RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTLL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000135912

Ensembl transcript IDs: ENST00000258398.8, ENST00000392102.6, ENST00000415717.5, ENST00000417196.5, ENST00000417855.1, ENST00000424644.1, ENST00000434241.1, ENST00000436668.5, ENST00000437755.1, ENST00000442769.5, ENST00000448224.1, ENST00000457313.5, ENST00000461181.1, ENST00000465558.5, ENST00000467841.5, ENST00000472527.1, ENST00000475950.5, ENST00000480472.5, ENST00000480929.1, ENST00000491899.1, ENST00000494428.5

Found 1049 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTaGGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: DRKWVRHVVASPPVY*GSSRVSPQDSGGRG
Trigger: CCCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 90 bp AAATACTCTGAGGAGGGACAGGGTGAAAGGGGTAGGGGGTCAGACTaGTCTGAACAGCAGGCTGGTTCCCGTGAGGTAGCTGATGCCCAT +
Preference number: 1 (lower is better)
Translates to: KYSEEGQGERGRGSD*SEQQAGSREVADAH
Trigger: ATGGGCATCAGCTACCTCACGGGAACCAGCCTGCTGTTCAGACCAGTCTGACCCCCTACCCCTTTCACCCTGTCCCTCCTCAGAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
3UTR TCA 90 bp AAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCAGGCAGACAGGTGACAGAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: KTCFIRLRGHHWLLC*DMRCQPGRQVTEGD
Trigger: GTCACCCTCTGTCACCTGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
3UTR TCA 90 bp CAGGGTGGGTATTTGGAAGGAGGCGGTGAAGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTA +
Preference number: 1 (lower is better)
Translates to: QGGYLEGGGEDPRLG*QEMGSACCGLSACL
Trigger: TAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAATACCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 90 bp GAAGACCTAGGGCTGCTGGCAGGGTGGGTATTTGGAAGGAGGCGGTaGAGACCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTG +
Preference number: 1 (lower is better)
Translates to: EDLGLLAGWVFGRRR*RPKTRMTGNGFGML
Trigger: CAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAATACCCACCCTGCCAGCAGCCCTAGGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 90 bp CCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATaGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTG +
Preference number: 1 (lower is better)
Translates to: PHLLPPSPWTVSFDT*RQVTATGIIWAPSL
Trigger: CAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 90 bp TTTGGAGAGAGGCCAGTTATGGGCTCACAGCCAGGAGGGAGTCACTaGTTGACTGGAAAGTGGAGGAAGCAGAAAGTCTTGAAGTCTGCC +
Preference number: 1 (lower is better)
Translates to: FGERPVMGSQPGGSH*LTGKWRKQKVLKSA
Trigger: GGCAGACTTCAAGACTTTCTGCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACTGGCCTCTCTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
3UTR GCA 90 bp AGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTaGACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGACT +
Preference number: 1 (lower is better)
Translates to: RPCLLHSRTLRNHVC*TIEKPHLLPPSPWT
Trigger: AGTCCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 90 bp GTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTaGACTGTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGG +
Preference number: 1 (lower is better)
Translates to: VCCTIEKPHLLPPSP*TVSFDTWRQVTATG
Trigger: CCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 90 bp CAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATaGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAA +
Preference number: 1 (lower is better)
Translates to: QVTATGIIWAPSLGP*EIHKVHRPSHTSEK
Trigger: TTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 90 bp CATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGTGACATAAAC +
Preference number: 1 (lower is better)
Translates to: HGRRILATGKADQSI*KEVNPQRIVGSDIN
Trigger: GTTTATGTCACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
3UTR GCA 90 bp CAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGCATTCTTTTTATTGACACTGTAGTT +
Preference number: 1 (lower is better)
Translates to: QSLQCPFVALASHFI*IGLVLGILFIDTVV
Trigger: AACTACAGTGTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGTTCATAGA +
Preference number: 1 (lower is better)
Translates to: VSFDTWRQVTATGII*APSLGPWEIHKVHR
Trigger: TCTATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGACAGGTGACAGAGGGTaGCCCTTCCTCACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRTGDRG*PFLTFS
Trigger: GGAGAAGGTGAGGAAGGGTCACCCTCTGTCACCTGT...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: QEMGSACCGLSACLLRKFHWLLC*DMRCQP
Trigger: TGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRATGII*APSLGP
Trigger: TGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKATGII*APSLGP
Trigger: TGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCCTTCACTGGGGCCATaGGAAATTCACAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQPSLGP*EIHKVH
Trigger: ATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGG...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCA +
Preference number: 2 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDDPRLG*QEMGSA
Trigger: TGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTC...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACTTTATAAGGCTGCGTaGCCACCACTGGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGLYKAA*PPLASL
Trigger: CAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAG...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACTCTGGGCTCCTTCACTaGGGCCATGGGAAATTCACA +
Preference number: 2 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDSGLLH*GHGKFT
Trigger: TGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGA...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CAA 90 bp CGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTaGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: RQTLLAAQQNIEKPC*LHYRETTSPSTLPL
Trigger: CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp TGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 2 (lower is better)
Translates to: CPFVALASHFICIGLVLGEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
3UTR CAA 90 bp CAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTaGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: QTLLAAQQNIEKPCL*HYRETTSPSTLPLD
Trigger: GTCCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCACACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPHWLLC*DMRCQP
Trigger: TGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTG...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGAGGGAGTCACTGATTaGCTGGAAAGTGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAEGVTD*LESGGS
Trigger: GCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
3UTR-3UTR GCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGTAGAAACCAAAACCTaGTTTATAAGGCTGCGTGGC +
Preference number: 2 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKVETKT*FIRLRG
Trigger: GCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCTAC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCTGGGCAGAGGCTTTTaGAGAGAGGCCAGTTATGGG +
Preference number: 2 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTLGRGF*REASYG
Trigger: CCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
3UTR-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAGGGCTGCTGGCAGGGTaGGTATTTGGAAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKGLLAG*VFGRRR
Trigger: CCGCCTCCTTCCAAATACCCACCCTGCCAGCAGCCC...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp GCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTCCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 2 (lower is better)
Translates to: AIDSLLAQVVPQSLQCPFPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...AAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
3UTR-3UTR TCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCA +
Preference number: 2 (lower is better)
Translates to: LRESQQLKNRCPRERHLEDPRLG*QEMGSA
Trigger: TGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTC...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATTTGGAAGGAGGCGGTaGAGACCCAAGACTAGGATG +
Preference number: 2 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTFGRRR*RPKTRM
Trigger: CATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGCCTTCACTGGGGCCATaGGAAATTCACAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWPSLGP*EIHKVH
Trigger: ATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGG...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATATGTTTTCTCCTCTTaGGCTACAACTCAGCAACCA +
Preference number: 2 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTYVFSS*ATTQQP
Trigger: TGGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR TCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAATATGTTTTCTCCTCTTaGGCTACAACTCAGCAACCA +
Preference number: 2 (lower is better)
Translates to: LRESQQLKNRCPRERHLEYVFSS*ATTQQP
Trigger: TGGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATA...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 72 bp TGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTaGGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGT +
Preference number: 3 (lower is better)
Translates to: WVRHVVASPPVY*GSSRVSPQDSG
Trigger: ACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 72 bp TTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCAGGCAGACAGGTGACA +
Preference number: 3 (lower is better)
Translates to: FIRLRGHHWLLC*DMRCQPGRQVT
Trigger: TGTCACCTGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
3UTR TCA 72 bp TTGATTGGAAGCCCATCCTACAATAGTGACTGCTCCTaGAACCCACCTACCAAGCCGCCAGACCCTGCTTGC +
Preference number: 3 (lower is better)
Translates to: LIGSPSYNSDCS*NPPTKPPDPAC
Trigger: GCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCACTATTGTAGGATGGGCTTCCAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR GCA 72 bp CTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTaGTTGCTGCACAGCAGAACATTGAGAAACCATGTT +
Preference number: 3 (lower is better)
Translates to: LLLKPTYQAARP*LLHSRTLRNHV
Trigger: AACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGTGGCAGGGTGGGTATTaGGAAGGAGGCGGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWWQGGY*EGGGED
Trigger: GTCTTCACCGCCTCCTTCCAAATACCCACCCTGCCA...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp GATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 3 (lower is better)
Translates to: DGVAIDSLLAQVVPQSLQAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...CTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
3UTR TCA 72 bp TATTTGGAAGGAGGCGGTGAAGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCATGTTGTGGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: YLEGGGEDPRLG*QEMGSACCGLS
Trigger: GGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 72 bp AAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTaGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGG +
Preference number: 3 (lower is better)
Translates to: KTRMTGNGFGML*PLRLSTEEVQG
Trigger: CCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGTGGCAGGGTGGGTATTaGGAAGGAGGCGGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLWQGGY*EGGGED
Trigger: GTCTTCACCGCCTCCTTCCAAATACCCACCCTGCCA...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp GCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 3 (lower is better)
Translates to: AIDSLLAQVVPQSLQCPFMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...AAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
3UTR-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAGGAAGCAGAAAGTCTaGAAGTCTGCCCAGAGCACT +
Preference number: 3 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLRKQKV*KSAQST
Trigger: AGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
3UTR CCA 72 bp GCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATaGGAAATTCACAAAGTTCATAGACCCTCTCACACC +
Preference number: 3 (lower is better)
Translates to: ATGIIWAPSLGP*EIHKVHRPSHT
Trigger: GGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp CTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTAAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 3 (lower is better)
Translates to: LQCPFVALASHFICIGLVRCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...TACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
3UTR TCA 72 bp CAACATCCTTTATCTTCTCCCAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCT +
Preference number: 3 (lower is better)
Translates to: QHPLSSPRWRRY*LPSGSGSSTKP
Trigger: AGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTGGGAGAAGATAAAGGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434241.1
3UTR GCA 72 bp CAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGCATTCTTTTTATTGAC +
Preference number: 3 (lower is better)
Translates to: QCPFVALASHFI*IGLVLGILFID
Trigger: GTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
3UTR TCA 72 bp CGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGT +
Preference number: 3 (lower is better)
Translates to: RILATGKADQSI*KEVNPQRIVGS
Trigger: ACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
3UTR CCA 72 bp GATACATGGAGACAGGTAACAGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCATGGGAAATTCACAAA +
Preference number: 3 (lower is better)
Translates to: DTWRQVTATGII*APSLGPWEIHK
Trigger: TTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CCA 72 bp ACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTaGACTGTGTCCTTTGATACATGGAGACAGGTAACA +
Preference number: 3 (lower is better)
Translates to: TIEKPHLLPPSP*TVSFDTWRQVT
Trigger: TGTTACCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR-3UTR CAA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTGTATGTTTTCTCCTCTaGAGCTACAACTCAGCAACC +
Preference number: 3 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTVCFLL*SYNSAT
Trigger: GGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATAC...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR TCA 72 bp AGGGAGGTAGAATCAGTTCAGTACAAGAGTTTAGTCTaGGGTTTGATTGGAAGCCCATCCTACAATAGTGAC +
Preference number: 3 (lower is better)
Translates to: REVESVQYKSLV*GLIGSPSYNSD
Trigger: GTCACTATTGTAGGATGGGCTTCCAATCAAACCTCAGACTAAACTCTTGTACTGAACTGATTCTACCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGGGAGGTGGGCAGGCTaGTGGTGGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTGRWAG*WWSCCS
Trigger: GCTGCAGCAGCTCCACCACCAGCCTGCCCACCTCCC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGGCCAGGCTCTTCCCTaGAGGGTTTTCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTGQALP*RVFPSR
Trigger: GCGGCTGGGGAAAACCCTTCAGGGAAGAGCCTGGCC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTQGGPA*PIQHPP
Trigger: AGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTGDFMW*PQQPSQ
Trigger: CTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGGCCAGGCTCTTCCCTaGAGGGTTTTCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERGQALP*RVFPSR
Trigger: GCGGCTGGGGAAAACCCTTCAGGGAAGAGCCTGGCC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGGCGTGGCAGGTACTGTaGCTGAGGGACCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQAWQVL*LRDHSA
Trigger: AGCAGAGTGGTCCCTCAGGCACAGTACCTGCCACGC...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCCTGAGGCCAGACTCTaGCCTCCGAGGGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQPEARL*PPRVSQ
Trigger: CTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGG...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACCTGAGGCCAGACTCTaGCCTCCGAGGGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTPEARL*PPRVSQ
Trigger: CTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATGCTCTCCCACGCTTTaGGCAGGAGCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTCSPTL*AGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR GCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCTTCCTCCCTCGGCCTaGTGGGCTACCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFLPPSA*WATRQP
Trigger: AGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCAGACTGGCCCAGCTaGATGGAAGAGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSDWPS*MEERRV
Trigger: CACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGTGCTGTGTTCCTGCTaGGGCCATGAGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERVLCSC*GHEGPT
Trigger: TGTGGGCCCCTCATGGCCTCAGCAGGAACACAGCAC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKQGGPA*PIQHPP
Trigger: AGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTG...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGCAACCCCAAGGTATCTaGGGCACCAGGGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLQPQGI*GTREDP
Trigger: CGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTG...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGAGCCCACTGGCATGTaGGGCAAGGAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTEPTGM*GKEVNA
Trigger: AGCATTCACCTCCTTGCCTCACATGCCAGTGGGCTC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAGGCAGGGTTGTGATTaGGCCCACTGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTRQGCD*AHWHVR
Trigger: CCTCACATGCCAGTGGGCTCAATCACAACCCTGCCT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVGDFMW*PQQPSQ
Trigger: CTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCC...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAACAGGTGACAGAGGGTaGCCCTTCCTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTTGDRG*PFLTFS
Trigger: GGAGAAGGTGAGGAAGGGTCACCCTCTGTCACCTGT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGACGCACCGCCACGCGTaGCAAGCGCACTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWTHRHA*QAHSAA
Trigger: GGCGGCCGAGTGCGCTTGTCACGCGTGGCGGTGCGT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS-3UTR CCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGTGGATGAGGAGGCCATaGGCTGGGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQWMRRP*AGPWRR
Trigger: TCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCA...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTGGATGAGGAGGCCATaGGCTGGGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSWMRRP*AGPWRR
Trigger: TCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAGGCGATATGGGCACTaGCATCAGCTGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTRRYGH*HQLGQC
Trigger: GCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGGCGGGTGGCCACGTTaGCTATGCCAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTGGWPR*LCQEFE
Trigger: CTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTGGAAGAGAGGCGGGTaGCCACGTTGGCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSWKRGG*PRWLCQ
Trigger: TTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTCACAGGCAGGGTTGTaGTTGAGCCCACTGGCATGT +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSSQAGL*LSPLAC
Trigger: ACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTRWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTHWLLC*DMRCQP
Trigger: TGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTACGCACCGCCACGCGTaGCAAGCGCACTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTTHRHA*QAHSAA
Trigger: GGCGGCCGAGTGCGCTTGTCACGCGTGGCGGTGCGT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGTCCTCACTGTCCTTTaGGGAACTGGGTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSVLTVL*GTGFPS
Trigger: GCTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGAC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGTCAACAGGCTGCGGTaGACAGTCTCCAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVVNRLR*TVSSTP
Trigger: GGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGAC...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGGGGACCTGGAGCTTTaGCTTCTCCAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSGDLEL*LLQMLR
Trigger: CCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCTTCCTCCCTCGGCCTaGTGGGCTACCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLPPSA*WATRQP
Trigger: AGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTTCCTCCCTCGGCCTaGTGGGCTACCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVPPSA*WATRQP
Trigger: AGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCCATGGGCTGGGCCATaGAGAAGACCATGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQPWAGP*RRPWKK
Trigger: CTTCTTCCATGGTCTTCTCCATGGCCCAGCCCATGG...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTVDKAI*ALASAG
Trigger: CCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTAC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGTGGTGGATGTGTCGTaGGAGCTAGCGGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSVVDVS*ELAVDK
Trigger: CTTGTCTACCGCTAGCTCCCACGACACATCCACCAC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGTCAGACTGGCCCAGCTaGATGGAAGAGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVSDWPS*MEERRV
Trigger: CACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGA...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACTCTCCTTCTCAGACTaGCCCAGCTGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTLSFSD*PSWMEE
Trigger: CTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTGGCCACCGATTCGCTaGGGGAGACAGCACTTAATG +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSWPPIR*GRQHLM
Trigger: CATTAAGTGCTGTCTCCCCCAGCGAATCGGTGGCCA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACCTCCCTCGGCCTGCTaGGCTACCCGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAPPSAC*ATRQPQ
Trigger: CTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGGCCAGGCTCTTCCCTaGAGGGTTTTCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLGQALP*RVFPSR
Trigger: GCGGCTGGGGAAAACCCTTCAGGGAAGAGCCTGGCC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGAGATGGGATCTTCCCTaGGATGGCAGAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVRWDLP*DGRGQA
Trigger: AGCCTGGCCTCTGCCATCTCAGGGAAGATCCCATCT...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTAMPRV*GKGGPG
Trigger: TCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCAATATCCCTATCAGATaGGTCCAGCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSNIPIR*VQLPGL
Trigger: GAGGCCAGGGAGCTGGACTCATCTGATAGGGATATT...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSSVSA*SGWRSV
Trigger: TACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSSSVSA*SGWRSV
Trigger: TACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGGTCCAATGGTCTGCTTaGCAATGTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQVQWSA*QCWGSL
Trigger: CAGTGACCCCCAACATTGTCAAGCAGACCATTGGAC...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTGDFMW*PQQPSQ
Trigger: CTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCC...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSADQSI*KEVNPQ
Trigger: CTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGAGGGAGTCACTGATTaGCTGGAAAGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSEGVTD*LESGGS
Trigger: GCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGCGTGGCAGGTACTGTaGCTGAGGGACCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKAWQVL*LRDHSA
Trigger: AGCAGAGTGGTCCCTCAGGCACAGTACCTGCCACGC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCAAGCTGGCAGCCTTaGCTCGGCATCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSSWQP*LGIFSK
Trigger: CTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVTFGGC*SPTLCA
Trigger: TGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGT...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCTCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CPFVALASHFICIGLVLGSTFGG*CSPTLC
Trigger: GCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGA...GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGCAAGCCGCCAGACCCTaGTTGCTGCACAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERQAARP*LLHSRT
Trigger: TGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTG...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACGAGGGTTTCTCAGGTaGCGTGGCAGGTACTGTGCC +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKRGFLR*RGRYCA
Trigger: GGCACAGTACCTGCCACGCCACCTGAGAAACCCTCG...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGTTTTTGCCTATAGCTaGAGCGGCGGTATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTVFAYS*SGGIAG
Trigger: CCCTGCTATACCGCCGCTCCAGCTATAGGCAAAAAC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGAGGAGGCCATGGGCTaGGCCATGGAGAAGACCATG +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFEEAMG*AMEKTM
Trigger: CATGGTCTTCTCCATGGCCCAGCCCATGGCCTCCTC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGAGGCTGGATCTTGGGTaGCGATACTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLRLDLG*RYWLQA
Trigger: GGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCT...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACTTTTGGGCACCTTATaGTCAACAGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTLLGTL*STGCGA
Trigger: TGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTGTGIS*DSANAF
Trigger: AAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTTCACAATCCACTTTTaGCGGCTGCTGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSFTIHF*RLLLSH
Trigger: GTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGATGCTGATATCCAGTaGAGAGCTGGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTDADIQ*RAGVEA
Trigger: AGCCTCCACTCCAGCTCTCCACTGGATATCAGCATC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGGAGGTGGGCAGGCTaGTGGTGGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPGRWAG*WWSCCS
Trigger: GCTGCAGCAGCTCCACCACCAGCCTGCCCACCTCCC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGAGTCTTCTTGGATTTaGGCGTGGTCCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTESSWI*AWSRLQ
Trigger: CTGAAGACGGGACCACGCCCAAATCCAAGAAGACTC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACTTTATAAGGCTGCGTaGCCACCACTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTLYKAA*PPLASL
Trigger: CAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGGGCTGCTGGCAGGGTaGGTATTTGGAAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTGLLAG*VFGRRR
Trigger: CCGCCTCCTTCCAAATACCCACCCTGCCAGCAGCCC...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTCCTCCCTCGGCCTGCTaGGCTACCCGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPPPSAC*ATRQPQ
Trigger: CTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGG...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGTCTCATGGCCTTGCTaGGGTAAGGTGCCACACACC +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKVSWPC*GKVPHT
Trigger: GGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGAC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAQGGPA*PIQHPP
Trigger: AGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCAACCCCAAGGTATCTaGGGCACCAGGGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATQPQGI*GTREDP
Trigger: CGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATGTGAGGCAAGGAGGTaGATGCTGATACGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTCEARR*MLIRLV
Trigger: TACCAAGCGTATCAGCATTCACCTCCTTGCCTCACA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGAGGCAGGGTTGTGATTaGGCCCACTGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRRQGCD*AHWHVR
Trigger: CCTCACATGCCAGTGGGCTCAATCACAACCCTGCCT...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGAAAGAGACTGTAGATaGGGGCTGGTCGGACAACTT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTERDCR*GLVGQL
Trigger: AAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCAGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FHKAFSAHLWPWQAISSAGDFMW*PQQPSQ
Trigger: CTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCC...TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGGCTTGGGGAAATGTTaGCTTCCAGGACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRGLGKC*LPGPRA
Trigger: AGCCCTGGGTCCTGGAAGTCAACATTTCCCCAAGCC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCATCTTCTGTGCAGTaGCATGCTCTGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSSSVQ*HALEPF
Trigger: GAATGGCTCCAGAGCATGTCACTGCACAGAAGATGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCCGGTAGTAGCAGCTaGATCCTTGAAGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSGSSS*ILEVCQ
Trigger: CTGACAGACTTCAAGGATGCAGCTGCTACTACCGGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp CCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCTTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PSGSGSSTKPSVPICGPGLPKRL*IRDRFR
