Pregenerated sensors for TTPA (Homo sapiens)
Ensembl gene IDs: ENSG00000137561Ensembl transcript IDs: ENST00000260116.5, ENST00000521138.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGTAATCCCAGGACTCTaGGAGGCCGAAGCAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAVIPGL*EAEAGK Trigger: TTTGCCTGCTTCGGCCTCCCAGAGTCCTGGGATTAC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGAGGTTGCAGTGAGCTaGGATCTCACTACTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAEVAVS*DLTTAL Trigger: GAGTGCAGTAGTGAGATCTCAGCTCACTGCAACCTC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCTGAGATCTCACTACTaGACTCTAGCCTGGGCGACA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALRSHY*TLAWAT Trigger: TGTCGCCCAGGCTAGAGTGCAGTAGTGAGATCTCAG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTTGAGTTCAGGAGTTTaGGACCAGCTTGGCCAACGT | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALSSGV*DQLGQR Trigger: ACGTTGGCCAAGCTGGTCTCAAACTCCTGAACTCAA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCCAGGAGTGGTGGTGTaGACATGTAATCCTAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAPGVVV*TCNPSR Trigger: TCTGCTAGGATTACATGTGCACACCACCACTCCTGG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAATCCTAGCAGAGGTTaGAGTGAGCTGAGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSANPSRG*SELRSH Trigger: GTGAGATCTCAGCTCACTGCAACCTCTGCTAGGATT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCTTAGCCAGGAGTGGTaGTGTGCACATGTAATCCTA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALSQEW*CAHVIL Trigger: TAGGATTACATGTGCACACCACCACTCCTGGCTAAG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAGCAGGCAAATTACTTaGGTTCAGGAGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSASRQIT*VQEFET Trigger: GGTCTCAAACTCCTGAACTCAAGTAATTTGCCTGCT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAAACTTAGCCAGGAGTaGTGGTGTGCACATGTAATC | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAKLSQE*WCAHVI Trigger: GATTACATGTGCACACCACCACTCCTGGCTAAGTTT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGATGAAATGTCTTGCTaGTCCACAGGAATAACCATA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSADEMSC*STGITI Trigger: TATGGTTATTCCTGTGGACCAGCAAGACATTTCATC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTATACAAAGATGCACATaGGCAGCTACTTTAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAIQRCT*AATLAI Trigger: TATTGCTAAAGTAGCTGCTCATGTGCATCTTTGTAT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGAGTTTGAGACCAGCTaGGCCAACGTGGCAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAEFETS*ANVAKP Trigger: GGGTTTTGCCACGTTGGCCAAGCTGGTCTCAAACTC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTTCCAAACACCTGTGTaGCTCATGTCAGAAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAFQTPV*LMSEDF Trigger: GAAATCTTCTGACATGAGCAACACAGGTGTTTGGAA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGGTCCGGTAGCGCGTTaGGCTGCGGCCCCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAGPVAR*AAAPPR Trigger: CCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGCAGGAAGGAGTCGGTaGGCGGCAGCGGCGCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAAGRSR*AAAARA Trigger: CGCTCGCGCCGCTGCCGCTCACCGACTCCTTCCTGC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCTGGGATCGCGCCTCTaGCATGCCCGCCGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALGSRL*HARRRC Trigger: GCAGCGGCGGCGGGCATGGCAGAGGCGCGATCCCAG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGGTAGCGCGTTGAGCTaGGGCCCCGCCGAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAGSALS*GPAEGW Trigger: CCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGGCCCCGCCGAGGGCTaGGATCGCGCCTCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAGPAEG*DRASAM