RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000133985

Ensembl transcript IDs: ENST00000256367.3

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTTCTGCGGTCACAGCTGCCTGCTGGGTGGGAGTCCGGGGGAATaGTATGTGTGGTCACCAGAGGGCACTGAGTGGGCTTCAGTGGCA +
Preference number: 1 (lower is better)
Translates to: PFCGHSCLLGGSPGE*YVWSPEGTEWASVA
Trigger: TGCCACTGAAGCCCACTCAGTGCCCTCTGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp TCACCTACACAGTCAACCTGTCCCAAACCTTGGCCCACTTCATCCTaGCCTTCTGCGGTCACAGCTGCCTGCTGGGTGGGAGTCCGGGGG +
Preference number: 1 (lower is better)
Translates to: SPTQSTCPKPWPTSS*PSAVTAACWVGVRG
Trigger: CCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAAGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTTGACTGTGTAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp TCCCAAACCTTGGCCCACTTCATCCTGCCCTTCTGCGGTCACAGCTaGCTGCTGGGTGGGAGTCCGGGGGAATGGTATGTGTGGTCACCA +
Preference number: 1 (lower is better)
Translates to: SQTLAHFILPFCGHS*LLGGSPGEWYVWSP
Trigger: TGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAAGGGCAGGATGAAGTGGGCCAAGGTTTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GTGGAAGGATCCAGCCCATGGGCTGTGTGCCTGCTGCCTGTGGGATaGTACACTTGCCAGGCTCCGCCTCTGTCAGAAGCACTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: VEGSSPWAVCLLPVG*YTCQAPPLSEALAK
Trigger: TTTGGCCAGTGCTTCTGACAGAGGCGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GGTCACAGCTGCCTGCTGGGTGGGAGTCCGGGGGAATGGTATGTGTaGTCACCAGAGGGCACTGAGTGGGCTTCAGTGGCATGTGAATCC +
Preference number: 1 (lower is better)
Translates to: GHSCLLGGSPGEWYV*SPEGTEWASVACES
Trigger: GGATTCACATGCCACTGAAGCCCACTCAGTGCCCTCTGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp CTCCTCTCCAGCTGTCCCAGCAGAAGTCAGGCCCCTCTCAGTCGCTaGCCTGCTAGAGGAGAGGATGTCTCCATTGTCTGGGCGACCTAC +
Preference number: 1 (lower is better)
Translates to: LLSSCPSRSQAPLSR*PARGEDVSIVWATY
Trigger: GTAGGTCGCCCAGACAATGGAGACATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGCCTGACTTCTGCTGGGACAGCTGGAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp ACAGTCAACCTGTCCCAAACCTTGGCCCACTTCATCCTGCCCTTCTaGGGTCACAGCTGCCTGCTGGGTGGGAGTCCGGGGGAATGGTAT +
Preference number: 1 (lower is better)
Translates to: TVNLSQTLAHFILPF*GHSCLLGGSPGEWY
Trigger: ATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAAGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp AAAGTGTGGAAGGATCCAGCCCATGGGCTGTGTGCCTGCTGCCTGTaGGATGGTACACTTGCCAGGCTCCGCCTCTGTCAGAAGCACTGG +
Preference number: 1 (lower is better)
Translates to: KVWKDPAHGLCACCL*DGTLARLRLCQKHW
Trigger: CCAGTGCTTCTGACAGAGGCGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCACACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATaGGCTGTGTGCCTGCTGCCTGTGGGATGGTACACTTGCCAGGCT +
Preference number: 1 (lower is better)
Translates to: ALVLVCQESVEGSSP*AVCLLPVGWYTCQA
Trigger: AGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GGGCTTCAGTGGCATGTGAATCCTGGCAGAGTCTCGGATCCCCGATaGGGAGAGGAGAAAGCACAAGCCAAGACAACGAGTGGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: GLQWHVNPGRVSDPR*GEEKAQAKTTSGGR
Trigger: CCTTCCCCCACTCGTTGTCTTGGCTTGTGCTTTCTCCTCTCCCCATCGGGGATCCGAGACTCTGCCAGGATTCACATGCCACTGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp TGGTCACCAGAGGGCACTGAGTGGGCTTCAGTGGCATGTGAATCCTaGCAGAGTCTCGGATCCCCGATGGGGAGAGGAGAAAGCACAAGC +
Preference number: 1 (lower is better)
Translates to: WSPEGTEWASVACES*QSLGSPMGRGESTS
Trigger: GCTTGTGCTTTCTCCTCTCCCCATCGGGGATCCGAGACTCTGCCAGGATTCACATGCCACTGAAGCCCACTCAGTGCCCTCTGGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp CAGAAGCACTGGCCAAAGTCAAAGCCACAACAGCATCCCAGCCCATaGGACTCCTCTCCAGCTGTCCCAGCAGAAGTCAGGCCCCTCTCA +
Preference number: 1 (lower is better)
Translates to: QKHWPKSKPQQHPSP*DSSPAVPAEVRPLS
Trigger: TGAGAGGGGCCTGACTTCTGCTGGGACAGCTGGAGAGGAGTCTCATGGGCTGGGATGCTGTTGTGGCTTTGACTTTGGCCAGTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTaGAAGGATCCAGCCCATGGGCTGTGTGCCTGCTGCCTGTGGGAT +
Preference number: 1 (lower is better)
Translates to: NSCLEMLWFWSVRKV*KDPAHGLCACCLWD
Trigger: ATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp TCTCGTCCCTGGATTTCTAACAGTTGCCTCGAGATGCTCTGGTTCTaGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGCTGTGT +
Preference number: 1 (lower is better)
Translates to: SRPWISNSCLEMLWF*SVRKVWKDPAHGLC
Trigger: ACACAGCCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp TGTTTGTCTCGTCCCTGGATTTCTAACAGTTGCCTCGAGATGCTCTaGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGG +
Preference number: 1 (lower is better)
Translates to: CLSRPWISNSCLEML*FWSVRKVWKDPAHG
Trigger: CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp GAGTCCTTCCTGACGCACAAAGACCAAGGGAAGACCCTGGCAGTTTaGACTCATTCTCCAGGTGACCTCTACCCTTCTCTTCATCCTTCA +
Preference number: 1 (lower is better)
Translates to: ESFLTHKDQGKTLAV*THSPGDLYPSLHPS
Trigger: TGAAGGATGAAGAGAAGGGTAGAGGTCACCTGGAGAATGAGTTCAAACTGCCAGGGTCTTCCCTTGGTCTTTGTGCGTCAGGAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp GAGAGGATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTaGATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: ERMSPLSGRPTRFQI*ISPFRTGRRQRAGV
Trigger: CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp TTCTCTGTTTGTCTCGTCCCTGGATTTCTAACAGTTGCCTCGAGATaGTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCC +
Preference number: 1 (lower is better)
Translates to: FSVCLVPGFLTVASR*SGSGLSGKCGRIQP
Trigger: GGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACAAACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp TCACCAGCGCTTCTCTGTTTGTCTCGTCCCTGGATTTCTAACAGTTaGCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: SPALLCLSRPWISNS*LEMLWFWSVRKVWK
Trigger: CTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACAAACAGAGAAGCGCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 90 bp AACTTACGCTGCTCTCTTCTGGGCCCCTCGGCTGTGATTGGATCCTaGCGTGGTGGGGCATCTGCTTACATAATTAACCCATATTTAACT +
Preference number: 1 (lower is better)
Translates to: NLRCSLLGPSAVIGS*RGGASAYIINPYLT
Trigger: AGTTAAATATGGGTTAATTATGTAAGCAGATGCCCCACCACGGCAGGATCCAATCACAGCCGAGGGGCCCAGAAGAGAGCAGCGTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GCAACATGGCATAGCATAACGAGCACAGACATCAGGAGACTAGGCTaGGATGAAATTAGTTTAAGGCAGGAGAGCCAGTCTGCAGTCATA +
Preference number: 1 (lower is better)
Translates to: ATWHSITSTDIRRLG*DEISLRQESQSAVI
Trigger: TATGACTGCAGACTGGCTCTCCTGCCTTAAACTAATTTCATCCCAGCCTAGTCTCCTGATGTCTGTGCTCGTTATGCTATGCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp TGGAGTTCCAGTAAGCCTGTATATCTAAGTCACCAAACAAGCAGATaGCCTGGACGCTTGTTCTATGAGGTTCTGAGAGGCTGTCTTCAT +
Preference number: 1 (lower is better)
Translates to: WSSSKPVYLSHQTSR*PGRLFYEVLRGCLH
Trigger: ATGAAGACAGCCTCTCAGAACCTCATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGTGACTTAGATATACAGGCTTACTGGAACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp ATGTTGAGTTCAGATAATTTCATCAAAAGAAGATTGTACAAGTTCTaGCAAAGCCAAGCCCCTGGGCAGTCTCCACAATCCCAGCCCACT +
Preference number: 1 (lower is better)
Translates to: MLSSDNFIKRRLYKF*QSQAPGQSPQSQPT
Trigger: AGTGGGCTGGGATTGTGGAGACTGCCCAGGGGCTTGGCTTTGTCAGAACTTGTACAATCTTCTTTTGATGAAATTATCTGAACTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 90 bp TTGAAGACTGAGACGACATCCCATGTCCCACAGCATATTGCACAATaGTGGGCAAACAATATGCCCTCAGTAAGTGTTTCTTGTTTGACT +
Preference number: 1 (lower is better)
Translates to: LKTETTSHVPQHIAQ*WANNMPSVSVSCLT