Trigger: GCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAA...GCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGCCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGTTTCTCAGGTGGCGTaGCAGGTACTGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKVSQVA*QVLCLR
Trigger: CCTCAGGCACAGTACCTGCCACGCCACCTGAGAAAC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGATATGCTGGCTGGGGTaGGACGCCCAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKICWLG*DAQEAW
Trigger: CCAGGCCTCTTGGGCGTCCCACCCCAGCCAGCATAT...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCTGGATGAGGAGGCCATaGGCTGGGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFWMRRP*AGPWRR
Trigger: TCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCA...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGTGCCAGGAGACAGGCTaGATCTTGGGTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERCQETG*ILGGDT
Trigger: AGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCA...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLVDKAI*ALASAG
Trigger: CCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTAC...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGGCGGGTGGCCACGTTaGCTATGCCAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKGGWPR*LCQEFE
Trigger: CTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCCTTCCTCCCAATCTaGAATGAGCCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSFLPI*NEPGKW
Trigger: CCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGGAGGGGCCTTCGCTTaGGGAGCTGACTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEGGAFA*GADSTC
Trigger: ACAAGTGGAGTCAGCTCCCCAAGCGAAGGCCCCTCC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCGAATACTTGCAACTaGCAAAGCGGACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTANTCN*QSGPVH
Trigger: ATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGTGCTGTGTTCCTGCTaGGGCCATGAGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWVLCSC*GHEGPT
Trigger: TGTGGGCCCCTCATGGCCTCAGCAGGAACACAGCAC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGCTGTGGCCTGCAATaGCAGCCGTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNACCGLQ*QPWSQS
Trigger: GCTCTGGGACCACGGCTGTCATTGCAGGCCACAGCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATGCTGTGGCCTGCAATaGCAGCCGTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPCCGLQ*QPWSQS
Trigger: GCTCTGGGACCACGGCTGTCATTGCAGGCCACAGCA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGTATGGTTCTGTGGATaGGGAGGCCATGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATVWFCG*GGHGLG
Trigger: GCCCAGCCCATGGCCTCCTCATCCACAGAACCATAC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCCAGTACCCCCTGAATaGTGCCAGGAGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLPVPPE*CQETGW
Trigger: CCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCACAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPQGGPA*PIQHPP
Trigger: AGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTG...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACAACCCCAAGGTATCTaGGGCACCAGGGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPQPQGI*GTREDP
Trigger: CGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCCAAGGAGGTGAATGCTaGTACGCTTGGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSQGGEC*YAWYRR
Trigger: TCTTCTGTACCAAGCGTATCAGCATTCACCTCCTTG...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGAGCCCACTGGCATGTaGGGCAAGGAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEEPTGM*GKEVNA
Trigger: AGCATTCACCTCCTTGCCTCACATGCCAGTGGGCTC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGCAGGGTTGTGATTaGGCCCACTGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDRQGCD*AHWHVR
Trigger: CCTCACATGCCAGTGGGCTCAATCACAACCCTGCCT...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTCACAGGCAGGGTTGTaGTTGAGCCCACTGGCATGT +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRSQAGL*LSPLAC
Trigger: ACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGA...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGAATATCCCTATCAGATaGGTCCAGCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVNIPIR*VQLPGL
Trigger: GAGGCCAGGGAGCTGGACTCATCTGATAGGGATATT...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGCCAATGCCTCGAGCTaGTGCTGGTGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRANASS*CWWLHN
Trigger: ATTGTGAAGCCACCAGCATCAGCTCGAGGCATTGGC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: CPFVALASHFICIGLVLGADQSI*KEVNPQ
Trigger: CTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGC...GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR TCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGGTCGCACATACATCTTaGGCAGGCTGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLVAHTS*AGWSHR
Trigger: CCTATGTGACCAGCCTGCTCAAGATGTATGTGCGAC...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTQLASL*FAEGIE
Trigger: CTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERDPRLG*QEMGSA
Trigger: TGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGCTTGCTGAGGTAAGGTaGCACACACCTCCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVLAEVR*HTPPVV
Trigger: TACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAG...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGGAACTGCTGTGGCCTaGAATGACAGCCGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLGTAVA*NDSRGP
Trigger: GGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGCATCAGCTGGGACAGTaGCAATGCTTTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERHQLGQ*QCFWAP
Trigger: AGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATG...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCAAGCTGGCAGCCTTaGCTCGGCATCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLSSWQP*LGIFSK
Trigger: CTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGA...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGTCAAGCTGGCAGCCTTaGCTCGGCATCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERSSWQP*LGIFSK
Trigger: CTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGA...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTWPRWL*QEFEEK
Trigger: CTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATGTTGGGGGTCACTGTaGTCATCTTCCATCGGAGCA +
Preference number: 4 (lower is better)
Translates to: AHLWPWQAISSALAWYSACWGSL*SSSIGA
Trigger: TGCTCCGATGGAAGATGAGCACAGTGACCCCCAACA...TGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR GCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGGACCGTCCAATGGTCTaGTTGACAATGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLDRPMV*LTMLGV
Trigger: GACCCCCAACATTGTCAAGCAGACCATTGGACGGTC...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGTTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGTGCTCTCCCACGCTTTaGGCAGGAGCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSTKPSVPICGPGKPFHLCSPTL*AGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCA...CAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGTFGGC*SPTLCA
Trigger: TGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGT...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTAACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LQCPFVALASHFICIGLVTFGGC*SPTLCA
Trigger: TGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGT...TACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACTCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDSTFGG*CSPTLC
Trigger: GCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGA...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTTCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTSTFGG*CSPTLC
Trigger: GCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGA...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp GGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GVAIDSLLAQVVPQSLQCPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...GCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGGGCAGGACAAAACCTaGCAGATTCAGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERGQDKT*QIQKVT
Trigger: CGTGACCTTCTGAATCTGGCAGGTTTTGTCCTGCCC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGACATCCAGCACAGATaGATAGAAGTCCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTDIQHR*IEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACCAAGCCGCCAGACCCTaGTTGCTGCACAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDQAARP*LLHSRT
Trigger: TGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTG...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGAGGGGCCCACATCATaGCCACACGGTCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPEGPTS*PHGLMA
Trigger: GGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAATATGCTGGCTGGGGTaGGACGCCCAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPICWLG*DAQEAW
Trigger: CCAGGCCTCTTGGGCGTCCCACCCCAGCCAGCATAT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAATATGCTGGCTGGGGTaGGACGCCCAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAICWLG*DAQEAW
Trigger: CCAGGCCTCTTGGGCGTCCCACCCCAGCCAGCATAT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTCTTGGGTGGCGATACTaGCTTCAGGCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTLGWRY*LQALCG
Trigger: ACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAG...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTAGGCTGGATCTTGGGTaGCGATACTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTRLDLG*RYWLQA
Trigger: GGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCT...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGTGGTGGATGTGTCGTaGGAGCTAGCGGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRVVDVS*ELAVDK
Trigger: CTTGTCTACCGCTAGCTCCCACGACACATCCACCAC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATCCTTAGTTGGATCCTaGGAATCAGAGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTSLVGS*ESELSS
Trigger: GGATGACAGCTCTGATTCCCAGGATCCAACTAAGGA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFLDCSS*QPCLGI
Trigger: GATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCTTGAGGACATTCCACTaGAAGCTGGGGTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSLRTFH*KLGFRK
Trigger: TTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCAA...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGACTGGCCCAGCTGGATaGAAGAGAGGCGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWTGPAG*KRGGWP
Trigger: TGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATTGCTGATTTTGAAGTaGGACCGTCCAATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTLLILK*DRPMVC
Trigger: GCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAAGGAGCTTGGCGTCCTaGGGCAGGATAAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGRSLAS*GRIKDW
Trigger: CCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCT...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATTAGGAGCTTGGCGTCCTaGGGCAGGATAAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PFVALASHFICIGLVLGIRSLAS*GRIKDW
Trigger: CCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCT...AATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGGAGGGGCCTTCGCTTaGGGAGCTGACTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLGGAFA*GADSTC
Trigger: ACAAGTGGAGTCAGCTCCCCAAGCGAAGGCCCCTCC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGGAGGGGCCTTCGCTTaGGGAGCTGACTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATGGAFA*GADSTC
Trigger: ACAAGTGGAGTCAGCTCCCCAAGCGAAGGCCCCTCC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGGAGGGGCCTTCGCTTaGGGAGCTGACTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEGGAFA*GADSTC
Trigger: ACAAGTGGAGTCAGCTCCCCAAGCGAAGGCCCCTCC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGCTGGAGTGGAGGCTTaGGGAAATGTTGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERAGVEA*GNVDFQ
Trigger: CTGGAAGTCAACATTTCCCCAAGCCTCCACTCCAGC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGGGAGGTGGGCAGGCTaGTGGTGGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRGRWAG*WWSCCS
Trigger: GCTGCAGCAGCTCCACCACCAGCCTGCCCACCTCCC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAATCCGAACATCATCTaGTGTCAGGACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTNPNII*CQDIQH
Trigger: GTGCTGGATGTCCTGACACCAGATGATGTTCGGATT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFATGII*APSLGP
Trigger: TGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCATGCTGTGGCCTGCAATaGCAGCCGTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPCCGLQ*QPWSQS
Trigger: GCTCTGGGACCACGGCTGTCATTGCAGGCCACAGCA...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGTATGGTTCTGTGGATaGGGAGGCCATGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPVWFCG*GGHGLG
Trigger: GCCCAGCCCATGGCCTCCTCATCCACAGAACCATAC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTCCAGTACCCCCTGAATaGTGCCAGGAGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTPVPPE*CQETGW
Trigger: CCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGG...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVSSTP*MMPGDR
Trigger: CCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCCTTCTCCAAATGCTaGGGAGTCAATTACAGATTC +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTAFSKC*GVNYRF
Trigger: GAATCTGTAATTGACTCCTCAGCATTTGGAGAAGGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGCCTTCTCCAAATGCTaGGGAGTCAATTACAGATTC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSAFSKC*GVNYRF
Trigger: GAATCTGTAATTGACTCCTCAGCATTTGGAGAAGGC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRSSVSA*SGWRSV
Trigger: TACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGA...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGAAATGGTTTAGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQKWFSF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCTAAACCATTT...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KPSVPICGPGKPFHLHWPRWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...AGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAACAGGTGACAGAGGGTaGCCCTTCCTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEETGDRG*PFLTFS
Trigger: GGAGAAGGTGAGGAAGGGTCACCCTCTGTCACCTGT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTCCGCCTGTCTACTaGGGAAGTTCAAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLSPPVY*GSSRVS
Trigger: AGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGA...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTTTGGAAGGAGGCGGTaGAGACCCAAGACTAGGATG +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRFGRRR*RPKTRM
Trigger: CATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAA...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACCTGAGGCCAGACTCTaGCCTCCGAGGGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAPEARL*PPRVSQ
Trigger: CTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGAACTGCTGTGGCCTaGAATGACAGCCGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPGTAVA*NDSRGP
Trigger: GGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGTTTTCCCCAGCCGCTaGCAAGCAGAGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGVFPSR*QAEVWF
Trigger: GAACCATACCTCTGCTTGGCAGCGGCTGGGGAAAAC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGTCAACAGGCTGCGGTaGACAGTCTCCAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPVNRLR*TVSSTP
Trigger: GGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGAC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGATTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGLPKRL*IRDRFR
Trigger: GCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAA...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATTTTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PFVALASHFICIGLVLGILPKRL*IRDRFR
Trigger: GCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAA...AATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGCTCTCCCACGCTTTaGGCAGGAGCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNACSPTL*AGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEESTFGG*CSPTLC
Trigger: GCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp GGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: GVAIDSLLAQVVPQSLQCASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...GCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp CAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: QCPFVALASHFICIGLVLASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...GAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACCCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQCPFVALASHFICIGLVPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...TACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR GCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGGAAATGATATCCTCTaGATTGGGCAGGACAAAACC +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSGNDIL*IGQDKT
Trigger: GGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCGAGGGGCCCACATCATaGCCACACGGTCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSEGPTS*PHGLMA
Trigger: GGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTC...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACGAGGGTTTCTCAGGTaGCGTGGCAGGTACTGTGCC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPRGFLR*RGRYCA
Trigger: GGCACAGTACCTGCCACGCCACCTGAGAAACCCTCG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGCAAAAGAAATATGCTaGCTGGGGTGGGACGCCCAA +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRAKEIC*LGWDAQ
Trigger: TTGGGCGTCCCACCCCAGCCAGCATATTTCTTTTGC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGAGGAGGCCATGGGCTaGGCCATGGAGAAGACCATG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAEEAMG*AMEKTM
Trigger: CATGGTCTTCTCCATGGCCCAGCCCATGGCCTCCTC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGGGATCTTCCCTGAGATaGCAGAGGCCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKGSSLR*QRPGSS
Trigger: GGAAGAGCCTGGCCTCTGCCATCTCAGGGAAGATCC...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGGATCTTCCCTGAGATaGCAGAGGCCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATGSSLR*QRPGSS
Trigger: GGAAGAGCCTGGCCTCTGCCATCTCAGGGAAGATCC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCTTGGGTGGCGATACTaGCTTCAGGCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLGWRY*LQALCG
Trigger: ACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCTTGGGTGGCGATACTaGCTTCAGGCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATLGWRY*LQALCG
Trigger: ACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTTGCCAGGAGACAGGCTaGATCTTGGGTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTCQETG*ILGGDT
Trigger: AGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCA...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGCGATATGGGCACTaGCATCAGCTGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATRRYGH*HQLGQC
Trigger: GCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAGGCGATATGGGCACTaGCATCAGCTGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLRRYGH*HQLGQC
Trigger: GCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGGCGGGTGGCCACGTTaGCTATGCCAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATGGWPR*LCQEFE
Trigger: CTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTGGAAGAGAGGCGGGTaGCCACGTTGGCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLWKRGG*PRWLCQ
Trigger: TTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTACTGGCCCAGCTGGATaGAAGAGAGGCGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTTGPAG*KRGGWP
Trigger: TGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QCPFVALASHFICIGLVLAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...GAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGATGCTGATATCCAGTaGAGAGCTGGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKDADIQ*RAGVEA
Trigger: AGCCTCCACTCCAGCTCTCCACTGGATATCAGCATC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGGCTGGGCTCTTTGCTaGTGTCCTCACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTGWALC*CPHCPL
Trigger: CAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCC...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGCTTTATAAGGCTGCGTaGCCACCACTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRLYKAA*PPLASL
Trigger: CAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAG...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCTTTATAAGGCTGCGTaGCCACCACTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFLYKAA*PPLASL
Trigger: CAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCTCTGGGCTCCTTCACTaGGGCCATGGGAAATTCACA +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFSGLLH*GHGKFT
Trigger: TGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGA...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAATCTGGGCTCCTTCACTaGGGCCATGGGAAATTCACA +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKSGLLH*GHGKFT
Trigger: TGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGA...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCTTCCACCCTCCCCCTaGACTGTGTCCTTTGATACA +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFLPPSP*TVSFDT
Trigger: TGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTGTATGGTTCTGTGGATaGGGAGGCCATGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPVWFCG*GGHGLG
Trigger: GCCCAGCCCATGGCCTCCTCATCCACAGAACCATAC...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGATGGGATCTTCCCTaGGATGGCAGAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPRWDLP*DGRGQA
Trigger: AGCCTGGCCTCTGCCATCTCAGGGAAGATCCCATCT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAATGTGAGGCAAGGAGGTaGATGCTGATACGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKCEARR*MLIRLV
Trigger: TACCAAGCGTATCAGCATTCACCTCCTTGCCTCACA...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWESSVSA*SGWRSV
Trigger: TACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGAAAGAGACTGTAGATaGGGGCTGGTCGGACAACTT +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRERDCR*GLVGQL
Trigger: AAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGAAAGAGACTGTAGATaGGGGCTGGTCGGACAACTT +
Preference number: 4 (lower is better)
Translates to: SLQCPFVALASHFICIGLERDCR*GLVGQL
Trigger: AAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTC...CAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR TCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTGTCCAATGGTCTGCTTaGCAATGTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTVQWSA*QCWGSL
Trigger: CAGTGACCCCCAACATTGTCAAGCAGACCATTGGAC...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR TCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAACTGGGGGAAGAAACTaGACTCCTTCTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKTGGRN*TPSCQS
Trigger: GCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGT...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCAAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FHKAFSAHLWPWQAISSARWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATRWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGCTTGGGGAAATGTTaGCTTCCAGGACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPGLGKC*LPGPRA
Trigger: AGCCCTGGGTCCTGGAAGTCAACATTTCCCCAAGCC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACTGCTGGGGCTGGAAATaGTATCCTCTGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDCWGWK*YPLHWA
Trigger: TGCCCAATGCAGAGGATATCATTTCCAGCCCCAGCA...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTTGCTGGGGCTGGAAATaGTATCCTCTGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTCWGWK*YPLHWA
Trigger: TGCCCAATGCAGAGGATATCATTTCCAGCCCCAGCA...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAAAATTCGTTCAAACTaGCCACGGCGAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTKIRSN*PRRENS
Trigger: TGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGGGGAAAGGCCAGCTTaGGTCTTCTTGGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATGERPA*VFLDLG
Trigger: GCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATCTGCCCAGAGCACTTaGTCACAGGTAACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEESAQST*SQVTSG
Trigger: CCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAACAGGTGACAGAGGGTaGCCCTTCCTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPTGDRG*PFLTFS
Trigger: GGAGAAGGTGAGGAAGGGTCACCCTCTGTCACCTGT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLHWLLC*DMRCQP
Trigger: TGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGACCCAAGACTAGGATaGCAGGAAATGGGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGDPRLG*QEMGSA
Trigger: TGCCGAACCCATTTCCTGTCATCCTAGTCTTGGGTC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATACAAGAGTTTAGTCTaGGGTTTGATTGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTYKSLV*GLIGSP
Trigger: TGGGCTTCCAATCAAACCTCAGACTAAACTCTTGTA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTCCTCACTGTCCTTTaGGGAACTGGGTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVLTVL*GTGFPS
Trigger: GCTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGCCAATGCCTCGAGCTaGTGCTGGCTTCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAANASS*CWLLML
Trigger: GAGCATCAGAAGCCAGCATCAGCTCGAGGCATTGGC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442769.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTTTTCCCCAGCCGCTaGCAAGCAGAGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVFPSR*QAEVWF
Trigger: GAACCATACCTCTGCTTGGCAGCGGCTGGGGAAAAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTTTTCCCCAGCCGCTaGCAAGCAGAGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVFPSR*QAEVWF
Trigger: GAACCATACCTCTGCTTGGCAGCGGCTGGGGAAAAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEERPCVV*NKGTGV
Trigger: CACGCCAGTGCCTTTATTGCAGACCACACAGGGCCT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTCAACAGGCTGCGGTaGACAGTCTCCAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVNRLR*TVSSTP
Trigger: GGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCGACCGTCCAATGGTCTaGTTGACAATGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: QSLQCPFVALASHFICIGDRPMV*LTMLGV
Trigger: GACCCCCAACATTGTCAAGCAGACCATTGGACGGTC...GCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATLPKRL*IRDRFR
Trigger: GCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR GCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGTGCTCTCCCACGCTTTaGGCAGGAGCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLCSPTL*AGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCA...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTTCATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAATGCTCTCCCACGCTTTaGGCAGGAGCTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSWKANTCNWQSGPVHLKCSPTL*AGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCA...TTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTGTTTCTCAGGTGGCGTaGCAGGTACTGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTVSQVA*QVLCLR
Trigger: CCTCAGGCACAGTACCTGCCACGCCACCTGAGAAAC...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGAAATATGCTGGCTaGGGTGGGACGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATKKYAG*GGTPKR
Trigger: CCTCTTGGGCGTCCCACCCCAGCCAGCATATTTCTT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAAGAAATATGCTGGCTaGGGTGGGACGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLKKYAG*GGTPKR
Trigger: CCTCTTGGGCGTCCCACCCCAGCCAGCATATTTCTT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACGTTTTTGCCTATAGCTaGAGCGGCGGTATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDVFAYS*SGGIAG
Trigger: CCCTGCTATACCGCCGCTCCAGCTATAGGCAAAAAC...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGAGGAGGCCATGGGCTaGGCCATGGAGAAGACCATG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTEEAMG*AMEKTM
Trigger: CATGGTCTTCTCCATGGCCCAGCCCATGGCCTCCTC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACACTGGCGTGCTATTTaGCCACATGAAGGAATTATT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTHWRAI*PHEGII
Trigger: AATAATTCCTTCATGTGGCCAAATAGCACGCCAGTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTGGGTGGCGATACTaGCTTCAGGCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLGWRY*LQALCG
Trigger: ACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTGCCAGGAGACAGGCTaGATCTTGGGTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATCQETG*ILGGDT
Trigger: AGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEGTGIS*DSANAF
