI*RYSWYQTNSRTSWS
Trigger: GCTCCAGGAAGTTCTGCTGTTGGTCTGATACCAAGAGTACCTTCAGATTCTGGAAAGGATTTTCACGGGGTTGCCTATGAAGGAGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp TATGGCTGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTaGCTCTGCTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTC +
Preference number: 1 (lower is better)
Translates to: YGCCLGAFHRSHQTH*LCFFSCSVTQLTSV
Trigger: GACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp ATTATCTGTTGCCAGCTGGGTACAGCCTTGAGGAGCAAAGAATTCTaGACTGGTAAGTATTTGAAGCCCATCCAGAATTGTATAGGCAGG +
Preference number: 1 (lower is better)
Translates to: IICCQLGTALRSKEF*TGKYLKPIQNCIGR
Trigger: CCTGCCTATACAATTCTGGATGGGCTTCAAATACTTACCAGTCCAGAATTCTTTGCTCCTCAAGGCTGTACCCAGCTGGCAACAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp TTTGAAGCCCATCCAGAATTGTATAGGCAGGAGGACAGCAAGCTTTaGAGGGAAGAGAATCTAGGTGAGAGAGTAAAGCTTTCTAGAAAT +
Preference number: 1 (lower is better)
Translates to: FEAHPELYRQEDSKL*REENLGERVKLSRN
Trigger: ATTTCTAGAAAGCTTTACTCTCTCACCTAGATTCTCTTCCCTCCAAAGCTTGCTGTCCTCCTGCCTATACAATTCTGGATGGGCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp AGTCCTATCACTAAGCCGCAGATATTTATTTGTGTGTGGCTAGAATaGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: SPITKPQIFICVWLE*DVLNLLLQPWERGC
Trigger: ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATCTGCGGCTTAGTGATAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
3UTR GCA 90 bp GTGATGAAAACCAGATGCAGTGACTATAACCTGATGCCAGAACACTaGATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCT +
Preference number: 1 (lower is better)
Translates to: VMKTRCSDYNLMPEH*ILFQFGGRCSVNIS
Trigger: AGAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGCATCAGGTTATAGTCACTGCATCTGGTTTTCATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp CCTTTGGTCATGATCAGTAGCAGTGTGTTTGACATAATAGGGCTTTaGTTTGTGCAGAGTGGGATGTATTGGTTAGAATCAAATCTCTCT +
Preference number: 1 (lower is better)
Translates to: PLVMISSSVFDIIGL*FVQSGMYWLESNLS
Trigger: AGAGAGATTTGATTCTAACCAATACATCCCACTCTGCACAAACCAAAGCCCTATTATGTCAAACACACTGCTACTGATCATGACCAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp GGGTTAGTTAATGGCTATGGTTCTGTTGCTGGGACAAAAGAAGATTaGTGTTTATGTTTAGTAGTAGAAACCCCTATTAGGGTTGCTGAT +
Preference number: 1 (lower is better)
Translates to: GLVNGYGSVAGTKED*CLCLVVETPIRVAD
Trigger: ATCAGCAACCCTAATAGGGGTTTCTACTACTAAACATAAACATCAATCTTCTTTTGTCCCAGCAACAGAACCATAGCCATTAACTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTaGCTGTTATTTCAATTTATGAGCCAGAAATTTTCACATCCCGAA +
Preference number: 1 (lower is better)
Translates to: ARMGCFESSVTTLGT*LLFQFMSQKFSHPE
Trigger: TTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
3UTR CCA 90 bp TGGAGGGAAGAGAATCTAGGTGAGAGAGTAAAGCTTTCTAGAAATTaGAATGTCTGTGGGATAAATTTGAGTGGGTTTGAAATGACTTCA +
Preference number: 1 (lower is better)
Translates to: WREENLGERVKLSRN*NVCGINLSGFEMTS
Trigger: TGAAGTCATTTCAAACCCACTCAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAGATTCTCTTCCCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp CCGTATCCATGTTTCTTAGAGAAGAAAAGTACCACCTTCAAGAGGTaGGTCAACATAAGTGAAGCACTGGACGTATATTTGTTAAATATT +
Preference number: 1 (lower is better)
Translates to: PYPCFLEKKSTTFKR*VNISEALDVYLLNI
Trigger: AATATTTAACAAATATACGTCCAGTGCTTCACTTATGTTGACTCACCTCTTGAAGGTGGTACTTTTCTTCTCTAAGAAACATGGATACGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 90 bp TGCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTaGATATTTCTTTTTACTTACACTGATATGAATATTGATTACCAG +
Preference number: 1 (lower is better)
Translates to: CQNTAFFFSLEGVVQ*IFLFTYTDMNIDYQ
Trigger: CTGGTAATCAATATTCATATCAGTGTAAGTAAAAAGAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR TCA 90 bp AGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGTGGGCCTATTCTTAGGCGCCACTTaGTTGCATCAGTCTGGTTCG +
Preference number: 2 (lower is better)
Translates to: SPSRECSAGRLHAHPVGLFLGAT*LHQSGS
Trigger: CGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAA...TAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CAA 90 bp CTTAGGCGCCACTTGATTGCATCAGTCTGGTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: LRRHLIASVWFDLRC*RCICRAQQCCSSAC
Trigger: GCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTGGCGCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR GCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTGTGACGGACCCCTCATaGCCAGCCTCGGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFVTDPS*PASVLK
Trigger: CTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCAC...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp GAGATGGGGATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: EMGITQELLFQIKQC*AIRLQNRIQPCAEG
Trigger: GCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATCCCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR-3UTR TCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGGCCACATGTTCTCCTTaGTGGGAGAGACCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRATCSP*WERPFH
Trigger: GTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGC...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp GCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 2 (lower is better)
Translates to: AAKALHENAQLGGSTLIQTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...CTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR CCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCAGCCTCCCAAGCTGCTaGGACTACAGGCACTCGCCA +
Preference number: 2 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCSLPSC*DYRHSP
Trigger: TGGCGAGTGCCTGTAGTCCCAGCAGCTTGGGAGGCT...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR TCA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTTGTCACAAGAGTGGGTaGTCCAGTGCCTCATTGTTG +
Preference number: 2 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLCHKSG*SSASLL
Trigger: CAACAATGAGGCACTGGATCACCCACTCTTGTGACA...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR GCA 90 bp CAACCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCTCTATGTCTTCTCTaGTGGTGCTCCTCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: QPSLECRMAKSPLVGKTASLCLL*WCSSGH
Trigger: GTGCCCTGAGGAGCACCAGCAGAGAAGACATAGAGA...AGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
3UTR-3UTR GCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGG +
Preference number: 2 (lower is better)
Translates to: IFCYNLGNVAVISIYEPERAQQC*SSACTR
Trigger: CCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCT...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR GCA 90 bp AACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTATGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACC +
Preference number: 2 (lower is better)
Translates to: NCPEFHQPGYSICYNLVVCRAQQ*CSSACT
Trigger: GGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACA...TACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR GCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTACTGGTTTTATTCCCTaGTATCGTGGAGATTGTGTT +
Preference number: 2 (lower is better)
Translates to: ADQHCRTRKYFLCLASGITGFIP*YRGDCV
Trigger: AACACAATCTCCACGATAGCAGGGAATAAAACCAGT...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp TCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCAGAGCTATGTCTTCTCTGCTaGTGCTCCTCAGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: SLECRMAKSPLVGKTASELCLLC*CSSGHC
Trigger: ACAGTGCCCTGAGGAGCACCAGCAGAGAAGACATAG...CTCTGAAGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
3UTR-3UTR CCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTTATTCCCTGCTATCGTaGAGATTGTGTTTTAACCAG +
Preference number: 2 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIYSLLS*RLCFNQ
Trigger: CTGGTTAAAACACAATCTCCACGATAGCAGGGAATA...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR TCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCCCTTCCACATGGGAATaGTGGGAAGGAGTTGTACTC +
Preference number: 2 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCPSTWE*WEGVVL
Trigger: GAGTACAACTCCTTCCCATCATTCCCATGTGGAAGG...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR GCA 90 bp GATGCTTTCAAAGTCTCGGGTAGAATTGATCTGATGAAGCAGCTGGGAGAACTGTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGG +
Preference number: 2 (lower is better)
Translates to: DAFKVSGRIDLMKQLGELWFDLR*LRCICR
Trigger: CCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA...CAGTTCTCCCAGCTGCTTCATCAGATCAATTCTACCCGAGACTTTGAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CAA 90 bp CCTGTAGGTGTTAGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTaGACCGTATCCATGTTTCTTAGAGAAGAAAAGTACCACCTTCAA +
Preference number: 2 (lower is better)
Translates to: PVGVRPCGPRLRPNR*TVSMFLREEKYHLQ
Trigger: TTGAAGGTGGTACTTTTCTTCTCTAAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCTAACACCTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp CTGGGTACAGCCTTGAGGAGCAAAGAATTCTGGACTGGTAAGTATTaGAAGCCCATCCAGAATTGTATAGGCAGGAGGACAGCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: LGTALRSKEFWTGKY*KPIQNCIGRRTASF
Trigger: AAAGCTTGCTGTCCTCCTGCCTATACAATTCTGGATGGGCTTCAAATACTTACCAGTCCAGAATTCTTTGCTCCTCAAGGCTGTACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp AGCTCCAGAACTACCGTAATTATCTGTTGCCAGCTGGGTACAGCCTaGAGGAGCAAAGAATTCTGGACTGGTAAGTATTTGAAGCCCATC +
Preference number: 2 (lower is better)
Translates to: SSRTTVIICCQLGTA*RSKEFWTGKYLKPI
Trigger: GATGGGCTTCAAATACTTACCAGTCCAGAATTCTTTGCTCCTCAAGGCTGTACCCAGCTGGCAACAGATAATTACGGTAGTTCTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp TTATGGCTGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATaGGCTCTGCTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGT +
Preference number: 2 (lower is better)
Translates to: LWLLLRSFPQKSPNP*ALLLFLQCNTAYQC
Trigger: ACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCAGCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCAACTTCCTGGAGCTCTaGTCTGAGATCCTCATGACT +
Preference number: 2 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCNFLEL*SEILMT
Trigger: AGTCATGAGGATCTCAGACCAGAGCTCCAGGAAGTT...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp AGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTaGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAG +
Preference number: 2 (lower is better)
Translates to: SFPQKSPNPLALLLF*QCNTAYQCLLIADQ
Trigger: CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR TCA 90 bp AACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: NCPEFHQPGYSICYNLVVNLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...TACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR GCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNLRCLR*ICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR GCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGTTCTTCACTTTCCCTTaGTCCTTGCAGATATTGCTT +
Preference number: 2 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRFFTFP*SLQILL
Trigger: AAGCAATATCTGCAAGGAGCAAGGGAAAGTGAAGAA...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR TCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTAATATTGATTACCAGTaGTGGCTGGGCCATATTAAG +
Preference number: 2 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFNIDYQ*WLGHIK
Trigger: CTTAATATGGCCCAGCCATCACTGGTAATCAATATT...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 2 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR TCA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 2 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
3UTR-3UTR TCA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCACTCTGCCTTTGGTCATaGTCAGTAGCAGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSLCLWS*SVAVCL
Trigger: CAAACACACTGCTACTGATCATGACCAAAGGCAGAG...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 2 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR CCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTGATTGCATCAGTCTaGTTCGACTTGAGGTGCTTG +
Preference number: 2 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLLIASV*FDLRCL
Trigger: CAAGCACCTCAAGTCGAACCAGACTGATGCAATCAA...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR TCA 90 bp TGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAACAAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: CPEFHQPGYSICYNLVVTNRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...TGTTACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR-3UTR TCA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCACATGGGAAGCACAAGTaGGAACACCTGGAAATGTTA +
Preference number: 2 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSHGKHK*EHLEML
Trigger: TAACATTTCCAGGTGTTCTCACTTGTGCTTCCCATG...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCAAGGAGTTGTACTCCTaGATGTTCAGTAACTGCTTC +
Preference number: 2 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFKELYS*MFSNCF
Trigger: GAAGCAGTTACTGAACATCCAGGAGTACAACTCCTT...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp ACTTTCTGCTCTATATTGTTTGTTTACCGCTGTATCTCCCACAGCTaGAACAGTACCAAGGTACGTAGTAGGTGCTCAATAAATGACTAT +
Preference number: 2 (lower is better)
Translates to: TFCSILFVYRCISHS*NSTKVRSRCSINDY
Trigger: ATAGTCATTTATTGAGCACCTACTACGTACCTTGGTACTGTTCAAGCTGTGGGAGATACAGCGGTAAACAAACAATATAGAGCAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
3UTR-3UTR TCA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGAATGGAGGGCTAAGTTaGGTGTCCTTTCCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: LGERVKLSRNWNVCGINLNGGLS*VSFPSS
Trigger: TGAAGAAGGAAAGGACACTCAACTTAGCCCTCCATT...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 90 bp ACTAAGCCGCAGATATTTATTTGTGTGTGGCTAGAATGGGATGTTTaGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAAT +
Preference number: 2 (lower is better)
Translates to: TKPQIFICVWLEWDV*NLLLQPWERGCYFN
Trigger: ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATCTGCGGCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR CCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 2 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR CCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTTATTGTCACAATAGCTaGAAGCAGTTCCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: IFESIQMYMSPFAERQFVYCHNS*KQFLPF
Trigger: GAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATA...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR GCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTATGGGTAATTGGGCCTaGAATCTTCAGTATTTAAAA +
Preference number: 2 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIIMGNWA*NLQYLK
Trigger: TTTTAAATACTGAAGATTGCAGGCCCAATTACCCAT...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp AGGTGCTTGCGCTGCATTTGTAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGGCGCACACTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: RCLRCICRAQQC*SSACTRRTLSK
Trigger: CTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 72 bp TTGAGGTGCTTGCGCTGCATTTGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACCCGGCGCACACTCAGT +
Preference number: 3 (lower is better)
Translates to: LRCLRCICRAQQ*CSSACTRRTLS
Trigger: ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR TCA 72 bp GGACCCCTCATGCCCAGCCTCGGTGCTGAAGTGTGCTaGAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTG +
Preference number: 3 (lower is better)
Translates to: GPLMPSLGAEVC*SIAAACGVTRV
Trigger: CACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp CGCCACTTGATTGCATCAGTCTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGGGCCCAGCAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: RHLIASVWFDLR*LRCICRAQQCC
Trigger: GCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 72 bp ATTGCATCAGTCTGGTTCGACTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: IASVWFDLRCLR*ICRAQQCCSSA
Trigger: AGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 72 bp TTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATaGCCAGCCTCGGTGCTGAAGTGTGCTGAAGCATTG +
Preference number: 3 (lower is better)
Translates to: LGVFDVVVTDPS*PASVLKCAEAL
Trigger: CAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp CGGCTCCACGCTCATCCAGTGGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGTGACAGAGATCTAGGA +
Preference number: 3 (lower is better)
Translates to: RLHAHPVGLGSD*PANKNCDRDLG
Trigger: TCCTAGATCTCTGTCACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACTGGATGAGCGTGGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR TCA 72 bp TCCCTTGCTCCTTGCAGATATTGCTTTAGGGGTATTTaGTGTGGTGGTGACGGACCCCTCATGCCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: SLAPCRYCFRGI*CGGDGPLMPSL
Trigger: GAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAAAGCAATATCTGCAAGGAGCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp CTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGATTCCATGTAACCCAC +
Preference number: 3 (lower is better)
Translates to: LGDKAAKQNPAL*RRPAGRFHVTH
Trigger: GTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR GCA 72 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTaGCTTGCCAGTGGGATTCCTTGTGTGTCTCATGTC +
Preference number: 3 (lower is better)
Translates to: ADQHCRTRKYFL*LASGIPCVSHV
Trigger: GACATGAGACACACAAGGAATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp TGCCTTGCCAGTGGGATTCCTTGTGTGTCTCATGTCTaGGTCCATGATAGTTGCCATGCCAACCAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: CLASGIPCVSHV*VHDSCHANQLQ
Trigger: CTGGAGCTGGTTGGCATGGCAACTATCATGGACCCAGACATGAGACACACAAGGAATCCCACTGGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp TGCATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGTAAGTACTTAAAAACA +
Preference number: 3 (lower is better)
Translates to: CICRAQQCCSSA*TRRTLSKYLKT
Trigger: TGTTTTTAAGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CCA 72 bp CGAACACTGGAGAGAATCTTGAACAGGAGTGAAGACTaGCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RTLERILNRSED*RLKPFTRMLSW
Trigger: CCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR TCA 72 bp AAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTGGGTaGTCCAGTGCCTCATTGTTGGGGAGAGAATTGGAT +
Preference number: 3 (lower is better)
Translates to: KHCSCLWCHKSG*SSASLLGRELD
Trigger: ATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp GTTTTCCAGGTCTTCTCTCTATGTCTTCTCTGCTGGTaGTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: VFQVFSLCLLCW*SSGHCPRLSFP
Trigger: AGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGAGAAGACATAGAGAGAAGACCTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
3UTR GCA 72 bp GGGATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTaGTTGGCGATAAGGCTGCAAAACAGAATCCAGCCC +
Preference number: 3 (lower is better)
Translates to: GITQELLFQIKQ*LAIRLQNRIQP
Trigger: GGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR-3UTR CAA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAGTGCTGCAGCTCAGCTaGCACCCGGCGCACACTCAG +
Preference number: 3 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEVLQLS*HPAHTQ
Trigger: CTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCAC...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CCA 72 bp CTCAGTATGCTGCAGGTGAGGCAGAGAGAACATCTATaGAAATTACTTGGGCCTTCCAGTGAGAAGAGTGGC +
Preference number: 3 (lower is better)
Translates to: LSMLQVRQREHL*KLLGPSSEKSG
Trigger: GCCACTCTTCTCACTGGAAGGCCCAAGTAATTTCCATAGATGTTCTCTCTGCCTCACCTGCAGCATACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp ATGCCAACCAGCTCCAGAACTACCGTAATTATCTGTTaGCAGCTGGGTACAGCCTTGAGGAGCAAAGAATTC +
Preference number: 3 (lower is better)
Translates to: MPTSSRTTVIIC*QLGTALRSKEF
Trigger: GAATTCTTTGCTCCTCAAGGCTGTACCCAGCTGGCAACAGATAATTACGGTAGTTCTGGAGCTGGTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp TTTGTTTTCCAGGTCTTCTCTCTATGTCTTCTCTGCTaGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: FVFQVFSLCLLC*CSSGHCPRLSF
Trigger: AAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGAGAAGACATAGAGAGAAGACCTGGAAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
3UTR-3UTR CAA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTAATGATGGGAAGGAGTaGTACTCCTGGATGTTCAGT +
Preference number: 3 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTNDGKE*YSWMFS
Trigger: ACTGAACATCCAGGAGTACAACTCCTTCCCATCATT...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp CCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCATTCCTCAATCAGGCGTaGTACGATGAAAGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: PSLECRMAKSPLVGKTASFLNQA*YDERGG
Trigger: ACCACCTCTTTCATCGTACAACGCCTGATTGAGGAA...TGAAGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
3UTR-3UTR CAA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATCAGTCTGGTTCGACTaGAGGTGCTTGCGCTGCATT +
Preference number: 3 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLSVWFD*RCLRCI
Trigger: AATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGA...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR GCA 72 bp GGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTaGTTCTTTTCTTGCAGTGTAACACAGCTTACCAGT +
Preference number: 3 (lower is better)
Translates to: GAFHRSHQTHWL*FFSCSVTQLTS
Trigger: ACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp TCTTCAGATCTGCTCTTCATGGCTCATTATGGCTGCTaGTTAGGAGCTTTCCACAGAAGTCACCAAACCCAT +
Preference number: 3 (lower is better)
Translates to: SSDLLFMAHYGC*LGAFHRSHQTH
Trigger: ATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCAGCCATAATGAGCCATGAAGAGCAGATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp GGTGTCACAAGAGTGGGTGATCCAGTGCCTCATTGTTaGGGAGAGAATTGGATTCAAGCAGCATCCAAAATA +
Preference number: 3 (lower is better)