Trigger: AGTCAAACAAGAAACACTTACTGAGGGCATATTGTTTGCCCATCATTGTGCAATATGCTGTGGGACATGGGATGTCGTCTCAGTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 90 bp GTAGCTTTTTCTCTTTGGGATTATTTAACTTCAGGTCACAGTGAATaGAGTTCCAGTAAGCCTGTATATCTAAGTCACCAAACAAGCAGA +
Preference number: 1 (lower is better)
Translates to: VAFSLWDYLTSGHSE*SSSKPVYLSHQTSR
Trigger: TCTGCTTGTTTGGTGACTTAGATATACAGGCTTACTGGAACTCCATTCACTGTGACCTGAAGTTAAATAATCCCAAAGAGAAAAAGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCGTCCCCGGTCAGGCGTaGGCGCAGCTCTGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTVPGQA*AQLWSC
Trigger: GCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGAC...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCGTCACAGCTGCCTGCTaGGTGGGAGTCCGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSVTAAC*VGVRGN
Trigger: ATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGAC...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCGTCACCAGAGGGCACTaGGTGGGCTTCAGTGGCATG +
Preference number: 2 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSVTRGH*VGFSGM
Trigger: CATGCCACTGAAGCCCACTCAGTGCCCTCTGGTGAC...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTCTCTCTGCCAGGGGATaGCTGGAAGTCCCCGGTCAG +
Preference number: 2 (lower is better)
Translates to: TPVYTLTVSMLASPALLCLSARG*LEVPGQ
Trigger: CTGACCGGGGACTTCCAGGCATCCCCTGGCAGAGAG...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATTCTGCGGTCACAGCTaGCTGCTGGGTGGGAGTCCG +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKFCGHS*LLGGSP
Trigger: CGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 90 bp GGGGTGGGGGTGGGAACTCCAGTGTACACATTGACAGTCTCTATGTaGGCTTCACCAGCGCTTCTCTGTTTGTCTCGTCCCTGGATTTCT +
Preference number: 2 (lower is better)
Translates to: GVGVGTPVYTLTVSM*ASPALLCLSRPWIS
Trigger: AGAAATCCAGGGACGAGACAAACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGTTCCCACCCCCACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCGGGCTGTGTGCCTGCTaGCTGTGGGATGGTACACTT +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTGLCAC*LWDGTL
Trigger: AAGTGTACCATCCCACAGGCAGCAGGCACACAGCCC...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGCTCTCCTTTTCGTACTaGGAGGAGACAAAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGLSFSY*EETKSW
Trigger: CCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAG...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 90 bp AGGCCCCTCTCAGTCGCTGACCTGCTAGAGGAGAGGATGTCTCCATaGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: RPLSVADLLEERMSP*SGRPTRFQICISPF
Trigger: AAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTGGGCCCCTCGGCTGTaGTTGGATCCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMWAPRL*LDPAVV
Trigger: CACCACGGCAGGATCCAATCACAGCCGAGGGGCCCA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGGGGGTCGGGGCGTTTaGACACATTCCCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMGGRGV*THSRVG
Trigger: CCCCACACGGGAATGTGTTCAAACGCCCCGACCCCC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGCTGCCAGGGGATGCCTaGAAGTCCCCGGTCAGGCGT +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMLPGDA*KSPVRR
Trigger: ACGCCTGACCGGGGACTTCCAGGCATCCCCTGGCAG...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 90 bp GGAGAGGATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTaGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GEDVSIVWATYQIPN*HLSFSYWEETKSWG
Trigger: ACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGAGCCCATGGGCTGTGTaGCTGCTGCCTGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMSPWAV*LLPVGW
Trigger: CCATCCCACAGGCAGCAGGCACACAGCCCATGGGCT...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCTCTGTCAGGAAAGTGTaGAAGGATCCAGCCCATGGG +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTSVRKV*KDPAHG
Trigger: CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGA...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGGGGAATGGTATGTGTaGTCACCAGAGGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKGEWYV*SPEGTE
Trigger: CTCAGTGCCCTCTGGTGACCACACATACCATTCCCC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAGCCCCTCTCAGTCGCTaGCCTGCTAGAGGAGAGGAT +
Preference number: 2 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTAPLSR*PARGED
Trigger: ATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGC...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCCATTTCCTTGAAGACTaGGACGACATCCCATGTCCC +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTHFLED*DDIPCP
Trigger: GGGACATGGGATGTCGTCTCAGTCTTCAAGGAAATG...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCACCCTTCCATTTCCTTaGAGACTGAGACGACATCCC +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTTLPFP*RLRRHP
Trigger: GGGATGTCGTCTCAGTCTTCAAGGAAATGGAAGGGT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCGATGTCTCCATTGTCTaGGCGACCTACCAGATTCCA +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTDVSIV*ATYQIP
Trigger: TGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACACTGCTGCCTGTGGGATaGTACACTTGCCAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTLLPVG*YTCQAP
Trigger: CGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAG...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCACCCTTTCCCAATGCTaGGGATGGGTGATGAATGCT +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTTLSQC*GWVMNA
Trigger: AGCATTCATCACCCATCCCCAGCATTGGGAAAGGGT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGATTGGATCCTGCCGTaGTGGGGCATCTGCTTACAT +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKDWILP*WGICLH
Trigger: ATGTAAGCAGATGCCCCACCACGGCAGGATCCAATC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 90 bp TACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTTaGTCTCGTCCCTGGATTTCTAACAGTTGCCTCGAGATGCTCTGG +
Preference number: 2 (lower is better)
Translates to: YTLTVSMLASPALLC*SRPWISNSCLEMLW
Trigger: CCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACAAACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGTGCTTCCAACAGAACTaGCAGGAACTACTACCTGTT +
Preference number: 2 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWCFQQN*QELLPV
Trigger: AACAGGTAGTAGTTCCTGTCAGTTCTGTTGGAAGCA...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCTGGATTTCTAACAGTTaGCTCGAGATGCTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSWISNS*LEMLWF
Trigger: GAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCA...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGTGACCCTTTCCCAATaGTGGGGATGGGTGATGAAT +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKVTLSQ*WGWVMN
Trigger: ATTCATCACCCATCCCCAGCATTGGGAAAGGGTCAC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCCTCCAGTGTACACATTaGCAGTCTCTATGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: NHILDCPALPQHTHVNKTLQCTH*QSLCWL
Trigger: AAGCCAACATAGAGACTGTCAATGTGTACACTGGAG...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAAACTCATTCTCCAGGTaGCCTCTACCCTTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKNSFSR*PLPFSS
Trigger: TGAAGAGAAGGGTAGAGGTCACCTGGAGAATGAGTT...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGGCTTCAGTGGCATGTaGATCCTGGCAGAGTCTCGG +
Preference number: 2 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSGFSGM*ILAESR
Trigger: CCGAGACTCTGCCAGGATTCACATGCCACTGAAGCC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAACAGGACGGGGCTCTCTaGCAGGGGATGCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKQDGAL*QGMPGS
Trigger: ACTTCCAGGCATCCCCTGGCAGAGAGCCCCGTCCTG...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGTAGCCACCATTGTCTaGCACTGGACAAACGGCCAA +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMVATIV*HWTNGQ