Trigger: AAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATVDKAI*ALASAG
Trigger: CCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTAC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAAGAGGCAACACTGGTaGTGGATGTGTCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLKRQHW*WMCRGS
Trigger: GCTCCCACGACACATCCACCACCAGTGTTGCCTCTT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAACTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEELDCSS*QPCLGI
Trigger: GATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAG...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGGCGGGTGGCCACGTTaGCTATGCCAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWGGWPR*LCQEFE
Trigger: CTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCAGACTGGCCCAGCTaGATGGAAGAGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPSDWPS*MEERRV
Trigger: CACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGA...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCTCTCCTTCTCAGACTaGCCCAGCTGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATLSFSD*PSWMEE
Trigger: CTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTTCCTTCCTCCCAATCTaGAATGAGCCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PSVPICGPGKPFHLHWPGSFLPI*NEPGKW
Trigger: CCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGA...ACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAGGAGCTTGGCGTCCTaGGGCAGGATAAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWRSLAS*GRIKDW
Trigger: CCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAGGTAGGAGCTTGGCGTCCTaGGGCAGGATAAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: WKANTCNWQSGPVHLKRGRSLAS*GRIKDW
Trigger: CCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCT...ACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGGAGCTTGGCGTCCTaGGGCAGGATAAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPRSLAS*GRIKDW
Trigger: CCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CCA 90 bp CCAGATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTTTCACAATCCACTTTTaGCGGCTGCTGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PDGVAIDSLLAQVVPQSLFTIHF*RLLLSH
Trigger: GTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAA...AAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp AAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: KAFSAHLWPWQAISSALAAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...GGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp GGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCTTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: GVAIDSLLAQVVPQSLQCFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...GCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTGGGAGGTGGGCAGGCTaGTGGTGGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVGRWAG*WWSCCS
Trigger: GCTGCAGCAGCTCCACCACCAGCCTGCCCACCTCCC...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGAATCCGAACATCATCTaGTGTCAGGACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLNPNII*CQDIQH
Trigger: GTGCTGGATGTCCTGACACCAGATGATGTTCGGATT...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAATCTTGGATTTGGGCGTaGTCCCGTCTTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKSWIWA*SRLQRV
Trigger: TACTCTCTGAAGACGGGACCACGCCCAAATCCAAGA...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGGCTGGGCTCTTTGCTaGTGTCCTCACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEGWALC*CPHCPL
Trigger: CAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCTGGGCAGAGGCTTTTaGAGAGAGGCCAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATLGRGF*REASYG
Trigger: CCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGGGTTCGGCATGTTGTaGCCTCTCCGCCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWGFGML*PLRLST
Trigger: AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGTGTCCTTTGATACATaGAGACAGGTAACAGCTACT +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTVSFDT*RQVTAT
Trigger: AGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCTGCCAAGGCTCTTCATaGAAGGCGAATACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QCPFVALASHFICIGLVLCQGSS*KANTGF
Trigger: GAAGCCAGTATTCGCCTTCCATGAAGAGCCTTGGCA...GAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434241.1
3UTR CAA 72 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTaGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGM*WPLRLSTEEVQ
Trigger: TTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CAA 72 bp CTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTaGCTGCACAGCAGAACATTGAGAAACCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLKPTYQAARPC*LHSRTLRNHVC
Trigger: ACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTCTCATGGCCTTGCTaGGGTAAGGTGCCACACACC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVSWPC*GKVPHT
Trigger: GGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR TCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAGATGGGATCTTCCCTaGGATGGCAGAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSRWDLP*DGRGQA
Trigger: AGCCTGGCCTCTGCCATCTCAGGGAAGATCCCATCT...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPVSSTP*MMPGDR
Trigger: CCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGAC...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVSSTP*MMPGDR
Trigger: CCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGAGCCCACTGGCATGTaGGGCAAGGAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTEPTGM*GKEVNA
Trigger: AGCATTCACCTCCTTGCCTCACATGCCAGTGGGCTC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATCACAGGCAGGGTTGTaGTTGAGCCCACTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNASQAGL*LSPLAC
Trigger: ACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTGDFMW*PQQPSQ
Trigger: CTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCC...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGAAATGGTTTAGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVKWFSF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCTAAACCATTT...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACACTGGGGGAAGAAACTaGACTCCTTCTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDTGGRN*TPSCQS
Trigger: GCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGT...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTACTGGGGGAAGAAACTaGACTCCTTCTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTTGGRN*TPSCQS
Trigger: GCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGT...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTAACTGGGGGAAGAAACTaGACTCCTTCTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LQCPFVALASHFICIGLVTGGRN*TPSCQS
Trigger: GCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGT...TACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTCGCACATACATCTTaGGCAGGCTGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVAHTS*AGWSHR
Trigger: CCTATGTGACCAGCCTGCTCAAGATGTATGTGCGAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTCGCACATACATCTTaGGCAGGCTGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVAHTS*AGWSHR
Trigger: CCTATGTGACCAGCCTGCTCAAGATGTATGTGCGAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGGCTTGGGGAAATGTTaGCTTCCAGGACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTGLGKC*LPGPRA
Trigger: AGCCCTGGGTCCTGGAAGTCAACATTTCCCCAAGCC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTGCTGGGGCTGGAAATaGTATCCTCTGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATCWGWK*YPLHWA
Trigger: TGCCCAATGCAGAGGATATCATTTCCAGCCCCAGCA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTGCTGGGGCTGGAAATaGTATCCTCTGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLCWGWK*YPLHWA
Trigger: TGCCCAATGCAGAGGATATCATTTCCAGCCCCAGCA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGTCCTCACTGTCCTTTaGGGAACTGGGTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWVLTVL*GTGFLG
Trigger: CCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGAC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATCTGCCCAGAGCACTTaGTCACAGGTAACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNASAQST*SQVTSG
Trigger: CCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATCTGCCCAGAGCACTTaGTCACAGGTAACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPSAQST*SQVTSG
Trigger: CCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGAGGGAGTCACTGATTaGCTGGAAAGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEEGVTD*LESGGS
Trigger: GCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATCCGGTAGTAGCAGCTaGATCCTTGAAGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWESGSSS*ILEVCQ
Trigger: CTGACAGACTTCAAGGATGCAGCTGCTACTACCGGA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAGGAACTGCTGTGGCCTaGAATGACAGCCGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQGTAVA*NDSRGP
Trigger: GGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCC...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARPCVV*NKGTGV
Trigger: CACGCCAGTGCCTTTATTGCAGACCACACAGGGCCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAGTCAACAGGCTGCGGTaGACAGTCTCCAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQVNRLR*TVSSTP
Trigger: GGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGAC...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAACTGGGACAGTGCCAATaGTTTTGGGCACCTTATGGT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWELGQCQ*FWAPYG
Trigger: ACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAG...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGGGACCTGGAGCTTTaGCTTCTCCAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPGDLEL*LLQMLR
Trigger: CCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTGTTGGGGGTCACTGTaGTCATCTTCCATCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATCWGSL*SSSIGA
Trigger: TGCTCCGATGGAAGATGAGCACAGTGACCCCCAACA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTGTTGGGGGTCACTGTaGTCATCTTCCATCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLCWGSL*SSSIGA
Trigger: TGCTCCGATGGAAGATGAGCACAGTGACCCCCAACA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp TCATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: SWKANTCNWQSGPVHLKRTFGGC*SPTLCA
Trigger: TGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGT...TCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTTFGGC*SPTLCA
Trigger: TGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR GCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCATCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPSTFGG*CSPTLC
Trigger: GCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGA...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGGGCAGGACAAAACCTaGCAGATTCAGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLGQDKT*QIQKVT
Trigger: CGTGACCTTCTGAATCTGGCAGGTTTTGTCCTGCCC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCTTCTGTGCAGTGACATaGTCTGGAGCCATTCGACAT +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFFCAVT*SGAIRH
Trigger: ATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAA...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGTTTCTTCATCTTCTGTaGAGTGACATGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERFLHLL*SDMLWS
Trigger: GCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAA...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGACATCCAGCACAGATaGATAGAAGTCCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFDIQHR*IEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAAAGGCTGGGCTCTTTaGTGGTGTCCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEKGWAL*WCPHCP
Trigger: AGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAAGGCTGGGCTCTTTaGTGGTGTCCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATKGWAL*WCPHCP
Trigger: AGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGTAGAAACCAAAACCTaGTTTATAAGGCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVVETKT*FIRLRG
Trigger: GCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCTAC...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTGAGGGGCCCACATCATaGCCACACGGTCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICEGPTS*PHGLMA
Trigger: GGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTC...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTAAGAAATATGCTGGCTaGGGTGGGACGCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTKKYAG*GGTPKR
Trigger: CCTCTTGGGCGTCCCACCCCAGCCAGCATATTTCTT...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTTTTTGCCTATAGCTaGAGCGGCGGTATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVFAYS*SGGIAG
Trigger: CCCTGCTATACCGCCGCTCCAGCTATAGGCAAAAAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACCATGGGCTGGGCCATaGAGAAGACCATGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPPWAGP*RRPWKK
Trigger: CTTCTTCCATGGTCTTCTCCATGGCCCAGCCCATGG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAGAGGTATGGTTCTGTaGATGAGGAGGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLRGMVL*MRRPWA
Trigger: AGCCCATGGCCTCCTCATCCACAGAACCATACCTCT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGAGGTATGGTTCTGTaGATGAGGAGGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATRGMVL*MRRPWA
Trigger: AGCCCATGGCCTCCTCATCCACAGAACCATACCTCT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGGCTGGATCTTGGGTaGCGATACTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRLDLG*RYWLQA
Trigger: GGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGGCGATATGGGCACTaGCATCAGCTGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRRYGH*HQLGQC
Trigger: GCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGGAAGAGGCAACACTaGTGGTGGATGTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARKRQH*WWMCRG
Trigger: CCCACGACACATCCACCACCAGTGTTGCCTCTTCCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGGAAGAGGCAACACTaGTGGTGGATGTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPRKRQH*WWMCRG
Trigger: CCCACGACACATCCACCACCAGTGTTGCCTCTTCCT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFVALPS*LSYSGY
Trigger: ATAACCGGAATAACTTAGCCATGAGGGCAGAGCCAC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCCCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFPNLLS*ILGIRA
Trigger: AGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGG...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLDCSS*QPCLGI
Trigger: GATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAACTGGCCCAGCTGGATaGAAGAGAGGCGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKTGPAG*KRGGWP
Trigger: TGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCTCCTTCTCAGACTaGCCCAGCTGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLSFSD*PSWMEE
Trigger: CTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGGCCACCGATTCGCTaGGGGAGACAGCACTTAATG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAWPPIR*GRQHLM
Trigger: CATTAAGTGCTGTCTCCCCCAGCGAATCGGTGGCCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACAACTTTCTCATGATTaGAAAGGGGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTQLSHD*KGVWSE
Trigger: TTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATTTCCTTCCTCCCAATCTaGAATGAGCCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PFVALASHFICIGLVLGISFLPI*NEPGKW
Trigger: CCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGA...AATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGCGAATACTTGCAACTaGCAAAGCGGACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGANTCN*QSGPVH
Trigger: ATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTATCCAGTGGAGAGCTaGAGTGGAGGCTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLYPVES*SGGLGK
Trigger: TTTCCCCAAGCCTCCACTCCAGCTCTCCACTGGATA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTGCAGTGACATGCTCTaGAGCCATTCGACATTTGTC +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRCSDML*SHSTFV
Trigger: GACAAATGTCGAATGGCTCCAGAGCATGTCACTGCA...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCTGCAGTGACATGCTCTaGAGCCATTCGACATTTGTC +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFCSDML*SHSTFV
Trigger: GACAAATGTCGAATGGCTCCAGAGCATGTCACTGCA...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: AWPPLASLLRYEVPARQTLSLLP*YFCSHW
Trigger: CCAATGGGAACAGAAATACCATGGCAACAAGCTTAA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGGCTGCTGGCAGGGTaGGTATTTGGAAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGLLAG*VFGRRR
Trigger: CCGCCTCCTTCCAAATACCCACCCTGCCAGCAGCCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGCCTTCACTGGGGCCATaGGAAATTCACAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERPSLGP*EIHKVH
Trigger: ATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGG...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAATAGCAGGGTGCTGTTaGACAAGTCCGGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAIAGCC*TSPGES
Trigger: ACTCTCTCCCGGACTTGTTCAACAGCACCCTGCTAT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGTATGGTTCTGTGGATaGGGAGGCCATGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKVWFCG*GGHGLG
Trigger: GCCCAGCCCATGGCCTCCTCATCCACAGAACCATAC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACCAGTACCCCCTGAATaGTGCCAGGAGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKPVPPE*CQETGW
Trigger: CCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGAGCCCACTGGCATGTaGGGCAAGGAGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSREPTGM*GKEVNA
Trigger: AGCATTCACCTCCTTGCCTCACATGCCAGTGGGCTC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGTCACAGGCAGGGTTGTaGTTGAGCCCACTGGCATGT +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLSQAGL*LSPLAC
Trigger: ACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGA...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTAMPRV*GKGGPG
Trigger: TCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGC...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPAMPRV*GKGGPG
Trigger: TCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAATATCCCTATCAGATaGGTCCAGCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNANIPIR*VQLPGL
Trigger: GAGGCCAGGGAGCTGGACTCATCTGATAGGGATATT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGAAAGAGACTGTAGATaGGGGCTGGTCGGACAACTT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATERDCR*GLVGQL
Trigger: AAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGAAAGAGACTGTAGATaGGGGCTGGTCGGACAACTT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEERDCR*GLVGQL
Trigger: AAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGTCCAATGGTCTGCTTaGCAATGTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAVQWSA*QCWGSL
Trigger: CAGTGACCCCCAACATTGTCAAGCAGACCATTGGAC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAACTGGGGGAAGAAACTaGACTCCTTCTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEETGGRN*TPSCQS
Trigger: GCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAGCCAATGCCTCGAGCTaGTGCTGGTGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPANASS*CWWLHN
Trigger: ATTGTGAAGCCACCAGCATCAGCTCGAGGCATTGGC...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCAGTTGGTCAGGTGCATaGACTTATTGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSLQCPFVALASHFICIGSWSGA*TYCQGS
Trigger: AGAGCCTTGGCAATAAGTTCATGCACCTGACCAACT...GCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTCATCTTCTGTGCAGTaGCATGCTCTGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLSSSVQ*HALEPF
Trigger: GAATGGCTCCAGAGCATGTCACTGCACAGAAGATGA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTCCTCACTGTCCTTTaGGGAACTGGGTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVLTVL*GTGFLG
Trigger: CCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCACTGGCTTCTCTGCTaGGATATGAGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTHWLLC*DMRCQP
Trigger: TGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTGCACAGCAGAACATTaGGAAACCATGTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLCTAEH*ETMFVA
Trigger: TGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCA...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGTGCACAGCAGAACATTaGGAAACCATGTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVCTAEH*ETMFVA
Trigger: TGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCA...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAATAGTGACTGCTCCTaGAACCCACCTACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPNSDCS*NPPTKP
Trigger: CGGCTTGGTAGGTGGGTTTCAGGAGCAGTCACTATT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCTGATGCTGGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTADAGF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCCAGCATCAGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442769.5
CDS-3UTR GCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGTCCGGTAGTAGCAGCTaGATCCTTGAAGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKSGSSS*ILEVCQ
Trigger: CTGACAGACTTCAAGGATGCAGCTGCTACTACCGGA...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCCTGAGGGACCACTCTaGTTGAAGCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLPEGPL*LKLFFW
Trigger: CCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTCAGG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGCGTGGCAGGTACTGTaGCTGAGGGACCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKAWQVL*LRDHSA
Trigger: AGCAGAGTGGTCCCTCAGGCACAGTACCTGCCACGC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTGTTTTCCCCAGCCGCTaGCAAGCAGAGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPVFPSR*QAEVWF
Trigger: GAACCATACCTCTGCTTGGCAGCGGCTGGGGAAAAC...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLRPCVV*NKGTGV
Trigger: CACGCCAGTGCCTTTATTGCAGACCACACAGGGCCT...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTG +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSRPCVV*NKGTGV
Trigger: CACGCCAGTGCCTTTATTGCAGACCACACAGGGCCT...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTTATGGTCAACAGGCTaGGGTGCACAGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLWSTG*GAQSPV
Trigger: TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCTGGGACAGTGCCAATaGTTTTGGGCACCTTATGGT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLGQCQ*FWAPYG
Trigger: ACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTCATCAGCTGGGACAGTaGCAATGCTTTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTHQLGQ*QCFWAP
Trigger: AGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATG...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACATCAGCTGGGACAGTaGCAATGCTTTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAHQLGQ*QCFWAP
Trigger: AGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATCAAGCTGGCAGCCTTaGCTCGGCATCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPSSWQP*LGIFSK
Trigger: CTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGGGGACCTGGAGCTTTaGCTTCTCCAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTGDLEL*LLQMLR
Trigger: CCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp ACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGTGGAAGGCGAATACTTaGAACTGGCAAAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: TKPSVPICGPGKPFHLHWWKANT*NWQSGP
Trigger: TGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA...CCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCCACAAAGCCTTCAGTaGCCATTTGTGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTPQSLQ*PFVALA
Trigger: TGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAAAGGCTGGGCTCTTTaGTGGTGTCCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAKGWAL*WCPHCP
Trigger: AGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGTAGAAACCAAAACCTaGTTTATAAGGCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: QEMGSACCGLSACLLRKFVETKT*FIRLRG
Trigger: GCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCTAC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGCAAAAGAAATATGCTaGCTGGGGTGGGACGCCCAA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPAKEIC*LGWDAQ
Trigger: TTGGGCGTCCCACCCCAGCCAGCATATTTCTTTTGC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCCATGGGCTGGGCCATaGAGAAGACCATGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTPWAGP*RRPWKK
Trigger: CTTCTTCCATGGTCTTCTCCATGGCCCAGCCCATGG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGAGGTATGGTTCTGTaGATGAGGAGGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARGMVL*MRRPWA
Trigger: AGCCCATGGCCTCCTCATCCACAGAACCATACCTCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARQAGS*VAILAS
Trigger: TGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTGCCAGGAGACAGGCTaGATCTTGGGTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTCQETG*ILGGDT
Trigger: AGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTGGTGGATGTGTCGTaGGAGCTAGCGGTAGACAAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVVDVS*ELAVDK
Trigger: CTTGTCTACCGCTAGCTCCCACGACACATCCACCAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTAGGAAGAGGCAACACTaGTGGTGGATGTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPRKRQH*WWMCRG
Trigger: CCCACGACACATCCACCACCAGTGTTGCCTCTTCCT...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGGAAGAGGCAACACTaGTGGTGGATGTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRKRQH*WWMCRG
Trigger: CCCACGACACATCCACCACCAGTGTTGCCTCTTCCT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAACCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEPNLLS*ILGIRA
Trigger: AGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGG...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGCTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLLDCSS*QPCLGI
Trigger: GATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAG...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTTTGAGGACATTCCACTaGAAGCTGGGGTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTLRTFH*KLGFRK
Trigger: TTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCAA...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTACTGGCCCAGCTGGATaGAAGAGAGGCGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVTGPAG*KRGGWP
Trigger: TGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGT...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATCAGACTGGCCCAGCTaGATGGAAGAGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKSDWPS*MEERRV
Trigger: CACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDTVDEG*SDNFLM
Trigger: CATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGT...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTTVDEG*SDNFLM
Trigger: CATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGT...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGTCCTTCCTCCCAATCTaGAATGAGCCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKSFLPI*NEPGKW
Trigger: CCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGA...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTCCTTCCTCCCAATCTaGAATGAGCCTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATSFLPI*NEPGKW
Trigger: CCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CCA 90 bp TTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCAGCGAATACTTGCAACTaGCAAAGCGGACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: FHKAFSAHLWPWQAISSAANTCN*QSGPVH
Trigger: ATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGC...TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTTGCCAAGGCTCTTCATaGAAGGCGAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTCQGSS*KANTCN
Trigger: GTTGCAAGTATTCGCCTTCCATGAAGAGCCTTGGCA...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTCCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATATCCAGTGGAGAGCTaGAGTGGAGGCTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPYPVES*SGGLGK
Trigger: TTTCCCCAAGCCTCCACTCCAGCTCTCCACTGGATA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGATGCTGATATCCAGTaGAGAGCTGGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPDADIQ*RAGVEA
Trigger: AGCCTCCACTCCAGCTCTCCACTGGATATCAGCATC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTCTTGGATTTGGGCGTaGTCCCGTCTTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLSWIWA*SRLQRV
Trigger: TACTCTCTGAAGACGGGACCACGCCCAAATCCAAGA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGAGTCTTCTTGGATTTaGGCGTGGTCCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWESSWI*AWSRLQ