Translates to: GVTRVGDPVPHC*GENWIQAASKI
Trigger: TATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCAAAGTGTGCTGAAGCATaGCAGCTGCCTGTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSKCAEA*QLPVVS
Trigger: TGACACCACAGGCAGCTGCAATGCTTCAGCACACTT...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTATTATAACTCTGCCTTaGGTCATGATCAGTAGCAGT +
Preference number: 3 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLIITLP*VMISSS
Trigger: ACTGCTACTGATCATGACCAAAGGCAGAGTTATAAT...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp TTAGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTaGCCGTATCCATGTTTCTTAGAGAAGAAAAGTACC +
Preference number: 3 (lower is better)
Translates to: LGLVVQGSGLIG*PYPCFLEKKST
Trigger: GGTACTTTTCTTCTCTAAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR GCA 72 bp ACCAGATGCAGTGACTATAACCTGATGCCAGAACACTaGATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: TRCSDYNLMPEH*ILFQFGGRCSV
Trigger: CACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGCATCAGGTTATAGTCACTGCATCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCGCAGAGTGGGATGTATaGGTTAGAATCAAATCTCTC +
Preference number: 3 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCAEWDV*VRIKSL
Trigger: GAGAGATTTGATTCTAACCAATACATCCCACTCTGC...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp TTCATAGGCAACCCCGTGAAAATCCTTTCCAGAATCTaGAGGTACTCTTGGTATCAGACCAACAGCAGAACT +
Preference number: 3 (lower is better)
Translates to: FIGNPVKILSRI*RYSWYQTNSRT
Trigger: AGTTCTGCTGTTGGTCTGATACCAAGAGTACCTTCAGATTCTGGAAAGGATTTTCACGGGGTTGCCTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR CAA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: LCVARMGCFESSVTTLGTAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR CCA 72 bp GATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTaGATATTACTTGTCATGCTAAGGTCCTTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: DVHESLCRKAVC*ILLVMLRSFPV
Trigger: GACAGGAAAGGACCTTAGCATGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGAGCCTATCTTACCTGTaGCTTTCTTACTTGGTGGTA +
Preference number: 3 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQSLSYL*LSYLVV
Trigger: TACCACCAAGTAAGAAAGCAACAGGTAAGATAGGCT...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGTTCAACCCCTATGGTTaGTGTAAGATGGGTAATTGG +
Preference number: 3 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQFNPYG*CKMGNW
Trigger: CCAATTACCCATCTTACACAAACCATAGGGGTTGAA...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGTGGACTGGTAAGTATTaGAAGCCCATCCAGAATTGT +
Preference number: 3 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQWTGKY*KPIQNC
Trigger: ACAATTCTGGATGGGCTTCAAATACTTACCAGTCCA...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR-3UTR CAA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
3UTR-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGTTGCAGAAAGGCAGTTaGTTGGATATTACTTGTCAT +
Preference number: 3 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQLQKGS*LDITCH
Trigger: ATGACAAGTAATATCCAACAAACTGCCTTTCTGCAA...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp ATGATCAGTAGCAGTGTGTTTGACATAATAGGGCTTTaGTTTGTGCAGAGTGGGATGTATTGGTTAGAATCA +
Preference number: 3 (lower is better)
Translates to: MISSSVFDIIGL*FVQSGMYWLES
Trigger: TGATTCTAACCAATACATCCCACTCTGCACAAACCAAAGCCCTATTATGTCAAACACACTGCTACTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp AATGGCTATGGTTCTGTTGCTGGGACAAAAGAAGATTaGTGTTTATGTTTAGTAGTAGAAACCCCTATTAGG +
Preference number: 3 (lower is better)
Translates to: NGYGSVAGTKED*CLCLVVETPIR
Trigger: CCTAATAGGGGTTTCTACTACTAAACATAAACATCAATCTTCTTTTGTCCCAGCAACAGAACCATAGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp GAGAATCTAGGTGAGAGAGTAAAGCTTTCTAGAAATTaGAATGTCTGTGGGATAAATTTGAGTGGGTTTGAA +
Preference number: 3 (lower is better)
Translates to: ENLGERVKLSRN*NVCGINLSGFE
Trigger: TTCAAACCCACTCAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAGATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp CTTTTTACTTACACTGATATGAATATTGATTACCAGTaGTGGCTGGGCCATATTAAGATAACTTCAACCCCT +
Preference number: 3 (lower is better)
Translates to: LFTYTDMNIDYQ*WLGHIKITSTP
Trigger: AGGGGTTGAAGTTATCTTAATATGGCCCAGCCATCACTGGTAATCAATATTCATATCAGTGTAAGTAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR TCA 72 bp GAAAAGTACCACCTTCAAGAGGTGAGTCAACATAAGTaGAGCACTGGACGTATATTTGTTAAATATTTCTAC +
Preference number: 3 (lower is better)
Translates to: EKYHLQEVSQHK*STGRIFVKYFY
Trigger: GTAGAAATATTTAACAAATATACGTCCAGTGCTTCACTTATGTTGACTCACCTCTTGAAGGTGGTACTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CCA 72 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTaGCTGTTATTTCAATTTATGAGCCAGAAATTTTCA +
Preference number: 3 (lower is better)
Translates to: GCFESSVTTLGT*LLFQFMSQKFS
Trigger: TGAAAATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp CTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTGGGCTCTGCGGAGACTaGGTCGCGGTCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGDKAAKQNPALCRRPAGGLCGD*VAVAAL
Trigger: GAGGGCAGCGACCGCGACTCAGTCTCCGCAGAGCCC...ACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp TTGCGCTGCATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGGCGCAAGCTGAAGAGTGGCTaGTGCTTGAGACGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRCICRAQQCCSSACTRRKLKSG*CLRRCS
Trigger: GCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTT...GCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp GGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGGCGCACACTCAGTAAGTACTGCTCAGCCACAGTGCTaGGAATGCGATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GPSSAAAQLAPGAHSVSTAQPQC*ECDPPP
Trigger: AGGTGGTGGATCGCATTCGCAGCACTGTGGCTGAGC...AGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp GATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTGGCGATAAGGCTGCAACGCGCACCGGCCCCTaGGTCGGGCGGTTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: DHPGTLVPNQAVLGDKAATRTGP*VGRFVP
Trigger: CGGCACAAACCGCCCGACCCAGGGGCCGGTGCGCGT...TGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp AAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATCACCGAGACAATCGCTaGGGCGGAGCGGACGGGAAG +
Preference number: 4 (lower is better)
Translates to: KAAKQNPALCRRPAGRFHHRDNR*GGADGK
Trigger: CTTCCCGTCCGCTCCGCCGCAGCGATTGTCTCGGTG...ATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR TCA 90 bp AGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGTGGGCCTAAGTGGGCCTAGGTTCTaGCTGACCAGCGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: SPSRECSAGRLHAHPVGLSGPRF*LTSEQK
Trigger: TTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACT...TAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp GGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGGCGCACACTCAGTAAGTACTAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GPSSAAAQLAPGAHSVSTNLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...AGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAACACCGAGACAATCGCTaGGGCGGAGCGGACGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWEHRDNR*GGADGK
Trigger: CTTCCCGTCCGCTCCGCCGCAGCGATTGTCTCGGTG...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp AGAATCTTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCGGCTGCCCAGCCAGATaGAGGGGCTTCCCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RILNRSEDWRLKPFTRMLGCPAR*RGFPGR
Trigger: TCTCCCCGGGAAGCCCCTGCATCTGGCTGGGCAGCC...GAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp TGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGCCAAGAGCAGTTCGTaGATCATTCCCACGGCGGAC +
Preference number: 4 (lower is better)
Translates to: CLAIRLQNRIQPCAEGPQAKSSS*IIPTAD
Trigger: GTCCGCCGTGGGAATGATCCACGAACTGCTCTTGGC...CTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CCA 90 bp GGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGGCGCACACTCAGTAAGTACTTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAA +
Preference number: 4 (lower is better)
Translates to: GPSSAAAQLAPGAHSVSTSSSSG*ALTLPE
Trigger: TTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGA...AGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTAGCCTCCCAAGCTGCTaGGACTACAGGCACTCGCCA +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGISLPSC*DYRHSP
Trigger: TGGCGAGTGCCTGTAGTCCCAGCAGCTTGGGAGGCT...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GCAGTGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCTCTCAGCTCAGGCCCTaGAACCTGCTGTTGCACATG +
Preference number: 4 (lower is better)
Translates to: AVLGDKAAKQNPALCRRPSQLRP*NLLLHM
Trigger: CATGTGCAACAGCAGGTTTCAGGGCCTGAGCTGAGA...GGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp CTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAAGTCCTGCGATACCTaGAGGCCACTCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGDKAAKQNPALCRRPAGKSCDT*RPLRLF
Trigger: GAACAAGCGGAGTGGCCTGCAGGTATCGCAGGACTT...ACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp GGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGAAGGAAAGGGAAGTCCTaGGATACCTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GDKAAKQNPALCRRPAGRRKGKS*DTCRPL
Trigger: GAGTGGCCTGCAGGTATCGCAGGACTTCCCTTTCCT...TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTCTGTCAGTCCCCCAATaGCCAGATCCTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGILSVPQ*PDPPRP
Trigger: AGGACGAGGAGGATCTGGGCATTGGGGGACTGACAG...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CTCTGGTCTGAGATCCTCATGACTGGTGGTGCAGCCTCTGTGAAGCAGCACCATGCTCAGCCACAGTGCTaGGAATGCGATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LWSEILMTGGAASVKQHHAQPQC*ECDPPP
Trigger: AGGTGGTGGATCGCATTCGCAGCACTGTGGCTGAGC...ATGGTGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGGATCTCAGACCAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRRAQQC*SSACTR
Trigger: CCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCT...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp AGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGTGGGCCTATGTGATATGGAGAGATaGGGATCACCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: SPSRECSAGRLHAHPVGLCDMER*GSPRNS
Trigger: AGAGTTCCTGGGTGATCCCCATCTCTCCATATCACA...TAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp CTTCTCTGCTGGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCTCTCAGCCTCCTCGTCCTCTTCTaGCTGGGCACTGACATTACC +
Preference number: 4 (lower is better)
Translates to: LLCWCSSGHCPRLSFPLSLLVLF*LGTDIT
Trigger: GGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAG...GCTGAGAGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRATRMLS*AAPRSS
Trigger: GGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGT...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGGAAGTAGTTGACATGTaGTATGGAGAGATGGGGATC +
Preference number: 4 (lower is better)
Translates to: AAKALHENAQLGGSTLIQEVVDM*YGEMGI
Trigger: GATCCCCATCTCTCCATATCACATGTCAACTACTTC...CTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGGCCCAGCCTCGGTGCTaGAGTGTGCTGAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWAQPRC*SVLKHC
Trigger: GCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGC...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp AAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATCAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KAAKQNPALCRRPAGRFHQNPAL*RRPAGR
Trigger: TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTG...ATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp GCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGTTCCAAATCAAGCAGTaGTTGGCGATAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAKALHENAQLGGSTLIQFQIKQ*LAIRLQ
Trigger: TTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAA...CTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp ATTTGTAGGGCCCAGCAGTGCTGCAGCTCAGCTTGCACCCGGCGCACACTCAGTGCCACATTCACATCATaGTCAGTTACTGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ICRAQQCCSSACTRRTLSATFTS*SVTAVG
Trigger: ACCCACTGCAGTAACTGAGCATGATGTGAATGTGGC...ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp GCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGGCGGCTCCACGCTCATCCAGTACTCGATTGTCAAGTaGAACAGAGGGAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAKALHENAQLGGSTLIQYSIVK*NRGRRL
Trigger: CAACCTTCTCCCTCTGTTGCACTTGACAATCGAGTA...CTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCGGCTGCCCAGCCAGATaGAGGGGCTTCCCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGGCPAR*RGFPGR
Trigger: TCTCCCCGGGAAGCCCCTGCATCTGGCTGGGCAGCC...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTAGAATTAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: AQEVVMSQSDAFKVSGRIRAQQC*SSACTR
Trigger: CCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCT...AATTCTACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGAGCCCTTCACGAGAATaGTCAGCTGGGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWSPSRE*SAGRLH
Trigger: GTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGACCTGAAACCTGCTGTTaGACATGGCCCGTGTACTGT +
Preference number: 4 (lower is better)
Translates to: GDKAAKQNPALCRRPAGRPETCC*TWPVYC
Trigger: ACAGTACACGGGCCATGTGCAACAGCAGGTTTCAGG...TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp AAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATTCAGGCCCTGAAACCTaGTGTTGCACATGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: KAAKQNPALCRRPAGRFHSGPET*CCTWPV
Trigger: CACGGGCCATGTGCAACAGCAGGTTTCAGGGCCTGA...ATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CCA 90 bp GTTCTACTACAACCATCACAGAGGGAAAAAGAAGCTGGAACTGGTCTAGGAAGTGAGCGGACGGGAAGCTaGGAAGGGGTCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLLQPSQREKEAGTGLGSERTGS*EGVAGE
Trigger: CTCCCCCGCGACCCCTTCCCAGCTTCCCGTCCGCTC...ACTTCCTAGACCAGTTCCAGCTTCTTTTTCCCTCTGTGATGGTTGTAGTAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWTRMLS*AAPRSS
Trigger: GGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGT...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
3UTR CAA 72 bp CACTTGATTGCATCAGTCTGGTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCCCAGCAGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLIASVWFDLRC*RCICRAQQCCS
Trigger: GCTGCAGCACTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
3UTR CAA 72 bp CTTAGGCGCCACTTGATTGCATCAGTCTGGTTCGACTaGAGGTGCTTGCGCTGCATTTGTAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRRHLIASVWFD*RCLRCICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGATGCAATCAAGTGGCGCCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp AAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATGTAACCCACTCCGCTTGTTCCAGGTaGAAATGGACCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: KQNPALCRRPAGRFHVTHSACSR*KWTQGT
Trigger: GGTACCCTGGGTCCATTTTCACCTGGAACAAGCGGA...GTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR TCA 90 bp CACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGCTCAACCTCCCAGGCTaGAGTGATCCCCCTACCTCA +
Preference number: 4 (lower is better)
Translates to: HMFSLMGETLPHGNDGKELNLPG*SDPPTS
Trigger: TGAGGTAGGGGGATCACTTCAGCCTGGGAGGTTGAG...CTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCACCGAGACAATCGCTaGGGCGGAGCGGACGGGAAG +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLHRDNR*GGADGK
Trigger: CTTCCCGTCCGCTCCGCCGCAGCGATTGTCTCGGTG...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp TGTGATATGGAGAGATGGGGATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTCGACCACGAGGGGAGTaGTTCCCCTTCCACACGCGC +
Preference number: 4 (lower is better)
Translates to: CDMERWGSPRNSCSKSSSRPRGE*FPFHTR
Trigger: GCGCGTGTGGAAGGGGAAGCACTCCCCTCGTGGTCG...ACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATCCCCATCTCTCCATATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTCGACCACGAGGGGAGTaGTTCCCCTTCCACACGCGC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASRPRGE*FPFHTR
Trigger: GCGCGTGTGGAAGGGGAAGCACTCCCCTCGTGGTCG...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp TCTGCTGGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCTCTCAGCCTACCTGCTTCAGAGATGGTaGCAGCATGTTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAGAPQGTVPDCLFLSAYLLQRW*QHVLFL
Trigger: GAGGAAGAGAACATGCTGGCACCATCTCTGAAGCAG...GTAGGCTGAGAGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR GCA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTTGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTCCSSA*TRRTLS
Trigger: ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCA...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAAAGCCCTTCACGAGAATaGTCAGCTGGGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPVGTPQLLELKGERKDQSPSRE*SAGRLH
Trigger: GTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR GCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTCGGAAGTACTTCCTGTaGCTTGCCAGTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIRKYFL*LASGIP
Trigger: AGGAATCCCACTGGCAAGGCACAGGAAGTACTTCCG...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAAGCCAAGAGCAGTTCGTaGATCATTCCCACGGCGGAC +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWEAKSSS*IIPTAD
Trigger: GTCCGCCGTGGGAATGATCCACGAACTGCTCTTGGC...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp AAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATGTAACCCACGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KQNPALCRRPAGRFHVTHVDSGH*SHWGGG
Trigger: TCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGAC...GTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR TCA 90 bp TCTGCTGGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCTCTCAGCCTACATGGAGCATCCAGGCTaGGAGCTGTTTATACATGAC +
Preference number: 4 (lower is better)
Translates to: SAGAPQGTVPDCLFLSAYMEHPG*ELFIHD
Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTCCAT...GTAGGCTGAGAGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR TCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAAGGCCCTTCTCTTGCCTaGGTAGCATCTTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWEGPSLA*VASLCS
Trigger: GGAGCACAAAGATGCTACTCAGGCAAGAGAAGGGCC...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGCTGGTCTCAAACTCCTaGCTTCAGGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRLVSNS*LQVIRP
Trigger: CGGGCGGATCACCTGAAGTCAGGAGTTTGAGACCAG...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTCGACCACGAGGGGAGTaGTTCCCCTTCCACACGCGC +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCRPRGE*FPFHTR
Trigger: GCGCGTGTGGAAGGGGAAGCACTCCCCTCGTGGTCG...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATGGCTGCCCAGCCAGATaGAGGGGCTTCCCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYGCPAR*RGFPGR
Trigger: TCTCCCCGGGAAGCCCCTGCATCTGGCTGGGCAGCC...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCGTGACGGACCCCTCATaGCCAGCCTCGGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCVTDPS*PASVLK
Trigger: CTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCAC...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGCCTCATGACTGGTGGTaGAGCCTCTGTGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWPHDWW*SLCEAA
Trigger: TGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGG...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATACGCGCACCGGCCCCTaGGTCGGGCGGTTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNTRTGP*VGRFVP
Trigger: CGGCACAAACCGCCCGACCCAGGGGCCGGTGCGCGT...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp CACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTCCAAGAGGAGTCCATaGAGCATCCAGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HMFSLMGETLPHGNDGKESKRSP*SIQAES
Trigger: GCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGA...CTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGCACCAAGCTGAAGAGTaGCTGCTGCTTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWHQAEE*LLLETV
Trigger: CACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTG...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp ATCTTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCCACCAAGCTGAAGAGTaGCTGCTGCTTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: ILNRSEDWRLKPFTRMLSHQAEE*LLLETV
Trigger: CACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTG...GCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAACAGGAGTGAAGACTaGCGGCTAAAGCCCTTCACG +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRANRSED*RLKPFT
Trigger: CGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTT...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTCTCAGGAAGTGGTCATaGGCCAATCGGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRALRKWS*ANRMLS
Trigger: TGAAAGCATCCGATTGGCTCATGACCACTTCCTGAG...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAGTGGGCCTAGGTTCTaGCTGACCAGCGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRASGPRF*LTSEQK
Trigger: TTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACT...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR GCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCGGGTCGGGCGGTTTGTaGCGAATCAACCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGGSGGL*RINPPR
Trigger: TCTCGGTGGGTTGATTCGGCACAAACCGCCCGACCC...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp CAACCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTCTGTCAGTCCCCCAATaGCCAGATCCTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QPSLECRMAKSPLVGKTALSVPQ*PDPPRP
Trigger: AGGACGAGGAGGATCTGGGCATTGGGGGACTGACAG...AGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR GCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGCTGAAGAGTGGCTGCTaGTTGAGACGGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRLKSGC*LRRCSS