Trigger: TTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTAC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGTGCCTGCTGCCTGTaGGATGGTACACTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSCACCL*DGTLAR
Trigger: CCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGAAGACCCTGGCAGTTTaGACTCATTCTCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMKTLAV*THSPGD
Trigger: GTCACCTGGAGAATGAGTTCAAACTGCCAGGGTCTT...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATGTCCCACAGCATATTaGACAATGATGGGCAAACAA +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKCPTAY*TMMGKQ
Trigger: TTGTTTGCCCATCATTGTGCAATATGCTGTGGGACA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTGGATCCTGCCGTGGTaGGGCATCTGCTTACATAAT +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMWILPW*GICLHN
Trigger: ATTATGTAAGCAGATGCCCCACCACGGCAGGATCCA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATACCAGATTCCAAATTTaGATCTCTCCTTTTCGTACT +
Preference number: 2 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDTRFQI*ISPFRT
Trigger: AGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGT...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGCTGTGATTGGATCCTaGCGTGGTGGGGCATCTGCT +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKAVIGS*RGGASA
Trigger: AGCAGATGCCCCACCACGGCAGGATCCAATCACAGC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 90 bp GAGGAGAAGGAAGCTGAAGATTTGGTAGGGAGAATGAACCTGGTTTaGTGCTCTAAAGCCTTTGTTGGACAAATGCACAGAAAATTCAGC +
Preference number: 2 (lower is better)
Translates to: EEKEAEDLVGRMNLV*CSKAFVGQMHRKFS
Trigger: GCTGAATTTTCTGTGCATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAAATCTTCAGCTTCCTTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTGTTTGTCTCGTCCCTaGATTTCTAACAGTTGCCTC +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMCLSRP*ISNSCL
Trigger: GAGGCAACTGTTAGAAATCCAGGGACGAGACAAACA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGTCTCGGATCCCCGATaGGGAGAGGAGAAAGCACAA +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKVSDPR*GEEKAQ
Trigger: TTGTGCTTTCTCCTCTCCCCATCGGGGATCCGAGAC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAACAAAGCCAAGCCCCTaGGCAGTCTCCACAATCCCA +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKTKPSP*AVSTIP
Trigger: TGGGATTGTGGAGACTGCCCAGGGGCTTGGCTTTGT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAATCCTGTAGCCCCCGTTaGAAGCCTTTGGGGAACTAT +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKSCSPR*KPLGNY
Trigger: ATAGTTCCCCAAAGGCTTTCAACGGGGGCTACAGGA...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGTATCCCAGAGTAACTaGATGAAAGAAATGAGATTA +
Preference number: 2 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKVSQSN*MKEMRL
Trigger: TAATCTCATTTCTTTCATGCAGTTACTCTGGGATAC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAACTGAGTGGGCTTCAGTaGCATGTGAATCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKLSGLQ*HVNPGR
Trigger: TCTGCCAGGATTCACATGCCACTGAAGCCCACTCAG...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGCTACAATCATATCCTaGATTGTCCAGCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKATIIS*IVQPCP
Trigger: GGGGCAGGGCTGGACAATCCAGGATATGATTGTAGC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGGAGAATGTGGCAGCTaGAATAGCTTCTTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSGECGS*NSFFLF
Trigger: GAAAAGGAAGAAGCTATTTCAGCTGCCACATTCTCC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGTTCTATGAGGTTCTaGGAGGCTGTCTTCATTTCG +
Preference number: 2 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSCSMRF*EAVFIS
Trigger: CGAAATGAAGACAGCCTCTCAGAACCTCATAGAACA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTCTTTCTACATGGGATaGCTACAATCATATCCTGGA +
Preference number: 2 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMSFYMG*LQSYPG
Trigger: TCCAGGATATGATTGTAGCCATCCCATGTAGAAAGA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAACTATTGGACCTCAGCTaGCTTTTTCTGACCTGTCAC +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKLLDLS*LFLTCH
Trigger: GTGACAGGTCAGAAAAAGGCAGCTGAGGTCCAATAG...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGCAGGAGAGCCAGTCTaGAGTCATAATTTATTCATT +
Preference number: 2 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKAGEPV*SHNLFI
Trigger: AATGAATAAATTATGACTGCAGACTGGCTCTCCTGC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp TCCAGCCCATGGGCTGTGTGCCTGCTGCCTGTGGGATaGTACACTTGCCAGGCTCCGCCTCTGTCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: SSPWAVCLLPVG*YTCQAPPLSEA
Trigger: TGCTTCTGACAGAGGCGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp TGCCTGCTGGGTGGGAGTCCGGGGGAATGGTATGTGTaGTCACCAGAGGGCACTGAGTGGGCTTCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: CLLGGSPGEWYV*SPEGTEWASVA
Trigger: TGCCACTGAAGCCCACTCAGTGCCCTCTGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 72 bp CAGTCAACCTGTCCCAAACCTTGGCCCACTTCATCCTaGCCTTCTGCGGTCACAGCTGCCTGCTGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: QSTCPKPWPTSS*PSAVTAACWVG
Trigger: TCCCACCCAGCAGGCAGCTGTGACCGCAGAAGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp GAGGGCACTGAGTGGGCTTCAGTGGCATGTGAATCCTaGCAGAGTCTCGGATCCCCGATGGGGAGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: EGTEWASVACES*QSLGSPMGRGE
Trigger: TTCTCCTCTCCCCATCGGGGATCCGAGACTCTGCCAGGATTCACATGCCACTGAAGCCCACTCAGTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp AGCTGTCCCAGCAGAAGTCAGGCCCCTCTCAGTCGCTaGCCTGCTAGAGGAGAGGATGTCTCCATTGTCTGG +
Preference number: 3 (lower is better)
Translates to: SCPSRSQAPLSR*PARGEDVSIVW
Trigger: CCAGACAATGGAGACATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGCCTGACTTCTGCTGGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp GGTACACTTGCCAGGCTCCGCCTCTGTCAGAAGCACTaGCCAAAGTCAAAGCCACAACAGCATCCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: GTLARLRLCQKH*PKSKPQQHPSP
Trigger: TGGGCTGGGATGCTGTTGTGGCTTTGACTTTGGCCAGTGCTTCTGACAGAGGCGGAGCCTGGCAAGTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp CTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATaGGCTGTGTGCCTGCTGCCTGTGGGATGGTACACT +
Preference number: 3 (lower is better)
Translates to: LVCQESVEGSSP*AVCLLPVGWYT
Trigger: AGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp ATAACTTACGCTGCTCTCTTCTGGGCCCCTCGGCTGTaGTTGGATCCTGCCGTGGTGGGGCATCTGCTTACA +
Preference number: 3 (lower is better)
Translates to: ITYAALFWAPRL*LDPAVVGHLLT
Trigger: TGTAAGCAGATGCCCCACCACGGCAGGATCCAATCACAGCCGAGGGGCCCAGAAGAGAGCAGCGTAAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp GGGGAATGGTATGTGTGGTCACCAGAGGGCACTGAGTaGGCTTCAGTGGCATGTGAATCCTGGCAGAGTCTC +
Preference number: 3 (lower is better)
Translates to: GEWYVWSPEGTE*ASVACESWQSL
Trigger: GAGACTCTGCCAGGATTCACATGCCACTGAAGCCCACTCAGTGCCCTCTGGTGACCACACATACCATTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp CTTACGCTGCTCTCTTCTGGGCCCCTCGGCTGTGATTaGATCCTGCCGTGGTGGGGCATCTGCTTACATAAT +
Preference number: 3 (lower is better)
Translates to: LTLLSSGPLGCD*ILPWWGICLHN
Trigger: ATTATGTAAGCAGATGCCCCACCACGGCAGGATCCAATCACAGCCGAGGGGCCCAGAAGAGAGCAGCGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 72 bp TGCTCTCTTCTGGGCCCCTCGGCTGTGATTGGATCCTaGCGTGGTGGGGCATCTGCTTACATAATTAACCCA +
Preference number: 3 (lower is better)
Translates to: CSLLGPSAVIGS*RGGASAYIINP