Trigger: CTGAAGACGGGACCACGCCCAAATCCAAGAAGACTC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGGCTGGGCTCTTTGCTaGTGTCCTCACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTGWALC*CPHCPL
Trigger: CAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEITGNV*VERLGS
Trigger: AGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGAT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTTATAAGGCTGCGTaGCCACCACTGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLYKAA*PPLASL
Trigger: CAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGCTACTGGGATTATCTaGGCTCCTTCACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLATGII*APSLGP
Trigger: TGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGC...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGCAAAAGAAATATGCTaGTTCCTCCCTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEAKEIC*FLPRPA
Trigger: AGCAGGCCGAGGGAGGAACCAGCATATTTCTTTTGC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGTCTCATGGCCTTGCTaGGGTAAGGTGCCACACACC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKVSWPC*GKVPHT
Trigger: GGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGAC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAGATGGGATCTTCCCTaGGATGGCAGAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRWDLP*DGRGQA
Trigger: AGCCTGGCCTCTGCCATCTCAGGGAAGATCCCATCT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCAAGGAGGTGAATGCTaGTACGCTTGGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATQGGEC*YAWYRR
Trigger: TCTTCTGTACCAAGCGTATCAGCATTCACCTCCTTG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAGGCAGGGTTGTGATTaGGCCCACTGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRQGCD*AHWHVR
Trigger: CCTCACATGCCAGTGGGCTCAATCACAACCCTGCCT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTAMPRV*GKGGPG
Trigger: TCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAGTCCAATGGTCTGCTTaGCAATGTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPVQWSA*QCWGSL
Trigger: CAGTGACCCCCAACATTGTCAAGCAGACCATTGGAC...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTCCAATGGTCTGCTTaGCAATGTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTVQWSA*QCWGSL
Trigger: CAGTGACCCCCAACATTGTCAAGCAGACCATTGGAC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTAAATGGTTTAGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: KPSVPICGPGKPFHLHWPKWFSF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCTAAACCATTT...AGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTAAATGGTTTAGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTKWFSF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCTAAACCATTT...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR TCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLADQSI*KEVNPQ
Trigger: CTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGC...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTADQSI*KEVNPQ
Trigger: CTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGCGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLQCPFVALASHFICIGLRHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...CAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAGGCTTGGGGAAATGTTaGCTTCCAGGACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTGLGKC*LPGPRA
Trigger: AGCCCTGGGTCCTGGAAGTCAACATTTCCCCAAGCC...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATCATCTTCTGTGCAGTaGCATGCTCTGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPSSSVQ*HALEPF
Trigger: GAATGGCTCCAGAGCATGTCACTGCACAGAAGATGA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAACAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEQLASL*FAEGIE
Trigger: CTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTG...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR TCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGGGGAAAGGCCAGCTTaGGTCTTCTTGGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRGERPA*VFLDLG
Trigger: GCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAGGGAGTCACTGATTaGCTGGAAAGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLEGVTD*LESGGS
Trigger: GCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTC...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAATTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTTTGGAAGGAGGCGGTaGAGACCCAAGACTAGGATG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPFGRRR*RPKTRM
Trigger: CATCCTAGTCTTGGGTCTTCACCGCCTCCTTCCAAA...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCACTTGCTGAGGTAAGGTaGCACACACCTCCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPLAEVR*HTPPVV
Trigger: TACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAG...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGGGAACTGCTGTGGCCTaGAATGACAGCCGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLGTAVA*NDSRGP
Trigger: GGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCC...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGTTATGGTCAACAGGCTaGGGTGCACAGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWLWSTG*GAQSPV
Trigger: TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAA...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGGGACAGTGCCAATaGTTTTGGGCACCTTATGGT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLGQCQ*FWAPYG
Trigger: ACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGACCGTCCAATGGTCTaGTTGACAATGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTDRPMV*LTMLGV
Trigger: GACCCCCAACATTGTCAAGCAGACCATTGGACGGTC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAATTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQLPKRL*IRDRFR
Trigger: GCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAA...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGGAAGGCGAATACTTaGAACTGGCAAAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAWKANT*NWQSGP
Trigger: TGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACGGAAATGATATCCTCTaGATTGGGCAGGACAAAACC +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDGNDIL*IGQDKT
Trigger: GGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCC...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATTTCTTCATCTTCTGTaGAGTGACATGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEFLHLL*SDMLWS
Trigger: GCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGACATCCAGCACAGATaGATAGAAGTCCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATDIQHR*IEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGACATCCAGCACAGATaGATAGAAGTCCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEDIQHR*IEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATTCCAGCTTCCAGATTaGCTTCACTTGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAFQLPD*LHLLMG
Trigger: GCCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATGGATGAGGAGGCCATaGGCTGGGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKWMRRP*AGPWRR
Trigger: TCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGATCTTCCCTGAGATaGCAGAGGCCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGSSLR*QRPGSS
Trigger: GGAAGAGCCTGGCCTCTGCCATCTCAGGGAAGATCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGAATTATTATTCAGCATaGGCTTATAGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQNYYSA*AYRRKR
Trigger: TCTCTTCCTCCTATAAGCCCATGCTGAATAATAATT...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCAATTATTATTCAGCATaGGCTTATAGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSNYYSA*AYRRKR
Trigger: TCTCTTCCTCCTATAAGCCCATGCTGAATAATAATT...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAGGCTGGATCTTGGGTaGCGATACTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRLDLG*RYWLQA
Trigger: GGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPRQAGS*VAILAS
Trigger: TGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCT...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPRQAGS*VAILAS
Trigger: TGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCT...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLQCQCF*APYGQQ
Trigger: CTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSGTGIS*DSANAF
Trigger: AAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCC...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAAAGAGGCAACACTGGTaGTGGATGTGTCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQKRQHW*WMCRGS
Trigger: GCTCCCACGACACATCCACCACCAGTGTTGCCTCTT...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVALPS*LSYSGY
Trigger: ATAACCGGAATAACTTAGCCATGAGGGCAGAGCCAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVALPS*LSYSGY
Trigger: ATAACCGGAATAACTTAGCCATGAGGGCAGAGCCAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGCAACTTTCTCATGATTaGAAAGGGGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVQLSHD*KGVWSE
Trigger: TTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTG...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATTVDEG*SDNFLM
Trigger: CATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATTGCTGATTTTGAAGTaGGACCGTCCAATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEELLILK*DRPMVC
Trigger: GCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp TCATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGATTCACAATCCACTTTTaGCGGCTGCTGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SWKANTCNWQSGPVHLKRFTIHF*RLLLSH
Trigger: GTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAA...TCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAGGTAAATCCGCAGAGGATTTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: CNWQSGPVHLKRGKSAEDFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...ATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCTGGAGTGGAGGCTTaGGGAAATGTTGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTAGVEA*GNVDFQ
Trigger: CTGGAAGTCAACATTTCCCCAAGCCTCCACTCCAGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAGATGCTGATATCCAGTaGAGAGCTGGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPDADIQ*RAGVEA
Trigger: AGCCTCCACTCCAGCTCTCCACTGGATATCAGCATC...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTCACGAATCATCTaGCCTTTGATGCTGATATCC +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDRSRII*PLMLIS
Trigger: GGATATCAGCATCAAAGGCCAGATGATTCGTGACCT...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATGCAGTGACATGCTCTaGAGCCATTCGACATTTGTC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEECSDML*SHSTFV
Trigger: GACAAATGTCGAATGGCTCCAGAGCATGTCACTGCA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAATCCGAACATCATCTaGTGTCAGGACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEENPNII*CQDIQH
Trigger: GTGCTGGATGTCCTGACACCAGATGATGTTCGGATT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGGCTGGGCTCTTTGCTaGTGTCCTCACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRGWALC*CPHCPL
Trigger: CAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAITGNV*VERLGS
Trigger: AGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGAT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGGTTCGGCATGTTGTaGCCTCTCCGCCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGFGML*PLRLST
Trigger: AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATGTCCTTTGAGGAACTaGGTTTCCCAGCTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEECPLRN*VSQLAS
Trigger: ACTAGCAAGCTGGGAAACCCAGTTCCTCAAAGGACA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
3UTR CAA 72 bp GCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTCTTTTTATTGACACTG +
Preference number: 4 (lower is better)
Translates to: AHLWPWQAISSA*AWYSAFFLLTL
Trigger: CAGTGTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLVSSTP*MMPGDR
Trigger: CCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGAC...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGCCAATGCCTCGAGCTaGTGCTGGTGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKANASS*CWWLHN
Trigger: ATTGTGAAGCCACCAGCATCAGCTCGAGGCATTGGC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAGTTGGTCAGGTGCATaGACTTATTGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWSWSGA*TYCQGS
Trigger: AGAGCCTTGGCAATAAGTTCATGCACCTGACCAACT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTAGTTGGTCAGGTGCATaGACTTATTGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AIDSLLAQVVPQSLQCPFSWSGA*TYCQGS
Trigger: AGAGCCTTGGCAATAAGTTCATGCACCTGACCAACT...AAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAACGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWERHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAAGATGGCGTCGCTATTaGCTCCCTTCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTRWRRY*LPSGSG
Trigger: ACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCT...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAAAAATTCGTTCAAACTaGCCACGGCGAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEKIRSN*PRRENS
Trigger: TGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTCTGCCCAGAGCACTTaGTCACAGGTAACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICSAQST*SQVTSG
Trigger: CCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGATATGTTTTCTCCTCTTaGGCTACAACTCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGYVFSS*ATTQQP
Trigger: TGGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATA...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCATCTCCGCCTGTCTACTaGGGAAGTTCAAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPSPPVY*GSSRVS
Trigger: AGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGA...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGCCTGAGGGACCACTCTaGTTGAAGCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLPEGPL*LKLFFW
Trigger: CCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTCAGG...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCCAGAAAGACTCCAGTTaGTGGTACGGTTTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATQKDSS*WYGFCL
Trigger: TAGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTG...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTTATGGTCAACAGGCTaGGGTGCACAGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTLWSTG*GAQSPV
Trigger: TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTCTGGGACAGTGCCAATaGTTTTGGGCACCTTATGGT +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPLGQCQ*FWAPYG
Trigger: ACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAG...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGGGGACCTGGAGCTTTaGCTTCTCCAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEGDLEL*LLQMLR
Trigger: CCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCC...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCTGGAAGGCGAATACTTaGAACTGGCAAAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSWKANT*NWQSGP
Trigger: TGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGGGAAATGATATCCTCTaGATTGGGCAGGACAAAACC +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKGNDIL*IGQDKT
Trigger: GGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCC...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATTCTGTGCAGTGACATaGTCTGGAGCCATTCGACAT +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAFCAVT*SGAIRH
Trigger: ATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTTCTTCATCTTCTGTaGAGTGACATGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATFLHLL*SDMLWS
Trigger: GCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACA +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEESLEV*PEHLIT
Trigger: TGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR GCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATESLEV*PEHLIT
Trigger: TGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGTAGAAACCAAAACCTaGTTTATAAGGCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLVETKT*FIRLRG
Trigger: GCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCTAC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCTTCCAGCTTCCAGATTaGCTTCACTTGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSFQLPD*LHLLMG
Trigger: GCCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAA...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGAGCTACATAAAGTGCTaGGGCAAAAGAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRSYIKC*GKRNML
Trigger: CAGCATATTTCTTTTGCCCCAGCACTTTATGTAGCT...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGAGGTATGGTTCTGTaGATGAGGAGGCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRRGMVL*MRRPWA
Trigger: AGCCCATGGCCTCCTCATCCACAGAACCATACCTCT...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTGGATCTTCCCTGAGATaGCAGAGGCCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVGSSLR*QRPGSS
Trigger: GGAAGAGCCTGGCCTCTGCCATCTCAGGGAAGATCC...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACCACTGGCGTGCTATTTaGCCACATGAAGGAATTATT +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDHWRAI*PHEGII
Trigger: AATAATTCCTTCATGTGGCCAAATAGCACGCCAGTG...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAQCQCF*APYGQQ
Trigger: CTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEVDKAI*ALASAG
Trigger: CCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTAC...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTVALPS*LSYSGY
Trigger: ATAACCGGAATAACTTAGCCATGAGGGCAGAGCCAC...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPPNLLS*ILGIRA
Trigger: AGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTTGGAAGAGAGGCGGGTaGCCACGTTGGCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVWKRGG*PRWLCQ
Trigger: TTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCA...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAATGGCCACCGATTCGCTaGGGGAGACAGCACTTAATG +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEWPPIR*GRQHLM
Trigger: CATTAAGTGCTGTCTCCCCCAGCGAATCGGTGGCCA...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATGGCCACCGATTCGCTaGGGGAGACAGCACTTAATG +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTWPPIR*GRQHLM
Trigger: CATTAAGTGCTGTCTCCCCCAGCGAATCGGTGGCCA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAGGACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: MEGEYLQLAKRTSPSEKRTVDEG*SDNFLM
Trigger: CATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGT...CCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNATVDEG*SDNFLM
Trigger: CATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATTGCTGATTTTGAAGTaGGACCGTCCAATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLLILK*DRPMVC
Trigger: GCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCGAATACTTGCAACTaGCAAAGCGGACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTANTCN*QSGPVH
Trigger: ATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAGGTTGCCAAGGCTCTTCATaGAAGGCGAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: WKANTCNWQSGPVHLKRGCQGSS*KANTCN
Trigger: GTTGCAAGTATTCGCCTTCCATGAAGAGCCTTGGCA...ACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATGCCAAGGCTCTTCATaGAAGGCGAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPCQGSS*KANTCN
Trigger: GTTGCAAGTATTCGCCTTCCATGAAGAGCCTTGGCA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGCCAAGGCTCTTCATaGAAGGCGAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNACQGSS*KANTCN
Trigger: GTTGCAAGTATTCGCCTTCCATGAAGAGCCTTGGCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCATTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGCTGGAGTGGAGGCTTaGGGAAATGTTGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRAGVEA*GNVDFQ
Trigger: CTGGAAGTCAACATTTCCCCAAGCCTCCACTCCAGC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGTCACGAATCATCTaGCCTTTGATGCTGATATCC +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATRSRII*PLMLIS
Trigger: GGATATCAGCATCAAAGGCCAGATGATTCGTGACCT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGAGGTCACGAATCATCTaGCCTTTGATGCTGATATCC +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLRSRII*PLMLIS
Trigger: GGATATCAGCATCAAAGGCCAGATGATTCGTGACCT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGCAGTGACATGCTCTaGAGCCATTCGACATTTGTC +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNACSDML*SHSTFV
Trigger: GACAAATGTCGAATGGCTCCAGAGCATGTCACTGCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAATCCGAACATCATCTaGTGTCAGGACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPNPNII*CQDIQH
Trigger: GTGCTGGATGTCCTGACACCAGATGATGTTCGGATT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGCTGGGCTCTTTGCTaGTGTCCTCACTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGWALC*CPHCPL
Trigger: CAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLITGNV*VERLGS
Trigger: AGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGAT...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACTGGGCAGAGGCTTTTaGAGAGAGGCCAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKLGRGF*REASYG
Trigger: CCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGATGGAAGGCGAATACTaGCTTCACAATCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: DGVAIDSLLAQVVPQSLQMEGEY*LHNPLL
Trigger: CAAAAGTGGATTGTGAAGCCAGTATTCGCCTTCCAT...CTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434241.1
CDS-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAATAGCAGGGTGCTGTTaGACAAGTCCGGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTIAGCC*TSPGES
Trigger: ACTCTCTCCCGGACTTGTTCAACAGCACCCTGCTAT...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAATAGCAGGGTGCTGTTaGACAAGTCCGGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKIAGCC*TSPGES
Trigger: ACTCTCTCCCGGACTTGTTCAACAGCACCCTGCTAT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCAAGGAGGTGAATGCTaGTACGCTTGGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTQGGEC*YAWYRR
Trigger: TCTTCTGTACCAAGCGTATCAGCATTCACCTCCTTG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTGCCTTCTCCAAATGCTaGGGAGTCAATTACAGATTC +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTAFSKC*GVNYRF
Trigger: GAATCTGTAATTGACTCCTCAGCATTTGGAGAAGGC...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGCCTTCTCCAAATGCTaGGGAGTCAATTACAGATTC +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPAFSKC*GVNYRF
Trigger: GAATCTGTAATTGACTCCTCAGCATTTGGAGAAGGC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTAATATCCCTATCAGATaGGTCCAGCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICNIPIR*VQLPGL
Trigger: GAGGCCAGGGAGCTGGACTCATCTGATAGGGATATT...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAAATGGTTTAGCTTCTaGTGCTCTCGAATGGATCGG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAKWFSF*CSRMDR
Trigger: CCGATCCATTCGAGAGCATCAGAAGCTAAACCATTT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGAGGATCGTAGGAAGTaGCATAAACATAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPEDRRK*HKHRSA
Trigger: TGCGGATCTATGTTTATGTCACTTCCTACGATCCTC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTADQSI*KEVNPQ
Trigger: CTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGC...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TKPSVPICGPGKPFHLHWRHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...CCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR TCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGTCGCACATACATCTTaGGCAGGCTGGTCACATAGG +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEVAHTS*AGWSHR
Trigger: CCTATGTGACCAGCCTGCTCAAGATGTATGTGCGAC...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGGTTTTCGTCTAGCATaGTGTCAAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEGFRLA*CQNQRV
Trigger: AACTCTTTGGTTTTGACATCATGCTAGACGAAAACC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAAAATTCGTTCAAACTaGCCACGGCGAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEKIRSN*PRRENS
Trigger: TGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR TCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCACAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPQLASL*FAEGIE
Trigger: CTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTG...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTQLASL*FAEGIE
Trigger: CTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGGTCCTCACTGTCCTTTaGGGAACTGGGTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLVLTVL*GTGFLG
Trigger: CCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGAC...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTCTGCCCAGAGCACTTaGTCACAGGTAACGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLSAQST*SQVTSG
Trigger: CCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGAGGGAGTCACTGATTaGCTGGAAAGTGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKEGVTD*LESGGS
Trigger: GCTTCCTCCACTTTCCAGTCAATCAGTGACTCCCTC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAACAGGTGACAGAGGGTaGCCCTTCCTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKTGDRG*PFLTFS
Trigger: GGAGAAGGTGAGGAAGGGTCACCCTCTGTCACCTGT...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTATGTTTTCTCCTCTTaGGCTACAACTCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATYVFSS*ATTQQP
Trigger: TGGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACAGAAAGACTCCAGTTaGTGGTACGGTTTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPQKDSS*WYGFCL
Trigger: TAGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPWPRWL*QEFEEK
Trigger: CTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCA...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTWPRWL*QEFEEK
Trigger: CTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATGTTGGGGGTCACTGTaGTCATCTTCCATCGGAGCA +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTCWGSL*SSSIGA
Trigger: TGCTCCGATGGAAGATGAGCACAGTGACCCCCAACA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGACCGTCCAATGGTCTaGTTGACAATGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKDRPMV*LTMLGV
Trigger: GACCCCCAACATTGTCAAGCAGACCATTGGACGGTC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTTCTGTGCAGTGACATaGTCTGGAGCCATTCGACAT +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPFCAVT*SGAIRH
Trigger: ATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAA...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTAAAGGCTGGGCTCTTTaGTGGTGTCCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICKGWAL*WCPHCP
Trigger: AGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTT...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAAAAGGCTGGGCTCTTTaGTGGTGTCCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEKGWAL*WCPHCP
Trigger: AGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTT...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTGCAAAAGAAATATGCTaGCTGGGGTGGGACGCCCAA +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICAKEIC*LGWDAQ
Trigger: TTGGGCGTCCCACCCCAGCCAGCATATTTCTTTTGC...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAGTTTTTGCCTATAGCTaGAGCGGCGGTATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTVFAYS*SGGIAG
Trigger: CCCTGCTATACCGCCGCTCCAGCTATAGGCAAAAAC...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRQAGS*VAILAS
Trigger: TGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACACTTTTGGGCACCTTATaGTCAACAGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTLLGTL*STGCGA
Trigger: TGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAG...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACTTTTGGGCACCTTATaGTCAACAGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKLLGTL*STGCGA
Trigger: TGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTCAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPQCQCF*APYGQQ
Trigger: CTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTG...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGTGIS*DSANAF
Trigger: AAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGAAGAGGCAACACTGGTaGTGGATGTGTCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLKRQHW*WMCRGS
Trigger: GCTCCCACGACACATCCACCACCAGTGTTGCCTCTT...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCCTTAGTTGGATCCTaGGAATCAGAGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTSLVGS*ESELSS
Trigger: GGATGACAGCTCTGATTCCCAGGATCCAACTAAGGA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTTGAGGACATTCCACTaGAAGCTGGGGTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTLRTFH*KLGFRK
Trigger: TTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCAA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATGGAAGAGAGGCGGGTaGCCACGTTGGCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKWKRGG*PRWLCQ
