Pregenerated sensors for TTTY12 (Homo sapiens)
Ensembl gene IDs: ENSG00000237048Ensembl transcript IDs: ENST00000413466.3, ENST00000651670.1, ENST00000653671.1, ENST00000664089.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTTTCAGGAAGGCTTTGTGACGTGTCTCTGGGTCTATCATCTAGGTaGTGTGACTTTCTTCTTAGTCCTGTACACATGAAGCACTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: LSGRLCDVSLGLSSR*CDFLLSPVHMKHCD Trigger: GTCACAGTGCTTCATGTGTACAGGACTAAGAAGAAAGTCACATCACCTAGATGATAGACCCAGAGACACGTCACAAAGCCTTCCTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS GCA 90 bp | TATGAGTCTCTTCTTCTGTCTGGACACTGCCCACAATGGGCATTGTaGCATATTCCTGTCTTTAACCCCCAAGTTATGCAACTTTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: YESLLLSGHCPQWAL*HIPVFNPQVMQLFC Trigger: GCAGAAAAGTTGCATAACTTGGGGGTTAAAGACAGGAATATGGCACAATGCCCATTGTGGGCAGTGTCCAGACAGAAGAAGAGACTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000653671.1 |
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| CDS TCA 90 bp | CCTGCACACTTGAATAATGACATATTGCTAGACCAGGTACAAAGGTaGTTGTACTATTTTGCCAGGGCCATGCTTTCAGGAAGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: PAHLNNDILLDQVQR*LYYFARAMLSGRLC Trigger: ACAAAGCCTTCCTGAAAGCATGGCCCTGGCAAAATAGTACAATCACCTTTGTACCTGGTCTAGCAATATGTCATTATTCAAGTGTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS CCA 90 bp | TCTAAGGGGACTTGTGAATATCTCAGAACTCAGAACCAGATGATGTaGCAATTCATCCTCGTTTCTTTGGCCCATTCTGTAGGTGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SKGTCEYLRTQNQMM*QFILVSLAHSVGVL Trigger: CAAAACACCTACAGAATGGGCCAAAGAAACGAGGATGAATTGCCACATCATCTGGTTCTGAGTTCTGAGATATTCACAAGTCCCCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664089.1 |
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| CDS TCA 90 bp | GTTAACAGGGGGAATCTTGATAAATCACTAAAATCGGCATCCTGGTaGTTTGACTCTTCTTCCATTGTCCTGGTCCTTTCAACAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: VNRGNLDKSLKSASW*FDSSSIVLVLSTGY Trigger: GTATCCTGTTGAAAGGACCAGGACAATGGAAGAAGAGTCAAATCACCAGGATGCCGATTTTAGTGATTTATCAAGATTCCCCCTGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000651670.1 ENST00000653671.1 |
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| CDS GCA 90 bp | AATTGTGACATCACTGGATCTAGAATGCAAGTGACATTACATTCCTaGCTGCCCATTCTCACAGACATCATAGTGATATATCACTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: NCDITGSRMQVTLHS*LPILTDIIVIYHWV Trigger: GACCCAGTGATATATCACTATGATGTCTGTGAGAATGGGCAGGCAGGAATGTAATGTCACTTGCATTCTAGATCCAGTGATGTCACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS CCA 90 bp | ATCCTCGTTTCTGGTCCTTTCAACAGGATACATTGTGACATATTCTaGGTTTGTCATTTAGGTGATATGAGTCTCTTCTTCTGTCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: ILVSGPFNRIHCDIF*VCHLGDMSLFFCLD Trigger: GTCCAGACAGAAGAAGAGACTCATATCACCTAAATGACAAACCCAGAATATGTCACAATGTATCCTGTTGAAAGGACCAGAAACGAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413466.3 |
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| CDS CCA 90 bp | TTCCATTGTCCTGGTCCTTTCAACAGGATACATTGTGACATATTCTaGGTTTGTCATTTAGGTGATATGAGTCTCTTCTTCTGTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FHCPGPFNRIHCDIF*VCHLGDMSLFFCLD Trigger: GTCCAGACAGAAGAAGAGACTCATATCACCTAAATGACAAACCCAGAATATGTCACAATGTATCCTGTTGAAAGGACCAGGACAATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651670.1 ENST00000653671.1 |
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| CDS GCA 72 bp | CTTCTTCTGTCTGGACACTGCCCACAATGGGCATTGTaGCATATTCCTGTCTTTAACCCCCAAGTTATGCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLSGHCPQWAL*HIPVFNPQVMQ Trigger: TTGCATAACTTGGGGGTTAAAGACAGGAATATGGCACAATGCCCATTGTGGGCAGTGTCCAGACAGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000653671.1 |
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| CDS CCA 72 bp | TATGAGTCTCTTCTTCTGTCTGGACACTGCCCACAATaGGCATTGTGCCATATTCCTGTCTTTAACCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: YESLLLSGHCPQ*ALCHIPVFNPQ Trigger: TTGGGGGTTAAAGACAGGAATATGGCACAATGCCCATTGTGGGCAGTGTCCAGACAGAAGAAGAGACTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000653671.1 |
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| CDS CCA 72 bp | CTTGGGCCAACCTGTAAAAGATATGACTCTTCTGACTaGGCTCTGCCCTCAGTAAGAATTGTGACATCACTG | + |