Trigger: CATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGCCGCCAGGCCCGGCTaGAGCAACGGAGAGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAAARPG*SNGEWS Trigger: GGACCACTCTCCGTTGCTGCAGCCGGGCCTGGCGGC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTGCAGCAACGGAGAGTaGTCCGGTAGCGCGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSACSNGE*SGSALS Trigger: GCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTGCCAGTGGGATCCCTaGATCTCAGGACTCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSACQWDP*ISGLHG Trigger: ACCATGGAGTCCTGAGATCCAGGGATCCCACTGGCA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCTGTATTGCCCAGGCTaGTCTAGAACTCCTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALYCPG*SRTPAL Trigger: GAGCGCAGGAGTTCTAGACCAGCCTGGGCAATACAG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGAACTTTGCTGCCAGTaGGATCCCTGGATCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAELCCQ*DPWISG Trigger: TCCTGAGATCCAGGGATCCCACTGGCAGCAAAGTTC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTTGATTCCATTCCGCTaGGTTTCTACCTCCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALIPFR*VSTSCT Trigger: TGTACAGGAGGTAGAAACTCAGCGGAATGGAATCAA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTATAGACTCCTCAGCTaGAAGTTTCTATCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAYRLLS*KFLSRP Trigger: TGGCCGTGATAGAAACTTTCAGCTGAGGAGTCTATA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTATGCAAAGCAGATATTaGGAAGCCATCAACTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAMQSRY*EAINCA Trigger: GGCACAGTTGATGGCTTCTCAATATCTGCTTTGCAT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCAGTCAGGAATGGTTTaGTCATGGAAAAGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAQSGMV*SWKRQH Trigger: ATGCTGTCTTTTCCATGATCAAACCATTCCTGACTG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTTTGGGGTCCCAGTGTaGGATTCTGTAAATAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAFGVPV*DSVNKN Trigger: GTTCTTATTTACAGAATCGCACACTGGGACCCCAAA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCTTCTTGGCTACGGATaGAGTGATTTGAAAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSALLGYG*SDLKSM Trigger: CATGCTTTTCAAATCACTCCATCCGTAGCCAAGAAG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGACAAATGTCCTCCATaGAGAATTCTTCACCACCAT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSADKCPP*RILHHH Trigger: ATGGTGGTGAAGAATTCTCCATGGAGGACATTTGTC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCCACATAGAGTAGTATaGCATATAGACTCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAPHRVV*HIDSSA Trigger: AGCTGAGGAGTCTATATGCCATACTACTCTATGTGG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAACTTTCAATGGAAATaGATCCGTAAGTACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSANFQWK*IRKYSS Trigger: GCTGCTGTACTTACGGATTCATTTCCATTGAAAGTT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTCTCAGAAATGCTGCTaGGATAATCTTCAGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSASQKCC*DNLQTS Trigger: TGAAGTCTGAAGATTATCTCAGCAGCATTTCTGAGA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTGACATAACTTCTCATTaGATGCTCTCAGAAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSADITSH*MLSEML Trigger: CAGCATTTCTGAGAGCATTCAATGAGAAGTTATGTC...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAGGAAGCCATTCACATaGCATAACTTCTCATTGAAT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSARKPFT*HNFSLN Trigger: ATTCAATGAGAAGTTATGTCATGTGAATGGCTTCCT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAGAAGCCATCAACTGTaGCTGACGTATTTTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSARSHQL*LTYFLN Trigger: ATTTAGAAAATACGTCAGGCACAGTTGATGGCTTCT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTCATTTATCAAATGGATaGCACGAACTTTCAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAHLSNG*HELSME Trigger: TTCCATTGAAAGTTCGTGGCATCCATTTGATAAATG...