Trigger: AGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAG...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLCCSSA*TRRTLS
Trigger: ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCA...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGAGGGCCCAGCAGTGCTaGAGCTCAGCTTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTRAQQC*SSACTR
Trigger: CCGGGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCT...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACC +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLCRAQQ*CSSACT
Trigger: GGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACA...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTTGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASCRAQQ*CSSACT
Trigger: GGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACA...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCTGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACC +
Preference number: 4 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCCRAQQ*CSSACT
Trigger: GGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACA...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp ATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTGATCCCTGCATGGCTTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IAGSSSFPSSGITDPCMAWFDLR*LRCICR
Trigger: CCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA...AGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CAACCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTCTTCTGGCTGGGCACTaGCATTACCAGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: QPSLECRMAKSPLVGKTALLAGH*HYQKMA
Trigger: GGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAG...AGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR TCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTGTTTTCAACATGTGTTaGGCTGTGTCAATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIVFNMC*AVSMKA
Trigger: GGCCTTCATTGACACAGCTCAACACATGTTGAAAAC...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGTTCTTAGGCGCCACTTaGTTGCATCAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWFLGAT*LHQSGS
Trigger: CGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAA...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CTCTGGTCTGAGATCCTCATGACTGGTGGTGCAGCCTCTGTGAAGCAGCACCATTCAATGAAGCCCAGGTaGGGAGTTTCTTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: LWSEILMTGGAASVKQHHSMKPR*GVSLCN
Trigger: GTTACACAAAGAAACTCCTCACCTGGGCTTCATTGA...ATGGTGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGGATCTCAGACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTGGCGATAAGGCTGCAAGCGAATATAGTCTGTaGCGAGCCGGCAGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: DHPGTLVPNQAVLGDKAASEYSL*RAGRVD
Trigger: ATCGACTCTGCCGGCTCGGCACAGACTATATTCGCT...TGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCTGTCAGTCCCCCAATaGCCAGATCCTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLLSVPQ*PDPPRP
Trigger: AGGACGAGGAGGATCTGGGCATTGGGGGACTGACAG...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTGAGCGGACGGGAAGCTaGGAAGGGGTCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIIERTGS*EGVAGE
Trigger: CTCCCCCGCGACCCCTTCCCAGCTTCCCGTCCGCTC...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GTTCTACTACAACCATCACAGAGGGAAAAAGAAGCTGGAACTGGTCTAGGAAGTCGGACCTCGAGTCCCTaGTTATGTCACCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLLQPSQREKEAGTGLGSRTSSP*LCHPLL
Trigger: GAGGAGGGGGTGACATAACCAGGGACTCGAGGTCCG...ACTTCCTAGACCAGTTCCAGCTTCTTTTTCCCTCTGTGATGGTTGTAGTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGGCCAAGAGCAGTTCGTaGATCATTCCCACGGCGGAC +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLAKSSS*IIPTAD
Trigger: GTCCGCCGTGGGAATGATCCACGAACTGCTCTTGGC...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp AAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATGTAACCCACTGTGATATGGAGAGATaGGGATCACCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: KQNPALCRRPAGRFHVTHCDMER*GSPRNS
Trigger: AGAGTTCCTGGGTGATCCCCATCTCTCCATATCACA...GTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CCA 90 bp GCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTAGAATTTCCAAGAGGAGTCCATaGAGCATCCAGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: AQEVVMSQSDAFKVSGRISKRSP*SIQAES
Trigger: GCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGA...AATTCTACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp TGGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCTCTCAGCCTACACTTCAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: WCSSGHCPRLSFPLSLHFKNSSC*SKRSPW
Trigger: CCATGGACTCCTCTTGGACCAGCATGAAGAATTCTT...GAAGTGTAGGCTGAGAGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAA +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWSSSSG*ALTLPE
Trigger: TTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGA...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATCCACATTGCCCAGGCTaGTCTCGAACTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHPHCPG*SRTPRP
Trigger: GGGCCTGGGAGTTCGAGACCAGCCTGGGCAATGTGG...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGAACAGGAGTGAAGACTaGCGGCTAAAGCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWNRSED*RLKPGF
Trigger: GAAACCTGGCTTTAGCCGCCAGTCTTCACTCCTGTT...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563147.5
CDS-3UTR CCA 90 bp GGGGATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTGGCGATAAGGCTACCTGCTGTTGCACATaGCCCGTGTACTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: GDHPGTLVPNQAVLGDKATCCCT*PVYCSM
Trigger: CATTGAACAGTACACGGGCCATGTGCAACAGCAGGT...AGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR CAA 72 bp CACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATaGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HSLPVSSNCGSA*SNPEVLPVPCQ
Trigger: CTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTCCGCTTGTTCCAGGTaGAAATGGACCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLSACSR*KWTQGT
Trigger: GGTACCCTGGGTCCATTTTCACCTGGAACAAGCGGA...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACATGGAGCATCCAGGCTaGGAGCTGTTTATACATGAC +
Preference number: 4 (lower is better)
Translates to: SSPVGTPQLLELKGERKDMEHPG*ELFIHD
Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTCCAT...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CAAATTGCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTCAGTCTGGTTCGACTTaGGGTGCTTGCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: QIAQEVVMSQSDAFKVSGQSGST*GACAAF
Trigger: AAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTG...ACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGCAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAAGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: SPVGTPQLLELKGERKDQGLGSD*PANKNC
Trigger: ACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCC...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp ATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTGATCCCTGCATGGCTGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: IAGSSSFPSSGITDPCMAEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...AGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTCATGGGAAGCACAAGTaGGAACACCTGGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRAHGKHK*EHLEML
Trigger: TAACATTTCCAGGTGTTCTCACTTGTGCTTCCCATG...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGGGTGCTGAAGTGTGCTaGAGCATTGCAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLGAEVC*SIAAAC
Trigger: ACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACC...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATGCCAACTTGCTGTGTTaGGAAGAGGCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYANLLC*EEAWEG
Trigger: CCCCTCCCAGGCCTCTTCTCAACACAGCAAGTTGGC...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTCAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCQNPAL*RRPAGR
Trigger: TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTG...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp AAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATTCCATGTAACCCACTTCCAAATCAAGCAGTaGTTGGCGATAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KQNPALCRRPAGRFHVTHFQIKQ*LAIRLQ
Trigger: TTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAA...GTGGGTTACATGGAATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp TTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGATCAGGCGCAAGTCCTaGAGTTCTCTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LNRSEDWRLKPFTRMLSWIRRKS*SSLSCF
Trigger: AAAACAACTGAGAGAACTGCAGGACTTGCGCCTGAT...CCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCCTGAAGAGTGGCTGCTaGTTGAGACGGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGLKSGC*LRRCSS
Trigger: AGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAG...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GCAGCTGGGAGAACTGAGACTCCAACACATCTACCTGGAGATAGTACTGAAGATCCACAGTGCTGCGAATaGGATCCACCACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: AAGRTETPTHLPGDSTEDPQCCE*DPPPVQ
Trigger: TTGAACAGGTGGTGGATCGCATTCGCAGCACTGTGG...ATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGTCTCAGTTCTCCCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp CACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGGCCACATTCACATCATaGTCAGTTACTGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: HMFSLMGETLPHGNDGKEATFTS*SVTAVG
Trigger: ACCCACTGCAGTAACTGAGCATGATGTGAATGTGGC...CTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAATGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKCCSSA*TRRTLS
Trigger: ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCA...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAATGTAGGGCCCAGCAGTaGTGCAGCTCAGCTTGCACC +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKCRAQQ*CSSACT
Trigger: GGTGCAAGCTGAGCTGCAGCACTGCTGGGCCCTACA...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAAGCCCTTCACGAGAATaGTCAGCTGGGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLSPSRE*SAGRLH
Trigger: GTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTCCAGGGTGTCTAAAATaGTATGCTTGCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIPGCLK*YACRNS
Trigger: TGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGG...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CAGCAACCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTTCTCTATGTCTTCTCTaGTGGTGCTCCTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QQPSLECRMAKSPLVGKTSLCLL*WCSSGH
Trigger: GTGCCCTGAGGAGCACCAGCAGAGAAGACATAGAGA...AGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR GCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAGCACCTTCACGAGAATaGTCAGCTGGGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLAPSRE*SAGRLH
Trigger: GTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGTGC...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566251.1
CDS-3UTR CCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCGAGCGGACGGGAAGCTaGGAAGGGGTCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTERTGS*EGVAGE
Trigger: CTCCCCCGCGACCCCTTCCCAGCTTCCCGTCCGCTC...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGCGGACCTCGAGTCCCTaGTTATGTCACCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTRTSSP*LCHPLL
Trigger: GAGGAGGGGGTGACATAACCAGGGACTCGAGGTCCG...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACTGTGATATGGAGAGATaGGGATCACCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: SSPVGTPQLLELKGERKDCDMER*GSPRNS
Trigger: AGAGTTCCTGGGTGATCCCCATCTCTCCATATCACA...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCAGAGATGGTGTCCAAGAGGAGTCCATaGAGCATCCAGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ECRMAKSPLVGKTASEMVSKRSP*SIQAES
Trigger: GCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGA...CACCATCTCTGAAGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCTCCAAGAGGAGTCCATaGAGCATCCAGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCSKRSP*SIQAES
Trigger: GCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGA...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCCTCCTCGTCCTCTTCTaGCTGGGCACTGACATTACC +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGLLVLF*LGTDIT
Trigger: GGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAG...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTCTCCTCGTCCTCTTCTaGCTGGGCACTGACATTACC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASLLVLF*LGTDIT
Trigger: GGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAG...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTTTCAGCAACCCTCACTaGAATGTAGGATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIFSNPH*NVGWQN
Trigger: ATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAA...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTAACAGGAGTGAAGACTaGCGGCTAAAGCCCTTCACG +
Preference number: 4 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFNRSED*RLKPFT
Trigger: CGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTT...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGAACTTCCTGGAGCTCTaGTCTGAGATCCTCATGACT +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWNFLEL*SEILMT
Trigger: AGTCATGAGGATCTCAGACCAGAGCTCCAGGAAGTT...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTAACAGCAGAACTTCCTaGAGCTCTGGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLNSRTS*SSGLRS
Trigger: GGATCTCAGACCAGAGCTCCAGGAAGTTCTGCTGTT...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp ATCTTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCGTTTTCAACATGTGTTaGGCTGTGTCAATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ILNRSEDWRLKPFTRMLSVFNMC*AVSMKA
Trigger: GGCCTTCATTGACACAGCTCAACACATGTTGAAAAC...GCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp ATCTTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCTTGTGTGCTGACTGTTaGAAGGCCACATTCACATCA +
Preference number: 4 (lower is better)
Translates to: ILNRSEDWRLKPFTRMLSLCADC*KATFTS
Trigger: TGATGTGAATGTGGCCTTTCAACAGTCAGCACACAA...GCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTTTGTGCTCCTTTCCGTaGTACTCGATTGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLLCSFP*YSIVKC
Trigger: GCACTTGACAATCGAGTATCACGGAAAGGAGCACAA...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCCAGTCTGGTTCGACTTaGGGTGCTTGCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGQSGST*GACAAF
Trigger: AAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTG...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGCAGCTGGGAGAACTaGGACTCCAACACATCTACC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASSSWEN*DSNTST
Trigger: GGTAGATGTGTTGGAGTCTCAGTTCTCCCAGCTGCT...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CAAATTGCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTCTCAGGAAGTGGTCATaGGCCAATCGGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QIAQEVVMSQSDAFKVSGLRKWS*ANRMLS
Trigger: TGAAAGCATCCGATTGGCTCATGACCACTTCCTGAG...ACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGCAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFNLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTAAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: QKFSHPETAQSSTSLGIVNLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...TACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp CAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTACACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: QKFSHPETAQSSTSLGIVHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...TACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp ATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTGATCCCTGCATGGCTTTTAGCCTGAAAGGCTaGGTTCATAGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: IAGSSSFPSSGITDPCMAFSLKG*VHRFWL
Trigger: CAACCAAAACCTATGAACTCAGCCTTTCAGGCTAAA...AGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTAAGTCCTGCGATACCTaGAGGCCACTCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCKSCDT*RPLRLF
Trigger: GAACAAGCGGAGTGGCCTGCAGGTATCGCAGGACTT...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTGAGACGGTGCAGCTCTaGAGCAAAAGTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EIFTSRNCPEFHQPGYSIETVQL*SKSVFL
Trigger: CAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTC...AATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTTGCTGCTTGAGACGGTaGAGCTCTGCAGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASCCLRR*SSAAKV
Trigger: CACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCA...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATACTCGATTGTCAAGTaGAACAGAGGGAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWEYSIVK*NRGRRL
Trigger: CAACCTTCTCCCTCTGTTGCACTTGACAATCGAGTA...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp AGACTCCAACACATCTACCTGGAGATAGTACTGAAGATTATCCACCAAAAATGCTGCTGCAGCTCAGCTTaGACCCGGCGCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: RLQHIYLEIVLKIIHQKCCCSSA*TRRTLS
Trigger: ACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCA...GCATTTTTGGTGGATAATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCLRCLR*ICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCCTGAAGCATTGCAGCTaGCTGTGGTGTCACAAGAGT +
Preference number: 4 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCLKHCS*LWCHKS
Trigger: ACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAG...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTCTCAGCCTCCCAAGCTaGTGGGACTACAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVLSLPS*WDYRHS
Trigger: CGAGTGCCTGTAGTCCCAGCAGCTTGGGAGGCTGAG...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTGCTCATTATGGCTGCTaGTTAGGAGCTTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTAHYGC*LGAFHR
Trigger: TCTGTGGAAAGCTCCTAAGCAGCAGCCATAATGAGC...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTCCTTTCGGCAAGGCTaGATACTTCCAGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCSFRQG*ILPGRR
Trigger: GCGTCTGCCTGGAAGTATGCAGCCTTGCCGAAAGGA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566251.1
CDS-3UTR CCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAAAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWEKNSSC*SKRSPW
Trigger: CCATGGACTCCTCTTGGACCAGCATGAAGAATTCTT...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp TGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGGTGGTCTTTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAA +
Preference number: 4 (lower is better)
Translates to: CQHVLFLNQALYDERGGLSSSSG*ALTLPE
Trigger: TTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGA...AAGACCACCTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACGCTCAGTTACTGCAGTaGGTGGTGTTTTCAACATGT +
Preference number: 4 (lower is better)
Translates to: SSPVGTPQLLELKGERKDAQLLQ*VVFSTC
Trigger: ACATGTTGAAAACACCACCCACTGCAGTAACTGAGC...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQTRMLS*AAPRSS
Trigger: GGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTAACAGGAGTGAAGACTaGCGGCTAAAGCCCTTCACG +
Preference number: 4 (lower is better)
Translates to: EIFTSRNCPEFHQPGYSINRSED*RLKPFT
Trigger: CGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTT...AATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp ATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTGATCCCTGCATGGCTAAGGAGTTGTACTCCTaGATGTTCAGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: IAGSSSFPSSGITDPCMAKELYS*MFSNCF
Trigger: GAAGCAGTTACTGAACATCCAGGAGTACAACTCCTT...AGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTTATTGTCACAATAGCTaGAAGCAGTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRAYCHNS*KQFLPF
Trigger: GAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATA...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR CCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGGTGCCAAAAGTTGAGTaGAATTGGGCACAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRVPKVE*NWAQLC
Trigger: ACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCAC...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGCCAGTGCCTCATTGTTaGGGAGAGAATTGGATTCAA +
Preference number: 4 (lower is better)
Translates to: HMFSLMGETLPHGNDGKEPVPHC*GENWIQ
Trigger: TTGAATCCAATTCTCTCCCCAACAATGAGGCACTGG...CTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGAGTCACCAAACCCATTaGCTCTGCTTCTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWSHQTH*LCFFSC
Trigger: GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACT...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTCAGAGATGGTGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAACTATGTCTTCTCTGCTaGTGCTCCTCAGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FRDGASMFSSSIRRCTMKLCLLC*CSSGHC
Trigger: ACAGTGCCCTGAGGAGCACCAGCAGAGAAGACATAG...TTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCACCATCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp ATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTAACAGGAGTGAAGACTaGCGGCTAAAGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IFTSRNCPEFHQPGYSICNRSED*RLKPSV
Trigger: GACAGAGGGCTTTAGCCGCCAGTCTTCACTCCTGTT...ACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566251.1
3UTR CAA 72 bp ATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ITQELLFQIKQC*AIRLQNRIQPC
Trigger: ACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
3UTR CAA 72 bp CCCCGTGAAAATCCTTTCCAGAATCTGAAGGTACTCTaGGTATCAGACCAACAGCAGAACTTCCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PRENPFQNLKVL*VSDQQQNFLEL
