Pregenerated sensors for TTF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000125482Ensembl transcript IDs: ENST00000334270.3, ENST00000461970.1, ENST00000612514.4
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCTCTCTCTCATGCGGTaGTGCGATCTTGGCTCACTG | + |
Preference number: 2 (lower is better) Translates to: LIGMAIYFNAPEERVELWLSLMR*CDLGSL Trigger: CAGTGAGCCAAGATCGCACCACCGCATGAGAGAGAG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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3UTR-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCTCTCTCTCATGCGGTaGTGCGATCTTGGCTCACTG | + |
Preference number: 2 (lower is better) Translates to: SRGKSRTLAIVHSLLNINLSLMR*CDLGSL Trigger: CAGTGAGCCAAGATCGCACCACCGCATGAGAGAGAG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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3UTR-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCACCCGGCTAATTTTTaGATTTTTAATAGTGACAGG | + |
Preference number: 2 (lower is better) Translates to: SRGKSRTLAIVHSLLNINHPANF*IFNSDR Trigger: CCTGTCACTATTAAAAATGCAAAAATTAGCCGGGTG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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3UTR-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCACCCGGCTAATTTTTaGATTTTTAATAGTGACAGG | + |
Preference number: 2 (lower is better) Translates to: LIGMAIYFNAPEERVELWHPANF*IFNSDR Trigger: CCTGTCACTATTAAAAATGCAAAAATTAGCCGGGTG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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3UTR-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTGCGGTGGTGCGATCTaGGCTCACTGCAACCTCCAC | + |
Preference number: 3 (lower is better) Translates to: SRGKSRTLAIVHSLLNINCGGAI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGCACCACCGCA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGAGGCAGGGTGTCCCTTaGCCGCTGGCTCTCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQRQGVP*PLALPG Trigger: TCCTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCT...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTACAGGCGTGAGCCATaGATGGCGCCTGGCCTTCGC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQYRREP*MAPGLR Trigger: GCGAAGGCCAGGCGCCATGCATGGCTCACGCCTGTA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCTCCTGGTGGGATTCTaGCTGAGGCAGGGTGTCCCT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLLVGF*LRQGVP Trigger: AGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCCCGGTACATCCGCTTaGTTGTGCTGGTGGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQPGTSA*LCWWPC Trigger: ACAGGGCCACCAGCACAATCAAGCGGATGTACCGGG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGGCGCCTCTTGCACGTaGTTGCTTGCCAAACAGGCC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQGASCT*LLAKQA Trigger: GGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGCAGGCCGGGATTCCTaGATATCAGCCCCAACCTCA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQAGRDS*ISAPTS Trigger: TGAGGTTGGGGCTGATATGCAGGAATCCCGGCCTGC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCCTGCAGTTTCACCATaGAGGCCCACAGCAGGCCGG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWPAVSP*RPTAGR Trigger: CCGGCCTGCTGTGGGCCTGCATGGTGAAACTGCAGG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCCCGCAGGGCATTCATaGCATAGTAGATACGCCGAC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQPAGHS*HSRYAD Trigger: GTCGGCGTATCTACTATGGCATGAATGCCCTGCGGG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTACAGGCGTGAGCCATaGATGGCGCCTGGCCTTCGC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWYRREP*MAPGLR Trigger: GCGAAGGCCAGGCGCCATGCATGGCTCACGCCTGTA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGTGTCCCTTGCCCGCTaGCTCTCCCAGGATGCAGCT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINVSLAR*LSQDAA Trigger: AGCTGCATCCTGGGAGAGCCAGCGGGCAAGGGACAC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCTCTCTCTCATGCGGTaGTGCGATCTTGGCTCACTG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLSLMR*CDLGSL Trigger: CAGTGAGCCAAGATCGCACCACCGCATGAGAGAGAG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTGGTGGGATTCTGACTaGGGCAGGGTGTCCCTTGCC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINWWDSD*GRVSLA Trigger: GGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCCCGGTACATCCGCTTaGTTGTGCTGGTGGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINPGTSA*LCWWPC Trigger: ACAGGGCCACCAGCACAATCAAGCGGATGTACCGGG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCAGTCCCGGCCTCTCTaGCTGCTTGCGATCCTTCAG | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINQSRPL*LLAILQ Trigger: CTGAAGGATCGCAAGCAGGCAGAGAGGCCGGGACTG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCTCTCATGCGGTGGTaGGATCTTGGCTCACTGCAA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSLMRW*DLGSLQ Trigger: TTGCAGTGAGCCAAGATCGCACCACCGCATGAGAGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGCCATGCATGGCGCCTaGCCTTCGCTTTCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQAMHGA*PSLSFS Trigger: AGAAAAAGAAAGCGAAGGCCAGGCGCCATGCATGGC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCCTCTTGCACGTGCTTaGTTGCCAAACAGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWPLARA*LPNRPG Trigger: CCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGTACAGCAGCTTGTCTaGACTCTCAATGCCTGTCAG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQVQQLV*TLNACQ Trigger: CTGACAGGCATTGAGAGTGCAGACAAGCTGCTGTAC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCGAAATGGGAAAACTTaGTTGGGTGCTGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQRNGKT*LGAAGV Trigger: GACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGATGGGAAAACTTGCTTaGGTGCTGCAGGAGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQMGKLA*VLQESG Trigger: TCCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCAT...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCCAGGGAGGAGTCTCTaGAAATTTCGTGGGAATGTT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQPGRSL*KFRGNV Trigger: AACATTCCCACGAAATTTTCAGAGACTCCTCCCTGG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGCCATCACCTTCTACTaGATCAAAGAGTGTGCTCTC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQAITFY*IKECAL Trigger: GAGAGCACACTCTTTGATTCAGTAGAAGGTGATGGC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGCACCACGATTTCTTTaGCTGCTGATCTGTGAGAAC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQAPRFL*LLICEN Trigger: GTTCTCACAGATCAGCAGTCAAAGAAATCGTGGTGC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCTTCTTCGACAGCCTTaGTTAGTTTCCGGGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLLRQP*LVSGFQ Trigger: CTGAAACCCGGAAACTAATCAAGGCTGTCGAAGAAG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTGTCTGCACTCTCAATaGCTGTCAGGGCTAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQCLHSQ*LSGLES Trigger: ACTTTCTAGCCCTGACAGGCATTGAGAGTGCAGACA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCCCGCAGGGCATTCATaGCATAGTAGATACGCCGAC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWPAGHS*HSRYAD Trigger: GTCGGCGTATCTACTATGGCATGAATGCCCTGCGGG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGTTCTTACTGGGCACTaGAAAATCATCACCAGACAC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQVLTGH*KIITRH Trigger: GTGTCTGGTGATGATTTTTCAGTGCCCAGTAAGAAC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTTAGGAATGAACTCCTaGAGCTGTTTCACGGCAGAA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLGMNS*SCFTAE Trigger: TTCTGCCGTGAAACAGCTTCAGGAGTTCATTCCTAA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTTGACTGCTGATCTGTaGGAACTTGAGGGCCACGGA | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWLTADL*ELEGHG Trigger: TCCGTGGCCCTCAAGTTCTCACAGATCAGCAGTCAA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCTGGCTCTCCCAGGATaGAGCTTTCCTCTGATGCTT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINLALPG*SFPLML Trigger: AAGCATCAGAGGAAAGCTGCATCCTGGGAGAGCCAG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGAGGTGCTGGTATTCCTaGAGTTTCACCATGCAGGCC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWRCWYS*SFTMQA Trigger: GGCCTGCATGGTGAAACTGCAGGAATACCAGCACCT...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATAACCTTGGCGCCTCTTaGACGTGCTTGCTTGCCAAA | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINNLGAS*TCLLAK Trigger: TTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGAACTTGCTTGGGTGCTaGAGGAGTCTGGATTTTAGT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQNLLGC*RSLDFS Trigger: ACTAAAATCCAGACTCCTGCAGCACCCAAGCAAGTT...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGAAAACTTGCTTGGGTaGTGCAGGAGTCTGGATTTT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQENLLG*CRSLDF Trigger: AAAATCCAGACTCCTGCAGCACCCAAGCAAGTTTTC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGCCATGCATGGCGCCTaGCCTTCGCTTTCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINAMHGA*PSLSFS Trigger: AGAAAAAGAAAGCGAAGGCCAGGCGCCATGCATGGC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTGTGGAAGTGGCATTTaGAGTCTCATCACAGATTCT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQCGSGI*SLITDS Trigger: AGAATCTGTGATGAGACTGCAAATGCCACTTCCACA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGACAACTGTAACACCTaGTTCCTCGTCCACCTCCAA | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINDNCNT*FLVHLQ Trigger: TTGGAGGTGGACGAGGAAGCAGGTGTTACAGTTGTC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTTGCACGTGCTTGCTTaGCAAACAGGCCTGGGTTTT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWLHVLA*QTGLGF Trigger: AAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGTACAGCAGCTTGTCTaGACTCTCAATGCCTGTCAG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWVQQLV*TLNACQ Trigger: CTGACAGGCATTGAGAGTGCAGACAAGCTGCTGTAC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCGAAATGGGAAAACTTaGTTGGGTGCTGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINRNGKT*LGAAGV Trigger: GACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTGTAATTTCACCCCCTaGACCCACAGAAAGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWCNFTP*THRKPG Trigger: TCCTGGCTTTCTGTGGGTCCAGGGGGTGAAATTACA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCACCTTCTTCCATCATaGCGCCATCACCTTCTACTG | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINHLLPS*RHHLLL Trigger: CAGTAGAAGGTGATGGCGCCATGATGGAAGAAGGTG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGACCTCTTTTAACTCCTaGGGAGACATCTTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQTSFNS*GDIFFR Trigger: TCTGAAGAAGATGTCTCCCCAGGAGTTAAAAGAGGT...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATATGGGAAAACTTGCTTaGGTGCTGCAGGAGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINMGKLA*VLQESG Trigger: TCCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCAT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCGTGGGAATGTTTCTaGGGTCTTTCCTTATGTATA | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSWECF*GLSLCI Trigger: TATACATAAGGAAAGACCTCAGAAACATTCCCACGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGACTTAGCAAGTACCTaGAATTTGTCTGTTTTAGGC | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQDLAST*NLSVLG Trigger: GCCTAAAACAGACAAATTTCAGGTACTTGCTAAGTC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGCACCACGATTTCTTTaGCTGCTGATCTGTGAGAAC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINAPRFL*LLICEN Trigger: GTTCTCACAGATCAGCAGTCAAAGAAATCGTGGTGC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCTTCTTCGACAGCCTTaGTTAGTTTCCGGGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWLLRQP*LVSGFQ Trigger: CTGAAACCCGGAAACTAATCAAGGCTGTCGAAGAAG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATATCACCAGACACTCGTaGCCTTTTGACAGACGTAAG | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINITRHS*PFDRRK Trigger: CTTACGTCTGTCAAAAGGGCACGAGTGTCTGGTGAT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTGTCTGCACTCTCAATaGCTGTCAGGGCTAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINCLHSQ*LSGLES Trigger: ACTTTCTAGCCCTGACAGGCATTGAGAGTGCAGACA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCCTTTTTAAGTTGGTaGTCACAGATTTTTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSFLSW*SQIFPQ Trigger: CTGAGGAAAAATCTGTGATCACCAACTTAAAAAGGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTGCCTTTGTAATTGTTaGCATCGAACATCTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQCLCNC*HRTSSL Trigger: CAAAGAAGATGTTCGATGTCAACAATTACAAAGGCA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR TCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCATAAAGGTAGTCGATaGTCTCTGGAAAAGTCTTTT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQHKGSR*SLEKSF Trigger: AAAAGACTTTTCCAGAGATCATCGACTACCTTTATG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGAACTTGCTTGGGTGCTaGAGGAGTCTGGATTTTAGT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWNLLGC*RSLDFS Trigger: ACTAAAATCCAGACTCCTGCAGCACCCAAGCAAGTT...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGAAAACTTGCTTGGGTaGTGCAGGAGTCTGGATTTT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWENLLG*CRSLDF Trigger: AAAATCCAGACTCCTGCAGCACCCAAGCAAGTTTTC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCACCCGGCTAATTTTTaGATTTTTAATAGTGACAGG | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQHPANF*IFNSDR Trigger: CCTGTCACTATTAAAAATGCAAAAATTAGCCGGGTG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR GCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTGTGGATTTCAAATCTaGTTGATTCTCCTTCCATTT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQCGFQI*LILLPF Trigger: AAATGGAAGGAGAATCAAGCAGATTTGAAATCCACA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCTGAATCAAAGAGTGTaGTCTCAGAGTTCTTACTGG | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINLNQRV*SQSSYW Trigger: CCAGTAAGAACTCTGAGAGCACACTCTTTGATTCAG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCTTCTACCCAAGATATaGCCTTGTAGAGTTTTTCCC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWLLPKI*PCRVFP Trigger: GGGAAAAACTCTACAAGGGCATATCTTGGGTAGAAG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATACCTCTTTTAACTCCTaGGGAGACATCTTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINTSFNS*GDIFFR Trigger: TCTGAAGAAGATGTCTCCCCAGGAGTTAAAAGAGGT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATAGTTTGAACGTAAGATaGAGGAACATCACCTATGGC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINSLNVR*RNITYG Trigger: GCCATAGGTGATGTTCCTCCATCTTACGTTCAAACT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGAAAGATGTCTCGAAATaGGAAAACTTGCTTGGGTGC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWKDVSK*ENLLGC Trigger: GCACCCAAGCAAGTTTTCCCATTTCGAGACATCTTT...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGAAAGAGTAGAACTCTaGCCATTGTACATTCTTTAT | + |