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTTTTTCAGTCAGGAATaGTTTGATCATGGAAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAFFSQE*FDHGKD Trigger: GTCTTTTCCATGATCAAACCATTCCTGACTGAAAAA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS CCA 90 bp | GCCCGGCGCCGCAGCGCCGCCAGGCCCGGCTGCAGCAACGGAGAGTaGTCCGGTAGCGCGTTGAGCTGCGGCCCCGCCGAGGGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: ARRRSAARPGCSNGE*SGSALSCGPAEGWD Trigger: ATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGGCCTGGCGGCGCTGCGGCGCCGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS CCA 90 bp | GGAGAGTGGTCCGGTAGCGCGTTGAGCTGCGGCCCCGCCGAGGGCTaGGATCGCGCCTCTGCCATGCCCGCCGCCGCTGCTGCGGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GEWSGSALSCGPAEG*DRASAMPAAAAAAA Trigger: TGCGGCCGCAGCAGCGGCGGCGGGCATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS TCA 90 bp | CCGCCAGGCCCGGCTGCAGCAACGGAGAGTGGTCCGGTAGCGCGTTaGGCTGCGGCCCCGCCGAGGGCTGGGATCGCGCCTCTGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: PPGPAAATESGPVAR*AAAPPRAGIAPLPC Trigger: GCATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGGCCTGGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS TCA 90 bp | GATCGAAATCCCGGGCGCGCAGGAACCGCAGCAGGAAGGAGTCGGTaGGCGGCAGCGGCGCGAGCGGGACGCCAGCTTCCCGGGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: DRNPGRAGTAAGRSR*AAAARAGRQLPGPG Trigger: GCCGGGCCCGGGAAGCTGGCGTCCCGCTCGCGCCGCTGCCGCTCACCGACTCCTTCCTGCTGCGGTTCCTGCGCGCCCGGGATTTCGATC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS GCA 90 bp | AGGCCCGGCTGCAGCAACGGAGAGTGGTCCGGTAGCGCGTTGAGCTaGGGCCCCGCCGAGGGCTGGGATCGCGCCTCTGCCATGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RPGCSNGEWSGSALS*GPAEGWDRASAMPA Trigger: GGCGGGCATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTTGGTCCGGTAGCGCGTaGAGCTGCGGCCCCGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAWSGSA*SCGPAE Trigger: CTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCA...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTACAGCAGCAATCTTCTaGGCTACGGATGGAGTGATT | + |
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Preference number: 5 (lower is better) Translates to: HRDLKMPHRVVWHIDSSATAAIF*ATDGVI Trigger: AATCACTCCATCCGTAGCCAAGAAGATTGCTGCTGT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS TCA 90 bp | AACTGCCAACCTTCCAGATCAAAGATAGCCTTGATTCCATTCCGCTaGGTTTCTACCTCCTGTACAATAAGCTCGGATGTGATTAGACTT | + |
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Preference number: 5 (lower is better) Translates to: NCQPSRSKIALIPFR*VSTSCTISSDVIRL Trigger: AAGTCTAATCACATCCGAGCTTATTGTACAGGAGGTAGAAACTCAGCGGAATGGAATCAAGGCTATCTTTGATCTGGAAGGTTGGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTATGCTGAAGCAAGCTTaGTTTGTAGTTGTTCCCATG | + |
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Preference number: 5 (lower is better) Translates to: HRDLKMPHRVVWHIDSSAMLKQA*FVVVPM Trigger: CATGGGAACAACTACAAACAAAGCTTGCTTCAGCAT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAATGCAAAGCAGATATaGAGAAGCCATCAACTGTGC | + |
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Preference number: 5 (lower is better) Translates to: HRDLKMPHRVVWHIDSSANAKQI*RSHQLC Trigger: GCACAGTTGATGGCTTCTCAATATCTGCTTTGCATT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGACCTAAAGATGCCACATAGAGTAGTATGGCATATAGACTCCTCAGCTAGGGCTATGTTGAATTaGAAAGCTGAGATGATATCT | + |