Trigger: TGGGTTAATTATGTAAGCAGATGCCCCACCACGGCAGGATCCAATCACAGCCGAGGGGCCCAGAAGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp GGACCTCAGCTGCCTTTTTCTGACCTGTCACTGCTCTaGCTACTAGGGATTCTGGCCTCTGGTCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: GPQLPFSDLSLL*LLGILASGLLG
Trigger: CCCCAAAAGACCAGAGGCCAGAATCCCTAGTAGTCAGAGCAGTGACAGGTCAGAAAAAGGCAGCTGAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAAACCTGTCCCAAACCTaGGCCCACTTCATCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKNLSQT*AHFILP
Trigger: GGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTT...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 72 bp TGTCTCGTCCCTGGATTTCTAACAGTTGCCTCGAGATaGTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: CLVPGFLTVASR*SGSGLSGKCGR
Trigger: CCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp CGTCCCTGGATTTCTAACAGTTGCCTCGAGATGCTCTaGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCA +
Preference number: 3 (lower is better)
Translates to: RPWISNSCLEML*FWSVRKVWKDP
Trigger: TGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCTTGACAGTCTCTATGTaGGCTTCACCAGCGCTTCTC +
Preference number: 3 (lower is better)
Translates to: NHILDCPALPQHTHVNKTLTVSM*ASPALL
Trigger: GAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAA...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATGGACAAACGGCCAATaGCTTTGGGGAAAGCCCCAT +
Preference number: 3 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKWTNGQ*LWGKPH
Trigger: ATGGGGCTTTCCCCAAAGCAATTGGCCGTTTGTCCA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp TGGATTTCTAACAGTTGCCTCGAGATGCTCTGGTTCTaGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCAT +
Preference number: 3 (lower is better)
Translates to: WISNSCLEMLWF*SVRKVWKDPAH
Trigger: ATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp CTTTCCCAATGCTGGGGATGGGTGATGAATGCTAGGTaGGTTGTTGAGATACATGCTGGCTCCATCAGTAAG +
Preference number: 3 (lower is better)
Translates to: LSQCWGWVMNAR*VVEIHAGSISK
Trigger: CTTACTGATGGAGCCAGCATGTATCTCAACAACTCACCTAGCATTCATCACCCATCCCCAGCATTGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR GCA 72 bp ACTCTTAAAAGCACAAAGGCTGTAGCCACCATTGTCTaGCACTGGACAAACGGCCAATTGCTTTGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: TLKSTKAVATIV*HWTNGQLLWGK
Trigger: CTTTCCCCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGTGCTTTTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGAGAGGATGTCTCCATaGTCTGGGCGACCTACCAGA +
Preference number: 3 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMERMSP*SGRPTR
Trigger: TCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCACTCCAGTGTACACATaGACAGTCTCTATGTTGGCT +
Preference number: 3 (lower is better)
Translates to: NHILDCPALPQHTHVNKTTPVYT*TVSMLA
Trigger: AGCCAACATAGAGACTGTCAATGTGTACACTGGAGT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGCTGGCCTCTGGTCTTTaGGGGCCCTTGAGTAAATAC +
Preference number: 3 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMLASGL*GPLSKY
Trigger: GTATTTACTCAAGGGCCCCAAAAGACCAGAGGCCAG...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp TCACCAAACAAGCAGATGACCTGGACGCTTGTTCTATaGGGTTCTGAGAGGCTGTCTTCATTTCGTTCTGGT +
Preference number: 3 (lower is better)
Translates to: SPNKQMTWTLVL*GSERLSSFRSG
Trigger: ACCAGAACGAAATGAAGACAGCCTCTCAGAACCTCATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp CATAGCATAACGAGCACAGACATCAGGAGACTAGGCTaGGATGAAATTAGTTTAAGGCAGGAGAGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: HSITSTDIRRLG*DEISLRQESQS
Trigger: AGACTGGCTCTCCTGCCTTAAACTAATTTCATCCCAGCCTAGTCTCCTGATGTCTGTGCTCGTTATGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCAAACGGCCAATTGCTTaGGGGAAAGCCCCATCCTGC +
Preference number: 3 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSKRPIA*GKAPSC
Trigger: GCAGGATGGGGCTTTCCCCAAAGCAATTGGCCGTTT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp GAGACGACATCCCATGTCCCACAGCATATTGCACAATaGTGGGCAAACAATATGCCCTCAGTAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: ETTSHVPQHIAQ*WANNMPSVSVS
Trigger: AGAAACACTTACTGAGGGCATATTGTTTGCCCATCATTGTGCAATATGCTGTGGGACATGGGATGTCGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp AGTAAGCCTGTATATCTAAGTCACCAAACAAGCAGATaGCCTGGACGCTTGTTCTATGAGGTTCTGAGAGGC +
Preference number: 3 (lower is better)
Translates to: SKPVYLSHQTSR*PGRLFYEVLRG
Trigger: GCCTCTCAGAACCTCATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGTGACTTAGATATACAGGCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp CCCTCAATATTTCTAGCACCTTCCTGTAGCCCCCGTTaGAAGCCTTTGGGGAACTATGTGAATATAACTTAC +
Preference number: 3 (lower is better)
Translates to: PSIFLAPSCSPR*KPLGNYVNITY
Trigger: GTAAGTTATATTCACATAGTTCCCCAAAGGCTTTCAACGGGGGCTACAGGAAGGTGCTAGAAATATTGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGTAAGTGTTTCTTGTTaGACTGAAGCAACATGGCAT +
Preference number: 3 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMVSVSC*TEATWH
Trigger: ATGCCATGTTGCTTCAGTCAAACAAGAAACACTTAC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGTGCTCTAAAGCCTTaGTTGGACAAATGCACAGAA +
Preference number: 3 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSCALKP*LDKCTE
Trigger: TTCTGTGCATTTGTCCAACAAAGGCTTTAGAGCACA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCAGAATGAACCTGGTTTaGTGCTCTAAAGCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSRMNLV*CSKAFV
Trigger: AACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR TCA 72 bp AGTAAAAGTGAGGGAGTGGGCTGCTTCCAACAGAACTaGCAGGAACTACTACCTGTTAATTTGTTTTTATTT +
Preference number: 3 (lower is better)
Translates to: SKSEGVGCFQQN*QELLPVNLFLF
Trigger: AAATAAAAACAAATTAACAGGTAGTAGTTCCTGTCAGTTCTGTTGGAAGCAGCCCACTCCCTCACTTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp TCTCTTTGGGATTATTTAACTTCAGGTCACAGTGAATaGAGTTCCAGTAAGCCTGTATATCTAAGTCACCAA +
Preference number: 3 (lower is better)
Translates to: SLWDYLTSGHSE*SSSKPVYLSHQ
Trigger: TTGGTGACTTAGATATACAGGCTTACTGGAACTCCATTCACTGTGACCTGAAGTTAAATAATCCCAAAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CCA 72 bp AAACATCAACCAATACCCCAGGTAGCTTTTTCTCTTTaGGATTATTTAACTTCAGGTCACAGTGAATGGAGT +
Preference number: 3 (lower is better)
Translates to: KHQPIPQVAFSL*DYLTSGHSEWS
Trigger: ACTCCATTCACTGTGACCTGAAGTTAAATAATCCCAAAGAGAAAAAGCTACCTGGGGTATTGGTTGATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR-3UTR CAA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAATACCAGATTCCAAATTaGCATCTCTCCTTTTCGTAC +
Preference number: 3 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKYQIPN*HLSFSY
Trigger: GTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTA...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGCACCCCGCGGCGGTCTaGCGCCCCGCACTCCCATTC +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGHPAAV*RPALPF
Trigger: GAATGGGAGTGCGGGGCGCCAGACCGCCGCGGGGTG...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGCTTCGTGGCGGCCGTaGCACCCCGCGGCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKASWRP*HPAAVW
Trigger: CCAGACCGCCGCGGGGTGTCACGGCCGCCACGAAGC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGGTCCCCGGTCAGGCGTaGGCGCAGCTCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWVPGQA*AQLWSC
Trigger: GCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGAC...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGGTCACCAGAGGGCACTaGGTGGGCTTCAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGVTRGH*VGFSGM
Trigger: CATGCCACTGAAGCCCACTCAGTGCCCTCTGGTGAC...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACACGTGCGCTCGTCGGATaGGCTCGGCCGGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTRALVG*ARPARP
