Pregenerated sensors for TTLL7-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000233061

Ensembl transcript IDs: ENST00000455929.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCTTGTGTGCTGAGTCTGCCTCCGGGTGGAGGCCACAGGACCAGTTaGGTCAGGAGTCGAGGGTCCAGGTGGAGTCACCCAACAGTCAGA	+
Preference number: 5 (lower is better) Translates to: PCVLSLPPGGGHRTS*VRSRGSRWSHPTVR Trigger: TCTGACTGTTGGGTGACTCCACCTGGACCCTCGACTCCTGACTCAACTGGTCCTGTGGCCTCCACCCGGAGGCAGACTCAGCACACAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS CCA 90 bp	ATGCCTGTGATCTTGCAATTTGGAAGGCCGACGCAGGAAGAGAGCTaGAGCCCAGAGTTTGAGACCGGCCAGGGCAATATAATGAGACTT	+
Preference number: 5 (lower is better) Translates to: MPVILQFGRPTQEES*SPEFETGQGNIMRL Trigger: AAGTCTCATTATATTGCCCTGGCCGGTCTCAAACTCTGGGCTCCAGCTCTCTTCCTGCGTCGGCCTTCCAAATTGCAAGATCACAGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS CCA 90 bp	AATAATTGGGTAAGTCACAAATCTTTTAATATCCGGATCAATGGCTaGTTGTTGTTTAACTACACCTACATTTTAGCACAATGCAGGCCC	+
Preference number: 5 (lower is better) Translates to: NNWVSHKSFNIRING*LLFNYTYILAQCRP Trigger: GGGCCTGCATTGTGCTAAAATGTAGGTGTAGTTAAACAACAACCAGCCATTGATCCGGATATTAAAAGATTTGTGACTTACCCAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS TCA 72 bp	CTGAGTCTGCCTCCGGGTGGAGGCCACAGGACCAGTTaGGTCAGGAGTCGAGGGTCCAGGTGGAGTCACCCA	+
Preference number: 6 (lower is better) Translates to: LSLPPGGGHRTS*VRSRGSRWSHP Trigger: TGGGTGACTCCACCTGGACCCTCGACTCCTGACTCAACTGGTCCTGTGGCCTCCACCCGGAGGCAGACTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS CCA 72 bp	ATCTTGCAATTTGGAAGGCCGACGCAGGAAGAGAGCTaGAGCCCAGAGTTTGAGACCGGCCAGGGCAATATA	+
Preference number: 6 (lower is better) Translates to: ILQFGRPTQEES*SPEFETGQGNI Trigger: TATATTGCCCTGGCCGGTCTCAAACTCTGGGCTCCAGCTCTCTTCCTGCGTCGGCCTTCCAAATTGCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS GCA 72 bp	TCGAGGGTCCAGGTGGAGTCACCCAACAGTCAGAAATaGAGAAGTCTGAAAAACATCTCAAAAGGCCAATCT	+
Preference number: 6 (lower is better) Translates to: SRVQVESPNSQK*RSLKNISKGQS Trigger: AGATTGGCCTTTTGAGATGTTTTTCAGACTTCTGCATTTCTGACTGTTGGGTGACTCCACCTGGACCCTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS CCA 72 bp	GGGCTTCACAAACACCACAGTGAATCTAAGTACTCTTaGGGTAATCCCGAGAAGGCTTTTGATGGTGCGAAA	+
Preference number: 6 (lower is better) Translates to: GLHKHHSESKYS*GNPEKAFDGAK Trigger: TTTCGCACCATCAAAAGCCTTCTCGGGATTACCCCAAGAGTACTTAGATTCACTGTGGTGTTTGTGAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455929.1
CDS CAA 72 bp	CACAAATCTTTTAATATCCGGATCAATGGCTGGTTGTaGTTTAACTACACCTACATTTTAGCACAATGCAGG	+
Preference number: 6 (lower is better) Translates to: HKSFNIRINGWL*FNYTYILAQCR Trigger: CCTGCATTGTGCTAAAATGTAGGTGTAGTTAAACAACAACCAGCCATTGATCCGGATATTAAAAGATTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455929.1

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