Preference number: 4 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQERVEL*PLYILY Trigger: ATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGTTTTTATAAGCAGGTaGTGGTATTCCTGCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWVFISR*WYSCSF Trigger: GAAACTGCAGGAATACCAGCACCTGCTTATAAAAAC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTCTCAGAGTTCTTACTaGGCACTGAAAAATCATCAC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWSQSSY*ALKNHH Trigger: GTGATGATTTTTCAGTGCCCAGTAAGAACTCTGAGA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCTTTCAGGATTTTCTTaGAGTTTGGAATCCACCTCT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINLSGFS*SLESTS Trigger: AGAGGTGGATTCCAAACTCCAAGAAAATCCTGAAAG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGTAGTCGATGATCTCTaGAAAAGTCTTTTTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWVVDDL*KSLFLP Trigger: TGGCAGAAAAAGACTTTTCCAGAGATCATCGACTAC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGTAGTCGATGATCTCTaGAAAAGTCTTTTTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINVVDDL*KSLFLP Trigger: TGGCAGAAAAAGACTTTTCCAGAGATCATCGACTAC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGATGCAGCTTTCCTCTaGTGCTTTTTATTCTTTTTC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINDAAFL*CFLFFF Trigger: GAAAAAGAATAAAAAGCATCAGAGGAAAGCTGCATC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR TCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTCCTTTTTAAGTTGGTaGTCACAGATTTTTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWSFLSW*SQIFPQ Trigger: CTGAGGAAAAATCTGTGATCACCAACTTAAAAAGGA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTGCCTTTGTAATTGTTaGCATCGAACATCTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWCLCNC*HRTSSL Trigger: CAAAGAAGATGTTCGATGTCAACAATTACAAAGGCA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR TCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCATAAAGGTAGTCGATaGTCTCTGGAAAAGTCTTTT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINHKGSR*SLEKSF Trigger: AAAAGACTTTTCCAGAGATCATCGACTACCTTTATG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATAATAGCGACACCTTGTaGTTTAAATTCCTTAAACCG | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINNSDTL*FKFLKP Trigger: CGGTTTAAGGAATTTAAAGCACAAGGTGTCGCTATT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCACTTACTTTTACACTaGATCCAATTTCTGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINHLLLH*IQFLVC Trigger: GCAAACCAGAAATTGGATGCAGTGTAAAAGTAAGTG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR GCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCACTTACTTTTACACTaGATCCAATTTCTGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWHLLLH*IQFLVC Trigger: GCAAACCAGAAATTGGATGCAGTGTAAAAGTAAGTG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTTTCTTGTCAGAAACTaGAGTGTGGATTTCAAATCT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWFLVRN*SVDFKS Trigger: AGATTTGAAATCCACACTCCAGTTTCTGACAAGAAA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGATTTTCTTGGAGTTTaGAATCCACCTCTTTTAACT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWDFLGV*NPPLLT Trigger: AGTTAAAAGAGGTGGATTCCAAACTCCAAGAAAATC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGATTTTCTTGGAGTTTaGAATCCACCTCTTTTAACT | + |
Preference number: 4 (lower is better) Translates to: SRGKSRTLAIVHSLLNINDFLGV*NPPLLT Trigger: AGTTAAAAGAGGTGGATTCCAAACTCCAAGAAAATC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CCA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGAAAGAGTAGAACTCTaGCCATTGTACATTCTTTAT | + |
Preference number: 4 (lower is better) Translates to: LIGMAIYFNAPEERVELWERVEL*PLYILY Trigger: ATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS TCA 90 bp | ACCCCCTGGACCCACAGAAAGCCAGGACTCCTCCTGGTGGGATTCTaGCTGAGGCAGGGTGTCCCTTGCCCGCTGGCTCTCCCAGGATGC | + |
Preference number: 5 (lower is better) Translates to: TPWTHRKPGLLLVGF*LRQGVPCPLALPGC Trigger: GCATCCTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAGGAGTCCTGGCTTTCTGTGGGTCCAGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS TCA 90 bp | CCTGGACCCACAGAAAGCCAGGACTCCTCCTGGTGGGATTCTGACTaGGGCAGGGTGTCCCTTGCCCGCTGGCTCTCCCAGGATGCAGCT | + |