Trigger: CGGCCGAGCCGGCCGAGCTCATCCGACGAGCGCACG...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCTCCCATTCTCCCCGCTaGTGCCAGAGGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSSHSPR*CQRLLQ
Trigger: CTGGAGCAGCCTCTGGCAGCAGCGGGGAGAATGGGA...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATTCCACCGTCTTGCTCTaGTCCTCCGAGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDSTVLL*SSERRP
Trigger: CGGCCGCCTCTCGGAGGAGCAGAGCAAGACGGTGGA...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATGGGCCCCTCGGCTGTaGTTGGATCCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKWAPRL*LDPAVV
Trigger: CACCACGGCAGGATCCAATCACAGCCGAGGGGCCCA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCAGGACGGGGCTCTCTaGCAGGGGATGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDQDGAL*QGMPGS
Trigger: ACTTCCAGGCATCCCCTGGCAGAGAGCCCCGTCCTG...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGGCGTGGGCGCAGCTCTaGAGCTGCTTCCTGGTTACA +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWAWAQL*SCFLVT
Trigger: TGTAACCAGGAAGCAGCTCCAGAGCTGCGCCCACGC...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 72 bp CACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTaGGGGAAAGCCCCATCCTGCCTGGCTGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HHCLPLDKRPIA*GKAPSCLAVSS
Trigger: GCTACTTACAGCCAGGCAGGATGGGGCTTTCCCCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGCGCCCCTTGGCTTTTaGACTCGTGCGCTCGTCGGA +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKAPLGF*TRALVG
Trigger: TCCGACGAGCGCACGAGTTCAAAAGCCAAGGGGCGC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTTTCTGCGGTCACAGCTaGCTGCTGGGTGGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCFCGHS*LLGGSP
Trigger: CGGACTCCCACCCAGCAGGCAGCTGTGACCGCAGAA...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATGAAGGATCCAGCCCATaGGCTGTGTGCCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDEGSSP*AVCLLP
Trigger: AGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTC...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTCTCTCTGCCAGGGGATaGCTGGAAGTCCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFLSARG*LEVPGQ
Trigger: CTGACCGGGGACTTCCAGGCATCCCCTGGCAGAGAG...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCTGCTGCCTGTGGGATaGTACACTTGCCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVLLPVG*YTCQAP
Trigger: CGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCGTGGCATGTGAATCCTaGCAGAGTCTCGGATCCCCG +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTVACES*QSLGSP
Trigger: CGGGGATCCGAGACTCTGCCAGGATTCACATGCCAC...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGGGGGAATGGTATGTGTaGTCACCAGAGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWGEWYV*SPEGTE
Trigger: CTCAGTGCCCTCTGGTGACCACACATACCATTCCCC...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTCAGCTGCCTGCTGGGTaGGAGTCCGGGGGAATGGTA +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFQLPAG*ESGGMV
Trigger: TACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTG...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGGTAAGTAGCTCTGATTaGGGGTTGGAGGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGVSSSD*GLEEGV
Trigger: TACTCCTTCCTCCAACCCTCAATCAGAGCTACTTAC...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCACTCGGAGTCCTTCCTaGCGCACAAAGACCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTTRSPS*RTKTKG
Trigger: TCCCTTGGTCTTTGTGCGTCAGGAAGGACTCCGAGT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTGTGGGATGGTACACTTaGCAGGCTCCGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCVGWYT*QAPPLS
Trigger: TGACAGAGGCGGAGCCTGGCAAGTGTACCATCCCAC...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGGGGCTGTGTGCCTGCTaGCTGTGGGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVGLCAC*LWDGTL
Trigger: AAGTGTACCATCCCACAGGCAGCAGGCACACAGCCC...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATGGCCCACTTCATCCTaGCCTTCTGCGGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKWPTSS*PSAVTA
Trigger: AGCTGTGACCGCAGAAGGGCAGGATGAAGTGGGCCA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCCTGAGTGGGCTTCAGTaGCATGTGAATCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSLSGLQ*HVNPGR
Trigger: TCTGCCAGGATTCACATGCCACTGAAGCCCACTCAG...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTGGCTTCAGTGGCATGTaGATCCTGGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFGFSGM*ILAESR
Trigger: CCGAGACTCTGCCAGGATTCACATGCCACTGAAGCC...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCACCCTTCCATTTCCTTaGAGACTGAGACGACATCCC +
Preference number: 4 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSTLPFP*RLRRHP
Trigger: GGGATGTCGTCTCAGTCTTCAAGGAAATGGAAGGGT...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGACCTGTCACTGCTCTaGCTACTAGGGATTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKDLSLL*LLGILA
Trigger: GGCCAGAATCCCTAGTAGTCAGAGCAGTGACAGGTC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAAGAGTGAGCTCTAGGTaGGTAATGGCAGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKRVSSR*VMAGPS
Trigger: TGAGGGGCCTGCCATTACTCACCTAGAGCTCACTCT...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGTGGCTTTTGAACTCGTaGGCTCGTCGGATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVWLLNS*ARRMSS
Trigger: CGAGCTCATCCGACGAGCGCACGAGTTCAAAAGCCA...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCGGACAAACGGCCAATTaGTTTGGGGAAAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTGQTAN*FGESPI
Trigger: GATGGGGCTTTCCCCAAAGCAATTGGCCGTTTGTCC...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCTCCAGCAACGCCCGGTaGTATTTGCCTATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTSSNAR*YLPMAS
Trigger: TGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGA...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGGAGGAGACAAAGAGCTaGGGTGCAACAGGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWEETKS*GATGGK
Trigger: TTTTCCTCCTGTTGCACCCCAGCTCTTTGTCTCCTC...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTTGTGCCTGCTGCCTGTaGGATGGTACACTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFCACCL*DGTLAR
Trigger: CCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACA...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAGTCACAGCTGCCTGCTaGGTGGGAGTCCGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTVTAAC*VGVRGN
Trigger: ATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGAC...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAACCTGTCCCAAACCTTaGCCCACTTCATCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKTCPKP*PTSSCP
Trigger: AGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGT...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGAACGGCCAATTGCTTTaGGGAAAGCCCCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVNGQLL*GKPHPA
Trigger: GGCAGGATGGGGCTTTCCCCAAAGCAATTGGCCGTT...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGCCCCTCTCAGTCGCTaGCCTGCTAGAGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMAPLSR*PARGED
Trigger: ATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGGGGGTCGGGGCGTTTaGACACATTCCCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSGGRGV*THSRVG
Trigger: CCCCACACGGGAATGTGTTCAAACGCCCCGACCCCC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATAAGACCCTGGCAGTTTaGACTCATTCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDKTLAV*THSPGD