Trigger: TTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATTCAACTTTCTCATGATTaGAAAGGGGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PFVALASHFICIGLVLGIQLSHD*KGVWSE
Trigger: TTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTG...AATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp TCATGGAAGGCGAATACTTGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAGATTGCTGATTTTGAAGTaGGACCGTCCAATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SWKANTCNWQSGPVHLKRLLILK*DRPMVC
Trigger: GCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA...TCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATTCACAATCCACTTTTaGCGGCTGCTGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKFTIHF*RLLLSH
Trigger: GTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGCCATTTCATCTGCATTaGCCTGGTACTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLPFHLH*PGTRHS
Trigger: AGAATGCCGAGTACCAGGCCAATGCAGATGAAATGG...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAATCTTGGATTTGGGCGTaGTCCCGTCTTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQSWIWA*SRLQRV
Trigger: TACTCTCTGAAGACGGGACCACGCCCAAATCCAAGA...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTGAGTCTTCTTGGATTTaGGCGTGGTCCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICESSWI*AWSRLQ
Trigger: CTGAAGACGGGACCACGCCCAAATCCAAGAAGACTC...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATTCACAAAGGTGTCCTTTGATACATaGAGACAGGTAACAGCTACT +
Preference number: 4 (lower is better)
Translates to: QLLGLSGLLHWGHGKFTKVSFDT*RQVTAT
Trigger: AGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC...CTTTGTGAATTTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CCAGATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTGGTTTGTGTAGATACTaGCTTCACAATCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: PDGVAIDSLLAQVVPQSLGLCRY*LHNPLL
Trigger: CAAAAGTGGATTGTGAAGCCAGTATCTACACAAACC...AAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTGTCCTTTGAGGAACTaGGTTTCCCAGCTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTCPLRN*VSQLAS
Trigger: ACTAGCAAGCTGGGAAACCCAGTTCCTCAAAGGACA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR TCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTGTGAGGCAAGGAGGTaGATGCTGATACGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICCEARR*MLIRLV
Trigger: TACCAAGCGTATCAGCATTCACCTCCTTGCCTCACA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATGTGAGGCAAGGAGGTaGATGCTGATACGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKCEARR*MLIRLV
Trigger: TACCAAGCGTATCAGCATTCACCTCCTTGCCTCACA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAAGTTGGTCAGGTGCATaGACTTATTGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRSWSGA*TYCQGS
Trigger: AGAGCCTTGGCAATAAGTTCATGCACCTGACCAACT...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGGTTTTCGTCTAGCATaGTGTCAAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATGFRLA*CQNQRV
Trigger: AACTCTTTGGTTTTGACATCATGCTAGACGAAAACC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATCATCTTCTGTGCAGTaGCATGCTCTGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKSSSVQ*HALEPF
Trigger: GAATGGCTCCAGAGCATGTCACTGCACAGAAGATGA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAGGGGAAAGGCCAGCTTaGGTCTTCTTGGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKGERPA*VFLDLG
Trigger: GCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCC...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATTCTCTGCTGAGATATaGGGTGCCAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKFSAEI*GASQAD
Trigger: GTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTAATAGTGACTGCTCCTaGAACCCACCTACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVNSDCS*NPPTKP
Trigger: CGGCTTGGTAGGTGGGTTTCAGGAGCAGTCACTATT...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTCCTGAGGGACCACTCTaGTTGAAGCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICPEGPL*LKLFFW
Trigger: CCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTCAGG...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATGGAAGGCGAATACTTaGAACTGGCAAAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKWKANT*NWQSGP
Trigger: TGGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGGAAATGATATCCTCTaGATTGGGCAGGACAAAACC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTGNDIL*IGQDKT
Trigger: GGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTTTCTTCATCTTCTGTaGAGTGACATGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTFLHLL*SDMLWS
Trigger: GCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACA +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLESLEV*PEHLIT
Trigger: TGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACA +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPESLEV*PEHLIT
Trigger: TGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTESLEV*PEHLIT
Trigger: TGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACACTGGCGTGCTATTTaGCCACATGAAGGAATTATT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPHWRAI*PHEGII
Trigger: AATAATTCCTTCATGTGGCCAAATAGCACGCCAGTG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGCTTTTGGGCACCTTATaGTCAACAGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLLLGTL*STGCGA
Trigger: TGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAG...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAACAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQQCQCF*APYGQQ
Trigger: CTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTG...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAACTCTCCTTCTCAGACTaGCCCAGCTGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKLSFSD*PSWMEE
Trigger: CTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAG...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTTCACAATCCACTTTTaGCGGCTGCTGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLFTIHF*RLLLSH
Trigger: GTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGCGAATACTTGCAACTaGCAAAGCGGACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKANTCN*QSGPVH
Trigger: ATGGACTGGTCCGCTTTGCCAGTTGCAAGTATTCGC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATTCAGTGCCCATTTGTaGCCCTGGCAAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTFSAHL*PWQAIS
Trigger: TGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTATCCAGTGGAGAGCTaGAGTGGAGGCTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLYPVES*SGGLGK
Trigger: TTTCCCCAAGCCTCCACTCCAGCTCTCCACTGGATA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAAGGTCACGAATCATCTaGCCTTTGATGCTGATATCC +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPRSRII*PLMLIS
Trigger: GGATATCAGCATCAAAGGCCAGATGATTCGTGACCT...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACTATTTCTGTTCCCATTaGGTGGTGAGAATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDYFCSH*VVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATA...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTTATTTCTGTTCCCATTaGGTGGTGAGAATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTYFCSH*VVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATA...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEELSLLP*YFCSHW
Trigger: CCAATGGGAACAGAAATACCATGGCAACAAGCTTAA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTITGNV*VERLGS
Trigger: AGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGAT...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGCTTCCACCCTCCCCCTaGACTGTGTCCTTTGATACA +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLLPPSP*TVSFDT
Trigger: TGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAG...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCTCTCAACAGCACAATaGATCAAGCAGAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLSTAQ*IKQRKI
Trigger: TATTTTCCTCTGCTTGATCCATTGTGCTGTTGAGAG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000442769.5
CDS-3UTR TCA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTGCTATTTGGCCACATaGAGGAATTATTATTCAGCA +
Preference number: 4 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLCYLAT*RNYYSA
Trigger: TGCTGAATAATAATTCCTTCATGTGGCCAAATAGCA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAACAAGGAGGTGAATGCTaGTACGCTTGGTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEQGGEC*YAWYRR
Trigger: TCTTCTGTACCAAGCGTATCAGCATTCACCTCCTTG...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAGTTGGTCAGGTGCATaGACTTATTGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKSWSGA*TYCQGS
Trigger: AGAGCCTTGGCAATAAGTTCATGCACCTGACCAACT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGGTTTTCGTCTAGCATaGTGTCAAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPGFRLA*CQNQRV
Trigger: AACTCTTTGGTTTTGACATCATGCTAGACGAAAACC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAAAATTCGTTCAAACTaGCCACGGCGAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTKIRSN*PRRENS
Trigger: TGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTCAGAGCTACATAAAGTaGTGGGGCAAAAGAAATATG +
Preference number: 4 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTQSYIK*WGKRNM
Trigger: CATATTTCTTTTGCCCCAGCACTTTATGTAGCTCTG...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACAGAGCTACATAAAGTaGTGGGGCAAAAGAAATATG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAQSYIK*WGKRNM
Trigger: CATATTTCTTTTGCCCCAGCACTTTATGTAGCTCTG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTTATGGTCAACAGGCTaGGGTGCACAGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLLWSTG*GAQSPV
Trigger: TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATGTTGGGGGTCACTGTaGTCATCTTCCATCGGAGCA +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKCWGSL*SSSIGA
Trigger: TGCTCCGATGGAAGATGAGCACAGTGACCCCCAACA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKASHFI*IGLVLG
Trigger: GCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGC...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATTCTGTGCAGTGACATaGTCTGGAGCCATTCGACAT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKFCAVT*SGAIRH
Trigger: ATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGACATCCAGCACAGATaGATAGAAGTCCTGATCAGG +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKDIQHR*IEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGCTACATAAAGTGCTaGGGCAAAAGAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPSYIKC*GKRNML
Trigger: CAGCATATTTCTTTTGCCCCAGCACTTTATGTAGCT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGCTACATAAAGTGCTaGGGCAAAAGAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNASYIKC*GKRNML
Trigger: CAGCATATTTCTTTTGCCCCAGCACTTTATGTAGCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATCCTTAGTTGGATCCTaGGAATCAGAGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKSLVGS*ESELSS
Trigger: GGATGACAGCTCTGATTCCCAGGATCCAACTAAGGA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATCCTTAGTTGGATCCTaGGAATCAGAGCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTSLVGS*ESELSS
Trigger: GGATGACAGCTCTGATTCCCAGGATCCAACTAAGGA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKPNLLS*ILGIRA
Trigger: AGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACAACTTTCTCATGATTaGAAAGGGGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAQLSHD*KGVWSE
Trigger: TTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTGCCAAGGCTCTTCATaGAAGGCGAATACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICCQGSS*KANTCN
Trigger: GTTGCAAGTATTCGCCTTCCATGAAGAGCCTTGGCA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAGCCCATTTGTGGCCCTaGCAAGCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKAHLWP*QAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGC...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAATCCGAACATCATCTaGTGTCAGGACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKNPNII*CQDIQH
Trigger: GTGCTGGATGTCCTGACACCAGATGATGTTCGGATT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATATTTCTGTTCCCATTaGGTGGTGAGAATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SYGLTARRESLIDWKVEEYFCSH*VVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CCA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PITTIPPALQIPISIMQPLSLLP*YFCSHW
Trigger: CCAATGGGAACAGAAATACCATGGCAACAAGCTTAA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
3UTR CAA 72 bp CTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTaGCACTATAGAGAAACCACATCTCCTTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LAAQQNIEKPCL*HYRETTSPSTL
Trigger: GAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
3UTR CAA 72 bp CTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTaGTTGCACTATAGAGAAACCACATCTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LLAAQQNIEKPC*LHYRETTSPST
Trigger: GGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGATACAAGAGTTTAGTCTaGGGTTTGATTGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRYKSLV*GLIGSP
Trigger: TGGGCTTCCAATCAAACCTCAGACTAAACTCTTGTA...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GTGTCCTTTGATACATGGAGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTCAGAGCTACATAAAGTaGTGGGGCAAAAGAAATATG +
Preference number: 4 (lower is better)
Translates to: VSFDTWRQVTATGIIWAPQSYIK*WGKRNM
Trigger: CATATTTCTTTTGCCCCAGCACTTTATGTAGCTCTG...AGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCTCCATGTATCAAAGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACAGAAAGACTCCAGTTaGTGGTACGGTTTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKQKDSS*WYGFCL
Trigger: TAGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATTCCAGCTTCCAGATTaGCTTCACTTGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKFQLPD*LHLLMG
Trigger: GCCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGCTACATAAAGTGCTaGGGCAAAAGAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTSYIKC*GKRNML
Trigger: CAGCATATTTCTTTTGCCCCAGCACTTTATGTAGCT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCAACTTTCTCATGATTaGAAAGGGGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTQLSHD*KGVWSE
Trigger: TTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCTTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSLSLLP*YFCSHW
Trigger: CCAATGGGAACAGAAATACCATGGCAACAAGCTTAA...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCACTCTCAACAGCACAATaGATCAAGCAGAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPLSTAQ*IKQRKI
Trigger: TATTTTCCTCTGCTTGATCCATTGTGCTGTTGAGAG...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS-3UTR TCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTCGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICRHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACGGCATTCTTTTTATTaGCACTGTAGTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRHSFY*HCSWSG
Trigger: ACCTGACCAACTACAGTGTCAATAAAAAGAATGCCG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR GCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKWPRWL*QEFEEK
Trigger: CTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAATTATTATTCAGCATaGGCTTATAGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNANYYSA*AYRRKR
Trigger: TCTCTTCCTCCTATAAGCCCATGCTGAATAATAATT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CCA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAACACTGGCGTGCTATTTaGCCACATGAAGGAATTATT +
Preference number: 4 (lower is better)
Translates to: LRESQQLKNRCPRERHLEHWRAI*PHEGII
Trigger: AATAATTCCTTCATGTGGCCAAATAGCACGCCAGTG...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTATTTCTGTTCCCATTaGGTGGTGAGAATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTYFCSH*VVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGTTTTCGTCTAGCATaGTGTCAAAACCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGFRLA*CQNQRV
Trigger: AACTCTTTGGTTTTGACATCATGCTAGACGAAAACC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTAAAATTCGTTCAAACTaGCCACGGCGAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVKIRSN*PRRENS
Trigger: TGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGAGAAACCATGTTTGTTaGACTATAGAGAAACCACAT +
Preference number: 4 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLRNHVC*TIEKPH
Trigger: ATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCT...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAACCTTCACTGGGGCCATaGGAAATTCACAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKPSLGP*EIHKVH
Trigger: ATGAACTTTGTGAATTTCCCATGGCCCCAGTGAAGG...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATATTTCTGTTCCCATTaGGTGGTGAGAATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKYFCSH*VVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR TCA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGTGCTATTTGGCCACATaGAGGAATTATTATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLCYLAT*RNYYSA
Trigger: TGCTGAATAATAATTCCTTCATGTGGCCAAATAGCA...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR GCA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTAGAAACCATGTTTGTTaGACTATAGAGAAACCACAT +
Preference number: 4 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICRNHVC*TIEKPH
Trigger: ATGTGGTTTCTCTATAGTGCAACAAACATGGTTTCT...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CCA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAATTATTATTCAGCATaGGCTTATAGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TIPPALQIPISIMQPLQKNYYSA*AYRRKR
Trigger: TCTCTTCCTCCTATAAGCCCATGCTGAATAATAATT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp CCCCGGCTCGGCACCGGCTCCACGCTACTTCCTCCCTCGGCCTGCTaGGCTACCCGGCAGCCTCAGGCGCCCCTAGCAACCACGCACCGC +
Preference number: 5 (lower is better)
Translates to: PRLGTGSTLLPPSAC*ATRQPQAPLATTHR
Trigger: GCGGTGCGTGGTTGCTAGGGGCGCCTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAGTAGCGTGGAGCCGGTGCCGAGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392102.6
ENST00000415717.5
ENST00000437755.1
CDS GCA 90 bp TCGCCCCGGCTCGGCACCGGCTCCACGCTACTTCCTCCCTCGGCCTaGTGGGCTACCCGGCAGCCTCAGGCGCCCCTAGCAACCACGCAC +
Preference number: 5 (lower is better)
Translates to: SPRLGTGSTLLPPSA*WATRQPQAPLATTH
Trigger: GTGCGTGGTTGCTAGGGGCGCCTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAGTAGCGTGGAGCCGGTGCCGAGCCGGGGCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392102.6
ENST00000415717.5
ENST00000437755.1
CDS GCA 90 bp CTCGAGCTGATGCTGGTGGCTTCACAATCCACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCAGGAGCTTGGCGTCCTGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LELMLVASQSTFGGC*SPTLCAGAWRPGAG
Trigger: TCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACCAGCATCAGCTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS GCA 90 bp TGCCTCGAGCTGATGCTGGTGGCTTCACAATCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGCGCAGGAGCTTGGCGTCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CLELMLVASQSTFGG*CSPTLCAGAWRPGA
Trigger: TGCCCCAGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACCAGCATCAGCTCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS GCA 90 bp GCTTCCAGATTGGCTTCACTTGCTGATGGGCCTGAGGCCAGACTCTaGCCTCCGAGGGTTTCTCAGGTGGCGTGGCAGGTACTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: ASRLASLADGPEARL*PPRVSQVAWQVLCL
Trigger: CAGGCACAGTACCTGCCACGCCACCTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGGCCCATCAGCAAGTGAAGCCAATCTGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS CCA 90 bp CCCTGGCCTCCTCAGGTCTCTCCTTCTCAGACTGGCCCAGCTGGATaGAAGAGAGGCGGGTGGCCACGTTGGCTATGCCAAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: PWPPQVSPSQTGPAG*KRGGWPRWLCQEFE
Trigger: CTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAGACCTGAGGAGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp GCCATGAGGGGCCCACATCATGGCCACACGGTCTCATGGCCTTGCTaGGGTAAGGTGCCACACACCTCCGGTAGTAGCAGCTGCATCCTT +
Preference number: 5 (lower is better)
Translates to: AMRGPHHGHTVSWPC*GKVPHTSGSSSCIL
Trigger: AAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACACCGCCTGCTCCTGTaGAGGACATTCCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTHRLLL*RTFHWK
Trigger: CTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGCTTTGCGCAGGAGCTaGGCGTCCTGGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVALRRS*ASWGRI
Trigger: TATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGC...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGGCTTTGCGCAGGAGCTaGGCGTCCTGGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: VPICGPGKPFHLHWPGTRALRRS*ASWGRI
Trigger: TATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGC...CCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAGCCTTCAGTGCCCATTaGTGGCCCTGGCAAGCCATT +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTAFSAH*WPWQAI
Trigger: AATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGC...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGCCATTCGACATTaGTCCCCAGGGGAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVGAIRH*SPGEVG
Trigger: GCCCACCTCCCCTGGGGACAAATGTCGAATGGCTCC...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp TCTGGCGGAGGCCAATACTATAGTGCTGTGTTCCTGCTGAGGCCATaGGGGGCCCACATCATGGCCACACGGTCTCATGGCCTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SGGGQYYSAVFLLRP*GAHIMATRSHGLAE
Trigger: CTCAGCAAGGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTCATGGCCTCAGCAGGAACACAGCACTATAGTATTGGCCTCCGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS GCA 90 bp ACTGGCCCAGCTGGATGGAAGAGAGGCGGGTGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAGGGGGACCTGGAGCTTTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: TGPAGWKRGGWPRWL*QEFEEKGDLELCLL
Trigger: GAGAAGGCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp CTGGTGGTGGATGTGTCGTGGGAGCTAGCGGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGGACAGTGCCAATGCTTTTGGGCACC +
Preference number: 5 (lower is better)
Translates to: LVVDVSWELAVDKAI*ALASAGTVPMLLGT
Trigger: GGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTACCGCTAGCTCCCACGACACATCCACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp TCTCAGACTGGCCCAGCTGGATGGAAGAGAGGCGGGTGGCCACGTTaGCTATGCCAAGAGTTTGAGGAAAAGGGGGACCTGGAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SQTGPAGWKRGGWPR*LCQEFEEKGDLELC
Trigger: GCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGCTTTGCGCAGGAGCTaGGCGTCCTGGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: QEMGSACCGLSACLLRKFALRRS*ASWGRI
Trigger: TATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGG +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQVCPEH*ITGNVW
Trigger: CCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGAC...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp GCTGTTTTTCTGGCGGAGGCCAATACTATAGTGCTGTGTTCCTGCTaGGGCCATGAGGGGCCCACATCATGGCCACACGGTCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: AVFLAEANTIVLCSC*GHEGPTSWPHGLMA
Trigger: GGCCATGAGACCGTGTGGCCATGATGTGGGCCCCTCATGGCCTCAGCAGGAACACAGCACTATAGTATTGGCCTCCGCCAGAAAAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS TCA 90 bp CACCTTATGGTCAACAGGCTGCGGTGCACAGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGGCTGGATCTTGGGTGGCGATACTGG +
Preference number: 5 (lower is better)
Translates to: HLMVNRLRCTVSSTP*MMPGDRLDLGWRYW
Trigger: CCAGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 90 bp GCCCACATCATGGCCACACGGTCTCATGGCCTTGCTGAGGTAAGGTaGCACACACCTCCGGTAGTAGCAGCTGCATCCTTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AHIMATRSHGLAEVR*HTPPVVAAASLKSV
Trigger: GACAGACTTCAAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGACCGTGTGGCCATGATGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGTATAGCAGGGTGCTGTaGAACAAGTCCGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQYSRVL*NKSGRE
Trigger: CTCTCTCCCGGACTTGTTCAACAGCACCCTGCTATA...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGGAGACAGGCTGGATCTaGGGTGGCGATACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLETGWI*GGDTGF
Trigger: GAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTC...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGCACCGCCTGCTCCTGTaGAGGACATTCCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVHRLLL*RTFHWK
Trigger: CTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTG...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGGCTTTGCGCAGGAGCTaGGCGTCCTGGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: DGVAIDSLLAQVVPQSLQALRRS*ASWGRI
Trigger: TATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGC...CTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGCAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACGGAGCCATTCGACATTaGTCCCCAGGGGAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDGAIRH*SPGEVG
Trigger: GCCCACCTCCCCTGGGGACAAATGTCGAATGGCTCC...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGAGGGGAAAGGCCAGCTaGAGTCTTCTTGGATTTGGG +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQRGKAS*SLLGFG
Trigger: CCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCCT...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTGGCAGGGTGGGTATTaGGAAGGAGGCGGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLWQGGY*EGGGED
Trigger: GTCTTCACCGCCTCCTTCCAAATACCCACCCTGCCA...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp TTATGGTCAACAGGCTGCGGTGCACAGTCTCCAGTACCCCCTGAATaGTGCCAGGAGACAGGCTGGATCTTGGGTGGCGATACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LWSTGCGAQSPVPPE*CQETGWILGGDTGF
Trigger: GAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGACCATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp TATTGTCCAACCCCAAGGTATCTGAGGCACCAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCTGAGGAAACTGCTGATTTACCGCAG +
Preference number: 5 (lower is better)
Translates to: YCPTPRYLRHQGGPA*PIQHPPEETADLPQ
Trigger: CTGCGGTAAATCAGCAGTTTCCTCAGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTGGACAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp GATACGCTTGGTACAGAAGACTGTATTGTCCAACCCCAAGGTATCTaGGGCACCAGGGAGGACCCGCCTGACCGATCCAGCATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: DTLGTEDCIVQPQGI*GTREDPPDRSSILL
Trigger: CAGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTGGACAATACAGTCTTCTGTACCAAGCGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp AGGCGATATGGGCACTGGCATCAGCTGGGACAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAGGCTGCGGTGCACAGTCTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: RRYGHWHQLGQCQCF*APYGQQAAVHSLQY
Trigger: GTACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp GTGGGAGCTAGCGGTAGACAAGGCGATATGGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTTGGGCACCTTATGGTCAACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VGASGRQGDMGTGIS*DSANAFGHLMVNRL
Trigger: CAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTACCGCTAGCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp ACCGCAGGAGGTTTCCACCGCCTGCTCCTGTTGAGGACATTCCACTaGAAGCTGGGGTTCAGGAAACTAGACTGTTCAAGCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TAGGFHRLLLLRTFH*KLGFRKLDCSSWQP
Trigger: AGGCTGCCAGCTTGAACAGTCTAGTTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTGGAAACCTCCTGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp CACGCTTTGCGCAGGAGCTTGGCGTCCTGGGGCAGGATAAAGGACTaGGGGAAGAAACTGAACTCCTTCTTGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: HALRRSLASWGRIKD*GKKLNSFLPKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000434241.1
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS CCA 90 bp CTAGGCCTTCACTGGACTGGGACACTCTGCCCTCAGTACCATTTGTaGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCA +
Preference number: 5 (lower is better)
Translates to: LGLHWTGTLCPQYHL*PWQAISSALAWYSA
Trigger: TGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS-3UTR CAA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCAGATTGGCTTCACTaGCTGATGGGCCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKPDWLH*LMGLRP
Trigger: TGGCCTCAGGCCCATCAGCAAGTGAAGCCAATCTGG...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGGCAGAAAGACTCCAGTaGCTGGTACGGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQAERLQ*LVRFLP
Trigger: AGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTGC...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACACCGCCTGCTCCTGTaGAGGACATTCCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKHRLLL*RTFHWK