Preference number: 5 (lower is better) Translates to: PGPTESQDSSWWDSD*GRVSLARWLSQDAA Trigger: AGCTGCATCCTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAGGAGTCCTGGCTTTCTGTGGGTCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGAGGCAGGGTGTCCCTaGCCCGCTGGCTCTCCCAGG | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWEAGCP*PAGSPR Trigger: CCTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCTC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCCCGGTACATCCGCTaGATTGTGCTGGTGGCCCTG | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSRYIR*IVLVAL Trigger: CAGGGCCACCAGCACAATCAAGCGGATGTACCGGGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTGCGGTGGTGCGATCTaGGCTCACTGCAACCTCCAC | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQCGGAI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGCACCACCGCA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS TCA 90 bp | ACTCCTGGGGAGACATCTTCTTCAGAATCACTTCTTCGACAGCCTTaGTTAGTTTCCGGGTTTCAGACTTACTCCAAGCACCACGATTTC | + |
Preference number: 5 (lower is better) Translates to: TPGETSSSESLLRQP*LVSGFQTYSKHHDF Trigger: GAAATCGTGGTGCTTGGAGTAAGTCTGAAACCCGGAAACTAATCAAGGCTGTCGAAGAAGTGATTCTGAAGAAGATGTCTCCCCAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCTTGCACGTGCTTGCTaGCCAAACAGGCCTGGGTTT | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLARAC*PNRPGF Trigger: AAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
||
CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTTGCAGGTTCTAACCTaGGCGCCTCTTGCACGTGCT | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLQVLT*APLARA Trigger: AGCACGTGCAAGAGGCGCCAAGGTTAGAACCTGCAA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
||
CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCTGATCTGTGAGAACTaGAGGGCCACGGAGAGGCTA | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQLICEN*RATERL Trigger: TAGCCTCTCCGTGGCCCTCAAGTTCTCACAGATCAG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCAATAAGGCTGACCTaGGCCCGCAGGGCATTCATG | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSIRLT*ARRAFM Trigger: CATGAATGCCCTGCGGGCCAAGGTCAGCCTTATTGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATGCCTCTTGCACGTGCTaGCTTGCCAAACAGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINASCTC*LAKQAW Trigger: CCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGC...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
||
CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTCCCGGTACATCCGCTaGATTGTGCTGGTGGCCCTG | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINSRYIR*IVLVAL Trigger: CAGGGCCACCAGCACAATCAAGCGGATGTACCGGGA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGAATGGGAAAACTTGCTaGGGTGCTGCAGGAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQNGKTC*GAAGVW Trigger: CCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCATT...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTGCGGTGGTGCGATCTaGGCTCACTGCAACCTCCAC | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWCGGAI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGCACCACCGCA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGACACTCGTGCCCTTTaGACAGACGTAAGCTTCCTT | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQDTRAL*TDVSFL Trigger: AAGGAAGCTTACGTCTGTCAAAAGGGCACGAGTGTC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
||
CDS GCA 90 bp | TTCGCTATACCTGCCTTTGTAATTGTTGACATCGAACATCTTCTTTaGTCGATAGTATATAAGTTTCCAGGGCCGGGCAATGTTCCTACC | + |
Preference number: 5 (lower is better) Translates to: FAIPAFVIVDIEHLL*SIVYKFPGPGNVPT Trigger: GGTAGGAACATTGCCCGGCCCTGGAAACTTATATACTATCGAGCAAAGAAGATGTTCGATGTCAACAATTACAAAGGCAGGTATAGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCTGATCTGTGAGAACTaGAGGGCCACGGAGAGGCTA | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWLICEN*RATERL Trigger: TAGCCTCTCCGTGGCCCTCAAGTTCTCACAGATCAG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTCAATAAGGCTGACCTaGGCCCGCAGGGCATTCATG | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWSIRLT*ARRAFM Trigger: CATGAATGCCCTGCGGGCCAAGGTCAGCCTTATTGA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS TCA 90 bp | TTTCTTTTTCTTGTCAGAAACTGGAGTGTGGATTTCAAATCTGCTTaGTTCTCCTTCCATTTTATTCCCTCCGAAAGCGCCGCCACCTTT | + |
Preference number: 5 (lower is better) Translates to: FLFLVRNWSVDFKSA*FSFHFIPSESAATF Trigger: AAAGGTGGCGGCGCTTTCGGAGGGAATAAAATGGAAGGAGAATCAAGCAGATTTGAAATCCACACTCCAGTTTCTGACAAGAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CCA 90 bp | CTTTCAGGATTTTCTTGGAGTTTGGAATCCACCTCTTTTAACTCCTaGGGAGACATCTTCTTCAGAATCACTTCTTCGACAGCCTTGATT | + |
Preference number: 5 (lower is better) Translates to: LSGFSWSLESTSFNS*GDIFFRITSSTALI Trigger: AATCAAGGCTGTCGAAGAAGTGATTCTGAAGAAGATGTCTCCCCAGGAGTTAAAAGAGGTGGATTCCAAACTCCAAGAAAATCCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGGCCTGGGTTTTCTTTaGTCGGGGCCTAGATTTCAC | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWGLGFL*SGPRFH Trigger: GTGAAATCTAGGCCCCGACAAAAGAAAACCCAGGCC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGCTGGTGGCCCTGTCCTaGATGTTAGGAATGAACTCC | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWLVALS*MLGMNS Trigger: GGAGTTCATTCCTAACATCAAGGACAGGGCCACCAG...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCTGGTGGCCCTGTCCTaGATGTTAGGAATGAACTCC | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINLVALS*MLGMNS Trigger: GGAGTTCATTCCTAACATCAAGGACAGGGCCACCAG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTCCGTGTACAGCAGCTaGTCTGCACTCTCAATGCCT | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWSVYSS*SALSMP Trigger: AGGCATTGAGAGTGCAGACAAGCTGCTGTACACGGA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