Trigger: GTCACCTGGAGAATGAGTTCAAACTGCCAGGGTCTT...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGTTTCAGGTAGTAGAGTaGTTTGTCATAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGFQVVE*FVIVPK
Trigger: CTTGGGGACTATGACAAAGCACTCTACTACCTGAAA...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGTGTCCCACAGCATATTaGACAATGATGGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGCPTAY*TMMGKQ
Trigger: TTGTTTGCCCATCATTGTGCAATATGCTGTGGGACA...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGTACCTAGTGTTAGGGTaGAGGAAACAGGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWYLVLG*RKQGTL
Trigger: GAGAGTACCCTGTTTCCTGCACCCTAACACTAGGTA...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCAACAGTCGATCTCGATaGCTTCCACCGTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTNSRSR*LPPSCS
Trigger: AGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCCTGCCAGGGGATGCCTaGAAGTCCCCGGTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSLPGDA*KSPVRR
Trigger: ACGCCTGACCGGGGACTTCCAGGCATCCCCTGGCAG...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCCTCTCCTTTTCGTACTaGGAGGAGACAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTLSFSY*EETKSW
Trigger: CCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAG...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCTGCCTCGAGATGCTCTaGTTCTGGTCTGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTCLEML*FWSVRK
Trigger: TTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCA...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTGTCTCGGATCCCCGATaGGGAGAGGAGAAAGCACAA +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFVSDPR*GEEKAQ
Trigger: TTGTGCTTTCTCCTCTCCCCATCGGGGATCCGAGAC...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCCCCCTCGGCTGTGATTaGATCCTGCCGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSPLGCD*ILPWWG
Trigger: GCCCCACCACGGCAGGATCCAATCACAGCCGAGGGG...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTGCTACAATCATATCCTaGATTGTCCAGCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCATIIS*IVQPCP
Trigger: GGGGCAGGGCTGGACAATCCAGGATATGATTGTAGC...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGTGGTTGTTGGGTCCTTaGTTCTTTCAGGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWWLLGP*FFQVVE
Trigger: CTCTACTACCTGAAAGAAGCAAGGACCCAACAACCA...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCAGCCCATGGGCTGTGTaGCTGCTGCCTGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSSPWAV*LLPVGW
Trigger: CCATCCCACAGGCAGCAGGCACACAGCCCATGGGCT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTGTAGCCACCATTGTCTaGCACTGGACAAACGGCCAA +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFVATIV*HWTNGQ
Trigger: TTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTAC...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGGCAGGAGAGCCAGTCTaGAGTCATAATTTATTCATT +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGAGEPV*SHNLFI
Trigger: AATGAATAAATTATGACTGCAGACTGGCTCTCCTGC...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTGTGACCCTTTCCCAATaGTGGGGATGGGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCVTLSQ*WGWVMN
Trigger: ATTCATCACCCATCCCCAGCATTGGGAAAGGGTCAC...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGATGAACCTGGTTTTGTaGTCTAAAGCCTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGMNLVL*SKAFVG
Trigger: TCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCAT...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCTATACCGAATCACGTTaGTGTCTGTTGGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSYTESR*CLLVVG
Trigger: CCCAACAACCAACAGACACCAACGTGATTCGGTATA...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGTTCATCTCCGTCAGCTaGATATACCGAATCACGTTG +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWFISVS*IYRITL
Trigger: CAACGTGATTCGGTATATCCAGCTGACGGAGATGAA...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGGGAGTCCGGGGGAATaGTATGTGTGGTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMGSPGE*YVWSPE
Trigger: CTCTGGTGACCACACATACCATTCCCCCGGACTCCC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGATCAGGAGACTAGGCTaGGATGAAATTAGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGIRRLG*DEISLR
Trigger: CCTTAAACTAATTTCATCCCAGCCTAGTCTCCTGAT...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGTGGATCCTGCCGTGGTaGGGCATCTGCTTACATAAT +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVWILPW*GICLHN
Trigger: ATTATGTAAGCAGATGCCCCACCACGGCAGGATCCA...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATACAAACGTTCTAAGTTaGAGGCTTGGGAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDTNVLS*RLGNGG
Trigger: ACCCCCATTCCCAAGCCTCCAACTTAGAACGTTTGT...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGTCTTTCTACATGGGATaGCTACAATCATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGSFYMG*LQSYPG
Trigger: TCCAGGATATGATTGTAGCCATCCCATGTAGAAAGA...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 72 bp GTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTaGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: VSIVWATYQIPN*HLSFSYWEETK
Trigger: CTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTCTGGGAGCATCGGCTaGGTTTCATCTCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMSGSIG*VSSPSA
Trigger: AGCTGACGGAGATGAAACTCAGCCGATGCTCCCAGA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCACCAAACAAGCAGATaGCCTGGACGCTTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVHQTSR*PGRLFY
Trigger: ATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGTG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTACGCCCGGTGGTATTTaGCTATGGCTTCACGGAATT +
Preference number: 4 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFTPGGI*LWLHGI
Trigger: AATTCCGTGAAGCCATAGGCAAATACCACCGGGCGT...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGGCTTCCACCGTCTTaGTCTGCTCCTCCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSWLPPS*SAPPRG
Trigger: GCCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCTATTGGACCTCAGCTaGCTTTTTCTGACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVLLDLS*LFLTCH
Trigger: GTGACAGGTCAGAAAAAGGCAGCTGAGGTCCAATAG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTGCTTCTTTTTCTCTCTaGGAGCATCGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCASFSL*EHRLSF
Trigger: GAAACTCAGCCGATGCTCCCAGAGAGAAAAAGAAGC...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAACCATTGTCTGCCACTaGACAAACGGCCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKTIVCH*TNGQLL
Trigger: AAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGT...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGAGGGATTCTGGCCTCTaGTCTTTTGGGGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMRDSGL*SFGALE
Trigger: CTCAAGGGCCCCAAAAGACCAGAGGCCAGAATCCCT...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAACCGGTAAAGGGCCTTaGAGTTCTCCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTTGKGP*SSPLPS
Trigger: AGAAGGAAGGGGAGAACTTCAAGGCCCTTTACCGGT...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTCTCCAGTGTACACATTaGCAGTCTCTATGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCLQCTH*QSLCWL
Trigger: AAGCCAACATAGAGACTGTCAATGTGTACACTGGAG...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCGCCATGTACTATCACTaGCATCATGAACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSAMYYH*HHEHFS
Trigger: TGAAAAGTGTTCATGATGTCAGTGATAGTACATGGC...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTCCTGTAGCCCCCGTTaGAAGCCTTTGGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMSCSPR*KPLGNY