Trigger: GAGCTCCAGGAAGTTCTGCTGTTGGTCTGATACCAAGAGTACCTTCAGATTCTGGAAAGGATTTTCACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp CATGCCAACCAGCTCCAGAACTACCGTAATTATCTGTaGCCAGCTGGGTACAGCCTTGAGGAGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: HANQLQNYRNYL*PAGYSLEEQRI
Trigger: AATTCTTTGCTCCTCAAGGCTGTACCCAGCTGGCAACAGATAATTACGGTAGTTCTGGAGCTGGTTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGGTGGTCTTAGAGCTGTTTATACATaGCCCCATGACAAACGGCCA +
Preference number: 4 (lower is better)
Translates to: CQHVLFLNQALYDERGGLRAVYT*PHDKRP
Trigger: TGGCCGTTTGTCATGGGGTCATGTATAAACAGCTCT...AAGACCACCTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR TCA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCGTTGAGCTGTGTCAATaGAGGCCTGAAACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCVELCQ*RPETVL
Trigger: GAGAACTGTTTCAGGCCTTCATTGACACAGCTCAAC...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTAGAATTTTGTGCTCCTTTCCGTaGTACTCGATTGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: AQEVVMSQSDAFKVSGRILCSFP*YSIVKC
Trigger: GCACTTGACAATCGAGTATCACGGAAAGGAGCACAA...AATTCTACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp AACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAGGCCCTTCTCTTGCCTaGGTAGCATCTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NCPEFHQPGYSICYNLVVGPSLA*VASALC
Trigger: GCACAAAGCAGATGCTACTCAGGCAAGAGAAGGGCC...TACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCTGGATTTCATTCAGGCAGTaGAACACAGGTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: LNRSEDWRLKPFTRMLSWISFRQ*NTGFNR
Trigger: CCTATTGAAACCTGTGTTTCACTGCCTGAATGAAAT...CCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp CATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: HPETAQSSTSLGIVFVIIGLGSD*PANKNC
Trigger: ACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCC...GATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLNLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAAAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWESRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SSPVGTPQLLELKGERKDSRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCAGCCACATGTTCTCCTTaGTGGGAGAGACCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSATCSP*WERPFH
Trigger: GTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGC...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATGCCACATGTTCTCCTTaGTGGGAGAGACCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYATCSP*WERPFH
Trigger: GTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGC...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTGTTTTGGTTGTCCGTTaGGGATTTAGGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTVLVVR*GFRSSV
Trigger: TACTGAGGACCTAAATCCTCAACGGACAACCAAAAC...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTTTAATTTGTTCTACTACAACCATCACAGAGGGAAAAAGAAGCTGGAACTGGGGGTCGGGCGGTTTGTaGCGAATCAACCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: LLICSTTTITEGKRSWNWGSGGL*RINPPR
Trigger: TCTCGGTGGGTTGATTCGGCACAAACCGCCCGACCC...CCAGTTCCAGCTTCTTTTTCCCTCTGTGATGGTTGTAGTAGAACAAATTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAAGGAAAGGGAAGTCCTaGGATACCTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKRKGKS*DTCRPL
Trigger: GAGTGGCCTGCAGGTATCGCAGGACTTCCCTTTCCT...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTAGCGAATATAGTCTGTaGCGAGCCGGCAGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCSEYSL*RAGRVD
Trigger: ATCGACTCTGCCGGCTCGGCACAGACTATATTCGCT...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCCAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFQNPAL*RRPAGR
Trigger: TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTG...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp ACTCCAACACATCTACCTGGAGATAGTACTGAAGATTATCCACCAAAAATGCCACTGTCAGTCCCCCAATaGCCAGATCCTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TPTHLPGDSTEDYPPKMPLSVPQ*PDPPRP
Trigger: AGGACGAGGAGGATCTGGGCATTGGGGGACTGACAG...TGGCATTTTTGGTGGATAATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATCTGAAGAGTGGCTGCTaGTTGAGACGGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYLKSGC*LRRCSS
Trigger: AGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAG...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCGATGCTCAGCCACAGTaGTGCGAATGCGATCCACCA +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFDAQPQ*CECDPP
Trigger: TGGTGGATCGCATTCGCAGCACTGTGGCTGAGCATC...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp AGCCAATCGGATGCTTTCAAAGTCTCGGGTAGAATTGATCTGATGAAGCAGCTGTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SQSDAFKVSGRIDLMKQLWFDLR*LRCICR
Trigger: CCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA...CAGCTGCTTCATCAGATCAATTCTACCCGAGACTTTGAAAGCATCCGATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTGTGATGAAAACCAGATaGAGTGACTATAACCTGATG +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRAVMKTR*SDYNLM
Trigger: CATCAGGTTATAGTCACTGCATCTGGTTTTCATCAC...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTVDSGH*SHWGGG
Trigger: TCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGAC...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp CTCTGGTCTGAGATCCTCATGACTGGTGGTGCAGCCTCTGTGAAGCAGCACCATGTGAACTTTATTCTGTaGCATCATTCCCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LWSEILMTGGAASVKQHHVNFIL*HHSQKV
Trigger: AACCTTTTGGGAATGATGCCACAGAATAAAGTTCAC...ATGGTGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGGATCTCAGACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTCTTACGGAGGACAGCTaGCCAAGGAAATTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLLTEDS*PRKLKS
Trigger: ACTTTTCAATTTCCTTGGCCAGCTGTCCTCCGTAAG...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGTCCGCTTGTTCCAGGTaGAAATGGACCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQSACSR*KWTQGT
Trigger: GGTACCCTGGGTCCATTTTCACCTGGAACAAGCGGA...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCGAAGTAGTTGACATGTaGTATGGAGAGATGGGGATC +
Preference number: 4 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCEVVDM*YGEMGI
Trigger: GATCCCCATCTCTCCATATCACATGTCAACTACTTC...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp ATCAAGCAGTGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGTCTAGGAAGTAGTTaGCATGTGATATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: IKQCLAIRLQNRIQPCAEGLGSS*HVIWRD
Trigger: ATCTCTCCATATCACATGTCAACTACTTCCTAGACC...TTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGCTTCTGGCTGGGCACTaGCATTACCAGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQLLAGH*HYQKMA
Trigger: GGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAG...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGGTGTCAATGAAGGCCTaGAACAGTTCTCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQVSMKA*NSSPRP
Trigger: GGGACGTGGAGAACTGTTTCAGGCCTTCATTGACAC...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTGTTGAGCTGTGTCAATaGAGGCCTGAAACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EIFTSRNCPEFHQPGYSIVELCQ*RPETVL
Trigger: GAGAACTGTTTCAGGCCTTCATTGACACAGCTCAAC...AATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTGTTGAGCTGTGTCAATaGAGGCCTGAAACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASVELCQ*RPETVL
Trigger: GAGAACTGTTTCAGGCCTTCATTGACACAGCTCAAC...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAGGCCCTTCTCTTGCCTaGGTAGCATCTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLGPSLA*VASALC
Trigger: GCACAAAGCAGATGCTACTCAGGCAAGAGAAGGGCC...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260383.11
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTACCAGGACAGCTGGGGTaGAGAGAATATGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLPGQLG*REYVVA
Trigger: GGCCACTACATATTCTCTTCACCCCAGCTGTCCTGG...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGACTCCAACACATCTACCTGGAGATAGTACTGAAGATTATCCACCAAAAATGCCCAGGACAGCTGGGGTaGAGAGAATATGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLQHIYLEIVLKIIHQKCPGQLG*REYVVA
Trigger: GGCCACTACATATTCTCTTCACCCCAGCTGTCCTGG...GCATTTTTGGTGGATAATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGCCAGGACAGCTGGGGTaGAGAGAATATGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQPGQLG*REYVVA
Trigger: GGCCACTACATATTCTCTTCACCCCAGCTGTCCTGG...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAACAGTCTGGTTCGACTTaGGGTGCTTGCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKQSGST*GACAAF
Trigger: AAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTG...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCCAGTCTGGTTCGACTTaGGGTGCTTGCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFQSGST*GACAAF
Trigger: AAATGCAGCGCAAGCACCTCAAGTCGAACCAGACTG...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp AGATTAACAGTTGTGCCAAAAGTTGAGTGGAATTGGGCACAGCTCTGTTTCCTGTTCTTAGGCGCCACTTaGTTGCATCAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: RLTVVPKVEWNWAQLCFLFLGAT*LHQSGS
Trigger: CGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAA...CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCACAACTGTTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCAGCTGGGAGAACTaGGACTCCAACACATCTACC +
Preference number: 4 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTSSWEN*DSNTST
Trigger: GGTAGATGTGTTGGAGTCTCAGTTCTCCCAGCTGCT...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCAGCAGCTGGGAGAACTaGGACTCCAACACATCTACC +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFSSWEN*DSNTST
Trigger: GGTAGATGTGTTGGAGTCTCAGTTCTCCCAGCTGCT...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTNRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACAGCGAACAAAAACTGTaGCAGAGATCTAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SSPVGTPQLLELKGERKDSEQKL*QRSRIS
Trigger: TGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCT...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTCACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCGCAGTGACTATAACCTaGTGCCAGAACACTGCATTC +
Preference number: 4 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCAVTIT*CQNTAF
Trigger: GAATGCAGTGTTCTGGCATCAGGTTATAGTCACTGC...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTACAGAATCCAGCCCTGTaGAGAAGGCCCGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLQNPAL*RRPAGR
Trigger: TCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTG...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCATGCTGCTTGAGACGGTaGAGCTCTGCAGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSCCLRR*SSAAKV
Trigger: CACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCA...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAGCTGAAGAGTGGCTaGTGCTTGAGACGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQKLKSG*CLRRCS
Trigger: GCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAACCACAGTGCTGCGAATaGGATCCACCACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKPQCCE*DPPPVQ
Trigger: TTGAACAGGTGGTGGATCGCATTCGCAGCACTGTGG...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGAAGGCCCTTCTCTTaGCTGAGTAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASRRPFS*LSSICF
Trigger: AAAGCAGATGCTACTCAGGCAAGAGAAGGGCCTTCT...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260383.11
CDS-3UTR GCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCWFDLR*LRCICR
Trigger: CCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTAGCCCTTCACGAGAATaGTCAGCTGGGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IFESIQMYMSPFAERQFVSPSRE*SAGRLH
Trigger: GTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGGCT...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CTCTGGTCTGAGATCCTCATGACTGGTGGTGCAGCCTCTGTGAAGCAGCACCATATGGGTAATTGGGCCTaGAATCTTCAGTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: LWSEILMTGGAASVKQHHMGNWA*NLQYLK
Trigger: TTTTAAATACTGAAGATTGCAGGCCCAATTACCCAT...ATGGTGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGGATCTCAGACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCACCGTAATTATCTGTTaGCAGCTGGGTACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCTVIIC*QLGTAL
Trigger: CAAGGCTGTACCCAGCTGGCAACAGATAATTACGGT...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCATGGGTCCATGATAGTTaGCATGCCAACCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSWVHDS*HANQLQ
Trigger: CTGGAGCTGGTTGGCATGGCAACTATCATGGACCCA...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTGGGAGTCTTCAGATCTaGTCTTCATGGCTCATTATG +
Preference number: 4 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFGSLQI*SSWLIM
Trigger: CATAATGAGCCATGAAGAGCAGATCTGAAGACTCCC...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTCGGACCTCGAGTCCCTaGTTATGTCACCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIIRTSSP*LCHPLL
Trigger: GAGGAGGGGGTGACATAACCAGGGACTCGAGGTCCG...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp ATTGCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTAGATTGATTGCATCAGTCTaGTTCGACTTGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: IAQEVVMSQSDAFKVSGRLIASV*FDLRCL
Trigger: CAAGCACCTCAAGTCGAACCAGACTGATGCAATCAA...TCTACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEITRMLS*AAPRSS
Trigger: GGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGT...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGTAAGATGGGTAATTaGGCCTGCAATCTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWECKMGN*ACNLQY
Trigger: ATACTGAAGATTGCAGGCCCAATTACCCATCTTACA...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGATGGTTTGTGTAAGATaGGTAATTGGGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRMVCVR*VIGPAI
Trigger: GATTGCAGGCCCAATTACCCATCTTACACAAACCAT...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTTATTGTCACAATAGCTaGAAGCAGTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTYCHNS*KQFLPF
Trigger: GAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATA...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR CCA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGTATTCCCTGCTATCGTaGAGATTGTGTTTTAACCAG +
Preference number: 4 (lower is better)
Translates to: LMGETLPHGNDGKELYSWYSLLS*RLCFNQ
Trigger: CTGGTTAAAACACAATCTCCACGATAGCAGGGAATA...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAGATCCTCATGACTGGTaGTGCAGCCTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLDPHDW*CSLCEA
Trigger: TGCTTCACAGAGGCTGCACCACCAGTCATGAGGATC...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp CTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATaGGCTCTGCTTCTTTTCTTGCAGTGTAACACAGCT +
Preference number: 4 (lower is better)
Translates to: LLRSFPQKSPNP*ALLLFLQCNTA
Trigger: AGCTGTGTTACACTGCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTTATACATGACCCCATaGCAAACGGCCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFLYMTP*QTARIF
Trigger: AAAAATCCTGGCCGTTTGTCATGGGGTCATGTATAA...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTAGAGCTGTTTATACATaGCCCCATGACAAACGGCCA +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCRAVYT*PHDKRP
Trigger: TGGCCGTTTGTCATGGGGTCATGTATAAACAGCTCT...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCTTCTGGCTGGGCACTaGCATTACCAGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFLLAGH*HYQKMA
Trigger: GGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAG...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGGTGTCAATGAAGGCCTaGAACAGTTCTCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQVSMKA*NSSPRP
Trigger: GGGACGTGGAGAACTGTTTCAGGCCTTCATTGACAC...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCCAGGACAGCTGGGGTaGAGAGAATATGTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFPGQLG*REYVVA
Trigger: GGCCACTACATATTCTCTTCACCCCAGCTGTCCTGG...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCACCAAAAATGCCATGTaGTTTCTTAGGCGCCACTTG +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGTKNAM*FLRRHL
Trigger: CAAGTGGCGCCTAAGAAATCACATGGCATTTTTGGT...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCACCAAAAATGCCATGTaGTTTCTTAGGCGCCACTTG +
Preference number: 4 (lower is better)
Translates to: HPETAQSSTSLGIVFVIITKNAM*FLRRHL
Trigger: CAAGTGGCGCCTAAGAAATCACATGGCATTTTTGGT...GATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATCTCAGGAAGTGGTCATaGGCCAATCGGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYLRKWS*ANRMLS
Trigger: TGAAAGCATCCGATTGGCTCATGACCACTTCCTGAG...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTATTTCATTCAGGCAGTaGAACACAGGTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLISFRQ*NTGFNR
Trigger: CCTATTGAAACCTGTGTTTCACTGCCTGAATGAAAT...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCAAGTGGGCCTAGGTTCTaGCTGACCAGCGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSSGPRF*LTSEQK
Trigger: TTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACT...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp CATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: HPETAQSSTSLGIVFVIIEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...GATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp CAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGCCTGGGTATAGTAAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QKFSHPETAQSSTSLGIVSRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...TACTATACCCAGGCTGGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR TCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATCCTTCCACATGGGAATaGTGGGAAGGAGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYPSTWE*WEGVVL
Trigger: GAGTACAACTCCTTCCCATCATTCCCATGTGGAAGG...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTGGTCTGAGATCCTCATaGCTGGTGGTGCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFGLRSS*LVVQPL
Trigger: CAGAGGCTGCACCACCAGTCATGAGGATCTCAGACC...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGACTTGGGCCTTCCAGTaGGAAGAGTGGCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWTWAFQ*EEWPWA
Trigger: TGCCCAAGGCCACTCTTCTCACTGGAAGGCCCAAGT...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATAAGTCCTGCGATACCTaGAGGCCACTCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNKSCDT*RPLRLF
Trigger: GAACAAGCGGAGTGGCCTGCAGGTATCGCAGGACTT...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAACTGCTTCAGAGATGGTaGCAGCATGTTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKLLQRW*QHVLFL
Trigger: GAGGAAGAGAACATGCTGGCACCATCTCTGAAGCAG...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTACTGCTTCAGAGATGGTaGCAGCATGTTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLLLQRW*QHVLFL
Trigger: GAGGAAGAGAACATGCTGGCACCATCTCTGAAGCAG...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGGAGACGGTGCAGCTCTaGAGCAAAAGTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQETVQL*SKSVFL
Trigger: CAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTC...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TACTTAAAAACAACATTGTACCTGTTTGTAGGTAGGCTTGCAGAAGACAGTCCCTGCTGCTTGAGACGGTaGAGCTCTGCAGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: YLKTTLYLFVGRLAEDSPCCLRR*SSAAKV
Trigger: CACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCA...GGGACTGTCTTCTGCAAGCCTACCTACAAACAGGTACAATGTTGTTTTTAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAAAGCTGAAGAGTGGCTaGTGCTTGAGACGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEKLKSG*CLRRCS
Trigger: GCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTT...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTTACTCGATTGTCAAGTaGAACAGAGGGAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASYSIVK*NRGRRL
Trigger: CAACCTTCTCCCTCTGTTGCACTTGACAATCGAGTA...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAATGGTTCGACTTGAGGTaGTTGCGCTGCATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKWFDLR*LRCICR
Trigger: CCTACAAATGCAGCGCAAGCACCTCAAGTCGAACCA...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGGAATTTCGCTCTTGTTaGCCGGGCTGGAATGCAATG +
Preference number: 4 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQEFRSC*PGWNAM
Trigger: CATTGCATTCCAGCCCGGGCAACAAGAGCGAAATTC...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTGATGCCAGAACACTaGATTCTTTTTCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPVGTPQLLELKGERKDQLMPEH*ILFQFG
Trigger: TCCAAACTGAAAAAGAATGCAGTGTTCTGGCATCAG...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCAAACGAAAGGACCAACTaGCATGAAGGGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSNERTN*HEGTVT
Trigger: GGTCACTGTCCCTTCATGGCAGTTGGTCCTTTCGTT...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTGTGTCTAAAATGCTATaGTTGCAGAAACTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LSELRSQLTCGYSPTLRAVSKML*LQKLSL
Trigger: TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACAC...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR GCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAGTACTTCCTGTGCCTTaGCAGTGGGATTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLVLPVP*QWDSLC
Trigger: ACACAAGGAATCCCACTGGCAAGGCACAGGAAGTAC...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCATCCTGCTGTTGCACATaGCCCGTGTACTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSSCCCT*PVYCSM
Trigger: CATTGAACAGTACACGGGCCATGTGCAACAGCAGGA...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGTCCTGCTGTTGCACATaGCCCGTGTACTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQSCCCT*PVYCSM
Trigger: CATTGAACAGTACACGGGCCATGTGCAACAGCAGGA...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGGTGGTCTTTTCAGCAACCCTCACTaGAATGTAGGATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: CQHVLFLNQALYDERGGLFSNPH*NVGWQN
Trigger: ATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAA...AAGACCACCTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCC +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTTRMLS*AAPRSS