Trigger: CTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTG...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCCTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSGSGSSTKPSVPICGPGLHNPL*AAAALP
Trigger: TGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAG...GCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTGCCTTCAGTGCCCATTaGTGGCCCTGGCAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PSVPICGPGKPFHLHWPGAFSAH*WPWQAI
Trigger: AATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGC...ACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCCAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: QCPFVALASHFICIGLVLQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...GAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGAGGAAGCAGAAAGTCTaGAAGTCTGCCCAGAGCACT +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQRKQKV*KSAQST
Trigger: AGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCT...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGCCGCCAGACCCTGCTaGCTGCACAGCAGAACATTG +
Preference number: 5 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGAARPC*LHSRTL
Trigger: CAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp TGGATGGAAGAGAGGCGGGTGGCCACGTTGGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGAGCTTTGCCTTCTCCAAATGCTGAG +
Preference number: 5 (lower is better)
Translates to: WMEERRVATLAMPRV*GKGGPGALPSPNAE
Trigger: CTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 90 bp AAGGACTGGGGGAAGAAACTGAACTCCTTCTTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGCCATAGCCGGTCCTTCCTCCCAATC +
Preference number: 5 (lower is better)
Translates to: KDWGKKLNSFLPKRL*IRDRFRHSRSFLPI
Trigger: GATTGGGAGGAAGGACCGGCTATGGCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000434241.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS CCA 90 bp AGTCTCCAGTACCCCCTGAATGATGCCAGGAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCAGGCCCTGTGTGGTCTGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: SLQYPLNDARRQAGS*VAILASGPVWSAIK
Trigger: CTTTATTGCAGACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp TTCCGGTTATACCAGGAAGAGGCAACACTGGTGGTGGATGTGTCGTaGGAGCTAGCGGTAGACAAGGCGATATGGGCACTGGCATCAGCT +
Preference number: 5 (lower is better)
Translates to: FRLYQEEATLVVDVS*ELAVDKAIWALASA
Trigger: AGCTGATGCCAGTGCCCATATCGCCTTGTCTACCGCTAGCTCCCACGACACATCCACCACCAGTGTTGCCTCTTCCTGGTATAACCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp TCCCAAAACCCCAGAACCCTGTATTCCTCTAGGCCTTCACTGGACTaGGACACTCTGCCCTCAGTACCATTTGTGGCCCTGGCAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SQNPRTLYSSRPSLD*DTLPSVPFVALASH
Trigger: ATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAGAGGAATACAGGGTTCTGGGGTTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 90 bp GAACCTCCCAAAACCCCAGAACCCTGTATTCCTCTAGGCCTTCACTaGACTGGGACACTCTGCCCTCAGTACCATTTGTGGCCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: EPPKTPEPCIPLGLH*TGTLCPQYHLWPWQ
Trigger: TTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAGAGGAATACAGGGTTCTGGGGTTTTGGGAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS-3UTR CAA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACA +
Preference number: 5 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSTVPML*GTLWST
Trigger: TGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGT...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp AACCACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACGGGGGACCTGGAGCTTaGCCTTCTCCAAATGCTGAG +
Preference number: 5 (lower is better)
Translates to: NHISFHPPPGLCPLIHGDGGPGA*PSPNAE
Trigger: CTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCC...GTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGCTTTGCGCAGGAGCTaGGCGTCCTGGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPALRRS*ASWGRI
Trigger: TATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CAA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTGCCTTCAGTGCCCATTaGTGGCCCTGGCAAGCCATT +
Preference number: 5 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTAFSAH*WPWQAI
Trigger: AATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGC...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGGAGCCATTCGACATTaGTCCCCAGGGGAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAGAIRH*SPGEVG
Trigger: GCCCACCTCCCCTGGGGACAAATGTCGAATGGCTCC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGTGTCCTCACTGTCCTTaGAGGAACTGGGTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVCPHCP*RNWVSG
Trigger: CCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACA...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTAATGGGTTCGGCATGTaGTGGCCTCTCCGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTNGFGM*WPLRLS
Trigger: AGACAGGCGGAGAGGCCACAACATGCCGAACCCATT...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp TCTCAGGTGGCGTGGCAGGTACTGTGCCTGAGGGACCACTCTGCTTaGAGCTGTTTTTCTGGCGGAGGCCAATACTATAGTGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: SQVAWQVLCLRDHSA*SCFSGGGQYYSAVF
Trigger: GAACACAGCACTATAGTATTGGCCTCCGCCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTCAGGCACAGTACCTGCCACGCCACCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS TCA 90 bp AGTCCGGGAGAGAGTGTAGGTAACAGGAACTGCTGTGGCCTGCAATaGCAGCCGTGGTCCCAGAGCTACATAAAGTGCTGGGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: SPGESVGNRNCCGLQ*QPWSQSYIKCWGKR
Trigger: TCTTTTGCCCCAGCACTTTATGTAGCTCTGGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCCTGTTACCTACACTCTCTCCCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000437755.1
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp ACGGTTTTTGCCTATAGCTGGAGCGGCGGTATAGCAGGGTGCTGTTaGACAAGTCCGGGAGAGAGTGTAGGTAACAGGAACTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: TVFAYSWSGGIAGCC*TSPGESVGNRNCCG
Trigger: GCCACAGCAGTTCCTGTTACCTACACTCTCTCCCGGACTTGTTCAACAGCACCCTGCTATACCGCCGCTCCAGCTATAGGCAAAAACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000437755.1
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp CTGGGTAGAAAGGCTGGGCTCTTTGCTGGTGTCCTCACTGTCCTTTaGGGAACTGGGTTTCTGGGGATAAGGGGAAAGGCCAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LGRKAGLFAGVLTVL*GTGFLGIRGKASLS
Trigger: ACTCAAGCTGGCCTTTCCCCTTATCCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000472527.1
CDS GCA 90 bp CCAGAACCCTGTATTCCTCTAGGCCTTCACTGGACTGGGACACTCTaGCCTCAGTACCATTTGTGGCCCTGGCAAGCCATTTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PEPCIPLGLHWTGTL*PQYHLWPWQAISSA
Trigger: TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAGAGGAATACAGGGTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 90 bp ACTTCATGTGGTGACCCCAGCAGCCCAGCCAGTCATCGTTTCCTATaGGAGGTACATCAGGAATCAGCCTTGCTAACAGCTCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TSCGDPSSPASHRFL*EVHQESALLTAQSR
Trigger: CCTGGACTGAGCTGTTAGCAAGGCTGATTCCTGATGTACCTCCCATAGGAAACGATGACTGGCTGGGCTGCTGGGGTCACCACATGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467841.5
ENST00000480472.5
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATTGCTGGTACGGTTTTaGCCTATAGCTGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWELLVRF*PIAGAA
Trigger: CGCCGCTCCAGCTATAGGCAAAAACCGTACCAGCAA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGCACCGCCTGCTCCTGTaGAGGACATTCCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLHRLLL*RTFHWK
Trigger: CTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTG...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACGTCCAATGGTCTGCTaGACAATGTTGGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKRPMVC*TMLGVT
Trigger: AGTGACCCCCAACATTGTCAAGCAGACCATTGGACG...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTCGTCCAATGGTCTGCTaGACAATGTTGGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: PSVPICGPGKPFHLHWPGRPMVC*TMLGVT
Trigger: AGTGACCCCCAACATTGTCAAGCAGACCATTGGACG...ACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATCCAGGACCCAGGGCTaGAGGTTTTCGTCTAGCATG +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWESRTQG*RFSSSM
Trigger: CATGCTAGACGAAAACCTCAAGCCCTGGGTCCTGGA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGATGATATCCTCTGCATaGGGCAGGACAAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLMISSA*GRTKPA
Trigger: GGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCAT...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTGGCAGGGTGGGTATTaGGAAGGAGGCGGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLWQGGY*EGGGED
Trigger: GTCTTCACCGCCTCCTTCCAAATACCCACCCTGCCA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS GCA 90 bp GGCTGGATCTTGGGTGGCGATACTGGCTTCAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTGCTATTTGGCCACATGAAGGAATTA +
Preference number: 5 (lower is better)
Translates to: GWILGGDTGFRPCVV*NKGTGVLFGHMKEL
Trigger: TAATTCCTTCATGTGGCCAAATAGCACGCCAGTGCCTTTATTGCAGACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 90 bp CTGTTCAAGCTGGCAGCCTTGCCTCGGCATCTTCTCAAAGCCTCTTaGGGTCAATTTCCTCACGGCCTCAGTGAACCGAATCTCCTTAGT +
Preference number: 5 (lower is better)
Translates to: LFKLAALPRHLLKAS*GQFPHGLSEPNLLS
Trigger: ACTAAGGAGATTCGGTTCACTGAGGCCGTGAGGAAATTGACCGCAAGAGGCTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp CAAAGGGCAGAACATTGTAAGAAGGGAACCTCGAGGCCAAGGAGGTaGGAGGATGGGGTAAGGGATATGTGCTACAGGCTCACCTCTGTA +
Preference number: 5 (lower is better)
Translates to: QRAEHCKKGTSRPRR*EDGVRDMCYRLTSV
Trigger: TACAGAGGTGAGCCTGTAGCACATATCCCTTACCCCATCCTCCCACCTCCTTGGCCTCGAGGTTCCCTTCTTACAATGTTCTGCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475950.5
ENST00000480929.1
CDS CCA 90 bp CGCCATAGCCGGTCCTTCCTCCCAATCTGGAATGAGCCTGGGAAATaGTTTAGCTACAAAAGGGAAAAGGGTGAGTGCAGGAAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RHSRSFLPIWNEPGK*FSYKREKGECRKRA
Trigger: TGCCCTCTTCCTGCACTCACCCTTTTCCCTTTTGTAGCTAAACCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGACCGGCTATGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480929.1
ENST00000491899.1
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGAGGGACCACTCTGCTaGAAGCTGTTTTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATEGPLC*KLFFWR
Trigger: CCGCCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGTTTCCAGCTTCCAGATaGGCTTCACTTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRFPASR*ASLADG
Trigger: CCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAAA...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGTTGCTGGTACGGTTTTaGCCTATAGCTGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLLLVRF*PIAGAA
Trigger: CGCCGCTCCAGCTATAGGCAAAAACCGTACCAGCAA...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGAGACAGGCTGGATCTaGGGTGGCGATACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPETGWI*GGDTGF
Trigger: GAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACA +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLTVPML*GTLWST
Trigger: TGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGT...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGGGGGACCTGGAGCTTaGCCTTCTCCAAATGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAGGPGA*PSPNAE
Trigger: CTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACATTTCTTTTGCTGATTTaGAAGTGGGACCGTCCAATG +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTFLLLI*KWDRPM
Trigger: CATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAA...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACACAGTCATCGTTTCTTTaGCTGATTTTGAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTQSSFL*LILKWD
Trigger: GTCCCACTTCAAAATCAGCAAAAGAAACGATGACTG...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCCAGTCATCGTTTCTTTaGCTGATTTTGAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSQSSFL*LILKWD
Trigger: GTCCCACTTCAAAATCAGCAAAAGAAACGATGACTG...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp CAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: QSLQCPFVALASHFICIGMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...GCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CAA 90 bp CCAGATGGCGTCGCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: PDGVAIDSLLAQVVPQSLAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...AAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp GCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTCAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: AIDSLLAQVVPQSLQCPFQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...AAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGCGAATCATCTGGCCTTaGATGCTGATATCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVRIIWP*MLISSG
Trigger: TCCACTGGATATCAGCATCAAAGGCCAGATGATTCG...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGG +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVCPEH*ITGNVW
Trigger: CCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGG +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATVCPEH*ITGNVW
Trigger: CCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGAC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAGGAAGCAGAAAGTCTaGAAGTCTGCCCAGAGCACT +
Preference number: 5 (lower is better)
Translates to: QEMGSACCGLSACLLRKFRKQKV*KSAQST
Trigger: AGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCT...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCGCCGCCAGACCCTGCTaGCTGCACAGCAGAACATTG +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSAARPC*LHSRTL
Trigger: CAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGC...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp CTCAGCTGCCCCCTACATAGGCAAGAAACTCCAAGATACTGCAGCTaGACTGGAGATGTACGTGATCCACTGGAGTCTCTCACTGTACCC +
Preference number: 5 (lower is better)
Translates to: LSCPLHRQETPRYCS*TGDVRDPLESLTVP
Trigger: GGGTACAGTGAGAGACTCCAGTGGATCACGTACATCTCCAGTTCAGCTGCAGTATCTTGGAGTTTCTTGCCTATGTAGGGGGCAGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 90 bp AATTTCCTCACGGCCTCAGTGAACCGAATCTCCTTAGTTGGATCCTaGGAATCAGAGCTGTCATCCAGAGCACAGGAAAGTGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NFLTASVNRISLVGS*ESELSSRAQESGSA
Trigger: GGCAGAGCCACTTTCCTGTGCTCTGGATGACAGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGGTTCACTGAGGCCGTGAGGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp TGCGGTCAATTTCCTCACGGCCTCAGTGAACCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCTGTCATCCAGAGCACAGGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: CGQFPHGLSEPNLLS*ILGIRAVIQSTGKW
Trigger: CCACTTTCCTGTGCTCTGGATGACAGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGGTTCACTGAGGCCGTGAGGAAATTGACCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp ACATTCCACTGGAAGCTGGGGTTCAGGAAACTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATCTTCTCAAAGCCTCTTGCGGTCAAT +
Preference number: 5 (lower is better)
Translates to: TFHWKLGFRKLDCSS*QPCLGIFSKPLAVN
Trigger: ATTGACCGCAAGAGGCTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAGTTTCCTGAACCCCAGCTTCCAGTGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCCCAGATTGGCTTCACTaGCTGATGGGCCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSPDWLH*LMGLRP
Trigger: TGGCCTCAGGCCCATCAGCAAGTGAAGCCAATCTGG...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATTGCTGGTACGGTTTTaGCCTATAGCTGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNALLVRF*PIAGAA
Trigger: CGCCGCTCCAGCTATAGGCAAAAACCGTACCAGCAA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGAGCAGAAAGACTCCAGTaGCTGGTACGGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: CCGLSACLLRKFKGFSSGAERLQ*LVRFLP
Trigger: AGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTGC...TCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTCAAGCTGGCAGCCTaGCCTCGGCATCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATFKLAA*PRHLLK
Trigger: TTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATTCAAGCTGGCAGCCTaGCCTCGGCATCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEFKLAA*PRHLLK
Trigger: TTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp CCTCTCCGCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: PLRLSTEEVQGFLLRTAVRCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...CACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLRCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: TKPSVPICGPGKPFHLHWAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...CCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCGCCTTCAGTGCCCATTaGTGGCCCTGGCAAGCCATT +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSAFSAH*WPWQAI
Trigger: AATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGC...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCCTTCAGTGCCCATTaGTGGCCCTGGCAAGCCATT +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTAFSAH*WPWQAI
Trigger: AATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATCCAGGACCCAGGGCTaGAGGTTTTCGTCTAGCATG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNASRTQG*RFSSSM
Trigger: CATGCTAGACGAAAACCTCAAGCCCTGGGTCCTGGA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGCGAATCATCTGGCCTTaGATGCTGATATCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRRIIWP*MLISSG
Trigger: TCCACTGGATATCAGCATCAAAGGCCAGATGATTCG...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAATGATATCCTCTGCATaGGGCAGGACAAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEMISSA*GRTKPA
Trigger: GGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCAT...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGAACCTCACAGGAGCTTaGTTTTCCCAGCTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRNLTGA*FSQLAS
Trigger: ACTAGCAAGCTGGGAAAACAAAGCTCCTGTGAGGTT...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAVCPEH*ITGNVW
Trigger: CCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGAC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GTGACTGCTCCTGAAACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGGAGAAACCATGTTTGTaGCACTATAGAGAAACCACA +
Preference number: 5 (lower is better)
Translates to: VTAPETHLPSRQTLLAAQEKPCL*HYRETT
Trigger: TGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTC...CTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGTTTCAGGAGCAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GCGTGGCCACCACTGGCTTCTCTGCTGAGATATGAGGTGCCAGCCAGGCAGACAAAAATATCAGTGAGCTaGAAGACAGTCTATCTAGGG +
Preference number: 5 (lower is better)
Translates to: AWPPLASLLRYEVPARQTKISVS*KTVYLG
Trigger: CCCTAGATAGACTGTCTTCAAGCTCACTGATATTTT...TGTCTGCCTGGCTGGCACCTCATATCTCAGCAGAGAAGCCAGTGGTGGCCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATGTCCTCACTGTCCTTaGAGGAACTGGGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEECPHCP*RNWVSQ
Trigger: CTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGACA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS CCA 90 bp AATCAGAGCTGTCATCCAGAGCACAGGAAAGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTATACCAGGAAGAGGCAACACTGGTGG +
Preference number: 5 (lower is better)
Translates to: NQSCHPEHRKVALPS*LSYSGYTRKRQHWW
Trigger: CCACCAGTGTTGCCTCTTCCTGGTATAACCGGAATAACTTAGCCATGAGGGCAGAGCCACTTTCCTGTGCTCTGGATGACAGCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp TTGGGCAGGACAAAACCTGCCAGATTCAGAAGGTCACGAATCATCTaGCCTTTGATGCTGATATCCAGTGGAGAGCTGGAGTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LGRTKPARFRRSRII*PLMLISSGELEWRL
Trigger: AAGCCTCCACTCCAGCTCTCCACTGGATATCAGCATCAAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCAGGTTTTGTCCTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS CCA 90 bp GAAAGTCTTGAAGTCTGCCCAGAGCACTTGATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCTTTGCTGGTGTCCTCACTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: ESLEVCPEHLITGNV*VERLGSLLVSSLSF
Trigger: AAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000442769.5
ENST00000457313.5
ENST00000472527.1
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGAGGGACCACTCTGCTaGAAGCTGTTTTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTEGPLC*KLFFWR
Trigger: CCGCCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTTCCAGCTTCCAGATaGGCTTCACTTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATFPASR*ASLADG
Trigger: CCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGCAGAAAGACTCCAGTaGCTGGTACGGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATAERLQ*LVRFLP
Trigger: AGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTGC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGCAGAAAGACTCCAGTaGCTGGTACGGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEAERLQ*LVRFLP
Trigger: AGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTGC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAGAGACAGGCTGGATCTaGGGTGGCGATACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQETGWI*GGDTGF
Trigger: GAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTC...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CACATCTCCTTCCACCCTCCCCCTGGACTGTGTCCTTTGATACATGGAGACAGGGTACAGAAGACTGTATaGTCCAACCCCAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: HISFHPPPGLCPLIHGDRVQKTV*SNPKVS
Trigger: AGATACCTTGGGGTTGGACAATACAGTCTTCTGTAC...CCTGTCTCCATGTATCAAAGGACACAGTCCAGGGGGAGGGTGGAAGGAGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACGTCCAATGGTCTGCTaGACAATGTTGGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPRPMVC*TMLGVT
Trigger: AGTGACCCCCAACATTGTCAAGCAGACCATTGGACG...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCGGCATTAAACTGAACTCCTTCTaGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: PFVALASHFICIGLVLGIKLNSF*PKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTT...AATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTLHNPL*AAAALP
Trigger: TGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CAA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGCTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLLHNPL*AAAALP
Trigger: TGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAG...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACTGTAGTTGGTCAGGTGCATGAACTTATTGCCAAGGCTCTTCATGGAAGGCGACTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TVVGQVHELIAKALHGRRLHNPL*AAAALP
Trigger: TGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAG...TCGCCTTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCTGACCAACTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: SLQCPFVALASHFICIGLRCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...CAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GCCCATGCTCCTGGGCAGAGGCTTTTGGAGAGAGGCCAGTTATGGGCTCACAGCGACGAGATGATAGTTTaGACAACAACATCCTTTATC +
Preference number: 5 (lower is better)
Translates to: AHAPGQRLLERGQLWAHSDEMIV*TTTSFI
Trigger: GATAAAGGATGTTGTTGTCAAAACTATCATCTCGTC...GCTGTGAGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAGCATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATGATATCCTCTGCATaGGGCAGGACAAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATMISSA*GRTKPA
Trigger: GGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCAT...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAATGATATCCTCTGCATaGGGCAGGACAAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEMISSA*GRTKPA
Trigger: GGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCAT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS-3UTR CAA 90 bp GCCTGTCTACTGAGGAAGTTCAAGGGTTTCTCCTCAGGACAGCGGTGGGAGAGGGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: ACLLRKFKGFSSGQRWERVFLFP*GGENVE
Trigger: TTCAACATTCTCACCACCCAATGGGAACAGAAATAC...CCTCTCCCACCGCTGTCCTGAGGAGAAACCCTTGAACTTCCTCAGTAGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAAGGGGAAAGGCCAGCTaGAGTCTTCTTGGATTTGGG +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPRGKAS*SLLGFG
Trigger: CCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCCT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGTCCTCACTGTCCTTaGAGGAACTGGGTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNACPHCP*RNWVSG
Trigger: CCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp AAACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGG +
Preference number: 5 (lower is better)
Translates to: KPCLLHYRETTSPSTLPLVCPEH*ITGNVW
Trigger: CCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGAC...CAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAGGAAGCAGAAAGTCTaGAAGTCTGCCCAGAGCACT +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEERKQKV*KSAQST
Trigger: AGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp ACCCACCTACCAAGCCGCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAAGTATGTTTTCTCCTCTaGAGCTACAACTCAGCAACC +
Preference number: 5 (lower is better)
Translates to: THLPSRQTLLAAQQNIEKVCFLL*SYNSAT
Trigger: GGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATAC...TTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGCGGCTTGGTAGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAACTGGGTTTCCCAGCTaGCTAGTCTCTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEETGFPS*LVSDLL
Trigger: CAGCAAATCAGAGACTAGCAAGCTGGGAAACCCAGT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS GCA 90 bp GCTGGGGCTGGAAATGATATCCTCTGCATTGGGCAGGACAAAACCTaGCAGATTCAGAAGGTCACGAATCATCTGGCCTTTGATGCTGAT +
Preference number: 5 (lower is better)
Translates to: AGAGNDILCIGQDKT*QIQKVTNHLAFDAD
Trigger: ATCAGCATCAAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCCAGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS GCA 90 bp AAACCACAGCTAAACTCATCTCCTTTATCCCACCTCAGTCCCGCATaGAGGAAGACCCTCCCCAGATTTAACGAAGTAGAGAGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: KPQLNSSPLSHLSPA*RKTLPRFNEVESLH
Trigger: ATGGAGGCTCTCTACTTCGTTAAATCTGGGGAGGGTCTTCCTGCATGCGGGACTGAGGTGGGATAAAGGAGATGAGTTTAGCTGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 90 bp AAACTCCAAGATACTGCAGCTGAACTGGAGATGTACGTGATCCACTaGAGTCTCTCACTGTACCCCCGTCCTGTACTTTCTCCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KLQDTAAELEMYVIH*SLSLYPRPVLSPLY
Trigger: GTACAGAGGAGAAAGTACAGGACGGGGGTACAGTGAGAGACTCCAGTGGATCACGTACATCTCCAGTTCAGCTGCAGTATCTTGGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTATAGCAGGGTGCTGTaGAACAAGTCCGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTYSRVL*NKSGRE
Trigger: CTCTCTCCCGGACTTGTTCAACAGCACCCTGCTATA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAATGGAAGAAGTGGCCTaGTTGGCAGTGAGACTGACA +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPMEEVA*LAVRLT
Trigger: TGTCAGTCTCACTGCCAACAAGGCCACTTCTTCCAT...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGAAACCAAAACCTGCTTTATAAGGCTGCGTGGCCACCACTGGCTTCTCTGCTGACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACA +
Preference number: 5 (lower is better)
Translates to: RNQNLLYKAAWPPLASLLTVPML*GTLWST
Trigger: TGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGT...CAGCAGAGAAGCCAGTGGTGGCCACGCAGCCTTATAAAGCAGGTTTTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAGTACAGAAGACTGTATaGTCCAACCCCAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEVQKTV*SNPKVS
Trigger: AGATACCTTGGGGTTGGACAATACAGTCTTCTGTAC...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGGGGGACCTGGAGCTTaGCCTTCTCCAAATGCTGAG +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKGGPGA*PSPNAE
Trigger: CTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TTCCACAAAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCAAAACTGAACTCCTTCTaGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: FHKAFSAHLWPWQAISSAKLNSF*PKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTT...TGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp TCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: SVPICGPGKPFHLHWPGTRCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...AGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACACAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACAGATGGCGTCGCTATaGACTCCCTTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKQMASL*TPFWLR
Trigger: CCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATGGGTGGTGAGAATGTaGAAATATCGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEWVVRM*KYRGCS