||
CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATAATGGGAAAACTTGCTaGGGTGCTGCAGGAGTCTGG | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINNGKTC*GAAGVW Trigger: CCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCATT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCATTGTGTTCTTCATTaGCAGGTTCTAACCCTCCGA | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQHCVLH*QVLTLR Trigger: TCGGAGGGTTAGAACCTGCAAATGAAGAACACAATG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGTACTGTTGGATTCCTaGAACCCTTTAAGAGCTGTA | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQVLLDS*NPLRAV Trigger: TACAGCTCTTAAAGGGTTCAAGGAATCCAACAGTAC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGTCAGCTGTTTCCACATaGTGTTCTTCATTTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQSAVST*CSSFAG Trigger: ACCTGCAAATGAAGAACACAATGTGGAAACAGCTGA...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCCATTAGTCATCCTCTaGGTTAGAATTTCTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQPLVIL*VRISVH Trigger: GTGGACAGAAATTCTAACCAAGAGGATGACTAATGG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGTCGAAATGGGAAAACTaGCTTGGGTGCTGCAGGAGT | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWSKWEN*LGCCRS Trigger: ACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCGA...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTCGAAATGGGAAAACTaGCTTGGGTGCTGCAGGAGT | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINSKWEN*LGCCRS Trigger: ACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCGA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS TCA 90 bp | CTGTGCAGGGCTTCTGATTTATGTGCATGTGACTTAGCAAGTACCTaGAATTTGTCTGTTTTAGGCTTTCTTGGTAACTTCTGTTCTATG | + |
Preference number: 5 (lower is better) Translates to: LCRASDLCACDLAST*NLSVLGFLGNFCSM Trigger: CATAGAACAGAAGTTACCAAGAAAGCCTAAAACAGACAAATTTCAGGTACTTGCTAAGTCACATGCACATAAATCAGAAGCCCTGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGGTTTTTCCCGAACAATaGATAGGCAACTTTCAGGAT | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQVFPEQ*IGNFQD Trigger: ATCCTGAAAGTTGCCTATCAATTGTTCGGGAAAAAC...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCATTGTGTTCTTCATTaGCAGGTTCTAACCTTGGCG | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINHCVLH*QVLTLA Trigger: CGCCAAGGTTAGAACCTGCAAATGAAGAACACAATG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGACTTCTTCGACAGCCTaGATTAGTTTCCGGGTTTCA | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWTSSTA*ISFRVS Trigger: TGAAACCCGGAAACTAATCAAGGCTGTCGAAGAAGT...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | ACCCGGCTAATTTTTGCATTTTTAATAGTGACAGGTCTTCACCATGTTGGTCAGCCTAGAAAATTTAGTTaGAACGTAAGATGGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: TRLIFAFLIVTGLHHVGQPRKFS*NVRWRN Trigger: GTTCCTCCATCTTACGTTCAAACTAAATTTTCTAGG...CTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATACTTTCAGGATTTTCTaGGAGTTTGGAATCCACCTC | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINTFRIF*EFGIHL Trigger: GAGGTGGATTCCAAACTCCAAGAAAATCCTGAAAGT...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCCATTAGTCATCCTCTaGGTTAGAATTTCTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINPLVIL*VRISVH Trigger: GTGGACAGAAATTCTAACCAAGAGGATGACTAATGG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TTAATAGGAATGGCAATATATTTTAATGCTCCAGAGGAAAGAGTAGAACTCTGGGTTTTTCCCGAACAATaGATAGGCAACTTTCAGGAT | + |
Preference number: 5 (lower is better) Translates to: LIGMAIYFNAPEERVELWVFPEQ*IGNFQD Trigger: ATCCTGAAAGTTGCCTATCAATTGTTCGGGAAAAAC...CCAGAGTTCTACTCTTTCCTCTGGAGCATTAAAATATATTGCCATTCCTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATTTCTTCTTTGTACTGTaGGATTCCTTGAACCCTTTA | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINFFFVL*DSLNPL Trigger: TAAAGGGTTCAAGGAATCCAACAGTACAAAGAAGAA...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS-3UTR CAA 90 bp | TCCAGAGGAAAGAGTAGAACTCTGGCCATTGTACATTCTTTATTAAACATCAATCCTAGAAAATTTAGTTaGAACGTAAGATGGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: SRGKSRTLAIVHSLLNINPRKFS*NVRWRN Trigger: GTTCCTCCATCTTACGTTCAAACTAAATTTTCTAGG...ATTGATGTTTAATAAAGAATGTACAATGGCCAGAGTTCTACTCTTTCCTCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS TCA 72 bp | ACAGAAAGCCAGGACTCCTCCTGGTGGGATTCTGACTaGGGCAGGGTGTCCCTTGCCCGCTGGCTCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: TESQDSSWWDSD*GRVSLARWLSQ Trigger: CTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAGGAGTCCTGGCTTTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS TCA 72 bp | ACCCACAGAAAGCCAGGACTCCTCCTGGTGGGATTCTaGCTGAGGCAGGGTGTCCCTTGCCCGCTGGCTCTC | + |