Trigger: GGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGT...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGTGTCTTGTGTGTAACTaGATTCCTTGCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRCLVCN*IPCMDL
Trigger: AAGATCCATGCAAGGAATCCAGTTACACACAAGACA...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp GCCTTGAGGAGCAAAGAATTCTGGACTGGTAAGTATTaGAAGCCCATCCAGAATTGTATAGGCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ALRSKEFWTGKY*KPIQNCIGRRT
Trigger: TGTCCTCCTGCCTATACAATTCTGGATGGGCTTCAAATACTTACCAGTCCAGAATTCTTTGCTCCTCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp AAGAGTGGCCTTGGGCAGGATAGACTAAATCACATTTaGGGTAGTAGTTGGGAGTCTTCAGATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSGLGQDRLNHI*GSSWESSDLLF
Trigger: GAAGAGCAGATCTGAAGACTCCCAACTACTACCCAAAATGTGATTTAGTCTATCCTGCCCAAGGCCACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCAGAGTTATACATGACCCCATaGCAAACGGCCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SLECRMAKSPLVGKTASELYMTP*QTARIF
Trigger: AAAAATCCTGGCCGTTTGTCATGGGGTCATGTATAA...CTCTGAAGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR TCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAATGGAGCATCCAGGCTaGGAGCTGTTTATACATGAC +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKMEHPG*ELFIHD
Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTCCAT...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAATGGAGCATCCAGGCTaGGAGCTGTTTATACATGAC +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLMEHPG*ELFIHD
Trigger: GTCATGTATAAACAGCTCTCAGCCTGGATGCTCCAT...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTAATGATCTTCAGCTaGCCCAGTAAATCGGATTCT +
Preference number: 4 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCLMIFS*PSKSDS
Trigger: AGAATCCGATTTACTGGGTCAGCTGAAGATCATTAA...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAACAGTAGTTGTGTCAATGAAGGCCTaGAACAGTTCTCCACGTCCC +
Preference number: 4 (lower is better)
Translates to: EFHQPGYSICYNLVVTVVVSMKA*NSSPRP
Trigger: GGGACGTGGAGAACTGTTTCAGGCCTTCATTGACAC...AACTACTGTTACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTGTTTTCAACATGTGTTaGGCTGTGTCAATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCVFNMC*AVSMKA
Trigger: GGCCTTCATTGACACAGCTCAACACATGTTGAAAAC...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGATTAACAGTTGTGCCAAAAGTTGAGTGGAATTGGGCACAGCTCTGTTTCCTGACCAAAAATGCCATGTaGTTTCTTAGGCGCCACTTG +
Preference number: 4 (lower is better)
Translates to: RLTVVPKVEWNWAQLCFLTKNAM*FLRRHL
Trigger: CAAGTGGCGCCTAAGAAATCACATGGCATTTTTGGT...CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCACAACTGTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLGLGSD*PANKNC
Trigger: ACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCC...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGCCTTCCACATGGGAATaGTGGGAAGGAGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQPSTWE*WEGVVL
Trigger: GAGTACAACTCCTTCCCATCATTCCCATGTGGAAGG...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTGCCACATGTTCTCCTTaGTGGGAGAGACCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEIATCSP*WERPFH
Trigger: GTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGC...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTATGTCACAAGAGTGGGTaGTCCAGTGCCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLCHKSG*SSASLL
Trigger: CAACAATGAGGCACTGGATCACCCACTCTTGTGACA...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTACTCTGCCTTTGGTCATaGTCAGTAGCAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLLCLWS*SVAVCL
Trigger: CAAACACACTGCTACTGATCATGACCAAAGGCAGAG...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCTCAGTATGCTGCAGGTaGGGCAGAGAGAACATCTAT +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFSVCCR*GRENIY
Trigger: ATAGATGTTCTCTCTGCCTCACCTGCAGCATACTGA...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGAGGAAAGGGAAGTCCTaGGATACCTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWRKGKS*DTCRPL
Trigger: GAGTGGCCTGCAGGTATCGCAGGACTTCCCTTTCCT...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCGCTCAGCCACAGTGCTaGGAATGCGATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTAQPQC*ECDPPP
Trigger: AGGTGGTGGATCGCATTCGCAGCACTGTGGCTGAGC...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTGATGCTCAGCCACAGTaGTGCGAATGCGATCCACCA +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEIDAQPQ*CECDPP
Trigger: TGGTGGATCGCATTCGCAGCACTGTGGCTGAGCATC...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAACAGTAGTTGAGCCAAATGATGCTCAGCCACAGTaGTGCGAATGCGATCCACCA +
Preference number: 4 (lower is better)
Translates to: QPGYSICYNLVVTVVEPNDAQPQ*CECDPP
Trigger: TGGTGGATCGCATTCGCAGCACTGTGGCTGAGCATC...ATTTGGCTCAACTACTGTTACGACTAGATTATAACAAATACTATACCCAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR GCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: IFESIQMYMSPFAERQFVLRCLR*ICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTAACGAAAGGACCAACTaGCATGAAGGGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVNERTN*HEGTVT
Trigger: GGTCACTGTCCCTTCATGGCAGTTGGTCCTTTCGTT...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR GCA 90 bp AGAGATGGTGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGTTCTGTGACAAGTCCTaGAGTTCTCTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RDGASMFSSSIRRCTMKEFCDKS*SSLSCF
Trigger: AAAACAACTGAGAGAACTGCAGGACTTGTCACAGAA...CTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCACCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFVDSGH*SHWGGG
Trigger: TCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGAC...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp AGATGGTGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGGTGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: RWCQHVLFLNQALYDERGDITRR*PLFDKE
Trigger: TTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTC...ACCTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCACCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAAGGAGTTGTACTCCTaGATGTTCAGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASKELYS*MFSNCF
Trigger: GAAGCAGTTACTGAACATCCAGGAGTACAACTCCTT...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTGTGGTGTCACAAGAGTaGGTGATCCAGTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVVVSQE*VIQCLI
Trigger: AATGAGGCACTGGATCACCCACTCTTGTGACACCAC...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp AGATTAACAGTTGTGCCAAAAGTTGAGTGGAATTGGGCACAGCTCTGTTTCCTGTGTGTGTCTCATGTCTaGGTCCATGATAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RLTVVPKVEWNWAQLCFLCVSHV*VHDSCH
Trigger: ATGGCAACTATCATGGACCCAGACATGAGACACACA...CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCACAACTGTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTCTATGGTTCTGTTGCTaGGACAAAAGAAGATTGATG +
Preference number: 4 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFLWFCC*DKRRLM
Trigger: CATCAATCTTCTTTTGTCCCAGCAACAGAACCATAG...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTTATACATGACCCCATaGCAAACGGCCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCLYMTP*QTARIF
Trigger: AAAAATCCTGGCCGTTTGTCATGGGGTCATGTATAA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCTTCTGGCTGGGCACTaGCATTACCAGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTLLAGH*HYQKMA
Trigger: GGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCTTGTGTGCTGACTGTTaGAAGGCCACATTCACATCA +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFLCADC*KATFTS
Trigger: TGATGTGAATGTGGCCTTTCAACAGTCAGCACACAA...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCTTGTGCTCCTTTCCGTaGTACTCGATTGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFLCSFP*YSIVKC
Trigger: GCACTTGACAATCGAGTATCACGGAAAGGAGCACAA...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATACCAAAAATGCCATGTaGTTTCTTAGGCGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYTKNAM*FLRRHL
Trigger: CAAGTGGCGCCTAAGAAATCACATGGCATTTTTGGT...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGCAGCTGGGAGAACTaGGACTCCAACACATCTACC +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFSSWEN*DSNTST
Trigger: GGTAGATGTGTTGGAGTCTCAGTTCTCCCAGCTGCT...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTACACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp AGATTAACAGTTGTGCCAAAAGTTGAGTGGAATTGGGCACAGCTCTGTTTCCTGAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RLTVVPKVEWNWAQLCFLSRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCACAACTGTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATCCTTCCACATGGGAATaGTGGGAAGGAGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNPSTWE*WEGVVL
Trigger: GAGTACAACTCCTTCCCATCATTCCCATGTGGAAGG...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTAGTTGTGCCAAAAGTTaGGTGGAATTGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVSCAKS*VELGTA
Trigger: AGCTGTGCCCAATTCCACTCAACTTTTGGCACAACT...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTTGCTTTAGGGGTATTTaGTGTGGTGGTGACGGACCC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEICFRGI*CGGDGP
Trigger: GGGTCCGTCACCACCACATCAAATACCCCTAAAGCA...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGAGCGAATATAGTCTGTaGCGAGCCGGCAGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWSEYSL*RAGRVD
Trigger: ATCGACTCTGCCGGCTCGGCACAGACTATATTCGCT...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTTCCAAATCAAGCAGTaGTTGGCGATAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTFQIKQ*LAIRLQ
Trigger: TTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAA...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAATCAGGCGCAAGTCCTaGAGTTCTCTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLIRRKS*SSLSCF
Trigger: AAAACAACTGAGAGAACTGCAGGACTTGCGCCTGAT...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGGAGACGGTGCAGCTCTaGAGCAAAAGTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWETVQL*SKSVFL
Trigger: CAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTC...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCCACAGTGCTGCGAATaGGATCCACCACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFPQCCE*DPPPVQ
Trigger: TTGAACAGGTGGTGGATCGCATTCGCAGCACTGTGG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAGCCACATTCACATCATaGTCAGTTACTGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLATFTS*SVTAVG
Trigger: ACCCACTGCAGTAACTGAGCATGATGTGAATGTGGC...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR GCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAGAAGGCCCTTCTCTTaGCTGAGTAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFRRPFS*LSSICF
Trigger: AAAGCAGATGCTACTCAGGCAAGAGAAGGGCCTTCT...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000561691.5
CDS-3UTR GCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTLRCLR*ICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTTTGAGGTGCTTGCGCTaGATTTGTAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVLRCLR*ICRAQQ
Trigger: CTGCTGGGCCCTACAAATGCAGCGCAAGCACCTCAA...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR GCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGAGTGTGCTGAAGCATTaGAGCTGCCTGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWSVLKH*SCLWCH
Trigger: GTGACACCACAGGCAGCTGCAATGCTTCAGCACACT...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TGCCCAGAGTTCCACCAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAACAAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: CPEFHQPGYSICYNLVVTKNSSC*SKRSPW
Trigger: CCATGGACTCCTCTTGGACCAGCATGAAGAATTCTT...TGTTACGACTAGATTATAACAAATACTATACCCAGGCTGGTGGAACTCTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLDITRR*PLFDKE
Trigger: TTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTC...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTACTCCTCGTCCTCTTCTaGCTGGGCACTGACATTACC +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLLLVLF*LGTDIT
Trigger: GGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAG...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTACACCAAGCTGAAGAGTaGCTGCTGCTTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLHQAEE*LLLETV
Trigger: CACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTG...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGGCTCAGTTACTGCAGTaGGTGGTGTTTTCAACATGT +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTAQLLQ*VVFSTC
Trigger: ACATGTTGAAAACACCACCCACTGCAGTAACTGAGC...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCATTGATTGCATCAGTCTaGTTCGACTTGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSLIASV*FDLRCL
Trigger: CAAGCACCTCAAGTCGAACCAGACTGATGCAATCAA...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTTGATTGCATCAGTCTaGTTCGACTTGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTLIASV*FDLRCL
Trigger: CAAGCACCTCAAGTCGAACCAGACTGATGCAATCAA...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGAAAGTTGAGTGGAATTaGGCACAGCTCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQKVEWN*AQLCFL
Trigger: CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTT...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATGACATAATAGGGCTTTaGTTTGTGCAGAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHDIIGL*FVQSGM
Trigger: CATCCCACTCTGCACAAACCAAAGCCCTATTATGTC...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAAAGAAAGGCAGTTTGTTaGATATTACTTGTCATGCTA +
Preference number: 4 (lower is better)
Translates to: SPVGTPQLLELKGERKDQRKAVC*ILLVML
Trigger: TAGCATGACAAGTAATATCCAACAAACTGCCTTTCT...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGAAATTGGAATGTCTGTaGGATAAATTTGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRKLECL*DKFEWV
Trigger: AACCCACTCAAATTTATCCCACAGACATTCCAATTT...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTAGAGCTGTTTATACATaGCCCCATGACAAACGGCCA +
Preference number: 4 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFRAVYT*PHDKRP
Trigger: TGGCCGTTTGTCATGGGGTCATGTATAAACAGCTCT...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTATTGTGTGCTGACTGTTaGAAGGCCACATTCACATCA +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLLCADC*KATFTS
Trigger: TGATGTGAATGTGGCCTTTCAACAGTCAGCACACAA...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTTTCTTAGGCGCCACTTaGTTGCATCAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFFLGAT*LHQSGS
Trigger: CGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAA...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCVARMGCFESSVTTLGTNRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTAGTGGGCCTAGGTTCTaGCTGACCAGCGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIISGPRF*LTSEQK
Trigger: TTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACT...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGTGGGCCTAGGTTCTaGCTGACCAGCGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFSGPRF*LTSEQK
Trigger: TTTTTGTTCGCTGGTCAGTCAGAACCTAGGCCCACT...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEINLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTAATCTTGAACAGGAGTaGAGACTGGCGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIINLEQE*RLAAKA
Trigger: GGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATT...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGTACTCGCCTTTGCTGTaGGGGCATGAAAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: LGERVKLSRNWNVCGINLYSPLL*GHESNH
Trigger: ATGGTTGCTTTCATGCCCTCACAGCAAAGGCGAGTA...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGCATGGGAAGCACAAGTaGGAACACCTGGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQHGKHK*EHLEML
Trigger: TAACATTTCCAGGTGTTCTCACTTGTGCTTCCCATG...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTAAGTTGTGCCAAAAGTTaGGTGGAATTGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLSCAKS*VELGTA
Trigger: AGCTGTGCCCAATTCCACTCAACTTTTGGCACAACT...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAAATGGAGGGCTAAGTTaGGTGTCCTTTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLNGGLS*VSFPSS
Trigger: TGAAGAAGGAAAGGACACTCAACTTAGCCCTCCATT...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAATCAGGCCTAATAGGTTaGCCGTATCCATGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKSGLIG*PYPCFL
Trigger: TAAGAAACATGGATACGGTCAACCTATTAGGCCTGA...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTCTGCTTCAGAGATGGTaGCAGCATGTTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEILLQRW*QHVLFL
Trigger: GAGGAAGAGAACATGCTGGCACCATCTCTGAAGCAG...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATTGGCTATGGTTCTGTTaGTGGGACAAAAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHWLWFC*WDKRRL
Trigger: CAATCTTCTTTTGTCCCAGCAACAGAACCATAGCCA...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQKNSSC*SKRSPW
Trigger: CCATGGACTCCTCTTGGACCAGCATGAAGAATTCTT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAA +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEISSSSG*ALTLPE
Trigger: TTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGA...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp AGACTCCAACACATCTACCTGGAGATAGTACTGAAGATTATCCACCAAAAATGCGCTCAGTTACTGCAGTaGGTGGTGTTTTCAACATGT +
Preference number: 4 (lower is better)
Translates to: RLQHIYLEIVLKIIHQKCAQLLQ*VVFSTC
Trigger: ACATGTTGAAAACACCACCCACTGCAGTAACTGAGC...GCATTTTTGGTGGATAATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAAACAGGAGTGAAGACTaGCGGCTAAAGCCCTTCACG +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLNRSED*RLKPFT
Trigger: CGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTT...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: VARMGCFESSVTTLGTWLTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCAGGAGCAAAGAATTCTaGACTGGTAAGTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGRSKEF*TGKYLK
Trigger: CTTCAAATACTTACCAGTCCAGAATTCTTTGCTCCT...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATATTTTGGGTAGTAGTTaGGAGTCTTCAGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHILGSS*ESSDLL
Trigger: GAGCAGATCTGAAGACTCCCAACTACTACCCAAAAT...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp CATAATAGGGCTTTGGTTTGTGCAGAGTGGGATGTATaGGTTAGAATCAAATCTCTCTTTCTAATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HNRALVCAEWDV*VRIKSLFLMEG
Trigger: GCCCTCCATTAGAAAGAGAGATTTGATTCTAACCAATACATCCCACTCTGCACAAACCAAAGCCCTATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAGGTCTAGGAAGTAGTTaGCATGTGATATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLGLGSS*HVIWRD
Trigger: ATCTCTCCATATCACATGTCAACTACTTCCTAGACC...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAATTAATGATCTTCAGCTaGCCCAGTAAATCGGATTCT +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKLMIFS*PSKSDS
Trigger: AGAATCCGATTTACTGGGTCAGCTGAAGATCATTAA...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAACAATACCTTGTGTGCTaGCTGTTGAAAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEQYLVC*LLKGHI
Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTATTG...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATTCTTAGGCGCCACTTaGTTGCATCAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLFLGAT*LHQSGS
Trigger: CGAACCAGACTGATGCAATCAAGTGGCGCCTAAGAA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCTCAGGAAGTGGTCATaGGCCAATCGGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTLRKWS*ANRMLS
Trigger: TGAAAGCATCCGATTGGCTCATGACCACTTCCTGAG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp ACTCCAACACATCTACCTGGAGATAGTACTGAAGATTATCCACCAAAAATGCCAAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TPTHLPGDSTEDYPPKMPNRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...TGGCATTTTTGGTGGATAATCTTCAGTACTATCTCCAGGTAGATGTGTTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCAAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSNRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAATTTCATTCAGGCAGTaGAACACAGGTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLISFRQ*NTGFNR
Trigger: CCTATTGAAACCTGTGTTTCACTGCCTGAATGAAAT...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTTGTTCAGTGAATATTTCAGCGAACAAAAACTGTaGCAGAGATCTAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRALFSEYFSEQKL*QRSRIS
Trigger: TGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCT...GAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLGLGSD*PANKNC
Trigger: ACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCC...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTGGCCTAGGTTCTGACTaGCCAGCGAACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVGLGSD*PANKNC
Trigger: ACAGTTTTTGTTCGCTGGTCAGTCAGAACCTAGGCC...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR TCA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTCACTGGAGAGAATCTTaGACAGGAGTGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVHWRES*TGVKTG
Trigger: GCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTG...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTAGAGCCAAATCTGAGTTaGTCTGATGATTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLEPNLS*SDDSEH
Trigger: GTGTTCGGAATCATCAGATCAACTCAGATTTGGCTC...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQSRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR GCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTAGAAGGCCCTTCTCTTaGCTGAGTAGCATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: IFESIQMYMSPFAERQFVRRPFS*LSSIFV
Trigger: CACAAAGATGCTACTCAGGCAAGAGAAGGGCCTTCT...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKDITRR*PLFDKE