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Preference number: 5 (lower is better) Translates to: HRDLKMPHRVVWHIDSSARAMLN*KAEMIS Trigger: AGATATCATCTCAGCTTTCAAATTCAACATAGCCCT...AGCTGAGGAGTCTATATGCCATACTACTCTATGTGGCATCTTTAGGTCTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS TCA 90 bp | AGGTTGGATATCACTCATGTATTTTTAGTTAGGAAGCCATTCACATaGCATAACTTCTCATTGAATGCTCTCAGAAATGCTGCTGAGATA | + |
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Preference number: 5 (lower is better) Translates to: RLDITHVFLVRKPFT*HNFSLNALRNAAEI Trigger: TATCTCAGCAGCATTTCTGAGAGCATTCAATGAGAAGTTATGTCATGTGAATGGCTTCCTAACTAAAAATACATGAGTGATATCCAACCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS GCA 72 bp | TCCCGGGCCCGGCGCCGCAGCGCCGCCAGGCCCGGCTaGAGCAACGGAGAGTGGTCCGGTAGCGCGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRARRRSAARPG*SNGEWSGSALS Trigger: GCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGGCCTGGCGGCGCTGCGGCGCCGGGCCCGGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS CCA 72 bp | TCCGGTAGCGCGTTGAGCTGCGGCCCCGCCGAGGGCTaGGATCGCGCCTCTGCCATGCCCGCCGCCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGSALSCGPAEG*DRASAMPAAAA Trigger: AGCAGCGGCGGCGGGCATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS CAA 72 bp | CCCGGCTGCAGCAACGGAGAGTGGTCCGGTAGCGCGTaGAGCTGCGGCCCCGCCGAGGGCTGGGATCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PGCSNGEWSGSA*SCGPAEGWDRA Trigger: GGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS CAA 90 bp | GCCGCCAGGCCCGGCTGCAGCAACGGAGAGTGGTCCGGTAGCGCGTaGAGCTGCGGCCCCGCCGAGGGCTGGGATCGCGCCTCTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: AARPGCSNGEWSGSA*SCGPAEGWDRASAM Trigger: CATGGCAGAGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGGGCCTGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS TCA 72 bp | CCGGCTGCAGCAACGGAGAGTGGTCCGGTAGCGCGTTaGGCTGCGGCCCCGCCGAGGGCTGGGATCGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PAAATESGPVAR*AAAPPRAGIAP Trigger: AGGCGCGATCCCAGCCCTCGGCGGGGCCGCAGCTCAACGCGCTACCGGACCACTCTCCGTTGCTGCAGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260116.5 ENST00000521138.1 |
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| CDS GCA 72 bp | GGAGGCGGAGGTTGCGGTGAGCTGAGATCACGCCATTaGACTCCAGCCCGCCAGGCCAGGTCCAGATCGAAA | + |
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Preference number: 6 (lower is better) Translates to: GGGGCGELRSRH*TPARQARSRSK Trigger: TTTCGATCTGGACCTGGCCTGGCGGGCTGGAGTGCAATGGCGTGATCTCAGCTCACCGCAACCTCCGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521138.1 |
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| CDS TCA 72 bp | CCTTCCAGATCAAAGATAGCCTTGATTCCATTCCGCTaGGTTTCTACCTCCTGTACAATAAGCTCGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: PSRSKIALIPFR*VSTSCTISSDV Trigger: CACATCCGAGCTTATTGTACAGGAGGTAGAAACTCAGCGGAATGGAATCAAGGCTATCTTTGATCTGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS CCA 72 bp | ATCCGTAAGTACAGCAGCAATCTTCTTGGCTACGGATaGAGTGATTTGAAAAGCATGAGAAAACTGCCAACC | + |
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Preference number: 6 (lower is better) Translates to: IRKYSSNLLGYG*SDLKSMRKLPT Trigger: GGTTGGCAGTTTTCTCATGCTTTTCAAATCACTCCATCCGTAGCCAAGAAGATTGCTGCTGTACTTACGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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| CDS TCA 72 bp | ATCACTCATGTATTTTTAGTTAGGAAGCCATTCACATaGCATAACTTCTCATTGAATGCTCTCAGAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: ITHVFLVRKPFT*HNFSLNALRNA Trigger: AGCATTTCTGAGAGCATTCAATGAGAAGTTATGTCATGTGAATGGCTTCCTAACTAAAAATACATGAGTGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260116.5 |
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