Trigger: TGAGCAGCCACGATATTTCAACATTCTCACCACCCA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCAAGACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTCCTTTAAGCTaGTTGCCATGGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: PKTRMTGNGFGMLWPLRLSTPLS*LPWYFC
Trigger: ACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGA...CAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGTCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGAGGAAGTTCGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: QEMGSACCGLSACLLRKFDLLKA*SITSSF
Trigger: AAAGGATGACGTGATACTCAATGCCTTCAGCAAATC...GAACTTCCTCAGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAAGGGGAAAGGCCAGCTaGAGTCTTCTTGGATTTGGG +
Preference number: 5 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPRGKAS*SLLGFG
Trigger: CCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCCT...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAAATGGGTTCGGCATGTaGTGGCCTCTCCGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKNGFGM*WPLRLS
Trigger: AGACAGGCGGAGAGGCCACAACATGCCGAACCCATT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACTGGGTTTCCCAGCTaGCTAGTCTCTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNATGFPS*LVSDLL
Trigger: CAGCAAATCAGAGACTAGCAAGCTGGGAAACCCAGT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS TCA 90 bp AATTACAGATTCACAGGCAGGGTTGTGATTGAGCCCACTGGCATGTaGGGCAAGGAGGTGAATGCTGATACGCTTGGTACAGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: NYRFTGRVVIEPTGM*GKEVNADTLGTEDC
Trigger: ACAGTCTTCTGTACCAAGCGTATCAGCATTCACCTCCTTGCCTCACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGAATCTGTAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 90 bp CAAAGCCTTCAGTGCCTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGTGACATAAAC +
Preference number: 5 (lower is better)
Translates to: QSLQCLATGKADQSI*KEVNPQRIVGSDIN
Trigger: GTTTATGTCACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGGCACTGAAGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448224.1
CDS GCA 90 bp TCACTGATTGACTGGAAAGTGGAGGAAGCAGAAAGTCTTGAAGTCTaGCCAGAGCACTTGATCACAGGTAACGTCTGGGTAGAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLIDWKVEEAESLEV*PEHLITGNVWVERL
Trigger: CAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCTCCACTTTCCAGTCAATCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000442769.5
ENST00000457313.5
ENST00000472527.1
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTGAGGGACCACTCTGCTaGAAGCTGTTTTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICEGPLC*KLFFWR
Trigger: CCGCCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTC...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCGTACAGAAGACTGTATaGTCCAACCCCAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATVQKTV*SNPKVS
Trigger: AGATACCTTGGGGTTGGACAATACAGTCTTCTGTAC...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAATTTCTTTTGCTGATTTaGAAGTGGGACCGTCCAATG +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWEFLLLI*KWDRPM
Trigger: CATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAA...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AAGCCTTCAGTGCCCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTTTTCTTTTGCTGATTTaGAAGTGGGACCGTCCAATG +
Preference number: 5 (lower is better)
Translates to: KPSVPICGPGKPFHLHWPFLLLI*KWDRPM
Trigger: CATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAA...AGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CAA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGAAACTGAACTCCTTCTaGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWKLNSF*PKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTAAACTGAACTCCTTCTaGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTKLNSF*PKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTT...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKLHNPL*AAAALP
Trigger: TGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATGGGTGGTGAGAATGTaGAAATATCGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAWVVRM*KYRGCS
Trigger: TGAGCAGCCACGATATTTCAACATTCTCACCACCCA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGACAGGTAACAGCTACTGGGATTATCTGGGCTCCTTCACTGGGGCCATGGGAAACTCCTTTAAGCTTGTaGCCATGGTATTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: RQVTATGIIWAPSLGPWETPLSL*PWYFCS
Trigger: GGAACAGAAATACCATGGCAACAAGCTTAAAGGAGT...TTCCCATGGCCCCAGTGAAGGAGCCCAGATAATCCCAGTAGCTGTTACCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTDLLKA*SITSSF
Trigger: AAAGGATGACGTGATACTCAATGCCTTCAGCAAATC...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAACCTCACAGGAGCTTaGTTTTCCCAGCTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNANLTGA*FSQLAS
Trigger: ACTAGCAAGCTGGGAAAACAAAGCTCCTGTGAGGTT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAGGAAGCAGAAAGTCTaGAAGTCTGCCCAGAGCACT +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRKQKV*KSAQST
Trigger: AGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGTAGCAGCTGCATCCTaGAAGTCTGTCAGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPVAAAS*KSVSLK
Trigger: TTTCAGACTGACAGACTTCAAGGATGCAGCTGCTAC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392102.6
ENST00000442769.5
CDS TCA 90 bp CACCACTGTCACATACTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGTGACATAAAC +
Preference number: 5 (lower is better)
Translates to: HHCHILATGKADQSI*KEVNPQRIVGSDIN
Trigger: GTTTATGTCACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS GCA 90 bp ACTCTGCCCTCAGTACCATTTGTGGCCCTGGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGCATTCTTTTTATTGACACTGTAGTT +
Preference number: 5 (lower is better)
Translates to: TLPSVPFVALASHFI*IGLVLGILFIDTVV
Trigger: AACTACAGTGTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 90 bp ATAGATGGTAGGGGGAACGTTGGGAAAGAGACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATGATTGGAAAGGGGTTTGGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: IDGRGNVGKETVDEG*SDNFLMIGKGFGQN
Trigger: ATTCTGACCAAACCCCTTTCCAATCATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTCCCAACGTTCCCCCTACCATCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
CDS CCA 90 bp GCGAGAAAACTCATCTTCCATCTCAACCAGAATCCGAACATCATCTaGTGTCAGGACATCCAGCACAGATGCATAGAAGTCCTGATCAGG +
Preference number: 5 (lower is better)
Translates to: ARKLIFHLNQNPNII*CQDIQHRCIEVLIR
Trigger: CCTGATCAGGACTTCTATGCATCTGTGCTGGATGTCCTGACACCAGATGATGTTCGGATTCTGGTTGAGATGGAAGATGAGTTTTCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS CCA 90 bp CCAATATTGTCAGAGGATACCTCACCACTGTCACATACTTGCAACTaGCAAAGCGGACCAGTCCATCTGAAAAGAGGTAAATCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: PILSEDTSPLSHTCN*QSGPVHLKRGKSAE
Trigger: CTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTGAGGTATCCTCTGACAATATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTATAGCAGGGTGCTGTaGAACAAGTCCGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICYSRVL*NKSGRE
Trigger: CTCTCTCCCGGACTTGTTCAACAGCACCCTGCTATA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACATTCAAGCTGGCAGCCTaGCCTCGGCATCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTFKLAA*PRHLLK
Trigger: TTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAA...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCAGTACAGAAGACTGTATaGTCCAACCCCAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPVQKTV*SNPKVS
Trigger: AGATACCTTGGGGTTGGACAATACAGTCTTCTGTAC...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACGTCCAATGGTCTGCTaGACAATGTTGGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRPMVC*TMLGVT
Trigger: AGTGACCCCCAACATTGTCAAGCAGACCATTGGACG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTTCTTTTGCTGATTTaGAAGTGGGACCGTCCAATG +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATFLLLI*KWDRPM
Trigger: CATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTAAACTGAACTCCTTCTaGCCAAAGCGGCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTKLNSF*PKRLCI
Trigger: TATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000457313.5
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTATGGAAGGCGAATACTaGCAACTGGCAAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICMEGEY*QLAKRT
Trigger: GGTCCGCTTTGCCAGTTGCAAGTATTCGCCTTCCAT...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAAGGTGCATGAACTTATaGCCAAGGCTCTTCATGGAA +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNARCMNL*PRLFME
Trigger: TTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCT...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTC +
Preference number: 5 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTAISSA*AWYSAF
Trigger: GAATGCCGAGTACCAGGCCAATGCAGATGAAATGGC...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTCGAATCATCTGGCCTTaGATGCTGATATCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTRIIWP*MLISSG
Trigger: TCCACTGGATATCAGCATCAAAGGCCAGATGATTCG...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCTGGGTGGTGAGAATGTaGAAATATCGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSWVVRM*KYRGCS
Trigger: TGAGCAGCCACGATATTTCAACATTCTCACCACCCA...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTGGGTGGTGAGAATGTaGAAATATCGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTWVVRM*KYRGCS
Trigger: TGAGCAGCCACGATATTTCAACATTCTCACCACCCA...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEVFLFP*GGENVE
Trigger: TTCAACATTCTCACCACCCAATGGGAACAGAAATAC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEEDLLKA*SITSSF
Trigger: AAAGGATGACGTGATACTCAATGCCTTCAGCAAATC...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAATTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATC +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEELLVSD*LKALSI
Trigger: GATACTCAATGCCTTCAGCAAATCAGAGACTAGCAA...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATC +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATLLVSD*LKALSI
Trigger: GATACTCAATGCCTTCAGCAAATCAGAGACTAGCAA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACTTTGTTTTCCCAGCTaGCTAGTCTCTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNALCFPS*LVSDLL
Trigger: CAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
CDS-3UTR CAA 90 bp GGCCATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAAACCTCACAGGAGCTTaGTTTTCCCAGCTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: GHGKFTKFIDPLTPQRKPNLTGA*FSQLAS
Trigger: ACTAGCAAGCTGGGAAAACAAAGCTCCTGTGAGGTT...TGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATGTCCTCACTGTCCTTaGAGGAACTGGGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKCPHCP*RNWVSQ
Trigger: CTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGACA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS TCA 90 bp TACCACTGTCACATACTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGTGACATAAAC +
Preference number: 5 (lower is better)
Translates to: YHCHILATGKADQSI*KEVNPQRIVGSDIN
Trigger: GTTTATGTCACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CCA 90 bp CTTTCTGAGGGCAGGGAGGGCACATCACCTTTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGGGTGGTGAGAATGTTGAAATATCGT +
Preference number: 5 (lower is better)
Translates to: LSEGREGTSPLSLLP*YFCSHWVVRMLKYR
Trigger: ACGATATTTCAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGTGATGTGCCCTCCCTGCCCTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTTTCCAGCTTCCAGATaGGCTTCACTTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICFPASR*ASLADG
Trigger: CCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAAA...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTATGGAAGAAGTGGCCTaGTTGGCAGTGAGACTGACA +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICMEEVA*LAVRLT
Trigger: TGTCAGTCTCACTGCCAACAAGGCCACTTCTTCCAT...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAATGGAAGAAGTGGCCTaGTTGGCAGTGAGACTGACA +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKMEEVA*LAVRLT
Trigger: TGTCAGTCTCACTGCCAACAAGGCCACTTCTTCCAT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATTTCTTTTGCTGATTTaGAAGTGGGACCGTCCAATG +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPFLLLI*KWDRPM
Trigger: CATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCCAGACCCTGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTCAGTCATCGTTTCTTTaGCTGATTTTGAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: ARPCLLHSRTLRNHVCCTQSSFL*LILKWD
Trigger: GTCCCACTTCAAAATCAGCAAAAGAAACGATGACTG...AGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCAGGGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCACAGTCATCGTTTCTTTaGCTGATTTTGAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAQSSFL*LILKWD
Trigger: GTCCCACTTCAAAATCAGCAAAAGAAACGATGACTG...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GCTATTGACTCCCTTCTGGCTCAGGTAGTTCCACAAAGCCTTCAGTGCCCATTTCAGTCATCGTTTCTTTaGCTGATTTTGAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: AIDSLLAQVVPQSLQCPFQSSFL*LILKWD
Trigger: GTCCCACTTCAAAATCAGCAAAAGAAACGATGACTG...AAATGGGCACTGAAGGCTTTGTGGAACTACCTGAGCCAGAAGGGAGTCAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417196.5
CDS-3UTR CAA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATCCAGGACCCAGGGCTaGAGGTTTTCGTCTAGCATG +
Preference number: 5 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKSRTQG*RFSSSM
Trigger: CATGCTAGACGAAAACCTCAAGCCCTGGGTCCTGGA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNAVFLFP*GGENVE
Trigger: TTCAACATTCTCACCACCCAATGGGAACAGAAATAC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCTCTACTCCTTTAAGCTaGTTGCCATGGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: PHHYHPSGPTNTHLYNATSTPLS*LPWYFC
Trigger: ACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGA...GGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCATTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATC +
Preference number: 5 (lower is better)
Translates to: PITTIPPALQIPISIMQPLLVSD*LKALSI
Trigger: GATACTCAATGCCTTCAGCAAATCAGAGACTAGCAA...TGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp ACTAGGATGACAGGAAATGGGTTCGGCATGTTGTGGCCTCTCCGCCTGTCTACTATTGAGAAACCATGTTaGTTGCACTATAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: TRMTGNGFGMLWPLRLSTIEKPC*LHYRET
Trigger: GGTTTCTCTATAGTGCAACAAACATGGTTTCTCAAT...AGTAGACAGGCGGAGAGGCCACAACATGCCGAACCCATTTCCTGTCATCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAGTAGCAGCTGCATCCTaGAAGTCTGTCAGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQVAAAS*KSVSLK
Trigger: TTTCAGACTGACAGACTTCAAGGATGCAGCTGCTAC...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTTATGGGCTCACAGCCAGGAGGGAGTCACTGATTGACTGGAAAGTGGAGGAAAGATCTTTAAGCTTGTaGCCATGGTATTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SYGLTARRESLIDWKVEERSLSL*PWYFCS
Trigger: GGAACAGAAATACCATGGCAACAAGCTTAAAGATCT...TTCCTCCACTTTCCAGTCAATCAGTGACTCCCTCCTGGCTGTGAGCCCATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417855.1
CDS TCA 90 bp TCGCCTTTAGTAAGTCTGGAGGCAAGGGACTCATTCATTCCAATGTaGGACCAGAAGTCCTCTTTACACATATTCAGCTTGGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: SPLVSLEARDSFIPM*DQKSSLHIFSLGEW
Trigger: CCATTCTCCCAAGCTGAATATGTGTAAAGAGGACTTCTGGTCTCACATTGGAATGAATGAGTCCCTTGCCTCCAGACTTACTAAAGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS GCA 90 bp AAATCCCCAATATTGTCAGAGGATACCTCACCACTGTCACATACTTaGAACTGGCAAAGCGGACCAGTCCATCTGAAAAGAGGTAAATCC +
Preference number: 5 (lower is better)
Translates to: KSPILSEDTSPLSHT*NWQSGPVHLKRGKS
Trigger: GGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTGAGGTATCCTCTGACAATATTGGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS-3UTR CAA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGATGGAAGAAGTGGCCTaGTTGGCAGTGAGACTGACA +
Preference number: 5 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLMEEVA*LAVRLT
Trigger: TGTCAGTCTCACTGCCAACAAGGCCACTTCTTCCAT...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CATGGGAAATTCACAAAGTTCATAGACCCTCTCACACCTCAGAGAAAGCCAACAACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACA +
Preference number: 5 (lower is better)
Translates to: HGKFTKFIDPLTPQRKPTTVPML*GTLWST
Trigger: TGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGT...TGTTGGCTTTCTCTGAGGTGTGAGAGGGTCTATGAACTTTGTGAATTTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAATTCAAGCTGGCAGCCTaGCCTCGGCATCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKFKLAA*PRHLLK
Trigger: TTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAA...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAACGAATCATCTGGCCTTaGATGCTGATATCCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKRIIWP*MLISSG
Trigger: TCCACTGGATATCAGCATCAAAGGCCAGATGATTCG...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTACTCCTTTAAGCTTGTaGCCATGGTATTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTTPLSL*PWYFCS
Trigger: GGAACAGAAATACCATGGCAACAAGCTTAAAGGAGT...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCATCTACTCCTTTAAGCTaGTTGCCATGGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNASTPLS*LPWYFC
Trigger: ACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGA...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: HHYHPSGPTNTHLYNATTDLLKA*SITSSF
Trigger: AAAGGATGACGTGATACTCAATGCCTTCAGCAAATC...AGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCTTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATC +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSLLVSD*LKALSI
Trigger: GATACTCAATGCCTTCAGCAAATCAGAGACTAGCAA...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAACTTTGTTTTCCCAGCTaGCTAGTCTCTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SKDLRRPPQIQNKGFPVQLCFPS*LVSDLL
Trigger: CAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAG...TTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGGACGAGATGATAGTTTaGACAACAACATCCTTTATC +
Preference number: 5 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWDEMIV*TTTSFI
Trigger: GATAAAGGATGTTGTTGTCAAAACTATCATCTCGTC...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp TCTCCCCATCACTACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAGACGAGATGATAGTTTaGACAACAACATCCTTTATC +
Preference number: 5 (lower is better)
Translates to: SPHHYHPSGPTNTHLYNADEMIV*TTTSFI
Trigger: GATAAAGGATGTTGTTGTCAAAACTATCATCTCGTC...TGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGTAGTGATGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp GACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTCTTTGTTTTCCCAGCTaGCTAGTCTCTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: DLRRPPQIQNKGFPVQICLCFPS*LVSDLL
Trigger: CAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAG...ACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp GAAGTAAGGACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCGAGAAACCATGTTTGTaGCACTATAGAGAAACCACA +
Preference number: 5 (lower is better)
Translates to: EVRTSEDPLKFRTKDFRSEKPCL*HYRETT
Trigger: TGTGGTTTCTCTATAGTGCAACAAACATGGTTTCTC...GGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGTCCTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp AACCATGTTTGTTGCACTATAGAGAAACCACATCTCCTTCCACCCTCCCCCTGGATTGAGAAACCATGTTaGTTGCACTATAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: NHVCCTIEKPHLLPPSPWIEKPC*LHYRET
Trigger: GGTTTCTCTATAGTGCAACAAACATGGTTTCTCAAT...CCAGGGGGAGGGTGGAAGGAGATGTGGTTTCTCTATAGTGCAACAAACATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS TCA 90 bp TCCAAACCATCTACTAGTTCTTCTTCTGTATCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTAGCTGAACTAATATCCCTATCAGAT +
Preference number: 5 (lower is better)
Translates to: SKPSTSSSSVSSVSA*SGWRSVAELISLSD
Trigger: ATCTGATAGGGATATTAGTTCAGCTACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGATACAGAAGAAGAACTAGTAGATGGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKVFLFP*GGENVE
Trigger: TTCAACATTCTCACCACCCAATGGGAACAGAAATAC...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAAACTCCTTTAAGCTTGTaGCCATGGTATTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKTPLSL*PWYFCS
Trigger: GGAACAGAAATACCATGGCAACAAGCTTAAAGGAGT...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp CTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAATTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATC +
Preference number: 5 (lower is better)
Translates to: LRESQQLKNRCPRERHLELLVSD*LKALSI
Trigger: GATACTCAATGCCTTCAGCAAATCAGAGACTAGCAA...TTCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CCTCAGAGAAAGCCAACAGCTAAAGAACAGATGTCCACGAGAGAGACATCTAGAGACGAGATGATAGTTTaGACAACAACATCCTTTATC +
Preference number: 5 (lower is better)
Translates to: PQRKPTAKEQMSTRETSRDEMIV*TTTSFI
Trigger: GATAAAGGATGTTGTTGTCAAAACTATCATCTCGTC...TCTAGATGTCTCTCTCGTGGACATCTGTTCTTTAGCTGTTGGCTTTCTCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp CAAACCACACATGGCTCACTTAAGGTAGAAACCAAAACCTGCTTTATAAGGCTGACTCCTTTAAGCTTGTaGCCATGGTATTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: QTTHGSLKVETKTCFIRLTPLSL*PWYFCS
Trigger: GGAACAGAAATACCATGGCAACAAGCTTAAAGGAGT...CAGCCTTATAAAGCAGGTTTTGGTTTCTACCTTAAGTGAGCCATGTGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCATCCCTCCGGCCCTACAAATACCCATCTCTATAATGCAACCACTTCAAAAATCTACTCCTTTAAGCTaGTTGCCATGGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: TIPPALQIPISIMQPLQKSTPLS*LPWYFC
Trigger: ACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGA...TTTTTGAAGTGGTTGCATTATAGAGATGGGTATTTGTAGGGCCGGAGGGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS-3UTR CAA 90 bp TGCTTGCTGCACAGCAGAACATTGAGAAACCATGTTTGTTGCACTATAGAGAAAGTATGTTTTCTCCTCTaGAGCTACAACTCAGCAACC +
Preference number: 5 (lower is better)
Translates to: CLLHSRTLRNHVCCTIEKVCFLL*SYNSAT
Trigger: GGTTGCTGAGTTGTAGCTCAAGAGGAGAAAACATAC...TTTCTCTATAGTGCAACAAACATGGTTTCTCAATGTTCTGCTGTGCAGCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258398.8
ENST00000392102.6
CDS-3UTR CAA 90 bp ACCTCAGAAGACCCCCTCAAATTCAGAACAAAGGATTTCCGGTCCAAATATGTTAAAATATCAGTGAGCTaGAAGACAGTCTATCTAGGG +
Preference number: 5 (lower is better)
Translates to: TSEDPLKFRTKDFRSKYVKISVS*KTVYLG
Trigger: CCCTAGATAGACTGTCTTCAAGCTCACTGATATTTT...AACATATTTGGACCGGAAATCCTTTGTTCTGAATTTGAGGGGGTCTTCTGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392102.6
CDS TCA 72 bp CCTCAGGCGCCCCTAGCAACCACGCACCGCCACGCGTaGCAAGCGCACTCGGCCGCCAGCGCCGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: PQAPLATTHRHA*QAHSAASAAAA
Trigger: GGCGGCAGCGGCGCTGGCGGCCGAGTGCGCTTGTCACGCGTGGCGGTGCGTGGTTGCTAGGGGCGCCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392102.6
ENST00000415717.5
ENST00000457313.5
CDS GCA 72 bp CTCGGCACCGGCTCCACGCTACTTCCTCCCTCGGCCTaGTGGGCTACCCGGCAGCCTCAGGCGCCCCTAGCA +
Preference number: 6 (lower is better)
Translates to: LGTGSTLLPPSA*WATRQPQAPLA
Trigger: TGCTAGGGGCGCCTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAAGTAGCGTGGAGCCGGTGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392102.6
ENST00000415717.5
ENST00000437755.1
CDS CCA 72 bp GGCAAAAGAAATATGCTGGTTCCTCCCTCGGCCTGCTaGGCTACCCGGCAGCCTCAGGCGCCCCTAGCAACC +
Preference number: 6 (lower is better)
Translates to: GKRNMLVPPSAC*ATRQPQAPLAT
Trigger: GGTTGCTAGGGGCGCCTGAGGCTGCCGGGTAGCCCAGCAGGCCGAGGGAGGAACCAGCATATTTCTTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457313.5
CDS CAA 90 bp GGTGGCTTCACAATCCACTTTTGGCGGCTGCTGCTCTCCCACGCTTaGCGCAGGAGCTTGGCGTCCTGGGGCAGGATAAAGGACTGGGGG +
Preference number: 6 (lower is better)
Translates to: GGFTIHFWRLLLSHA*RRSLASWGRIKDWG
Trigger: CCCCCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS CAA 90 bp ACTGGCTTCACAATCCACTTTTGGCGGCTGCTGCTCTCCCACGCTTaGCGCAGGAGCTTGGCGTCCTGGGGCAGGATAAAGGACTGGGGG +
Preference number: 6 (lower is better)
Translates to: TGFTIHFWRLLLSHA*RRSLASWGRIKDWG
Trigger: CCCCCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417196.5
ENST00000434241.1
CDS TCA 72 bp GGCCCACATCATGGCCACACGGTCTCATGGCCTTGCTaGGGTAAGGTGCCACACACCTCCGGTAGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GPHHGHTVSWPC*GKVPHTSGSSS
Trigger: GCTGCTACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGACCGTGTGGCCATGATGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS GCA 72 bp TTGGCTTCACTTGCTGATGGGCCTGAGGCCAGACTCTaGCCTCCGAGGGTTTCTCAGGTGGCGTGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LASLADGPEARL*PPRVSQVAWQV
Trigger: TACCTGCCACGCCACCTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGGCCCATCAGCAAGTGAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS TCA 72 bp ACAGGCTGCGGTGCACAGTCTCCAGTACCCCCTGAATaGTGCCAGGAGACAGGCTGGATCTTGGGTGGCGAT +
Preference number: 6 (lower is better)
Translates to: TGCGAQSPVPPE*CQETGWILGGD
Trigger: ATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGACTGTGCACCGCAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp GTCAACAGGCTGCGGTGCACAGTCTCCAGTACCCCCTaGATGATGCCAGGAGACAGGCTGGATCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: VNRLRCTVSSTP*MMPGDRLDLGW
Trigger: CCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTACTGGAGACTGTGCACCGCAGCCTGTTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp ACCCCAAGGTATCTGAGGCACCAGGGAGGACCCGCCTaGCCGATCCAGCATCCTCCTGAGGAAACTGCTGAT +
Preference number: 6 (lower is better)
Translates to: TPRYLRHQGGPA*PIQHPPEETAD
Trigger: ATCAGCAGTTTCCTCAGGAGGATGCTGGATCGGTCAGGCGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp ATGCTGGTGGCTTCACAATCCACTTTTGGCGGCTGCTaGTCTCCCACGCTTTGCGCAGGAGCTTGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: MLVASQSTFGGC*SPTLCAGAWRP
Trigger: AGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS GCA 72 bp CTGATGCTGGTGGCTTCACAATCCACTTTTGGCGGCTaGTGCTCTCCCACGCTTTGCGCAGGAGCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: LMLVASQSTFGG*CSPTLCAGAWR
Trigger: ACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACCAGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS CCA 72 bp GGAGGGAGGGGCCTGAGAAGGAGCTGTCCTCCACACTaGCAGCACTCACCACTGGAGCAGAATCAGAGACAA +
Preference number: 6 (lower is better)
Translates to: GGRGLRRSCPPH*QHSPLEQNQRQ
Trigger: TTGTCTCTGATTCTGCTCCAGTGGTGAGTGCTGCCAGTGTGGAGGACAGCTCCTTCTCAGGCCCCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CAA 90 bp CCAGCCAGTCATCGTTTCCTATGGGAGGTACATCAGGAATCAGCCTaGCTAACAGCTCAGTCCAGGGACAGAGAGAGGCCCAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PASHRFLWEVHQESA*LTAQSRDRERPRGP
Trigger: GGGGCCTCTGGGCCTCTCTCTGTCCCTGGACTGAGCTGTTAGCAAGGCTGATTCCTGATGTACCTCCCATAGGAAACGATGACTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467841.5
CDS TCA 72 bp GGTACAGAAGACTGTATTGTCCAACCCCAAGGTATCTaGGGCACCAGGGAGGACCCGCCTGACCGATCCAGC +
Preference number: 6 (lower is better)
Translates to: GTEDCIVQPQGI*GTREDPPDRSS
Trigger: GCTGGATCGGTCAGGCGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTGGACAATACAGTCTTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp GAGAGGCGGGTGGCCACGTTGGCTATGCCAAGAGTTTaGGGAAAAGGGGGACCTGGAGCTTTGCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: ERRVATLAMPRV*GKGGPGALPSP
Trigger: TGGAGAAGGCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp ATGGCCACACGGTCTCATGGCCTTGCTGAGGTAAGGTaGCACACACCTCCGGTAGTAGCAGCTGCATCCTTG +
Preference number: 6 (lower is better)
Translates to: MATRSHGLAEVR*HTPPVVAAASL
Trigger: CAAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCTTACCTCAGCAAGGCCATGAGACCGTGTGGCCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS GCA 72 bp GCTGGATGGAAGAGAGGCGGGTGGCCACGTTGGCTATaGCAAGAGTTTGAGGAAAAGGGGGACCTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: AGWKRGGWPRWL*QEFEEKGDLEL
Trigger: AAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCACCCGCCTCTCTTCCATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp CTACATAAAGTGCTGGGGCAAAAGAAATATGCTGGCTaGGGTGGGACGCCCAAGAGGCCTGGGCCCAACCCT +
Preference number: 6 (lower is better)
Translates to: LHKVLGQKKYAG*GGTPKRPGPNP
Trigger: AGGGTTGGGCCCAGGCCTCTTGGGCGTCCCACCCCAGCCAGCATATTTCTTTTGCCCCAGCACTTTATGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS CCA 72 bp TACCCCCTGAATGATGCCAGGAGACAGGCTGGATCTTaGGTGGCGATACTGGCTTCAGGCCCTGTGTGGTCT +
Preference number: 6 (lower is better)
Translates to: YPLNDARRQAGS*VAILASGPVWS
Trigger: AGACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GGGCACTGGCATCAGCTGGGACAGTGCCAATGCTTTTaGGCACCTTATGGTCAACAGGCTGCGGTGCACAGT +
Preference number: 6 (lower is better)
Translates to: GHWHQLGQCQCF*APYGQQAAVHS