Trigger: TTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTC...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CCA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGGTGCCAAAAGTTGAGTaGAATTGGGCACAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWVPKVE*NWAQLC
Trigger: ACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCAC...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATGGTCTAGGAAGTAGTTaGCATGTGATATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNGLGSS*HVIWRD
Trigger: ATCTCTCCATATCACATGTCAACTACTTCCTAGACC...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAAGAGCTGTTTATACATaGCCCCATGACAAACGGCCA +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLRAVYT*PHDKRP
Trigger: TGGCCGTTTGTCATGGGGTCATGTATAAACAGCTCT...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCAATACCTTGTGTGCTaGCTGTTGAAAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFQYLVC*LLKGHI
Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTATTG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAAATAGGATAAAGGATTaGGCCAGCAAATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IFCYNLGNVAVISIYEPENRIKD*ASKLLR
Trigger: CCTGAGCAATTTGCTGGCTCAATCCTTTATCCTATT...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TACTTAAAAACAACATTGTACCTGTTTGTAGGTAGGCTTGCAGAAGACAGTCCCAGCGAACAAAAACTGTaGCAGAGATCTAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: YLKTTLYLFVGRLAEDSPSEQKL*QRSRIS
Trigger: TGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCT...GGGACTGTCTTCTGCAAGCCTACCTACAAACAGGTACAATGTTGTTTTTAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR TCA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTAATATTGATTACCAGTaGTGGCTGGGCCATATTAAG +
Preference number: 4 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVNIDYQ*WLGHIK
Trigger: CTTAATATGGCCCAGCCATCACTGGTAATCAATATT...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGCATTCAGATGTACATaGGTCCCTTTGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLAFRCT*VPLQKG
Trigger: GCCTTTCTGCAAAGGGACTCATGTACATCTGAATGC...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTTTCCAAATCAAGCAGTaGTTGGCGATAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIIFQIKQ*LAIRLQ
Trigger: TTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAA...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCAACTGGTTTTATTCCCTaGTATCGTGGAGATTGTGTT +
Preference number: 4 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSTGFIP*YRGDCV
Trigger: AACACAATCTCCACGATAGCAGGGAATAAAACCAGT...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCTTTCCCTTGCTCCTTaGAGATATTGCTTTAGGGGT +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWLSLAP*RYCFRG
Trigger: ACCCCTAAAGCAATATCTGCAAGGAGCAAGGGAAAG...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGTGATATGGAGAGATaGGGATCACCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLCDMER*GSPRNS
Trigger: AGAGTTCCTGGGTGATCCCCATCTCTCCATATCACA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFDITRR*PLFDKE
Trigger: TTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTC...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTTTGATTGCATCAGTCTaGTTCGACTTGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIILIASV*FDLRCL
Trigger: CAAGCACCTCAAGTCGAACCAGACTGATGCAATCAA...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR CCA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAAAGGAGTTGTACTCCTaGATGTTCAGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEKELYS*MFSNCF
Trigger: GAAGCAGTTACTGAACATCCAGGAGTACAACTCCTT...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGAAAGTTGAGTGGAATTaGGCACAGCTCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWKVEWN*AQLCFL
Trigger: CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTT...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR CCA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCAGAGTGGGATGTATTaGTTAGAATCAAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQQSGMY*LESNLS
Trigger: AGAGAGATTTGATTCTAACCAATACATCCCACTCTG...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTGGTCTAGGAAGTAGTTaGCATGTGATATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFGLGSS*HVIWRD
Trigger: ATCTCTCCATATCACATGTCAACTACTTCCTAGACC...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAATGATCTTCAGCTaGCCCAGTAAATCGGATTCT +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNLMIFS*PSKSDS
Trigger: AGAATCCGATTTACTGGGTCAGCTGAAGATCATTAA...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCAATACCTTGTGTGCTaGCTGTTGAAAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTQYLVC*LLKGHI
Trigger: AATGTGGCCTTTCAACAGTCAGCACACAAGGTATTG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR TCA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTAATTTCATTCAGGCAGTaGAACACAGGTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLISFRQ*NTGFNR
Trigger: CCTATTGAAACCTGTGTTTCACTGCCTGAATGAAAT...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR TCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGACTGGTAAGTATTTaGAGCCCATCCAGAATTGTA +
Preference number: 4 (lower is better)
Translates to: IFESIQMYMSPFAERQFVGLVSI*SPSRIV
Trigger: TACAATTCTGGATGGGCTTCAAATACTTACCAGTCC...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAATCAGGCGCAAGTCCTaGAGTTCTCTCAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLIRRKS*SSLSCF
Trigger: AAAACAACTGAGAGAACTGCAGGACTTGCGCCTGAT...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR GCA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATGTGTCTAAAATGCTATaGTTGCAGAAACTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHVSKML*LQKLSL
Trigger: TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACAC...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp CAAGTGAGAACACCTGGAAATGTTACACGTTCTAGTCAAAGACCCAATATTATTCCAGGGTGTCTAAAATaGTATGCTTGCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: QVRTPGNVTRSSQRPNIIPGCLK*YACRNS
Trigger: TGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGG...AATAATATTGGGTCTTTGACTAGAACGTGTAACATTTCCAGGTGTTCTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR GCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCTTCACTTTCCCTTaGTCCTTGCAGATATTGCTT +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNFFTFP*SLQILL
Trigger: AAGCAATATCTGCAAGGAGCAAGGGAAAGTGAAGAA...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCCAGTGTCTTCTAATTaGGGATCAGCATTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTPVSSN*GSALSN
Trigger: GTTCGACAATGCTGATCCGCAATTAGAAGACACTGG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEILLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp CAGCCTGGGTATAGTATTTGTTATAATCTAGTCGTAACAGTAGTTGAGCCAAATCTTCTGTTACAACCTTaGGAACGTGGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: QPGYSICYNLVVTVVEPNLLLQP*ERGCYF
Trigger: GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAG...ATTTGGCTCAACTACTGTTACGACTAGATTATAACAAATACTATACCCAGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561691.5
ENST00000566251.1
CDS-3UTR CCA 90 bp ATTTTTGAAAGCATTCAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTTGTTGGGGAGAGAATTaGATTCAAGCAGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: IFESIQMYMSPFAERQFVCWGEN*IQAASK
Trigger: TTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACA...AACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTGAATGCTTTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp CTACAAGGTCAGCACATAGTGATTATAACTCTGCCTTaGGTCATGATCAGTAGCAGTGTGTTTGACATAATA +
Preference number: 4 (lower is better)
Translates to: LQGQHIVIITLP*VMISSSVFDII
Trigger: TATTATGTCAAACACACTGCTACTGATCATGACCAAAGGCAGAGTTATAATCACTATGTGCTGACCTTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTAGCGAACAAAAACTGTaGCAGAGATCTAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: FCYNLGNVAVISIYEPEISEQKL*QRSRIS
Trigger: TGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCT...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAAGTCGTAACAGTAGTTaGGCCAAATCTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLSRNSS*AKSELI
Trigger: GATCAACTCAGATTTGGCTCAACTACTGTTACGACT...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATTCAGCAACCCTCACTaGAATGTAGGATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLFSNPH*NVGWQN
Trigger: ATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTCAGCAACCCTCACTaGAATGTAGGATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTFSNPH*NVGWQN
Trigger: ATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAA...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CCA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATACAACCTTGGGAACGTaGCTGTTATTTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNTTLGT*LLFQFM
Trigger: CATAAATTGAAATAACAGCCACGTTCCCAAGGTTGT...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCAGAGAGAACATCTATaGAAATTACTTGGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTQREHL*KLLGPS
Trigger: GGAAGGCCCAAGTAATTTCCATAGATGTTCTCTCTG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp GCCAGAACACTGCATTCTTTTTCAGTTTGGAGGGCGTaGTTCAGTGAATATTTCTTTTTACTTACACTGATA +
Preference number: 4 (lower is better)
Translates to: ARTLHSFSVWRA*FSEYFFLLTLI
Trigger: TATCAGTGTAAGTAAAAAGAAATATTCACTGAACAACGCCCTCCAAACTGAAAAAGAATGCAGTGTTCTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAATTTCATTCAGGCAGTaGAACACAGGTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLISFRQ*NTGFNR
Trigger: CCTATTGAAACCTGTGTTTCACTGCCTGAATGAAAT...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCAGCGAACAAAAACTGTaGCAGAGATCTAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: DIYLCVARMGCFESSVTTSEQKL*QRSRIS
Trigger: TGAAATCCTAGATCTCTGTCACAGTTTTTGTTCGCT...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR TCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGTGAGTCAACATAAGTaGAGCACTGGACGTATATTT +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLVSQHK*STGRIF
Trigger: AAATATACGTCCAGTGCTTCACTTATGTTGACTCAC...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATTCCCTAGGTTACATTaGCTAGGAACCTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLFPRLH*LGTFCK
Trigger: TTTGCAAAAGGTTCCTAGCCAATGTAACCTAGGGAA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR GCA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATTAGAAAGCCAGGAATaGAAGGAATACAGATCATTC +
Preference number: 4 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLLESQE*KEYRSF
Trigger: GAATGATCTGTATTCCTTGCATTCCTGGCTTTCTAA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CCA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGCTCACTAAAGATACTTaGTCTTACTGGTTTTATTCC +
Preference number: 4 (lower is better)
Translates to: LGERVKLSRNWNVCGINLLTKDT*SYWFYS
Trigger: GGAATAAAACCAGTAAGACCAAGTATCTTTAGTGAG...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp ACATTGGCTAGGAACCTTTTGCAAATGTGTGAAGATTaGTATATAGGTTCAATATTCTCAACCTGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TLARNLLQMCED*YIGSIFSTCKV
Trigger: GACTTTACAGGTTGAGAATATTGAACCTATATACAAATCTTCACACATTTGCAAAAGGTTCCTAGCCAATGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
3UTR CAA 72 bp AAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTaGAGTGGGTTTGAAATGACTTCAGGAGTTTATCTA +
Preference number: 4 (lower is better)
Translates to: KLSRNWNVCGIN*SGFEMTSGVYL
Trigger: TAGATAAACTCCTGAAGTCATTTCAAACCCACTCAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS GCA 90 bp GCTTCCCCTTCCACACGCGCACCGGCCCCTGGGTCGGGCGGTTTGTaGCGAATCAACCCACCGAGACAATCGCTGCGGCGGAGCGGACGG +
Preference number: 5 (lower is better)
Translates to: ASPSTRAPAPGSGGL*RINPPRQSLRRSGR
Trigger: CCGTCCGCTCCGCCGCAGCGATTGTCTCGGTGGGTTGATTCGGCACAAACCGCCCGACCCAGGGGCCGGTGCGCGTGTGGAAGGGGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS GCA 90 bp CTGGGTCGGGCGGTTTGTGCCGAATCAACCCACCGAGACAATCGCTaGGGCGGAGCGGACGGGAAGCTGGGAAGGGGTCGCGGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: LGRAVCAESTHRDNR*GGADGKLGRGRGGV
Trigger: GACTCCCCCGCGACCCCTTCCCAGCTTCCCGTCCGCTCCGCCGCAGCGATTGTCTCGGTGGGTTGATTCGGCACAAACCGCCCGACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS GCA 90 bp TTCGGCAAGGCTGCATACTTCCAGGCAGACGCACCTTCACGAGAATaGTCAGCTGGGCGGCTCCACGCTCATCCAGTGGGCCTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: FGKAAYFQADAPSRE*SAGRLHAHPVGLGS
Trigger: AGAACCTAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGTGCGTCTGCCTGGAAGTATGCAGCCTTGCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566251.1
CDS CCA 90 bp GTGAAAATGGACCCAGGGTACCCGCTCAGAGCCAAGAGCAGTTCGTaGATCATTCCCACGGCGGACCTCGAGTCCCTGGTTATGTCACCC +
Preference number: 5 (lower is better)
Translates to: VKMDPGYPLRAKSSS*IIPTADLESLVMSP
Trigger: GGGTGACATAACCAGGGACTCGAGGTCCGCCGTGGGAATGATCCACGAACTGCTCTTGGCTCTGAGCGGGTACCCTGGGTCCATTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS CCA 90 bp AGCGAATATAGTCTGTGCCGAGCCGGCAGAGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGAAAGGGAAGTCCTGCGATACCTGGG +
Preference number: 5 (lower is better)
Translates to: SEYSLCRAGRVDSGH*SHWGGGKGSPAIPG
Trigger: CCCAGGTATCGCAGGACTTCCCTTTCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGACTCTGCCGGCTCGGCACAGACTATATTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570081.1
CDS CCA 90 bp AGCGAATATAGTCTGTGCCGAGCCGGCAGAGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGAAAGGGAAGTCCTGCGATACCTGCA +
Preference number: 5 (lower is better)
Translates to: SEYSLCRAGRVDSGH*SHWGGGKGSPAIPA
Trigger: TGCAGGTATCGCAGGACTTCCCTTTCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGACTCTGCCGGCTCGGCACAGACTATATTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GCAGTGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCTGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: AVLGDKAAKQNPALCRRPCRPLR*FQVKMD
Trigger: GTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCA...GGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS GCA 90 bp ATGCGATCCACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTGGCTaGTGCTTGAGACGGTGCAGCTCTGCAGCAAAAGTGTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: MRSTTCSKSTKLKSG*CLRRCSSAAKVSSW
Trigger: CCAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGTGGATCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CCA 90 bp GCGAATGCGATCCACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTaGCTGCTGCTTGAGACGGTGCAGCTCTGCAGCAAAAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ANAIHHLFKVHQAEE*LLLETVQLCSKSVF
Trigger: GAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGTGGATCGCATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCCTGGGTCGGGCGGTTaGTGCCGAATCAACCCACCG +
Preference number: 5 (lower is better)
Translates to: VARMGCFESSVTTLGTWLPGSGG*CRINPP
Trigger: CGGTGGGTTGATTCGGCACAAACCGCCCGACCCAGG...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp TTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTTCTTGCCCTGGGTCGGGCGGTTaGTGCCGAATCAACCCACCG +
Preference number: 5 (lower is better)
Translates to: LGAFHRSHQTHWLCFFSCPGSGG*CRINPP
Trigger: CGGTGGGTTGATTCGGCACAAACCGCCCGACCCAGG...GCAAGAAAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGGACGGAATTTCGCTCTaGTTGCCCGGGCTGGAATGC +
Preference number: 5 (lower is better)
Translates to: LMGETLPHGNDGKELYSWDGISL*LPGLEC
Trigger: GCATTCCAGCCCGGGCAACAAGAGCGAAATTCCGTC...CCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS GCA 90 bp CGATCCACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTGGCTGCTaGTTGAGACGGTGCAGCTCTGCAGCAAAAGTGTCTTCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RSTTCSKSTKLKSGC*LRRCSSAAKVSSWF
Trigger: AAACCAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGTGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CCA 90 bp CCTGTCAGTCCCCCAATGCCCAGATCCTCCTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAAGATGGCCCCTGTTTGATAAAGAAT +
Preference number: 5 (lower is better)
Translates to: PVSPPMPRSSSSSSG*ALTLPEDGPCLIKN
Trigger: ATTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAGGATCTGGGCATTGGGGGACTGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS GCA 90 bp GAGGACAGTACCAAGGGGAATGGCGCTAAACCATTCATGAGAAACTaGTCCACGAACCAATCATCTCCCACCACGCCCCTACAACTCAAG +
Preference number: 5 (lower is better)
Translates to: EDSTKGNGAKPFMRN*STNQSSPTTPLQLK
Trigger: CTTGAGTTGTAGGGGCGTGGTGGGAGATGATTGGTTCGTGGAGCAGTTTCTCATGAATGGTTTAGCGCCATTCCCCTTGGTACTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS-3UTR CAA 90 bp TTGTTCCAAATCAAGCAGTGCTTGGCGATAAGGCTGCAAAACAGAATCCAGCCCCCCACCTTGGCCCTGTaGAGATGGATGGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: LFQIKQCLAIRLQNRIQPPTLAL*RWMVIL
Trigger: CAGGATCACCATCCATCTCAACAGGGCCAAGGTGGG...GGGCTGGATTCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGAACAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CAA 90 bp GCGATAAGGCTGCAAAACAGAATCCAGCCCTGTGCAGAAGGCCCGCAGGTAGATATCACCCAGGAACTCTaGTTCCAAATCAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: AIRLQNRIQPCAEGPQVDITQEL*FQIKQC
Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGAT...ATCTACCTGCGGGCCTTCTGCACAGGGCTGGATTCTGTTTTGCAGCCTTATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CAA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAACTGCAGTTCTCTCAGTaGTTTTCCTGTCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWELQFSQ*FSCQSP
Trigger: GGGGGACTGACAGGAAAACAACTGAGAGAACTGCAG...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATGTGCTGCAGCTCAGCTaGCACCCGGCGCACACTCAG +
Preference number: 5 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYVLQLS*HPAHTQ
Trigger: CTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCAC...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTCAGTTGTGCCAAAAGTaGAGTGGAATTGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LSELRSQLTCGYSPTLRAQLCQK*SGIGHS
Trigger: GCTGTGCCCAATTCCACTCAACTTTTGGCACAACTG...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR CAA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTAATTGCGGATCAGCATaGTCGAACCCGGAAGTACTT +
Preference number: 5 (lower is better)
Translates to: ADQHCRTRKYFLCLASGINCGSA*SNPEVL
Trigger: AAGTACTTCCGGGTTCGACAATGCTGATCCGCAATT...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAATGCCACATGTTCTCCTaGATGGGAGAGACCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SPVGTPQLLELKGERKDQCHMFS*MGETLP
Trigger: TGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCA...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAATGATGGGAAGGAGGGCTTTGTGGGCCATTaGATCCATCACAACTACTCG +
Preference number: 5 (lower is better)
Translates to: HMFSLMGETLPHGNDGKEGFVGH*IHHNYS
Trigger: CGAGTAGTTGTGATGGATCAAATGGCCCACAAAGCC...CTCCTTCCCATCATTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTGAGCTGGCTATATCCTaGAAGATTTCAATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: ADQHCRTRKYFLCLASGIELAIS*KISMKP
Trigger: GGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTC...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS GCA 90 bp GACTGGGTAATTAATGAAGAAAAGAGGTTGAGTTGCTCACAGTTCTaGAGGCTGCACAGGAAGCACGGTGGCTTCAGCTTGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: DWVINEEKRLSCSQF*RLHRKHGGFSLASR
Trigger: CCTAGAAGCCAAGCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGAACTGTGAGCAACTCAACCTCTTTTCTTCATTAATTACCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CCA 90 bp ATCCTCCTCGTCCTCTTCTGGCTGGGCACTGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAATTCTTCATGCTGGTCCAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ILLVLFWLGTDITRR*PLFDKEFFMLVQEE
Trigger: CTCCTCTTGGACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS-3UTR CAA 90 bp CTTTTAATTTGTTCTACTACAACCATCACAGAGGGAAAAAGAAGCTGGAACTGGCCTGGGTCGGGCGGTTaGTGCCGAATCAACCCACCG +
Preference number: 5 (lower is better)
Translates to: LLICSTTTITEGKRSWNWPGSGG*CRINPP
Trigger: CGGTGGGTTGATTCGGCACAAACCGCCCGACCCAGG...CCAGTTCCAGCTTCTTTTTCCCTCTGTGATGGTTGTAGTAGAACAAATTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CAA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGATGGTGATCCTGCTGTaGCACATGGCCCGTGTACTG +
Preference number: 5 (lower is better)
Translates to: VARMGCFESSVTTLGTWLMVILL*HMARVL
Trigger: CAGTACACGGGCCATGTGCAACAGCAGGATCACCAT...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp GGGGATCACCCAGGAACTCTTGTTCCAAATCAAGCAGTGCTTGGCGATAAGGCTCAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: GDHPGTLVPNQAVLGDKAQIKQC*AIRLQN
Trigger: GTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTG...AGCCTTATCGCCAAGCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563517.5
CDS-3UTR CAA 90 bp TCTGCTGGTGCTCCTCAGGGCACTGTCCCAGACTGTCTTTTCCTCTCAGCCTACGACTGTTTCCAGGATTaGACAACCATGAATCTTTTG +
Preference number: 5 (lower is better)
Translates to: SAGAPQGTVPDCLFLSAYDCFQD*TTMNLL
Trigger: CAAAAGATTCATGGTTGTCAAATCCTGGAAACAGTC...GTAGGCTGAGAGGAAAAGACAGTCTGGGACAGTGCCCTGAGGAGCACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CAA 90 bp CTCTGGTCTGAGATCCTCATGACTGGTGGTGCAGCCTCTGTGAAGCAGCACCATGAAGATGGCCCCTGTTaGATAAAGAATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: LWSEILMTGGAASVKQHHEDGPC*IKNSSC
Trigger: GCATGAAGAATTCTTTATCAAACAGGGGCCATCTTC...ATGGTGCTGCTTCACAGAGGCTGCACCACCAGTCATGAGGATCTCAGACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CAGCAACCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTCTGCAGTTCTCTCAGTaGTTTTCCTGTCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: QQPSLECRMAKSPLVGKTLQFSQ*FSCQSP
Trigger: GGGGGACTGACAGGAAAACAACTGAGAGAACTGCAG...AGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGGTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CAA 90 bp CCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTTAGTGCTGCAGCTCAGCTaGCACCCGGCGCACACTCAG +