Preference number: 6 (lower is better) Translates to: THRKPGLLLVGF*LRQGVPCPLAL Trigger: GAGAGCCAGCGGGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAGGAGTCCTGGCTTTCTGTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 90 bp | GCCAGGACTCCTCCTGGTGGGATTCTGACTGAGGCAGGGTGTCCCTaGCCCGCTGGCTCTCCCAGGATGCAGCTTTCCTCTGATGCTTTT | + |
Preference number: 6 (lower is better) Translates to: ARTPPGGILTEAGCP*PAGSPRMQLSSDAF Trigger: AAAAGCATCAGAGGAAAGCTGCATCCTGGGAGAGCCAGCGGGCAAGGGACACCCTGCCTCAGTCAGAATCCCACCAGGAGGAGTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS GCA 72 bp | GTTTCATCATCCAAGCCCACAGTAGGCTGGGATTCCTaGATATCAGTCCCGGCCTCTCTGCCTGCTTGCGAT | + |
Preference number: 6 (lower is better) Translates to: VSSSKPTVGWDS*ISVPASLPACD Trigger: ATCGCAAGCAGGCAGAGAGGCCGGGACTGATATGCAGGAATCCCAGCCTACTGTGGGCTTGGATGATGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 90 bp | CGCCTCTTGCACGTGCTTGCTTGCCAAACAGGCCTGGGTTTTCTTTaGTCGGGGCCTAGATTTCACACCTTCTTCCATCATGGCGCCATC | + |
Preference number: 6 (lower is better) Translates to: RLLHVLACQTGLGFL*SGPRFHTFFHHGAI Trigger: GATGGCGCCATGATGGAAGAAGGTGTGAAATCTAGGCCCCGACAAAAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS TCA 72 bp | ACTCCAAGCACCACGATTTCTTTGACTGCTGATCTGTaGGAACTTGAGGGCCACGGAGAGGCTACTTCGGGC | + |
Preference number: 6 (lower is better) Translates to: TPSTTISLTADL*ELEGHGEATSG Trigger: GCCCGAAGTAGCCTCTCCGTGGCCCTCAAGTTCTCACAGATCAGCAGTCAAAGAAATCGTGGTGCTTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS GCA 72 bp | TTGCAGGTTCTAACCTTGGCGCCTCTTGCACGTGCTTaGTTGCCAAACAGGCCTGGGTTTTCTTTTGTCGGG | + |
Preference number: 6 (lower is better) Translates to: LQVLTLAPLARA*LPNRPGFSFVG Trigger: CCCGACAAAAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTTAGAACCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 72 bp | TTTGCAGGTTCTAACCTTGGCGCCTCTTGCACGTGCTaGCTTGCCAAACAGGCCTGGGTTTTCTTTTGTCGG | + |
Preference number: 6 (lower is better) Translates to: FAGSNLGASCTC*LAKQAWVFFCR Trigger: CCGACAAAAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTTAGAACCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 72 bp | TCCTTAAACCGTTCCAAGTCGTCCCGGTACATCCGCTaGATTGTGCTGGTGGCCCTGTCCTTGATGTTAGGA | + |
Preference number: 6 (lower is better) Translates to: SLNRSKSSRYIR*IVLVALSLMLG Trigger: TCCTAACATCAAGGACAGGGCCACCAGCACAATCAAGCGGATGTACCGGGACGACTTGGAACGGTTTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS GCA 72 bp | TCATTTGCAGGTTCTAACCTTGGCGCCTCTTGCACGTaGTTGCTTGCCAAACAGGCCTGGGTTTTCTTTTGT | + |
Preference number: 6 (lower is better) Translates to: SFAGSNLGASCT*LLAKQAWVFFC Trigger: ACAAAAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTTAGAACCTGCAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 72 bp | CACGTGCTTGCTTGCCAAACAGGCCTGGGTTTTCTTTaGTCGGGGCCTAGATTTCACACCTTCTTCCATCAT | + |
Preference number: 6 (lower is better) Translates to: HVLACQTGLGFL*SGPRFHTFFHH Trigger: ATGATGGAAGAAGGTGTGAAATCTAGGCCCCGACAAAAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 90 bp | GCTTTAAATTCCTTAAACCGTTCCAAGTCGTCCCGGTACATCCGCTaGATTGTGCTGGTGGCCCTGTCCTTGATGTTAGGAATGAACTCC | + |
Preference number: 6 (lower is better) Translates to: ALNSLNRSKSSRYIR*IVLVALSLMLGMNS Trigger: GGAGTTCATTCCTAACATCAAGGACAGGGCCACCAGCACAATCAAGCGGATGTACCGGGACGACTTGGAACGGTTTAAGGAATTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS TCA 72 bp | CACACCTTCTTCCATCATGGCGCCATCACCTTCTACTaGATCAAAGAGTGTGCTCTCAGAGTTCTTACTGGG | + |
Preference number: 6 (lower is better) Translates to: HTFFHHGAITFY*IKECALRVLTG Trigger: CCCAGTAAGAACTCTGAGAGCACACTCTTTGATTCAGTAGAAGGTGATGGCGCCATGATGGAAGAAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 72 bp | GATTTTTCCTCAGGATATCTGTCCGTGTACAGCAGCTaGTCTGCACTCTCAATGCCTGTCAGGGCTAGAAAG | + |
Preference number: 6 (lower is better) Translates to: DFSSGYLSVYSS*SALSMPVRARK Trigger: CTTTCTAGCCCTGACAGGCATTGAGAGTGCAGACAAGCTGCTGTACACGGACAGATATCCTGAGGAAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 90 bp | GTGATCACAGATTTTTCCTCAGGATATCTGTCCGTGTACAGCAGCTaGTCTGCACTCTCAATGCCTGTCAGGGCTAGAAAGTCTTCCACA | + |
Preference number: 6 (lower is better) Translates to: VITDFSSGYLSVYSS*SALSMPVRARKSST Trigger: TGTGGAAGACTTTCTAGCCCTGACAGGCATTGAGAGTGCAGACAAGCTGCTGTACACGGACAGATATCCTGAGGAAAAATCTGTGATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CCA 72 bp | CTACTGAATCAAAGAGTGTGCTCTCAGAGTTCTTACTaGGCACTGAAAAATCATCACCAGACACTCGTGCCC | + |
Preference number: 6 (lower is better) Translates to: LLNQRVCSQSSY*ALKNHHQTLVP Trigger: GGGCACGAGTGTCTGGTGATGATTTTTCAGTGCCCAGTAAGAACTCTGAGAGCACACTCTTTGATTCAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS TCA 72 bp | ATCAAAGAGTGTGCTCTCAGAGTTCTTACTGGGCACTaGAAAATCATCACCAGACACTCGTGCCCTTTTGAC | + |