Trigger: ACTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp CGCAGGAGCTTGGCGTCCTGGGGCAGGATAAAGGACTaGGGGAAGAAACTGAACTCCTTCTTGCCAAAGCGG +
Preference number: 6 (lower is better)
Translates to: RRSLASWGRIKD*GKKLNSFLPKR
Trigger: CCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGTCCTTTATCCTGCCCCAGGACGCCAAGCTCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000434241.1
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS CAA 72 bp TGGGCACTGGCATCAGCTGGGACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACAGGCTGCGGTGCACAG +
Preference number: 6 (lower is better)
Translates to: WALASAGTVPML*GTLWSTGCGAQ
Trigger: CTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CAA 72 bp AGGTGCCACACACCTCCGGTAGTAGCAGCTGCATCCTaGAAGTCTGTCAGTCTAGGGGATCCAGCTTCGCCC +
Preference number: 6 (lower is better)
Translates to: RCHTPPVVAAAS*KSVSLGDPASP
Trigger: GGGCGAAGCTGGATCCCCTAGACTGACAGACTTCAAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437755.1
CDS CAA 90 bp CCTCTAGGCCTTCACTGGACTGGGACACTCTGCCCTCAGTACCATTaGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGGTACTCG +
Preference number: 6 (lower is better)
Translates to: PLGLHWTGTLCPQYH*WPWQAISSALAWYS
Trigger: CGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS GCA 72 bp GGTGGCGTGGCAGGTACTGTGCCTGAGGGACCACTCTaGTTGAAGCTGTTTTTCTGGCGGAGGCCAATACTA +
Preference number: 6 (lower is better)
Translates to: GGVAGTVPEGPL*LKLFFWRRPIL
Trigger: TAGTATTGGCCTCCGCCAGAAAAACAGCTTCAAGCAGAGTGGTCCCTCAGGCACAGTACCTGCCACGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS GCA 72 bp CGATATGGGCACTGGCATCAGCTGGGACAGTGCCAATaGTTTTGGGCACCTTATGGTCAACAGGCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: RYGHWHQLGQCQ*FWAPYGQQAAV
Trigger: CACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp ATGGTTCTGTGGATGAGGAGGCCATGGGCTGGGCCATaGAGAAGACCATGGAAGAAGTGGCCTTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: MVLWMRRPWAGP*RRPWKKWPCWQ
Trigger: CTGCCAACAAGGCCACTTCTTCCATGGTCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCACAGAACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp TCAGCTGGGACAGTGCCAATGCTTTTGGGCACCTTATaGTCAACAGGCTGCGGTGCACAGTCTCCAGTACCC +
Preference number: 6 (lower is better)
Translates to: SAGTVPMLLGTL*STGCGAQSPVP
Trigger: GGGTACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GATGTGTCGTGGGAGCTAGCGGTAGACAAGGCGATATaGGCACTGGCATCAGCTGGGACAGTGCCAATGCTT +
Preference number: 6 (lower is better)
Translates to: DVSWELAVDKAI*ALASAGTVPML
Trigger: AAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTACCGCTAGCTCCCACGACACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp CACTGGACTGGGACACTCTGCCCTCAGTACCATTTGTaGCCCTGGCAAGCCATTTCATCTGCATTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HWTGTLCPQYHL*PWQAISSALAW
Trigger: CCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 72 bp CCCAGAACCCTGTATTCCTCTAGGCCTTCACTGGACTaGGACACTCTGCCCTCAGTACCATTTGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PRTLYSSRPSLD*DTLPSVPFVAL
Trigger: CAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAGGCCTAGAGGAATACAGGGTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CAA 90 bp AAGGCGATATGGGCACTGGCATCAGCTGGGACAGTGCCAATGCTTTaGGGCACCTTATGGTCAACAGGCTGCGGTGCACAGTCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: KAIWALASAGTVPML*GTLWSTGCGAQSPV
Trigger: TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp GCCTATAGCTGGAGCGGCGGTATAGCAGGGTGCTGTTaGACAAGTCCGGGAGAGAGTGTAGGTAACAGGAAC +
Preference number: 6 (lower is better)
Translates to: AYSWSGGIAGCC*TSPGESVGNRN
Trigger: GTTCCTGTTACCTACACTCTCTCCCGGACTTGTTCAACAGCACCCTGCTATACCGCCGCTCCAGCTATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000437755.1
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp TTGGGTGGCGATACTGGCTTCAGGCCCTGTGTGGTCTaGAATAAAGGCACTGGCGTGCTATTTGGCCACATG +
Preference number: 6 (lower is better)
Translates to: LGGDTGFRPCVV*NKGTGVLFGHM
Trigger: CATGTGGCCAAATAGCACGCCAGTGCCTTTATTGCAGACCACACAGGGCCTGAAGCCAGTATCGCCACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp CTGGCAGCCTTGCCTCGGCATCTTCTCAAAGCCTCTTaGGGTCAATTTCCTCACGGCCTCAGTGAACCGAAT +
Preference number: 6 (lower is better)
Translates to: LAALPRHLLKAS*GQFPHGLSEPN
Trigger: ATTCGGTTCACTGAGGCCGTGAGGAAATTGACCGCAAGAGGCTTTGAGAAGATGCCGAGGCAAGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp GGGAAGAAACTGAACTCCTTCTTGCCAAAGCGGCTCTaGATACGTGACAGGTTCCGCCATAGCCGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GKKLNSFLPKRL*IRDRFRHSRSF
Trigger: GAAGGACCGGCTATGGCGGAACCTGTCACGTATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000434241.1
ENST00000448224.1
ENST00000457313.5
ENST00000465558.5
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
ENST00000491899.1
ENST00000494428.5
CDS GCA 72 bp ACTGGGCAGAGCTCCCAGACTTGGTTTTCAAAGAGTTaGTATGGAGCTGTCCTACATGAGGCCCTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: TGQSSQTWFSKS*YGAVLHEALGP
Trigger: TGGCCCCAGGGCCTCATGTAGGACAGCTCCATAGCAACTCTTTGAAAACCAAGTCTGGGAGCTCTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467841.5
CDS CCA 72 bp AGCGGTAGACAAGGCGATATGGGCACTGGCATCAGCTaGGACAGTGCCAATGCTTTTGGGCACCTTATGGTC +
Preference number: 6 (lower is better)
Translates to: SGRQGDMGTGIS*DSANAFGHLMV
Trigger: GACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGATGCCAGTGCCCATATCGCCTTGTCTACCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GGTGACCCCAGCAGCCCAGCCAGTCATCGTTTCCTATaGGAGGTACATCAGGAATCAGCCTTGCTAACAGCT +
Preference number: 6 (lower is better)
Translates to: GDPSSPASHRFL*EVHQESALLTA
Trigger: AGCTGTTAGCAAGGCTGATTCCTGATGTACCTCCCATAGGAAACGATGACTGGCTGGGCTGCTGGGGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467841.5
ENST00000480472.5
CDS CCA 72 bp ACTGGGACACTCTGCCCTCAGTACCATTTGTGGCCCTaGCAAGCCATTTCATCTGCATTGGCCTGGTACTCG +
Preference number: 6 (lower is better)
Translates to: TGTLCPQYHLWP*QAISSALAWYS
Trigger: CGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CAA 72 bp CACTTGCTTCTTTTCCAGCTTCCAGATTGGCTTCACTaGCTGATGGGCCTGAGGCCAGACTCTGCCCTCCGA +
Preference number: 6 (lower is better)
Translates to: HLLLFQLPDWLH*LMGLRPDSALR
Trigger: TCGGAGGGCAGAGTCTGGCCTCAGGCCCATCAGCAAGTGAAGCCAATCTGGAAGCTGGAAAAGAAGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000415717.5
ENST00000424644.1
ENST00000437755.1
ENST00000442769.5
CDS CAA 72 bp GGAACTGGGTTTCTGGGGATAAGGGGAAAGGCCAGCTaGAGTCTTCTTGGATTTGGGCGTGGTCCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: GTGFLGIRGKAS*SLLGFGRGPVF
Trigger: GAAGACGGGACCACGCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCCTTATCCCCAGAAACCCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000472527.1
CDS CAA 72 bp AGGTGCCACACACCTCCGGTAGTAGCAGCTGCATCCTaGAAGTCTGTCAGTCTGGGGCCAAGATGCCATCTA +
Preference number: 6 (lower is better)
Translates to: RCHTPPVVAAAS*KSVSLGPRCHL
Trigger: TAGATGGCATCTTGGCCCCAGACTGACAGACTTCAAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415717.5
CDS CAA 72 bp TTCATGGAAGGCGAATACTGGCTTCACAATCCACTTTaGGCGGCTGCTGCTCTCCCACGCTTTGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FMEGEYWLHNPL*AAAALPRFAQE
Trigger: CTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCAGTATTCGCCTTCCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434241.1
CDS CAA 72 bp GCCCAGAGGCCCCAGAACTGGGCAGAGCTCCCAGACTaGGTTTTCAAAGAGTTGCTATGGAGCTGTCCTACA +
Preference number: 6 (lower is better)
Translates to: AQRPQNWAELPD*VFKELLWSCPT
Trigger: TGTAGGACAGCTCCATAGCAACTCTTTGAAAACCAAGTCTGGGAGCTCTGCCCAGTTCTGGGGCCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467841.5
CDS CAA 72 bp CTTCACTGGACTGGGACACTCTGCCCTCAGTACCATTaGTGGCCCTGGCAAGCCATTTCATCTGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: LHWTGTLCPQYH*WPWQAISSALA
Trigger: GGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGAGGGCAGAGTGTCCCAGTCCAGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS TCA 72 bp GAGAGTGTAGGTAACAGGAACTGCTGTGGCCTGCAATaGCAGCCGTGGTCCCAGAGCTACATAAAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: ESVGNRNCCGLQ*QPWSQSYIKCW
Trigger: CCAGCACTTTATGTAGCTCTGGGACCACGGCTGTCATTGCAGGCCACAGCAGTTCCTGTTACCTACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000437755.1
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GGTTTCCACCGCCTGCTCCTGTTGAGGACATTCCACTaGAAGCTGGGGTTCAGGAAACTAGACTGTTCAAGC +
Preference number: 6 (lower is better)
Translates to: GFHRLLLLRTFH*KLGFRKLDCSS
Trigger: GCTTGAACAGTCTAGTTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCAACAGGAGCAGGCGGTGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GAAGTCTGCCCAGAGCACTTGATCACAGGTAACGTCTaGGTAGAAAGGCTGGGCTCTTTGCTGGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: EVCPEHLITGNV*VERLGSLLVSS
Trigger: TGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000442769.5
ENST00000457313.5
ENST00000472527.1
CDS CCA 72 bp GGCCAGCTTCTCATACAGCCAGATGATGGGGCTCAGTaGGTAACCAAGCCACAGGAAAAGCCAGCTAACAGT +
Preference number: 6 (lower is better)
Translates to: GQLLIQPDDGAQ*VTKPQEKPANS
Trigger: ACTGTTAGCTGGCTTTTCCTGTGGCTTGGTTACCCACTGAGCCCCATCATCTGGCTGTATGAGAAGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475950.5
ENST00000480929.1
CDS CAA 72 bp GGGGTTCAGGAAACTAGACTGTTCAAGCTGGCAGCCTaGCCTCGGCATCTTCTCAAAGCCTCTTGCGGTCAA +
Preference number: 6 (lower is better)
Translates to: GVQETRLFKLAA*PRHLLKASCGQ
Trigger: TTGACCGCAAGAGGCTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAGTTTCCTGAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CAA 72 bp CATCGTTTCCTATGGGAGGTACATCAGGAATCAGCCTaGCTAACAGCTCAGTCCAGGGACAGAGAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: HRFLWEVHQESA*LTAQSRDRERP
Trigger: GGGCCTCTCTCTGTCCCTGGACTGAGCTGTTAGCAAGGCTGATTCCTGATGTACCTCCCATAGGAAACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467841.5
CDS CAA 90 bp GAGCACTTGATCACAGGTAACGTCTGGGTAGAAAGGCTGGGCTCTTaGCTGGTGTCCTCACTGTCCTTTGAGGAACTGGGTTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: EHLITGNVWVERLGS*LVSSLSFEELGFWG
Trigger: TCCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000472527.1
CDS CAA 90 bp GCTGAGGTAAGGTGCCACACACCTCCGGTAGTAGCAGCTGCATCCTaGAAGTCTGTCAGTCTGGGGCCAAGATGCCATCTAGTGTTGAAA +
Preference number: 6 (lower is better)
Translates to: AEVRCHTPPVVAAAS*KSVSLGPRCHLVLK
Trigger: TTTCAACACTAGATGGCATCTTGGCCCCAGACTGACAGACTTCAAGGATGCAGCTGCTACTACCGGAGGTGTGTGGCACCTTACCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415717.5
CDS CAA 90 bp GAGCACTTGATCACAGGTAACGTCTGGGTAGAAAGGCTGGGCTCTTaGCTGGTGTCCTCACTGTCCTTTGAGGAACTGGGTTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: EHLITGNVWVERLGS*LVSSLSFEELGFPA
Trigger: AGCTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS TCA 72 bp AAGGCTGGGCTCTTTGCTGGTGTCCTCACTGTCCTTTaGGGAACTGGGTTTCCCAGCTTGCTAGTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: KAGLFAGVLTVL*GTGFPSLLVSD
Trigger: ATCAGAGACTAGCAAGCTGGGAAACCCAGTTCCTCAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS TCA 72 bp TCTCGAATGGATCGGAAACTAGGAGACTTCATGTGGTaGCCCCAGCAGCCCAGCCAGTCATCGTTTCCTATG +
Preference number: 6 (lower is better)
Translates to: SRMDRKLGDFMW*PQQPSQSSFPM
Trigger: CATAGGAAACGATGACTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCCTAGTTTCCGATCCATTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467841.5
ENST00000475950.5
ENST00000480472.5
ENST00000480929.1
CDS TCA 72 bp AACTCCAAGATACTGCAGCTGAACTGGAGATGTACGTaGTCCACTGGAGTCTCTCACTGTACCCCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: NSKILQLNWRCT*STGVSHCTPVL
Trigger: CAGGACGGGGGTACAGTGAGAGACTCCAGTGGATCACGTACATCTCCAGTTCAGCTGCAGTATCTTGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 72 bp TGGAAGCTGGGGTTCAGGAAACTAGACTGTTCAAGCTaGCAGCCTTGCCTCGGCATCTTCTCAAAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: WKLGFRKLDCSS*QPCLGIFSKPL
Trigger: AAGAGGCTTTGAGAAGATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAGTTTCCTGAACCCCAGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp TCTGGGGATAAGGGGAAAGGCCAGCTTGAGTCTTCTTaGATTTGGGCGTGGTCCCGTCTTCAGAGAGTAGTA +
Preference number: 6 (lower is better)
Translates to: SGDKGKGQLESS*IWAWSRLQRVV
Trigger: TACTACTCTCTGAAGACGGGACCACGCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCCCTTATCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000472527.1
CDS CAA 72 bp TTGAAGTGGGACCGTCCAATGGTCTGCTTGACAATGTaGGGGGTCACTGTGCTCATCTTCCATCGGAGCAAC +
Preference number: 6 (lower is better)
Translates to: LKWDRPMVCLTM*GVTVLIFHRSN
Trigger: GTTGCTCCGATGGAAGATGAGCACAGTGACCCCCAACATTGTCAAGCAGACCATTGGACGGTCCCACTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
ENST00000461181.1
ENST00000494428.5
CDS CAA 72 bp GAGGAAGCAGAAAGTCTTGAAGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGGGTAGAAAGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: EEAESLEVCPEH*ITGNVWVERLG
Trigger: GCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000442769.5
ENST00000457313.5
ENST00000472527.1
CDS CAA 90 bp AGGACAAAACCTGCCAGATTCAGAAGGTCACGAATCATCTGGCCTTaGATGCTGATATCCAGTGGAGAGCTGGAGTGGAGGCTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: RTKPARFRRSRIIWP*MLISSGELEWRLGE
Trigger: TTCCCCAAGCCTCCACTCCAGCTCTCCACTGGATATCAGCATCAAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCAGGTTTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS CAA 90 bp TGGAAAGTGGAGGAAGCAGAAAGTCTTGAAGTCTGCCCAGAGCACTaGATCACAGGTAACGTCTGGGTAGAAAGGCTGGGCTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: WKVEEAESLEVCPEH*ITGNVWVERLGSLL
Trigger: CAGCAAAGAGCCCAGCCTTTCTACCCAGACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417855.1
ENST00000442769.5
ENST00000457313.5
ENST00000472527.1
CDS TCA 72 bp AGGAGTCAATTACAGATTCACAGGCAGGGTTGTGATTaGGCCCACTGGCATGTGAGGCAAGGAGGTGAATGC +
Preference number: 6 (lower is better)
Translates to: RSQLQIHRQGCD*AHWHVRQGGEC
Trigger: GCATTCACCTCCTTGCCTCACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGAATCTGTAATTGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp CAGTGCCTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGT +
Preference number: 6 (lower is better)
Translates to: QCLATGKADQSI*KEVNPQRIVGS
Trigger: ACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448224.1
CDS TCA 72 bp CAGGGAAACAGCTCCTCAGAAAGGACCCCTACCTTCTaGTGCTCTCGAATGGATCGGAAACTAGGAGACTTC +
Preference number: 6 (lower is better)
Translates to: QGNSSSERTPTF*CSRMDRKLGDF
Trigger: GAAGTCTCCTAGTTTCCGATCCATTCGAGAGCATCAGAAGGTAGGGGTCCTTTCTGAGGAGCTGTTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461181.1
ENST00000480929.1
CDS TCA 72 bp AGAATGGTGAGACAGAAGCAGAGCCTAGCGGAGAAGTaGGAGAGGCCTATACATACCAACCCAACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RMVRQKQSLAEK*ERPIHTNPTPA
Trigger: AGCAGGAGTTGGGTTGGTATGTATAGGCCTCTCTCACTTCTCCGCTAGGCTCTGCTTCTGTCTCACCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CCA 72 bp TTTCCTCACGGCCTCAGTGAACCGAATCTCCTTAGTTaGATCCTGGGAATCAGAGCTGTCATCCAGAGCACA +
Preference number: 6 (lower is better)
Translates to: FPHGLSEPNLLS*ILGIRAVIQST
Trigger: TGTGCTCTGGATGACAGCTCTGATTCCCAGGATCCAACTAAGGAGATTCGGTTCACTGAGGCCGTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp GATACTGCAGCTGAACTGGAGATGTACGTGATCCACTaGAGTCTCTCACTGTACCCCCGTCCTGTACTTTCT +
Preference number: 6 (lower is better)
Translates to: DTAAELEMYVIH*SLSLYPRPVLS
Trigger: AGAAAGTACAGGACGGGGGTACAGTGAGAGACTCCAGTGGATCACGTACATCTCCAGTTCAGCTGCAGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 72 bp CGGTCCTTCCTCCCAATCTGGAATGAGCCTGGGAAATaGTTTAGCTACAAAAGGGAAAAGGGTGAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RSFLPIWNEPGK*FSYKREKGECR
Trigger: CCTGCACTCACCCTTTTCCCTTTTGTAGCTAAACCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480929.1
ENST00000491899.1
CDS CAA 72 bp TCTGAGGGCAGGGAGGGCACATCACCTTTAAGCTTGTaGCCATGGTATTTCTGTTCCCATTGGGTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SEGREGTSPLSL*PWYFCSHWVVR
Trigger: TCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGTGATGTGCCCTCCCTGCCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CAA 72 bp CTTTCTGAGGGCAGGGAGGGCACATCACCTTTAAGCTaGTTGCCATGGTATTTCTGTTCCCATTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LSEGREGTSPLS*LPWYFCSHWVV
Trigger: CACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGTGATGTGCCCTCCCTGCCCTCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CAA 90 bp TTGCTGATTTTGAAGTGGGACCGTCCAATGGTCTGCTTGACAATGTaGGGGGTCACTGTGCTCATCTTCCATCGGAGCAACTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLILKWDRPMVCLTM*GVTVLIFHRSNFLC
Trigger: ACAGAGGAAGTTGCTCCGATGGAAGATGAGCACAGTGACCCCCAACATTGTCAAGCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
ENST00000461181.1
ENST00000494428.5
CDS TCA 72 bp AAAAGGGGGACCTGGAGCTTTGCCTTCTCCAAATGCTaGGGAGTCAATTACAGATTCACAGGCAGGGTTGTG +
Preference number: 6 (lower is better)
Translates to: KRGTWSFAFSKC*GVNYRFTGRVV
Trigger: CACAACCCTGCCTGTGAATCTGTAATTGACTCCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp CCCCTACATAGGCAAGAAACTCCAAGATACTGCAGCTaGACTGGAGATGTACGTGATCCACTGGAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: PLHRQETPRYCS*TGDVRDPLESL
Trigger: GAGAGACTCCAGTGGATCACGTACATCTCCAGTTCAGCTGCAGTATCTTGGAGTTTCTTGCCTATGTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS TCA 72 bp TACATAGGACAAAGGCCAGCTTCTCATACAGCCAGATaGTGGGGCTCAGTGGGTAACCAAGCCACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: YIGQRPASHTAR*WGSVGNQATGK
Trigger: TTTTCCTGTGGCTTGGTTACCCACTGAGCCCCATCATCTGGCTGTATGAGAAGCTGGCCTTTGTCCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS GCA 72 bp CTAAACTCATCTCCTTTATCCCACCTCAGTCCCGCATaGAGGAAGACCCTCCCCAGATTTAACGAAGTAGAG +
Preference number: 6 (lower is better)
Translates to: LNSSPLSHLSPA*RKTLPRFNEVE
Trigger: CTCTACTTCGTTAAATCTGGGGAGGGTCTTCCTGCATGCGGGACTGAGGTGGGATAAAGGAGATGAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 72 bp TGTCATCCAGAGCACAGGAAAGTGGCTCTGCCCTCATaGCTAAGTTATTCCGGTTATACCAGGAAGAGGCAA +
Preference number: 6 (lower is better)
Translates to: CHPEHRKVALPS*LSYSGYTRKRQ
Trigger: TTGCCTCTTCCTGGTATAACCGGAATAACTTAGCCATGAGGGCAGAGCCACTTTCCTGTGCTCTGGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp AGGGGGAACGTTGGGAAAGAGACTGTAGATGAGGGCTaGTCGGACAACTTTCTCATGATTGGAAAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: RGNVGKETVDEG*SDNFLMIGKGF
Trigger: AAACCCCTTTCCAATCATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTCCCAACGTTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp CCCAGCCAGTCATCGTTTCTTTTGCTGATTTTGAAGTaGGACCGTCCAATGGTCTGCTTGACAATGTTGGGG +
Preference number: 6 (lower is better)
Translates to: PSQSSFLLLILK*DRPMVCLTMLG
Trigger: CCCCAACATTGTCAAGCAGACCATTGGACGGTCCCACTTCAAAATCAGCAAAAGAAACGATGACTGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
ENST00000461181.1
ENST00000494428.5
CDS CCA 72 bp GGCAGGGAGGGCACATCACCTTTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGGGTGGTGAGAATGTTG +
Preference number: 6 (lower is better)
Translates to: GREGTSPLSLLP*YFCSHWVVRML
Trigger: CAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGTGATGTGCCCTCCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CAA 72 bp GGCTCTTCATGGAAGGCGAATACCACTGTCACATACTaGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: GSSWKANTTVTY*QLAKRTSPSEK
Trigger: CTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTATTCGCCTTCCATGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS TCA 72 bp GGGTCAGATAATAGGCTTTCTTCATCTTCTGTGCAGTaGCATGCTCTGGAGCCATTCGACATTTGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GSDNRLSSSSVQ*HALEPFDICPQ
Trigger: CTGGGGACAAATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAAGCCTATTATCTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS TCA 72 bp CACATACTTGCAACTGGCAAAGCGGACCAGTCCATCTaGAAAGAGGTAAATCCGCAGAGGATCGTAGGAAGT +
Preference number: 6 (lower is better)
Translates to: HILATGKADQSI*KEVNPQRIVGS
Trigger: ACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465558.5
ENST00000480929.1
CDS CCA 72 bp ACAAAACCTGCCAGATTCAGAAGGTCACGAATCATCTaGCCTTTGATGCTGATATCCAGTGGAGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TKPARFRRSRII*PLMLISSGELE
Trigger: CTCCAGCTCTCCACTGGATATCAGCATCAAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCAGGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS CAA 72 bp TTGCTGATTTTGAAGTGGGACCGTCCAATGGTCTGCTaGACAATGTTGGGGGTCACTGTGCTCATCTTCCAT +
Preference number: 6 (lower is better)
Translates to: LLILKWDRPMVC*TMLGVTVLIFH
Trigger: ATGGAAGATGAGCACAGTGACCCCCAACATTGTCAAGCAGACCATTGGACGGTCCCACTTCAAAATCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000417196.5
ENST00000442769.5
ENST00000457313.5
ENST00000461181.1
ENST00000494428.5
CDS CAA 90 bp GGAACTGGGTTTCCCAGCTTGCTAGTCTCTGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTTGAGATAGTCAGAAGTGATGTCGGG +
Preference number: 6 (lower is better)
Translates to: GTGFPSLLVSDLLKA*SITSSFEIVRSDVG
Trigger: CCCGACATCACTTCTGACTATCTCAAAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAACCCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS CAA 90 bp ACTTGGCTTTCTGAGGGCAGGGAGGGCACATCACCTTTAAGCTTGTaGCCATGGTATTTCTGTTCCCATTGGGTGGTGAGAATGTTGAAA +
Preference number: 6 (lower is better)
Translates to: TWLSEGREGTSPLSL*PWYFCSHWVVRMLK
Trigger: TTTCAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGTGATGTGCCCTCCCTGCCCTCAGAAAGCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CAA 90 bp AGGAAAAGCCAGCTAACAGTCCCCAAGATAAAGACCTTAGAACAGTaGGCTAAGGAAGCTCTTTGGCTGGGAGAACAAAGGGCAGAACAT +
Preference number: 6 (lower is better)
Translates to: RKSQLTVPKIKTLEQ*AKEALWLGEQRAEH
Trigger: ATGTTCTGCCCTTTGTTCTCCCAGCCAAAGAGCTTCCTTAGCCAACTGTTCTAAGGTCTTTATCTTGGGGACTGTTAGCTGGCTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475950.5
ENST00000480929.1
CDS TCA 72 bp CCTTTGAGGAACTGGGTTTCCCAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAGTATCACGTCATCCTT +
Preference number: 6 (lower is better)
Translates to: PLRNWVSQLASL*FAEGIEYHVIL
Trigger: AAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAACCCAGTTCCTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417855.1
ENST00000457313.5
CDS TCA 72 bp GGAAAAGCAACAAGGTTGAAGAGCATGAACTCAGCATaGCATGGCAAGGCTGAAAAGGGTCAGCTAAAGGAC +
Preference number: 6 (lower is better)
Translates to: GKATRLKSMNSA*HGKAEKGQLKD
Trigger: GTCCTTTAGCTGACCCTTTTCAGCCTTGCCATGTCATGCTGAGTTCATGCTCTTCAACCTTGTTGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461181.1
CDS GCA 72 bp TGCCAAGAGTTTGAGGAAAAGGGGGACCTGGAGCTTTaGCTTCTCCAAATGCTGAGGAGTCAATTACAGATT +
Preference number: 6 (lower is better)
Translates to: CQEFEEKGDLEL*LLQMLRSQLQI
Trigger: AATCTGTAATTGACTCCTCAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp GGAAATGATATCCTCTGCATTGGGCAGGACAAAACCTaGCAGATTCAGAAGGTCACGAATCATCTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: GNDILCIGQDKT*QIQKVTNHLAF
Trigger: AAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS GCA 72 bp TCAGTACCATTTGTGGCCCTGGCAAGCCATTTCATCTaGATTGGCCTGGTACTCGGCATTCTTTTTATTGAC +
Preference number: 6 (lower is better)
Translates to: SVPFVALASHFI*IGLVLGILFID
Trigger: GTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CCA 72 bp CTCCGGAGCAGATCTACTCCTTTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGGGTGGTGAGAATGTTG +
Preference number: 6 (lower is better)
Translates to: LRSRSTPLSLLP*YFCSHWVVRML
Trigger: CAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGATCTGCTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CCA 72 bp CACCAACTCCGGAGCAGATCTTTAAGCTTGTTGCCATaGTATTTCTGTTCCCATTGGGTGGTGAGAATGTTG +
Preference number: 6 (lower is better)
Translates to: HQLRSRSLSLLP*YFCSHWVVRML
Trigger: CAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGATCTGCTCCGGAGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417855.1
CDS CCA 72 bp TCAGAGGATACCTCACCACTGTCACATACTTGCAACTaGCAAAGCGGACCAGTCCATCTGAAAAGAGGTAAA +
Preference number: 6 (lower is better)
Translates to: SEDTSPLSHTCN*QSGPVHLKRGK
Trigger: TTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTGAGGTATCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CAA 72 bp CAGCTAACAGTCCCCAAGATAAAGACCTTAGAACAGTaGGCTAAGGAAGCTCTTTGGCTGGGAGAACAAAGG +
Preference number: 6 (lower is better)
Translates to: QLTVPKIKTLEQ*AKEALWLGEQR
Trigger: CCTTTGTTCTCCCAGCCAAAGAGCTTCCTTAGCCAACTGTTCTAAGGTCTTTATCTTGGGGACTGTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475950.5
ENST00000480929.1
CDS CAA 72 bp TACCATTTGTGGCCCTGGCAAGCCATTTCATCTGCATaGGCCTGGTACTCGGCATTCTTTTTATTGACACTG +
Preference number: 6 (lower is better)
Translates to: YHLWPWQAISSA*AWYSAFFLLTL
Trigger: CAGTGTCAATAAAAAGAATGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CAA 90 bp GAGCTTTGTTTTCCCAGCTTGCTAGTCTCTGATTTGCTGAAGGCATaGAGTATCACGTCATCCTTTGAGATAGTCAGAAGTGATGTCGGG +
Preference number: 6 (lower is better)
Translates to: ELCFPSLLVSDLLKA*SITSSFEIVRSDVG
Trigger: CCCGACATCACTTCTGACTATCTCAAAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000472527.1
CDS TCA 72 bp CTCACAGGAGCTTTGTTTTCCCAGCTTGCTAGTCTCTaGTTTGCTGAAGGCATTGAGTATCACGTCATCCTT +
Preference number: 6 (lower is better)
Translates to: LTGALFSQLASL*FAEGIEYHVIL
Trigger: AAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAGCTCCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000472527.1
CDS GCA 72 bp ATATTGTCAGAGGATACCTCACCACTGTCACATACTTaGAACTGGCAAAGCGGACCAGTCCATCTGAAAAGA +
Preference number: 6 (lower is better)
Translates to: ILSEDTSPLSHT*NWQSGPVHLKR
Trigger: TCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTGAGGTATCCTCTGACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS CAA 72 bp CAGGAGCTTTGTTTTCCCAGCTTGCTAGTCTCTGATTaGCTGAAGGCATTGAGTATCACGTCATCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: QELCFPSLLVSD*LKALSITSSFE
Trigger: CTCAAAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAGCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000472527.1
CDS CAA 72 bp AATATTGTCAGAGGATACCTCACCACTGTCACATACTaGCAACTGGCAAAGCGGACCAGTCCATCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: NIVRGYLTTVTY*QLAKRTSPSEK
Trigger: CTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGTATGTGACAGTGGTGAGGTATCCTCTGACAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480929.1
CDS TCA 72 bp TCTGCAATAAAGGCACTGGCGTGCTATTTGGCCACATaGAGGAATTATTATTCAGCATGGGCTTATAGGAGG +
Preference number: 6 (lower is better)
Translates to: SAIKALACYLAT*RNYYSAWAYRR
Trigger: CCTCCTATAAGCCCATGCTGAATAATAATTCCTTCATGTGGCCAAATAGCACGCCAGTGCCTTTATTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS TCA 72 bp TCTACTAGTTCTTCTTCTGTATCTTCAGTCTCAGCCTaGTCTGGCTGGAGGTCAGTAGCTGAACTAATATCC +
Preference number: 6 (lower is better)
Translates to: STSSSSVSSVSA*SGWRSVAELIS
Trigger: GGATATTAGTTCAGCTACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGATACAGAAGAAGAACTAGTAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS GCA 72 bp TTTCTGGGTCAGATAATAGGCTTTCTTCATCTTCTGTaGAGTGACATGCTCTGGAGCCATTCGACATTTGTC +
Preference number: 6 (lower is better)
Translates to: FLGQIIGFLHLL*SDMLWSHSTFV
Trigger: GACAAATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAAGATGAAGAAAGCCTATTATCTGACCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000436668.5
ENST00000442769.5
ENST00000457313.5
ENST00000465558.5
CDS CAA 72 bp TCCTTTAAGCTTGTTGCCATGGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAAATATCGTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SFKLVAMVFLFP*GGENVEISWLL
Trigger: GAGCAGCCACGATATTTCAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258398.8
ENST00000392102.6
ENST00000442769.5
ENST00000457313.5
CDS CAA 72 bp ACCTTTAAGCTTGTTGCCATGGTATTTCTGTTCCCATaGGGTGGTGAGAATGTTGAAATATCGTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: TFKLVAMVFLFP*GGENVEISWLL
Trigger: GAGCAGCCACGATATTTCAACATTCTCACCACCCAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465558.5
CDS CCA 72 bp AATCTAACTCAAGACACATTAGAGGAAAAAGCATCTTaGAGAAGCTGCAACTGCAGGATTTCAGAGTTACAC +
Preference number: 6 (lower is better)
Translates to: NLTQDTLEEKAS*RSCNCRISELH
Trigger: GTGTAACTCTGAAATCCTGCAGTTGCAGCTTCTCCAAGATGCTTTTTCCTCTAATGTGTCTTGAGTTAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480929.1