Preference number: 5 (lower is better)
Translates to: PKGYSRVSKMLCLQKLSLVLQLS*HPAHTQ
Trigger: CTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCAC...TAAACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GGATCAGAGATGCCACATGTTCTCCTTGATGGGAGAGACCCTTCCACATGGGAAACACTGGAGAGAATCTaGAACAGGAGTGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: GSEMPHVLLDGRDPSTWETLERI*NRSEDW
Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGT...TTCCCATGTGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCATCTCTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGCAGTTGTGCCAAAAGTaGAGTGGAATTGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRQLCQK*SGIGHS
Trigger: GCTGTGCCCAATTCCACTCAACTTTTGGCACAACTG...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTGCTCAGGAGCATGATTaGGATTATTCTCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTAQEHD*DYSQPQ
Trigger: CTGGGGCTGAGAATAATCCAAATCATGCTCCTGAGC...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCGAAGCCCATCCAGAATaGTATAGGCAGGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCEAHPE*YRQEDS
Trigger: GCTGTCCTCCTGCCTATACAATTCTGGATGGGCTTC...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS TCA 90 bp GAATTCTTCATGCTGGTCCAAGAGGAGTCCATGGAGCATCCAGGCTaGGAGCTGTTTATACATGACCCCATGACAAACGGCCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: EFFMLVQEESMEHPG*ELFIHDPMTNGQDF
Trigger: AAAATCCTGGCCGTTTGTCATGGGGTCATGTATAAACAGCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS TCA 90 bp TGGCAATACCACAGAACAGTCAAGATCCAGCATCCTAAGGCAATTTaGTGTGGAGGTTCGCTGCAGATAGGAAGAGGATGGCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: WQYHRTVKIQHPKAI*CGGSLQIGRGWQRE
Trigger: CTCTCTCTGCCATCCTCTTCCTATCTGCAGCGAACCTCCACATCAAATTGCCTTAGGATGCTGGATCTTGACTGTTCTGTGGTATTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564511.1
CDS GCA 90 bp CTGACATTACCAGAAGATGGCCCCTGTTTGATAAAGAATTCTTCATaGTGGTCCAAGAGGAGTCCATGGAGCATCCAGGCTGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LTLPEDGPCLIKNSS*WSKRSPWSIQAESC
Trigger: ACAGCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS-3UTR CAA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACCCACCTTGGCCCTGTaGAGATGGATGGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSPTLAL*RWMVIL
Trigger: CAGGATCACCATCCATCTCAACAGGGCCAAGGTGGG...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp TCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATCCCACCTTGGCCCTGTaGAGATGGATGGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: SVTASRRKGRVLSLSRRYPTLAL*RWMVIL
Trigger: CAGGATCACCATCCATCTCAACAGGGCCAAGGTGGG...ATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp ATCTTGAACAGGAGTGAAGACTGGCGGCTAAAGCCCTTCACGAGAATGCTCAGCAACAGAGGGAGAAGGTaGTCATCATCTAGCAATACC +
Preference number: 5 (lower is better)
Translates to: ILNRSEDWRLKPFTRMLSNRGRR*SSSSNT
Trigger: GGTATTGCTAGATGATGACAACCTTCTCCCTCTGTT...GCTGAGCATTCTCGTGAAGGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTGTGCTGCAGCTCAGCTaGCACCCGGCGCACACTCAG +
Preference number: 5 (lower is better)
Translates to: FCYNLGNVAVISIYEPEIVLQLS*HPAHTQ
Trigger: CTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCAGCAC...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAAACACTGGAGAGAATCTaGAACAGGAGTGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: SPVGTPQLLELKGERKDQTLERI*NRSEDW
Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGT...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564079.6
ENST00000565548.1
CDS-3UTR CAA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCCACATGTTCTCCTaGATGGGAGAGACCCTTCCA +
Preference number: 5 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGCHMFS*MGETLP
Trigger: TGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCA...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GCGGATCAGCATTGTCGAACCCGGAAGTACTTCCTGTGCCTTGCCAGTGGGATTCTGCTATCGTGGAGATaGTGTTTTAACCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: ADQHCRTRKYFLCLASGILLSWR*CFNQVL
Trigger: TAAAACCTGGTTAAAACACAATCTCCACGATAGCAG...AATCCCACTGGCAAGGCACAGGAAGTACTTCCGGGTTCGACAATGCTGATCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAGAGGCCTGGGAGGGGTaGGGGAACCTGGATAAAGTA +
Preference number: 5 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLEAWEG*GNLDKV
Trigger: TACTTTATCCAGGTTCCCCAACCCCTCCCAGGCCTC...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGTGCCAGCATGTTCTCTTCCTCAATCAGGCGTTGTACGATGAAAGAGGTGGTTTCCTCAATCAGGCGTaGTACGATGAAAGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: WCQHVLFLNQALYDERGGFLNQA*YDERGG
Trigger: ACCACCTCTTTCATCGTACAACGCCTGATTGAGGAA...ACCACCTCTTTCATCGTACAACGCCTGATTGAGGAAGAGAACATGCTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS TCA 90 bp TCTTCATTTCTTAGACCCGCAGAGTGTCTTCCTGCCTCTGAGCTGTaGGTGTTGTTCCCTTTGCCCGGGATGCTCTTGTTTTTAATACCA +
Preference number: 5 (lower is better)
Translates to: SSFLRPAECLPASEL*VLFPLPGMLLFLIP
Trigger: TGGTATTAAAAACAAGAGCATCCCGGGCAAAGGGAACAACACTCACAGCTCAGAGGCAGGAAGACACTCTGCGGGTCTAAGAAATGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS-3UTR CAA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAGTCAGGTTCACATTTaGATTCTCAAACATCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSELRSQLTCGYSPTLRASQVHI*ILKHLD
Trigger: GTCCAGATGTTTGAGAATCAAAATGTGAACCTGACT...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAAAACAGAGGGAGAAGGTaGTCATCATCTAGCAATACC +
Preference number: 5 (lower is better)
Translates to: SPVGTPQLLELKGERKDQNRGRR*SSSSNT
Trigger: GGTATTGCTAGATGATGACAACCTTCTCCCTCTGTT...TTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CAAATTGCTCAGGAAGTGGTCATGAGCCAATCGGATGCTTTCAAAGTCTCGGGTTTCCGTGATACTCGATaGTCAAGTGCAACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: QIAQEVVMSQSDAFKVSGFRDTR*SSATEG
Trigger: TCCCTCTGTTGCACTTGACAATCGAGTATCACGGAA...ACCCGAGACTTTGAAAGCATCCGATTGGCTCATGACCACTTCCTGAGCAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LCVARMGCFESSVTTLGTFDLRC*RCICRA
Trigger: GGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAA...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCC +
Preference number: 5 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTFDLRC*RCICRA
Trigger: GGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAA...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGAATGATGGGAAGGAGTaGTACTCCTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRNDGKE*YSWMFS
Trigger: ACTGAACATCCAGGAGTACAACTCCTTCCCATCATT...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACTTCAACCCCTATGGTTaGTGTAAGATGGGTAATTGG +
Preference number: 5 (lower is better)
Translates to: SSPVGTPQLLELKGERKDFNPYG*CKMGNW
Trigger: CCAATTACCCATCTTACACAAACCATAGGGGTTGAA...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTCCACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTCCAGTGCCTCATTGTaGGGGAGAGAATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: LPHGNDGKELYSWMFSNCSSASL*GRELDS
Trigger: TGAATCCAATTCTCTCCCCAACAATGAGGCACTGGA...GCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp ACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACCAACTCTTCTTCACTTTCCCTaGCTCCTTGCAGATATTGCT +
Preference number: 5 (lower is better)
Translates to: TCGYSPTLRAKGRTKGPTLLHFP*LLADIA
Trigger: AGCAATATCTGCAAGGAGCAAGGGAAAGTGAAGAAG...AGTTGGTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp ATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGCATCACTGATCCCTGCATGGCTTTGGCTAGGAACCTTTaGCAAATGTGTGAAGATTTG +
Preference number: 5 (lower is better)
Translates to: IAGSSSFPSSGITDPCMALARNL*QMCEDL
Trigger: CAAATCTTCACACATTTGCAAAAGGTTCCTAGCCAA...AGCCATGCAGGGATCAGTGATGCCAGAGGAAGGGAAGGAACTGCTTCCAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTGCCAGTGGGATTCCTaGTGTGTCTCATGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCCQWDS*CVSCLG
Trigger: ACCCAGACATGAGACACACAAGGAATCCCACTGGCA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS GCA 90 bp AAGAATACCTTAGACTGGGTAATTAATGAAGAAAAGAGGTTGAGTTaGTCACAGTTCTGCAGGCTGCACAGGAAGCACGGTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KNTLDWVINEEKRLS*SQFCRLHRKHGGFS
Trigger: GCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGAACTGTGAGCAACTCAACCTCTTTTCTTCATTAATTACCCAGTCTAAGGTATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS GCA 90 bp AAGTCTGGGTATAGGCAACCAGTGCTCTCAGGAAACATCAGAGAATaGAAGTCACTGCCTACCAGCATCACCGTAAGAATTACAACAGCT +
Preference number: 5 (lower is better)
Translates to: KSGYRQPVLSGNIRE*KSLPTSITVRITTA
Trigger: AGCTGTTGTAATTCTTACGGTGATGCTGGTAGGCAGTGACTTGCATTCTCTGATGTTTCCTGAGAGCACTGGTTGCCTATACCCAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CCA 90 bp ACATTACCAGAAGATGGCCCCTGTTTGATAAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGGAGCATCCAGGCTGAGAGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: TLPEDGPCLIKNSSC*SKRSPWSIQAESCL
Trigger: TAAACAGCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTCTGGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS-3UTR CAA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGATGGTGATCCTGCTGTaGCACATGGCCCGTGTACTG +
Preference number: 5 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQMVILL*HMARVL
Trigger: CAGTACACGGGCCATGTGCAACAGCAGGATCACCAT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGCAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: VARMGCFESSVTTLGTWLQIKQC*AIRLQN
Trigger: GTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTG...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GATGCTTTCAAAGTCTCGGGTAGAATTGATCTGATGAAGCAGCTGGGAGAACTGATCACCCAGGAACTCTaGTTCCAAATCAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: DAFKVSGRIDLMKQLGELITQEL*FQIKQC
Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGAT...CAGTTCTCCCAGCTGCTTCATCAGATCAATTCTACCCGAGACTTTGAAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAACTGCAGTTCTCTCAGTaGTTTTCCTGTCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKLQFSQ*FSCQSP
Trigger: GGGGGACTGACAGGAAAACAACTGAGAGAACTGCAG...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCTCAGTCTGGTTCGACTaGAGGTGCTTGCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTSVWFD*RCLRCI
Trigger: AATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGA...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTTTTCTTAGGCGCCACTaGATTGCATCAGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASFLRRH*IASVWF
Trigger: GAACCAGACTGATGCAATCAAGTGGCGCCTAAGAAA...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCACACTGGAGAGAATCTaGAACAGGAGTGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGTLERI*NRSEDW
Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGT...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CAA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGTCTGCTCTATATTGTTaGTTTACCGCTGTATCTCCC +
Preference number: 5 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRSALYC*FTAVSP
Trigger: GGGAGATACAGCGGTAAACAAACAATATAGAGCAGA...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTCTCTGAGCTGAGATCACAGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTTTGCAGAAAGGCAGTTaGTTGGATATTACTTGTCAT +
Preference number: 5 (lower is better)
Translates to: LSELRSQLTCGYSPTLRALQKGS*LDITCH
Trigger: ATGACAAGTAATATCCAACAAACTGCCTTTCTGCAA...AGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCTGTGATCTCAGCTCAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCATAGTACTTCCTGTGCCTaGCCAGTGGGATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LFLQCNTAYQCLLIADQHSTSCA*PVGFLV
Trigger: CACAAGGAATCCCACTGGCAAGGCACAGGAAGTACT...ATGCTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp AGGCCTTGTGGTCCAAGGCTCAGGCCTAATAGGTTGACCGTATCCATGTTTCTTATCTATGGAAATTACTaGGGCCTTCCAGTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: RPCGPRLRPNRLTVSMFLIYGNY*GLPVRR
Trigger: TCTTCTCACTGGAAGGCCCAAGTAATTTCCATAGAT...AAGAAACATGGATACGGTCAACCTATTAGGCCTGAGCCTTGGACCACAAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp AGCTCACCTGTGGGTACTCCCCAACTCTTAGAGCTAAAGGGAGAACGAAAGGACAAACCCCTATTAGGGTaGCTGATTTTTAGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SSPVGTPQLLELKGERKDKPLLG*LIFSLK
Trigger: TTTCAGGCTAAAAATCAGCAACCCTAATAGGGGTTT...GTCCTTTCGTTCTCCCTTTAGCTCTAAGAGTTGGGGAGTACCCACAGGTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS TCA 90 bp TTACTGCAGTGGGTGGTGTTTTCAACATGTGTTGAGCTGTGTCAATaGAGGCCTGAAACAGTTCTCCACGTCCCAGAAGGTAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LLQWVVFSTCVELCQ*RPETVLHVPEGKSL
Trigger: AAGACTTTTACCTTCTGGGACGTGGAGAACTGTTTCAGGCCTTCATTGACACAGCTCAACACATGTTGAAAACACCACCCACTGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563963.1
ENST00000564079.6
CDS CCA 90 bp CTGTTGAAAGGCCACATTCACATCATGCTCAGTTACTGCAGTGGGTaGTGTTTTCAACATGTGTTGAGCTGTGTCAATGAAGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: LLKGHIHIMLSYCSG*CFQHVLSCVNEGLK
Trigger: TTTCAGGCCTTCATTGACACAGCTCAACACATGTTGAAAACACCACCCACTGCAGTAACTGAGCATGATGTGAATGTGGCCTTTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563963.1
ENST00000564079.6
CDS-3UTR CAA 90 bp AGATTAACAGTTGTGCCAAAAGTTGAGTGGAATTGGGCACAGCTCTGTTTCCTGCAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: RLTVVPKVEWNWAQLCFLQIKQC*AIRLQN
Trigger: GTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTG...CAGGAAACAGAGCTGTGCCCAATTCCACTCAACTTTTGGCACAACTGTTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTATCACCCAGGAACTCTaGTTCCAAATCAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCITQEL*FQIKQC
Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGAT...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp CCCTCACTGGAATGTAGGATGGCAAAATCTCCACTCGTAGGGAAAACTGCTTCAGAAGATGGCCCCTGTTaGATAAAGAATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: PSLECRMAKSPLVGKTASEDGPC*IKNSSC
Trigger: GCATGAAGAATTCTTTATCAAACAGGGGCCATCTTC...TGAAGCAGTTTTCCCTACGAGTGGAGATTTTGCCATCCTACATTCCAGTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563412.1
CDS-3UTR CAA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCAACAGAGGGAGAAGGTaGTCATCATCTAGCAATACC +
Preference number: 5 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGNRGRR*SSSSNT
Trigger: GGTATTGCTAGATGATGACAACCTTCTCCCTCTGTT...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCC +
Preference number: 5 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNFDLRC*RCICRA
Trigger: GGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAA...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTATCAGTCTGGTTCGACTaGAGGTGCTTGCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLSVWFD*RCLRCI
Trigger: AATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGA...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTTTCTTAGGCGCCACTaGATTGCATCAGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: WLEWDVLNLLLQPWERGCFLRRH*IASVWF
Trigger: GAACCAGACTGATGCAATCAAGTGGCGCCTAAGAAA...ACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TGCTGCTTAGGAGCTTTCCACAGAAGTCACCAAACCCATTGGCTCTGCTTCTTTAGCCTATCTTACCTGTaGCTTTCTTACTTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: CCLGAFHRSHQTHWLCFFSLSYL*LSYLVV
Trigger: TACCACCAAGTAAGAAAGCAACAGGTAAGATAGGCT...AAAGAAGCAGAGCCAATGGGTTTGGTGACTTCTGTGGAAAGCTCCTAAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTCGAGCAGGAGCTGGCTATATCCTTGAAGATTTCAATGAAGCCCAGGTGAGGTCAGTTTGGAGGGCGTaGTTCAGTGAATATTTCTTT +
Preference number: 5 (lower is better)
Translates to: LRAGAGYILEDFNEAQVRSVWRA*FSEYFF
Trigger: AAAGAAATATTCACTGAACAACGCCCTCCAAACTGA...CCTCACCTGGGCTTCATTGAAATCTTCAAGGATATAGCCAGCTCCTGCTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTACAGCAGGCCATAGTTaGCCAGCTCCTGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FCYNLGNVAVISIYEPEITAGHS*PAPAPE
Trigger: CTCTGGAGCAGGAGCTGGCAAACTATGGCCTGCTGT...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGGCTCTGCTTCTTTTCTaGCAGTGTAACACAGCTTAC +
Preference number: 5 (lower is better)
Translates to: VARMGCFESSVTTLGTWLALLLF*QCNTAY
Trigger: GTAAGCTGTGTTACACTGCAAGAAAAGAAGCAGAGC...CAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS TCA 90 bp CCTGTGAGAAACTCAGAAATACTCACTTTTCCAGGACAGCTGGGGTaGAGAGAATATGTAGTGGCCACTGTACTTTGTAGGAAAGACCTA +
Preference number: 5 (lower is better)
Translates to: PVRNSEILTFPGQLG*REYVVATVLCRKDL
Trigger: TAGGTCTTTCCTACAAAGTACAGTGGCCACTACATATTCTCTTCACCCCAGCTGTCCTGGAAAAGTGAGTATTTCTGAGTTTCTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562053.1
CDS-3UTR CAA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTTGCAGGCCACTCCGCTaGTTCCAGGTGAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFCRPLR*FQVKMD
Trigger: GTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCA...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp ATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAACAAATCAAGCAGTGCTaGGCGATAAGGCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: MMGRSCTPGCSVTASRRKQIKQC*AIRLQN
Trigger: GTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTG...TTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp TGTACTCCTGGATGTTCAGTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCAATCACCCAGGAACTCTaGTTCCAAATCAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: CTPGCSVTASRRKGRVLSITQEL*FQIKQC
Trigger: GCACTGCTTGATTTGGAACAAGAGTTCCTGGGTGAT...TGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTACTGAACATCCAGGAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGTTCGACTTGAGGTGCTaGCGCTGCATTTGTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LGERVKLSRNWNVCGINLFDLRC*RCICRA
Trigger: GGCCCTACAAATGCAGCGCAAGCACCTCAAGTCGAA...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTAACACTGGAGAGAATCTaGAACAGGAGTGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: ARMGCFESSVTTLGTWLLTLERI*NRSEDW
Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGT...TAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CAA 90 bp GTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCGTTCATAGGTTTTGGTaGTCCGTTGAGGATTTAGGT +
Preference number: 5 (lower is better)
Translates to: VWLEWDVLNLLLQPWERGVHRFW*SVEDLG
Trigger: ACCTAAATCCTCAACGGACAACCAAAACCTATGAAC...GCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTAGCCAACTTGCTGTGTaGAGAAGAGGCCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVSQLAV*RRGLGG
Trigger: CCCTCCCAGGCCTCTTCTCAACACAGCAAGTTGGCT...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS CCA 90 bp CATCTATGCCACATAAGGACAGCATCTACCCATCACAGTAGTTCTTaGTTGTTTTCAGCCAGCCCTCTGGAGTGGCATCTATTAATATAT +
Preference number: 5 (lower is better)
Translates to: HLCHIRTASTHHSSS*LFSASPLEWHLLIY
Trigger: ATATATTAATAGATGCCACTCCAGAGGGCTGGCTGAAAACAACCAAGAACTACTGTGATGGGTAGATGCTGTCCTTATGTGGCATAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS-3UTR CAA 90 bp AGCCAATCGGATGCTTTCAAAGTCTCGGGTAGAATTGATCTGATGAAGCAGCTGGACTGTTTCCAGGATTaGACAACCATGAATCTTTTG +
Preference number: 5 (lower is better)
Translates to: SQSDAFKVSGRIDLMKQLDCFQD*TTMNLL
Trigger: CAAAAGATTCATGGTTGTCAAATCCTGGAAACAGTC...CAGCTGCTTCATCAGATCAATTCTACCCGAGACTTTGAAAGCATCCGATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCTGCAGTTCTCTCAGTaGTTTTCCTGTCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFLQFSQ*FSCQSP
Trigger: GGGGGACTGACAGGAAAACAACTGAGAGAACTGCAG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCTTCCGTGATACTCGATaGTCAAGTGCAACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFFRDTR*SSATEG
Trigger: TCCCTCTGTTGCACTTGACAATCGAGTATCACGGAA...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGACACTGGAGAGAATCTaGAACAGGAGTGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQTLERI*NRSEDW
Trigger: CCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CAA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTTGCCACATGTTCTCCTaGATGGGAGAGACCCTTCCA +
Preference number: 5 (lower is better)
Translates to: FCYNLGNVAVISIYEPEICHMFS*MGETLP
Trigger: TGGAAGGGTCTCTCCCATCAAGGAGAACATGTGGCA...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGAATCTGAAGGTACTCTaGGTATCAGACCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQNLKVL*VSDQQQ
Trigger: CTGCTGTTGGTCTGATACCAAGAGTACCTTCAGATT...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CAGATGTACATGAGTCCCTTTGCAGAAAGGCAGTTTGTTGGATATTACTTGTCATACCGTAATTATCTGTaGCCAGCTGGGTACAGCCTT +
Preference number: 5 (lower is better)
Translates to: QMYMSPFAERQFVGYYLSYRNYL*PAGYSL
Trigger: AAGGCTGTACCCAGCTGGCAACAGATAATTACGGTA...TGACAAGTAATATCCAACAAACTGCCTTTCTGCAAAGGGACTCATGTACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CACATGGGAATGATGGGAAGGAGTTGTACTCCTGGATGTTCAGTAACTGCTTCTAGACTAAATCACATTTaGGGTAGTAGTTGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: HMGMMGRSCTPGCSVTASRLNHI*GSSWES
Trigger: AGACTCCCAACTACTACCCAAAATGTGATTTAGTCT...AGAAGCAGTTACTGAACATCCAGGAGTACAACTCCTTCCCATCATTCCCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS CCA 90 bp ACCCATCACAGTAGTTCTTGGTTGTTTTCAGCCAGCCCTCTGGAGTaGCATCTATTAATATATATCTTACTCTTCCTGGTACAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: THHSSSWLFSASPLE*HLLIYILLFLVQQK
Trigger: TTTCTGCTGTACCAGGAAGAGTAAGATATATATTAATAGATGCCACTCCAGAGGGCTGGCTGAAAACAACCAAGAACTACTGTGATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS-3UTR CAA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTCAGTCTGGTTCGACTaGAGGTGCTTGCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: DIYLCVARMGCFESSVTTSVWFD*RCLRCI
Trigger: AATGCAGCGCAAGCACCTCAAGTCGAACCAGACTGA...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GTAACTGCTTCTAGGAGAAAAGGTAGAGTCCTATCACTAAGCCGCAGATATTTAAATGATGGGAAGGAGTaGTACTCCTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: VTASRRKGRVLSLSRRYLNDGKE*YSWMFS