Preference number: 6 (lower is better) Translates to: IKECALRVLTGH*KIITRHSCPFD Trigger: GTCAAAAGGGCACGAGTGTCTGGTGATGATTTTTCAGTGCCCAGTAAGAACTCTGAGAGCACACTCTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS TCA 72 bp | GAGACATCTTCTTCAGAATCACTTCTTCGACAGCCTTaGTTAGTTTCCGGGTTTCAGACTTACTCCAAGCAC | + |
Preference number: 6 (lower is better) Translates to: ETSSSESLLRQP*LVSGFQTYSKH Trigger: GTGCTTGGAGTAAGTCTGAAACCCGGAAACTAATCAAGGCTGTCGAAGAAGTGATTCTGAAGAAGATGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 72 bp | GGCACTGAAAAATCATCACCAGACACTCGTGCCCTTTaGACAGACGTAAGCTTCCTTTTCTTAGACTTCTTC | + |
Preference number: 6 (lower is better) Translates to: GTEKSSPDTRAL*TDVSFLFLDFF Trigger: GAAGAAGTCTAAGAAAAGGAAGCTTACGTCTGTCAAAAGGGCACGAGTGTCTGGTGATGATTTTTCAGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS GCA 72 bp | CCTGCCTTTGTAATTGTTGACATCGAACATCTTCTTTaGTCGATAGTATATAAGTTTCCAGGGCCGGGCAAT | + |
Preference number: 6 (lower is better) Translates to: PAFVIVDIEHLL*SIVYKFPGPGN Trigger: ATTGCCCGGCCCTGGAAACTTATATACTATCGAGCAAAGAAGATGTTCGATGTCAACAATTACAAAGGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 90 bp | TTCTTACTGGGCACTGAAAAATCATCACCAGACACTCGTGCCCTTTaGACAGACGTAAGCTTCCTTTTCTTAGACTTCTTCTTTGTACTG | + |
Preference number: 6 (lower is better) Translates to: FLLGTEKSSPDTRAL*TDVSFLFLDFFFVL Trigger: CAGTACAAAGAAGAAGTCTAAGAAAAGGAAGCTTACGTCTGTCAAAAGGGCACGAGTGTCTGGTGATGATTTTTCAGTGCCCAGTAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CCA 72 bp | TTCACTATCGTCTTCATAATAAAAGATGTCTCGAAATaGGAAAACTTGCTTGGGTGCTGCAGGAGTCTGGAT | + |
Preference number: 6 (lower is better) Translates to: FTIVFIIKDVSK*ENLLGCCRSLD Trigger: ATCCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCGAGACATCTTTTATTATGAAGACGATAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000334270.3 ENST00000461970.1 ENST00000612514.4 |
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CDS CAA 72 bp | AAGTATCTTATTTCGGAATCTTCAGCTGTTTCCACATaGTGTTCTTCATTTGCAGGTTCTAACCTTGGCGCC | + |
Preference number: 6 (lower is better) Translates to: KYLISESSAVST*CSSFAGSNLGA Trigger: GGCGCCAAGGTTAGAACCTGCAAATGAAGAACACAATGTGGAAACAGCTGAAGATTCCGAAATAAGATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS CAA 72 bp | CCCAAGATATGCCCTTGTAGAGTTTTTCCCGAACAATaGATAGGCAACTTTCAGGATTTTCTTGGAGTTTGG | + |
Preference number: 6 (lower is better) Translates to: PKICPCRVFPEQ*IGNFQDFLGVW Trigger: CCAAACTCCAAGAAAATCCTGAAAGTTGCCTATCAATTGTTCGGGAAAAACTCTACAAGGGCATATCTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 90 bp | CTACTTCTACCCAAGATATGCCCTTGTAGAGTTTTTCCCGAACAATaGATAGGCAACTTTCAGGATTTTCTTGGAGTTTGGAATCCACCT | + |
Preference number: 6 (lower is better) Translates to: LLLPKICPCRVFPEQ*IGNFQDFLGVWNPP Trigger: AGGTGGATTCCAAACTCCAAGAAAATCCTGAAAGTTGCCTATCAATTGTTCGGGAAAAACTCTACAAGGGCATATCTTGGGTAGAAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 90 bp | CTGCCAAAATGGAACATAGACAGCTTTCAGCCTAGAAAATTTAGTTaGAACGTAAGATGGAGGAACATCACCTATGGCACTAGCAAGATC | + |
Preference number: 6 (lower is better) Translates to: LPKWNIDSFQPRKFS*NVRWRNITYGTSKI Trigger: GATCTTGCTAGTGCCATAGGTGATGTTCCTCCATCTTACGTTCAAACTAAATTTTCTAGGCTGAAAGCTGTCTATGTTCCATTTTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CCA 72 bp | AGCTTTCAGCCTAGAAAATTTAGTTTGAACGTAAGATaGAGGAACATCACCTATGGCACTAGCAAGATCTTC | + |
Preference number: 6 (lower is better) Translates to: SFQPRKFSLNVR*RNITYGTSKIF Trigger: GAAGATCTTGCTAGTGCCATAGGTGATGTTCCTCCATCTTACGTTCAAACTAAATTTTCTAGGCTGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |
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CDS CAA 72 bp | AAGTATCTTATTTCGGAATCTTCAGCTGTTTCCACATaGTGTTCTTCATTTGCAGGTTCTAACCCTCCGAAA | + |
Preference number: 6 (lower is better) Translates to: KYLISESSAVST*CSSFAGSNPPK Trigger: TTTCGGAGGGTTAGAACCTGCAAATGAAGAACACAATGTGGAAACAGCTGAAGATTCCGAAATAAGATACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612514.4 |
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CDS TCA 72 bp | GCTTCTGATTTATGTGCATGTGACTTAGCAAGTACCTaGAATTTGTCTGTTTTAGGCTTTCTTGGTAACTTC | + |
Preference number: 6 (lower is better) Translates to: ASDLCACDLAST*NLSVLGFLGNF Trigger: GAAGTTACCAAGAAAGCCTAAAACAGACAAATTTCAGGTACTTGCTAAGTCACATGCACATAAATCAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334270.3 |
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CDS GCA 72 bp | CTCTTGGTTAGAATTTCTGTCCACTTACTTTTACACTaGATCCAATTTCTGGTTTGCACTTTAGCTTCTACT | + |
Preference number: 6 (lower is better) Translates to: LLVRISVHLLLH*IQFLVCTLAST Trigger: AGTAGAAGCTAAAGTGCAAACCAGAAATTGGATGCAGTGTAAAAGTAAGTGGACAGAAATTCTAACCAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334270.3 ENST00000612514.4 |