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Preference number: 6 (lower is better) Translates to: LGPTCKRYDSSD*ALPSVRIVTSL Trigger: CAGTGATGTCACAATTCTTACTGAGGGCAGAGCCCAGTCAGAAGAGTCATATCTTTTACAGGTTGGCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS CAA 72 bp | TCTCTTCTTCTGTCTGGACACTGCCCACAATGGGCATaGTGCCATATTCCTGTCTTTAACCCCCAAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: SLLLSGHCPQWA*CHIPVFNPQVM Trigger: CATAACTTGGGGGTTAAAGACAGGAATATGGCACAATGCCCATTGTGGGCAGTGTCCAGACAGAAGAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000653671.1 |
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| CDS GCA 72 bp | TGGCTGACAGTAAGGACTTTCATCATCACAGATGAATaGAGGCAACTCTCCTTCCTAATCCCTGTTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: WLTVRTFIITDE*RQLSFLIPVNR Trigger: CCTGTTAACAGGGATTAGGAAGGAGAGTTGCCTGCATTCATCTGTGATGATGAAAGTCCTTACTGTCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653671.1 |
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| CDS TCA 72 bp | AGGGGACTTGTGAATATCTCAGAACTCAGAACCAGATaGTGTGGCAATTCATCCTCGTTTCTGGTCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RGLVNISELRTR*CGNSSSFLVLS Trigger: TGAAAGGACCAGAAACGAGGATGAATTGCCACATCATCTGGTTCTGAGTTCTGAGATATTCACAAGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413466.3 |
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| CDS TCA 72 bp | AGGCTTTGTGACGTGTCTCTGGGTCTATCATCTAGGTaGTGTGACTTTCTTCTTAGTCCTGTACACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLCDVSLGLSSR*CDFLLSPVHMK Trigger: CTTCATGTGTACAGGACTAAGAAGAAAGTCACATCACCTAGATGATAGACCCAGAGACACGTCACAAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS TCA 72 bp | AGGGGACTTGTGAATATCTCAGAACTCAGAACCAGATaGTGTGGCAATTCATCCTCGTTTCTTCCTAATCCC | + |
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Preference number: 6 (lower is better) Translates to: RGLVNISELRTR*CGNSSSFLPNP Trigger: GGGATTAGGAAGAAACGAGGATGAATTGCCACATCATCTGGTTCTGAGTTCTGAGATATTCACAAGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651670.1 |
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| CDS TCA 72 bp | AGGGGACTTGTGAATATCTCAGAACTCAGAACCAGATaGTGTGGCAATTCATCCTCGTTTCTTTGGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: RGLVNISELRTR*CGNSSSFLWPI Trigger: AATGGGCCAAAGAAACGAGGATGAATTGCCACATCATCTGGTTCTGAGTTCTGAGATATTCACAAGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664089.1 |
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| CDS TCA 72 bp | CACTTGGCTGACAGTAAGGACTTTCATCATCACAGATaGATGCAGGCAACTCTCCTACATGAAAACAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HLADSKDFHHHR*MQATLLHENKR Trigger: TCTCTTGTTTTCATGTAGGAGAGTTGCCTGCATTCATCTGTGATGATGAAAGTCCTTACTGTCAGCCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000664089.1 |
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| CDS TCA 72 bp | GGGAATCTTGATAAATCACTAAAATCGGCATCCTGGTaGTTTGACTCTTCTTCCATTGTCCTGGTCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GNLDKSLKSASW*FDSSSIVLVLS Trigger: TGAAAGGACCAGGACAATGGAAGAAGAGTCAAATCACCAGGATGCCGATTTTAGTGATTTATCAAGATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651670.1 ENST00000653671.1 |
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| CDS CCA 72 bp | GCAAACAGAGGAAATTGTGAGTCTCATATGCACACTTaGCTGACAGTAAGGACTTTCATCATCACAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: ANRGNCESHMHT*LTVRTFIITDE Trigger: TTCATCTGTGATGATGAAAGTCCTTACTGTCAGCCAAGTGTGCATATGAGACTCACAATTTCCTCTGTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000413466.3 ENST00000651670.1 ENST00000653671.1 ENST00000664089.1 |
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| CDS CCA 72 bp | CCTGGTCCTTTCAACAGGATACATTGTGACATATTCTaGGTTTGTCATTTAGGTGATATGAGTCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGPFNRIHCDIF*VCHLGDMSLFF Trigger: GAAGAAGAGACTCATATCACCTAAATGACAAACCCAGAATATGTCACAATGTATCCTGTTGAAAGGACCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651670.1 ENST00000653671.1 |
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| CDS CCA 72 bp | TCTGGTCCTTTCAACAGGATACATTGTGACATATTCTaGGTTTGTCATTTAGGTGATATGAGTCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGPFNRIHCDIF*VCHLGDMSLFF Trigger: GAAGAAGAGACTCATATCACCTAAATGACAAACCCAGAATATGTCACAATGTATCCTGTTGAAAGGACCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413466.3 |
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