Trigger: ACTGAACATCCAGGAGTACAACTCCTTCCCATCATT...TAAATATCTGCGGCTTAGTGATAGGACTCTACCTTTTCTCCTAGAAGCAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATGATGGGAAGGAGTaGTACTCCTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: EWDVLNLLLQPWERGCYFNDGKE*YSWMFS
Trigger: ACTGAACATCCAGGAGTACAACTCCTTCCCATCATT...GAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGTTGTTGGGGAGAGAATaGGATTCAAGCAGCATCCAA +
Preference number: 5 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQLLGRE*DSSSIQ
Trigger: TTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAA...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTACAGCTGGGTACAGCCTaGAGGAGCAAAGAATTCTGG +
Preference number: 5 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLQLGTA*RSKEFW
Trigger: CCAGAATTCTTTGCTCCTCAAGGCTGTACCCAGCTG...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGGACTGTTTCCAGGATTaGACAACCATGAATCTTTTG +
Preference number: 5 (lower is better)
Translates to: LCVARMGCFESSVTTLGTDCFQD*TTMNLL
Trigger: CAAAAGATTCATGGTTGTCAAATCCTGGAAACAGTC...CGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TTTCAATTTATGAGCCAGAAATTTTCACATCCCGAAACTGCCCAGAGTTCCACCAGTCAGGTTCACATTTaGATTCTCAAACATCTGGAC +
Preference number: 5 (lower is better)
Translates to: FQFMSQKFSHPETAQSSTSQVHI*ILKHLD
Trigger: GTCCAGATGTTTGAGAATCAAAATGTGAACCTGACT...GGTGGAACTCTGGGCAGTTTCGGGATGTGAAAATTTCTGGCTCATAAATTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561691.5
CDS-3UTR CAA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTTTTCTTAGGCGCCACTaGATTGCATCAGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFFLRRH*IASVWF
Trigger: GAACCAGACTGATGCAATCAAGTGGCGCCTAAGAAA...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp ATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: IFCYNLGNVAVISIYEPEAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...TTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CAA 90 bp CTTCTTTTCTTGCAGTGTAACACAGCTTACCAGTGTCTTCTAATTGCGGATCAGCAGAAAGGCAGTTTGTaGGATATTACTTGTCATGCT +
Preference number: 5 (lower is better)
Translates to: LLFLQCNTAYQCLLIADQQKGSL*DITCHA
Trigger: AGCATGACAAGTAATATCCAACAAACTGCCTTTCTG...CTGATCCGCAATTAGAAGACACTGGTAAGCTGTGTTACACTGCAAGAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTGAAGATGGCCCCTGTTaGATAAAGAATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFEDGPC*IKNSSC
Trigger: GCATGAAGAATTCTTTATCAAACAGGGGCCATCTTC...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAGTCAGGTTCACATTTaGATTCTCAAACATCTGGAC +
Preference number: 5 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQSQVHI*ILKHLD
Trigger: GTCCAGATGTTTGAGAATCAAAATGTGAACCTGACT...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp AGAATGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTTGTTTTCAACATGTGTaGAGCTGTGTCAATGAAGGC +
Preference number: 5 (lower is better)
Translates to: RMGCFESSVTTLGTWLLFCFQHV*SCVNEG
Trigger: GCCTTCATTGACACAGCTCAACACATGTTGAAAACA...AAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTTTCCGTGATACTCGATaGTCAAGTGCAACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVFRDTR*SSATEG
Trigger: TCCCTCTGTTGCACTTGACAATCGAGTATCACGGAA...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATTTCTTAGGCGCCACTaGATTGCATCAGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLFLRRH*IASVWF
Trigger: GAACCAGACTGATGCAATCAAGTGGCGCCTAAGAAA...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
CDS-3UTR CAA 90 bp TGGGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTCTGCTCTATATTGTTaGTTTACCGCTGTATCTCCC +
Preference number: 5 (lower is better)
Translates to: WDVLNLLLQPWERGCYFNSALYC*FTAVSP
Trigger: GGGAGATACAGCGGTAAACAAACAATATAGAGCAGA...ATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000564079.6
CDS-3UTR CAA 90 bp ATGAACATATCCAACAAATGTTCTCAATGTAAAGGATCAGAGATGCCACATGTTATAGCAGGGAATAAGTaGTCAGAGCTTCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: MNISNKCSQCKGSEMPHVIAGNK*SELPSV
Trigger: CACACTGGGAAGCTCTGACAACTTATTCCCTGCTAT...AACATGTGGCATCTCTGATCCTTTACATTGAGAACATTTGTTGGATATGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TCCCAAAAGGTTATTCCAGGGTGTCTAAAATGCTATGCTTGCAGAAACTCAGTTATTATAACTCTGCCTTaGGTCATGATCAGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: SQKVIPGCLKCYACRNSVIITLP*VMISSS
Trigger: ACTGCTACTGATCATGACCAAAGGCAGAGTTATAAT...AACTGAGTTTCTGCAAGCATAGCATTTTAGACACCCTGGAATAACCTTTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTCTCAGGCCTAATAGGTaGACCGTATCCATGTTTCTT +
Preference number: 5 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFLRPNR*TVSMFL
Trigger: AAGAAACATGGATACGGTCAACCTATTAGGCCTGAG...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGGTCTGTGGGATAAATTaGAGTGGGTTTGAAATGACT +
Preference number: 5 (lower is better)
Translates to: ESSVTTLGTWLLFQFMSQVCGIN*SGFEMT
Trigger: AGTCATTTCAAACCCACTCAAATTTATCCCACAGAC...CTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GGATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTTGTTTTCAACATGTGTaGAGCTGTGTCAATGAAGGC +
Preference number: 5 (lower is better)
Translates to: GCFESSVTTLGTWLLFQFCFQHV*SCVNEG
Trigger: GCCTTCATTGACACAGCTCAACACATGTTGAAAACA...AAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGTGTTTTCAACATGTGTaGAGCTGTGTCAATGAAGGC +
Preference number: 5 (lower is better)
Translates to: LGERVKLSRNWNVCGINLCFQHV*SCVNEG
Trigger: GCCTTCATTGACACAGCTCAACACATGTTGAAAACA...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCGCCGCAGATATTTATTaGTGTGTGGCTAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: DIYLCVARMGCFESSVTTAADIY*CVARMG
Trigger: TCCCATTCTAGCCACACACAAATAAATATCTGCGGC...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563147.5
ENST00000564079.6
ENST00000566251.1
CDS-3UTR CAA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCCTGTTGCTTTCTTACTaGGTGGTAACATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: DIYLCVARMGCFESSVTTLLLSY*VVTSSS
Trigger: ACTGCTGGATGTTACCACCAAGTAAGAAAGCAACAG...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TATTATTATTATTATTGTCACAATAGCTGGAAGCAGTTCCTTCCCTTCCTCTGGGCAGAGTGGGATGTATaGGTTAGAATCAAATCTCTC +
Preference number: 5 (lower is better)
Translates to: YYYYYCHNSWKQFLPFLWAEWDV*VRIKSL
Trigger: GAGAGATTTGATTCTAACCAATACATCCCACTCTGC...CCAGAGGAAGGGAAGGAACTGCTTCCAGCTATTGTGACAATAATAATAATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp CTAGGTGAGAGAGTAAAGCTTTCTAGAAATTGGAATGTCTGTGGGATAAATTTGATGGCTATGGTTCTGTaGCTGGGACAAAAGAAGATT +
Preference number: 5 (lower is better)
Translates to: LGERVKLSRNWNVCGINLMAMVL*LGQKKI
Trigger: AATCTTCTTTTGTCCCAGCAACAGAACCATAGCCAT...CAAATTTATCCCACAGACATTCCAATTTCTAGAAAGCTTTACTCTCTCACCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS-3UTR CAA 90 bp TTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTATGAGCCAGAAATTGACTGTTTCCAGGATTaGACAACCATGAATCTTTTG +
Preference number: 5 (lower is better)
Translates to: FCYNLGNVAVISIYEPEIDCFQD*TTMNLL
Trigger: CAAAAGATTCATGGTTGTCAAATCCTGGAAACAGTC...AATTTCTGGCTCATAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GATGTTTTGAATCTTCTGTTACAACCTTGGGAACGTGGCTGTTATTTCAATTTAGAAGATGGCCCCTGTTaGATAAAGAATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: DVLNLLLQPWERGCYFNLEDGPC*IKNSSC
Trigger: GCATGAAGAATTCTTTATCAAACAGGGGCCATCTTC...TAAATTGAAATAACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS-3UTR CAA 90 bp GATATTTATTTGTGTGTGGCTAGAATGGGATGTTTTGAATCTTCTGTTACAACCTGGACTGGTAAGTATTaGAAGCCCATCCAGAATTGT +
Preference number: 5 (lower is better)
Translates to: DIYLCVARMGCFESSVTTWTGKY*KPIQNC
Trigger: ACAATTCTGGATGGGCTTCAAATACTTACCAGTCCA...GGTTGTAACAGAAGATTCAAAACATCCCATTCTAGCCACACACAAATAAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564079.6
CDS CAA 90 bp AGTGCTTCCCCTTCCACACGCGCACCGGCCCCTGGGTCGGGCGGTTaGTGCCGAATCAACCCACCGAGACAATCGCTGCGGCGGAGCGGA +
Preference number: 6 (lower is better)
Translates to: SASPSTRAPAPGSGG*CRINPPRQSLRRSG
Trigger: TCCGCTCCGCCGCAGCGATTGTCTCGGTGGGTTGATTCGGCACAAACCGCCCGACCCAGGGGCCGGTGCGCGTGTGGAAGGGGAAGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS GCA 72 bp GCGGTTTGTGCCGAATCAACCCACCGAGACAATCGCTaGGGCGGAGCGGACGGGAAGCTGGGAAGGGGTCGC +
Preference number: 6 (lower is better)
Translates to: AVCAESTHRDNR*GGADGKLGRGR
Trigger: GCGACCCCTTCCCAGCTTCCCGTCCGCTCCGCCGCAGCGATTGTCTCGGTGGGTTGATTCGGCACAAACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS GCA 72 bp GCTGCATACTTCCAGGCAGACGCACCTTCACGAGAATaGTCAGCTGGGCGGCTCCACGCTCATCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: AAYFQADAPSRE*SAGRLHAHPVG
Trigger: GCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGTGCGTCTGCCTGGAAGTATGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566251.1
CDS CCA 72 bp GACCCAGGGTACCCGCTCAGAGCCAAGAGCAGTTCGTaGATCATTCCCACGGCGGACCTCGAGTCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: DPGYPLRAKSSS*IIPTADLESLV
Trigger: AACCAGGGACTCGAGGTCCGCCGTGGGAATGATCCACGAACTGCTCTTGGCTCTGAGCGGGTACCCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS CCA 72 bp CTTCCAGGCAGACGCACCTTCACGAGAATGCTCAGCTaGGCGGCTCCACGCTCATCCAGTGGGCCTAGGTTC +
Preference number: 6 (lower is better)
Translates to: LPGRRTFTRMLS*AAPRSSSGPRF
Trigger: GAACCTAGGCCCACTGGATGAGCGTGGAGCCGCCCAGCTGAGCATTCTCGTGAAGGTGCGTCTGCCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566251.1
CDS CCA 72 bp AGTCTGTGCCGAGCCGGCAGAGTCGATTCAGGACACTaGTCTCACTGGGGTGGAGGAAAGGGAAGTCCTGCG +
Preference number: 6 (lower is better)
Translates to: SLCRAGRVDSGH*SHWGGGKGSPA
Trigger: CGCAGGACTTCCCTTTCCTCCACCCCAGTGAGACCAGTGTCCTGAATCGACTCTGCCGGCTCGGCACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
ENST00000570081.1
CDS TCA 72 bp CCTGCGATACCTGCAGGCCACTCCGCTTGTTCCAGGTaGAAATGGACCCAGGGTACCCGCTCAGAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: PAIPAGHSACSR*KWTQGTRSEPR
Trigger: TCTTGGCTCTGAGCGGGTACCCTGGGTCCATTTTCACCTGGAACAAGCGGAGTGGCCTGCAGGTATCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000563517.5
ENST00000564079.6
CDS CCA 72 bp CCCCCAATGCCCAGATCCTCCTCGTCCTCTTCTGGCTaGGCACTGACATTACCAGAAGATGGCCCCTGTTTG +
Preference number: 6 (lower is better)
Translates to: PPMPRSSSSSSG*ALTLPEDGPCL
Trigger: CAAACAGGGGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGACGAGGAGGATCTGGGCATTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS GCA 72 bp GCAGTTCTCTCAGTTGTTTTCCTGTCAGTCCCCCAATaGCCAGATCCTCCTCGTCCTCTTCTGGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: AVLSVVFLSVPQ*PDPPRPLLAGH
Trigger: GTGCCCAGCCAGAAGAGGACGAGGAGGATCTGGGCATTGGGGGACTGACAGGAAAACAACTGAGAGAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS GCA 72 bp TTCCCGGGGAGAAGTTTCCCGAGAAGGCCCTTCTCTTaGCTGAGTAGCATCTGCTTTGTGCTCCTTTCCGTG +
Preference number: 6 (lower is better)
Translates to: FPGRSFPRRPFS*LSSICFVLLSV
Trigger: CACGGAAAGGAGCACAAAGCAGATGCTACTCAGGCAAGAGAAGGGCCTTCTCGGGAAACTTCTCCCCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260383.11
ENST00000561691.5
CDS CAA 90 bp TGCTCACAGTTCTGCAGGCTGCACAGGAAGCACGGTGGCTTCAGCTaGGCTTCTAGGGAGGCCTCAGGAAACTTACAATCATGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: CSQFCRLHRKHGGFS*ASREASGNLQSWQK
Trigger: CTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCTAGAAGCCAAGCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGAACTGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS TCA 72 bp CTTAGACCCGCAGAGTGTCTTCCTGCCTCTGAGCTGTaGGTGTTGTTCCCTTTGCCCGGGATGCTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: LRPAECLPASEL*VLFPLPGMLLF
Trigger: AAACAAGAGCATCCCGGGCAAAGGGAACAACACTCACAGCTCAGAGGCAGGAAGACACTCTGCGGGTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS GCA 72 bp ACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTGGCTaGTGCTTGAGACGGTGCAGCTCTGCAGCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: TTCSKSTKLKSG*CLRRCSSAAKV
Trigger: CACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CCA 72 bp ATCCACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTaGCTGCTGCTTGAGACGGTGCAGCTCTGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: IHHLFKVHQAEE*LLLETVQLCSK
Trigger: TTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CCA 72 bp TCTGCAGGCTGCACAGGAAGCACGGTGGCTTCAGCTTaGCTTCTAGGGAGGCCTCAGGAAACTTACAATCAT +
Preference number: 6 (lower is better)
Translates to: SAGCTGSTVASA*LLGRPQETYNH
Trigger: ATGATTGTAAGTTTCCTGAGGCCTCCCTAGAAGCCAAGCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp TTCTGCAGGCTGCACAGGAAGCACGGTGGCTTCAGCTaGGCTTCTAGGGAGGCCTCAGGAAACTTACAATCA +
Preference number: 6 (lower is better)
Translates to: FCRLHRKHGGFS*ASREASGNLQS
Trigger: TGATTGTAAGTTTCCTGAGGCCTCCCTAGAAGCCAAGCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS GCA 72 bp TCCACCAAGCTGAAGAGTGGCTGCTGCTTGAGACGGTaGAGCTCTGCAGCAAAAGTGTCTTCCTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: STKLKSGCCLRR*SSAAKVSSWFF
Trigger: GAAAAACCAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS GCA 72 bp ACCTGTTCAAAGTCCACCAAGCTGAAGAGTGGCTGCTaGTTGAGACGGTGCAGCTCTGCAGCAAAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: TCSKSTKLKSGC*LRRCSSAAKVS
Trigger: AGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS GCA 72 bp TTCCCGGGGAGAAGTTTCCCGAGAAGGCCCTTCTCTTaGCTGAGTAGCATCTTTGTGCTCCTTTCCGTGATA +
Preference number: 6 (lower is better)
Translates to: FPGRSFPRRPFS*LSSIFVLLSVI
Trigger: TATCACGGAAAGGAGCACAAAGATGCTACTCAGGCAAGAGAAGGGCCTTCTCGGGAAACTTCTCCCCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562053.1
ENST00000563963.1
ENST00000564079.6
CDS GCA 72 bp ACCAAGGGGAATGGCGCTAAACCATTCATGAGAAACTaGTCCACGAACCAATCATCTCCCACCACGCCCCTA +
Preference number: 6 (lower is better)
Translates to: TKGNGAKPFMRN*STNQSSPTTPL
Trigger: TAGGGGCGTGGTGGGAGATGATTGGTTCGTGGAGCAGTTTCTCATGAATGGTTTAGCGCCATTCCCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp TTCCTCAATCAGGCGCAAGTCCTGCAGTTCTCTCAGTaGTTTTCCTGTCAGTCCCCCAATGCCCAGATCCTC +
Preference number: 6 (lower is better)
Translates to: FLNQAQVLQFSQ*FSCQSPNAQIL
Trigger: GAGGATCTGGGCATTGGGGGACTGACAGGAAAACAACTGAGAGAACTGCAGGACTTGCGCCTGATTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CAA 72 bp TGTTCAAAGTCCACCAAGCTGAAGAGTGGCTGCTGCTaGAGACGGTGCAGCTCTGCAGCAAAAGTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: CSKSTKLKSGCC*RRCSSAAKVSS
Trigger: GGAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS CAA 90 bp TCCACCACCTGTTCAAAGTCCACCAAGCTGAAGAGTGGCTGCTGCTaGAGACGGTGCAGCTCTGCAGCAAAAGTGTCTTCCTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: STTCSKSTKLKSGCC*RRCSSAAKVSSWFF
Trigger: GAAAAACCAGGAAGACACTTTTGCTGCAGAGCTGCACCGTCTCAAGCAGCAGCCACTCTTCAGCTTGGTGGACTTTGAACAGGTGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6
CDS GCA 72 bp CCAGAAGATGGCCCCTGTTTGATAAAGAATTCTTCATaGTGGTCCAAGAGGAGTCCATGGAGCATCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PEDGPCLIKNSS*WSKRSPWSIQA
Trigger: AGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS CCA 72 bp GAAGATGGCCCCTGTTTGATAAAGAATTCTTCATGCTaGTCCAAGAGGAGTCCATGGAGCATCCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: EDGPCLIKNSSC*SKRSPWSIQAE
Trigger: CTCAGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS TCA 72 bp CACAGAACAGTCAAGATCCAGCATCCTAAGGCAATTTaGTGTGGAGGTTCGCTGCAGATAGGAAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: HRTVKIQHPKAI*CGGSLQIGRGW
Trigger: CCATCCTCTTCCTATCTGCAGCGAACCTCCACATCAAATTGCCTTAGGATGCTGGATCTTGACTGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564511.1
CDS GCA 72 bp ATTAATGAAGAAAAGAGGTTGAGTTGCTCACAGTTCTaGAGGCTGCACAGGAAGCACGGTGGCTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: INEEKRLSCSQF*RLHRKHGGFSL
Trigger: CAAGCTGAAGCCACCGTGCTTCCTGTGCAGCCTGCAGAACTGTGAGCAACTCAACCTCTTTTCTTCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CCA 72 bp GTCCTCTTCTGGCTGGGCACTGACATTACCAGAAGATaGCCCCTGTTTGATAAAGAATTCTTCATGCTGGTC +
Preference number: 6 (lower is better)
Translates to: VLFWLGTDITRR*PLFDKEFFMLV
Trigger: GACCAGCATGAAGAATTCTTTATCAAACAGGGGCCATCTTCTGGTAATGTCAGTGCCCAGCCAGAAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS CCA 72 bp CACATAAGGACAGCATCTACCCATCACAGTAGTTCTTaGTTGTTTTCAGCCAGCCCTCTGGAGTGGCATCTA +
Preference number: 6 (lower is better)
Translates to: HIRTASTHHSSS*LFSASPLEWHL
Trigger: TAGATGCCACTCCAGAGGGCTGGCTGAAAACAACCAAGAACTACTGTGATGGGTAGATGCTGTCCTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 90 bp GCTGTAAAGAATACCTTAGACTGGGTAATTAATGAAGAAAAGAGGTaGAGTTGCTCACAGTTCTGCAGGCTGCACAGGAAGCACGGTGGC +
Preference number: 6 (lower is better)
Translates to: AVKNTLDWVINEEKR*SCSQFCRLHRKHGG
Trigger: GCCACCGTGCTTCCTGTGCAGCCTGCAGAACTGTGAGCAACTCAACCTCTTTTCTTCATTAATTACCCAGTCTAAGGTATTCTTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp GAGCTCCTTAAGGGCAGAGCCATGAATTATACCTCTTaGTATCCCCAGTGCCTTGCATACAGTAAGCACTCA +
Preference number: 6 (lower is better)
Translates to: ELLKGRAMNYTS*YPQCLAYSKHS
Trigger: TGAGTGCTTACTGTATGCAAGGCACTGGGGATACAAAGAGGTATAATTCATGGCTCTGCCCTTAAGGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS GCA 72 bp TATAGGCAACCAGTGCTCTCAGGAAACATCAGAGAATaGAAGTCACTGCCTACCAGCATCACCGTAAGAATT +
Preference number: 6 (lower is better)
Translates to: YRQPVLSGNIRE*KSLPTSITVRI
Trigger: AATTCTTACGGTGATGCTGGTAGGCAGTGACTTGCATTCTCTGATGTTTCCTGAGAGCACTGGTTGCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CCA 72 bp ATAAAGAATTCTTCATGCTGGTCCAAGAGGAGTCCATaGAGCATCCAGGCTGAGAGCTGTTTATACATGACC +
Preference number: 6 (lower is better)
Translates to: IKNSSCWSKRSP*SIQAESCLYMT
Trigger: GGTCATGTATAAACAGCTCTCAGCCTGGATGCTCCATGGACTCCTCTTGGACCAGCATGAAGAATTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563412.1
ENST00000564079.6
ENST00000564511.1
CDS CCA 72 bp GAAAGGCCACATTCACATCATGCTCAGTTACTGCAGTaGGTGGTGTTTTCAACATGTGTTGAGCTGTGTCAA +
Preference number: 6 (lower is better)
Translates to: ERPHSHHAQLLQ*VVFSTCVELCQ
Trigger: TTGACACAGCTCAACACATGTTGAAAACACCACCCACTGCAGTAACTGAGCATGATGTGAATGTGGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563963.1
ENST00000564079.6
CDS CCA 72 bp CGAACACTGGAGAGAATCTTGAACAGGAGTGAAGACTaGCGGCTAAAGCCAGGTTTCAATAGGATAAAGGAT +
Preference number: 6 (lower is better)
Translates to: RTLERILNRSED*RLKPGFNRIKD
Trigger: ATCCTTTATCCTATTGAAACCTGGCTTTAGCCGCCAGTCTTCACTCCTGTTCAAGATTCTCTCCAGTGTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563147.5
CDS CAA 72 bp ATAAGGACAGCATCTACCCATCACAGTAGTTCTTGGTaGTTTTCAGCCAGCCCTCTGGAGTGGCATCTATTA +
Preference number: 6 (lower is better)
Translates to: IRTASTHHSSSW*FSASPLEWHLL
Trigger: TAATAGATGCCACTCCAGAGGGCTGGCTGAAAACAACCAAGAACTACTGTGATGGGTAGATGCTGTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 90 bp CTAGGATTTCATTCAGGCAGTGAAACACCTACCCGGGAAACAGAGTaGGCATTAGGAAAGGAAGGAAGGTACATCCATGAAGTTAAAGTG +
Preference number: 6 (lower is better)
Translates to: LGFHSGSETPTRETE*ALGKEGRYIHEVKV
Trigger: CACTTTAACTTCATGGATGTACCTTCCTTCCTTTCCTAATGCCAACTCTGTTTCCCGGGTAGGTGTTTCACTGCCTGAATGAAATCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 90 bp CTATGCCACATAAGGACAGCATCTACCCATCACAGTAGTTCTTGGTaGTTTTCAGCCAGCCCTCTGGAGTGGCATCTATTAATATATATC +
Preference number: 6 (lower is better)
Translates to: LCHIRTASTHHSSSW*FSASPLEWHLLIYI
Trigger: GATATATATTAATAGATGCCACTCCAGAGGGCTGGCTGAAAACAACCAAGAACTACTGTGATGGGTAGATGCTGTCCTTATGTGGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS TCA 72 bp TTGTCATCATCTAGCAATACCTTGTGTGCTGACTGTTaGAAGGCCACATTCACATCATGCTCAGTTACTGCA +
Preference number: 6 (lower is better)
Translates to: LSSSSNTLCADC*KATFTSCSVTA
Trigger: TGCAGTAACTGAGCATGATGTGAATGTGGCCTTTCAACAGTCAGCACACAAGGTATTGCTAGATGATGACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000563963.1
ENST00000564079.6
CDS TCA 72 bp TTGTTTTTAATACCAGTTCAAGTCCCACTCTCTCAGTaGAGCACTCCCTTCCCCACTATAGCCTTTAGTGAA +
Preference number: 6 (lower is better)
Translates to: LFLIPVQVPLSQ*STPFPTIAFSE
Trigger: TTCACTAAAGGCTATAGTGGGGAAGGGAGTGCTTCACTGAGAGAGTGGGACTTGAACTGGTATTAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp AATACCTTAGACTGGGTAATTAATGAAGAAAAGAGGTaGAGTTGCTCACAGTTCTGCAGGCTGCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: NTLDWVINEEKR*SCSQFCRLHRK
Trigger: CTTCCTGTGCAGCCTGCAGAACTGTGAGCAACTCAACCTCTTTTCTTCATTAATTACCCAGTCTAAGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp GAACCCTCGTTTCTTGCTTCTTTATTATCTGTACTGTaGTCCACTTGGCAATTGTTCAGGCCTCTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: EPSFLASLLSVL*STWQLFRPLCC
Trigger: ACAACACAGAGGCCTGAACAATTGCCAAGTGGACAACAGTACAGATAATAAAGAAGCAAGAAACGAGGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp GTTTCTTGCTTCTTTATTATCTGTACTGTTGTCCACTaGGCAATTGTTCAGGCCTCTGTGTTGTTACTGATT +
Preference number: 6 (lower is better)
Translates to: VSCFFIICTVVH*AIVQASVLLLI
Trigger: AATCAGTAACAACACAGAGGCCTGAACAATTGCCAAGTGGACAACAGTACAGATAATAAAGAAGCAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS TCA 72 bp AAACAACCAACAAAACAGGGACAAATTTCATTACAGTaGGAACTCCTGCAAAGAATGGTTCCATACAAATCC +
Preference number: 6 (lower is better)
Translates to: KQPTKQGQISLQ*ELLQRMVPYKS
Trigger: GGATTTGTATGGAACCATTCTTTGCAGGAGTTCTCACTGTAATGAAATTTGTCCCTGTTTTGTTGGTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563963.1
CDS CAA 72 bp TTTCAAAATGGATCCTTTTCTAGTCAGGTTCACATTTaGATTCTCAAACATCTGGACAGATTCTCCAACAAA +
Preference number: 6 (lower is better)
Translates to: FQNGSFSSQVHI*ILKHLDRFSNK
Trigger: TTTGTTGGAGAATCTGTCCAGATGTTTGAGAATCAAAATGTGAACCTGACTAGAAAAGGATCCATTTTGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260383.11
ENST00000561691.5
ENST00000564079.6