Trigger: ATAGTTCCCCAAAGGCTTTCAACGGGGGCTACAGGA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGGGAGAATGTGGCAGCTaGAATAGCTTCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVGECGS*NSFFLF
Trigger: GAAAAGGAAGAAGCTATTTCAGCTGCCACATTCTCC...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTTGTTCTATGAGGTTCTaGGAGGCTGTCTTCATTTCG +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCCSMRF*EAVFIS
Trigger: CGAAATGAAGACAGCCTCTCAGAACCTCATAGAACA...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGCTGTGATTGGATCCTaGCGTGGTGGGGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSAVIGS*RGGASA
Trigger: AGCAGATGCCCCACCACGGCAGGATCCAATCACAGC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTTGTTTGTCTCGTCCCTaGATTTCTAACAGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPVYTLTVSMLASPALLCCLSRP*ISNSCL
Trigger: GAGGCAACTGTTAGAAATCCAGGGACGAGACAAACA...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 72 bp TCTTTCTACATGGGATGGCTACAATCATATCCTGGATaGTCCAGCCCTGCCCCAGCACACTCATGTAAACAA +
Preference number: 4 (lower is better)
Translates to: SFYMGWLQSYPG*SSPAPAHSCKQ
Trigger: TTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATTGTAGCCATCCCATGTAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 72 bp GTGACATCCGCAACGTACGGAATTAAATCACAGTTCTaGTTTTGGGGAGGGATGAGGAGAAGGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTSATYGIKSQF*FWGGMRRRKLK
Trigger: CTTCAGCTTCCTTCTCCTCATCCCTCCCCAAAACAAGAACTGTGATTTAATTCCGTACGTTGCGGATGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACACATTTCCTTGAAGACTaGGACGACATCCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTHFLED*DDIPCP
Trigger: GGGACATGGGATGTCGTCTCAGTCTTCAAGGAAATG...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACATCAGCTGCCTTTTTCTaGCCTGTCACTGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTSAAFF*PVTALT
Trigger: AGTCAGAGCAGTGACAGGTCAGAAAAAGGCAGCTGA...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACATGGACGCTTGTTCTATaGGGTTCTGAGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTWTLVL*GSERLS
Trigger: AGACAGCCTCTCAGAACCTCATAGAACAAGCGTCCA...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAAGTCCAGGCAGGGGATaGCAGTGCAGGTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKSPGRG*QCRSDA
Trigger: GGCATCTGACCTGCACTGTCATCCCCTGCCTGGACT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGATCCACAACTGTGTGTaGGTGTGTACATTTACACCA +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVIHNCV*VCTFTP
Trigger: TGGTGTAAATGTACACACGCACACACAGTTGTGGAT...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGGTGGTATTTGCCTATaGCTTCACGGAATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKGGICL*LHGISC
Trigger: ACAAGAAATTCCGTGAAGCCATAGGCAAATACCACC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGCACGTTGGTGTCTGTTaGTTGTTGGGTCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMHVGVC*LLGPCF
Trigger: GAAGCAAGGACCCAACAACCAACAGACACCAACGTG...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCACAAAGCCAAGCCCCTaGGCAGTCTCCACAATCCCA +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSTKPSP*AVSTIP
Trigger: TGGGATTGTGGAGACTGCCCAGGGGCTTGGCTTTGT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAATTGACTGAAGCAACATaGCATAGCATAACGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKLTEAT*HSITST
Trigger: TGTGCTCGTTATGCTATGCCATGTTGCTTCAGTCAA...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAACCCTTTCCCAATGCTaGGGATGGGTGATGAATGCT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTTLSQC*GWVMNA
Trigger: AGCATTCATCACCCATCCCCAGCATTGGGAAAGGGT...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGAATACACGTTTGTCTTaGGTGGTAAGCTTATGGATT +
Preference number: 4 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWNTRLS*VVSLWI
Trigger: AATCCATAAGCTTACCACCCAAGACAAACGTGTATT...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACATGCAGGTCAGATGCCTaGTTAGTACTCCAGCTACAT +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTCRSDA*LVLQLH
Trigger: ATGTAGCTGGAGTACTAATCAGGCATCTGACCTGCA...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAGTGTCTGTTGGTTGTTaGGTCCTTGCTTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTVSVGC*VLASFR
Trigger: CCTGAAAGAAGCAAGGACCCAACAACCAACAGACAC...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGTTCTTACCCATCAAATaGGAACAGTATCCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVFLPIK*EQYPRV
Trigger: TACTCTGGGATACTGTTCCCATTTGATGGGTAAGAA...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGACCAAGGGAAGACCCTaGCAGTTTGAACTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMTKGRP*QFELIL
Trigger: GAGAATGAGTTCAAACTGCCAGGGTCTTCCCTTGGT...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTACATAGGTCAGCAGTaGCATCCGCAACGTACGGAA +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSYIGQQ*HPQRTE
Trigger: TTCCGTACGTTGCGGATGTCACTGCTGACCTATGTA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCGTGATATTATTAAGTaGAGGAACAGAAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVRDIIK*RNRRSK
Trigger: TTTGCTCCTTCTGTTCCTTCACTTAATAATATCACG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGACCAGATTCCAAATTTaGATCTCTCCTTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: FQICISPFRTGRRQRAGVTRFQI*ISPFRT
Trigger: AGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGT...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCACAGTTGCCTCGAGATaGTCTGGTTCTGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSTVASR*SGSGLS
Trigger: TGACAGACCAGAACCAGAGCATCTCGAGGCAACTGT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGGGAAAGCCCCATCCTaGCTGGCTGTAAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKGKAPS*LAVSSS
Trigger: AGAGCTACTTACAGCCAGGCAGGATGGGGCTTTCCC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGAATATAACTTACGCTaGTCTCTTCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSEYNLR*SLLGPS
Trigger: CGAGGGGCCCAGAAGAGAGCAGCGTAAGTTATATTC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp AATCATATCCTGGATTGTCCAGCCCTGCCCCAGCACACTCATGTAAACAAGACCAAGTGTCCAATATGCTaGCATTTGTGTGTGATAAAA +
Preference number: 4 (lower is better)
Translates to: NHILDCPALPQHTHVNKTKCPIC*HLCVIK
Trigger: TTTTATCACACACAAATGGCAGCATATTGGACACTT...GGTCTTGTTTACATGAGTGTGCTGGGGCAGGGCTGGACAATCCAGGATATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTTGGTACAAACTTTCTaGAGGGTGGTTGGCAACATG +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMLVQTF*RVVGNM
Trigger: CATGTTGCCAACCACCCTCCAGAAAGTTTGTACCAA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
3UTR CAA 72 bp GAAGCTGAAGATTTGGTAGGGAGAATGAACCTGGTTTaGTGCTCTAAAGCCTTTGTTGGACAAATGCACAGA +
Preference number: 4 (lower is better)
Translates to: EAEDLVGRMNLV*CSKAFVGQMHR
Trigger: TCTGTGCATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAAATCTTCAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGTGATGAATGCTAGGTaGGTTGTTGAGATACATGCT +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMVMNAR*VVEIHA
Trigger: AGCATGTATCTCAACAACTCACCTAGCATTCATCAC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCAACTCATTCTCCAGGTaGCCTCTACCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSNSFSR*PLPFSS
Trigger: TGAAGAGAAGGGTAGAGGTCACCTGGAGAATGAGTT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGATTGGATCCTGCCGTaGTGGGGCATCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKDWILP*WGICLH
Trigger: ATGTAAGCAGATGCCCCACCACGGCAGGATCCAATC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGGATTTCTAACAGTTaGCTCGAGATGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSWISNS*LEMLWF
Trigger: GAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGATGTCTCCATTGTCTaGGCGACCTACCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKDVSIV*ATYQIP
Trigger: TGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAACAGTGCAGGTCAGATaGCTGATTAGTACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKTVQVR*LISTPA
Trigger: AGCTGGAGTACTAATCAGGCATCTGACCTGCACTGT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTTTGATCTTTCTACATaGGATGGCTACAATCATATC +
Preference number: 4 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMFDLST*DGYNHI
Trigger: GATATGATTGTAGCCATCCCATGTAGAAAGATCAAA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAATCAGGTCACAGTGAATaGAGTTCCAGTAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKSGHSE*SSSKPV
Trigger: TACAGGCTTACTGGAACTCCATTCACTGTGACCTGA...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR TCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAGAGAAGATTTACTTCTaGCTACAGAGCAGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKEKIYF*LQSSLY
Trigger: GTACAAACTGCTCTGTAGTCAGAAGTAAATCTTCTC...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCGTATCCCAGAGTAACTaGATGAAAGAAATGAGATTA +
Preference number: 4 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSVSQSN*MKEMRL
Trigger: TAATCTCATTTCTTTCATGCAGTTACTCTGGGATAC...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR GCA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAAAAAAGTGTCCAATATaGTGCCATTTGTGTGTGATA +
Preference number: 4 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKKKCPI*CHLCVI
Trigger: TATCACACACAAATGGCAGCATATTGGACACTTTTT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
34% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 90 bp CTCTCCATTCGGCCGCCGCCCCGGCGCCTGGTGCGCGCCGCGATCTaGCCGCCGCCGCCGCCGCCGCCGCGCCTTCCCGGGTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: LSIRPPPRRLVRAAI*PPPPPPPRLPGFKS
Trigger: GCTTTTAAACCCGGGAAGGCGCGGCGGCGGCGGCGGCGGCGGGCAGATCGCGGCGCGCACCAGGCGCCGGGGCGGCGGCCGAATGGAGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 90 bp CTGCCAGGCTGTTGTAACAGTCGATCTCGATGGCTTCCACCGTCTTaGTCTGCTCCTCCGAGAGGCGGCCGGGCTTCAGGGCCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: LPGCCNSRSRWLPPS*SAPPRGGRASGPQP
Trigger: CGGCTGGGGCCCTGAAGCCCGGCCGCCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTTACAACAGCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 90 bp CCTGGAGCAGGCAGGCTGCCAGGCTGTTGTAACAGTCGATCTCGATaGCTTCCACCGTCTTGCTCTGCTCCTCCGAGAGGCGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: PGAGRLPGCCNSRSR*LPPSCSAPPRGGRA
Trigger: AGCCCGGCCGCCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTTACAACAGCCTGGCAGCCTGCCTGCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 90 bp GGGGCGGCAGCAGCCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTaGCTATGGCTTCACGGAATTTCTTGTCCTTGTAGCACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GAAAAPSAPATPGGI*LWLHGISCPCSTAP
Trigger: GGGCGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGGCTGCTGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 90 bp GGATGCCTGGAAGTCCCCGGTCAGGCGTGGGCGCAGCTCTGGAGCTaGTTCCTGGTTACATGGCTTCTTTTTCTCTCTGGGAGCATCGGC +
Preference number: 5 (lower is better)
Translates to: GCLEVPGQAWAQLWS*FLVTWLLFLSGSIG
Trigger: GCCGATGCTCCCAGAGAGAAAAAGAAGCCATGTAACCAGGAAGCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGACTTCCAGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 90 bp GCAGCAGCCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTGCCTATaGCTTCACGGAATTTCTTGTCCTTGTAGCACTGCGCCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AAAPSAPATPGGICL*LHGISCPCSTAPLG
Trigger: GCCAAGGGGCGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTTGGGGGTCGGGGCGTTaGAACACATTCCCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: TPVYTLTVSMLASPALLCWGSGR*NTFPCG
Trigger: CCCACACGGGAATGTGTTCAAACGCCCCGACCCCCA...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGGTAGCACTGCGCCCCTaGGCTTTTGAACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: FQICISPFRTGRRQRAGVVALRP*AFELVR
Trigger: GCGCACGAGTTCAAAAGCCAAGGGGCGCAGTGCTAC...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 90 bp GGTGTCTGTTGGTTGTTGGGTCCTTGCTTCTTTCAGGTAGTAGAGTaGTTTGTCATAGTCCCCAAGGTGGTAGAAGGCCACACCAGACCG +
Preference number: 5 (lower is better)
Translates to: GVCWLLGPCFFQVVE*FVIVPKVVEGHTRP
Trigger: CGGTCTGGTGTGGCCTTCTACCACCTTGGGGACTATGACAAAGCACTCTACTACCTGAAAGAAGCAAGGACCCAACAACCAACAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGGTTGGTGTCTGTTGGTaGTTGGGTCCTTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGVGVCW*LGPCFF
Trigger: AAAGAAGCAAGGACCCAACAACCAACAGACACCAAC...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATAAACGGCCAATTGCTTaGGGGAAAGCCCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDKRPIA*GKAPSC
Trigger: GCAGGATGGGGCTTTCCCCAAAGCAATTGGCCGTTT...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGCACAAACGTTCTAAGTaGGAGGCTTGGGAATGGGGG +
Preference number: 5 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWHKRSK*EAWEWG
Trigger: CCCCCATTCCCAAGCCTCCAACTTAGAACGTTTGTG...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGGAGAGGATGTCTCCATaGTCTGGGCGACCTACCAGA +
Preference number: 5 (lower is better)
Translates to: FQICISPFRTGRRQRAGVERMSP*SGRPTR
Trigger: TCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTC...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCTTGACAGTCTCTATGTaGGCTTCACCAGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSLTVSM*ASPALL
Trigger: GAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAA...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGAAGGAAGCTGAAGATTaGGTAGGGAGAATGAACCTG +
Preference number: 5 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGKEAED*VGRMNL
Trigger: CAGGTTCATTCTCCCTACCAAATCTTCAGCTTCCTT...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAATGGCTTCCACCGTCTaGCTCTGCTCCTCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTMASTV*LCSSER
Trigger: CCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCAT...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp AACAGTTGCCTCGAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATGGTGTCTGTTGGTTGTaGGGTCCTTGCTTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: NSCLEMLWFWSVRKVWKDGVCWL*GPCFFQ
Trigger: CTGAAAGAAGCAAGGACCCAACAACCAACAGACACC...ATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAACCAGCGCTTCTCTGTTaGTCTCGTCCCTGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKPALLC*SRPWIS
Trigger: AGAAATCCAGGGACGAGACAAACAGAGAAGCGCTGG...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp ACAAAGGCTGTAGCCACCATTGTCTGCCACTGGACAAACGGCCAATTGCTTTGGAACCCTTCCATTTCCTaGAAGACTGAGACGACATCC +
Preference number: 5 (lower is better)
Translates to: TKAVATIVCHWTNGQLLWNPSIS*KTETTS
Trigger: GGATGTCGTCTCAGTCTTCAAGGAAATGGAAGGGTT...CCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCTGGCCTCTGGTCTTTaGGGGCCCTTGAGTAAATAC +
Preference number: 5 (lower is better)
Translates to: FQICISPFRTGRRQRAGVLASGL*GPLSKY
Trigger: GTATTTACTCAAGGGCCCCAAAAGACCAGAGGCCAG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCAATCCCCTAGCCTATACGATGCTCTTTCCCCTGGCCATCATCTTTCCCTCCATCACAGTTCTTGTTTaGGGGAGGGATGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FNPLAYTMLFPLAIIFPSITVLV*GRDEEK
Trigger: CTTCTCCTCATCCCTCCCCAAAACAAGAACTGTGAT...GGAGGGAAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GAGATGCTCTGGTTCTGGTCTGTCAGGAAAGTGTGGAAGGATCCAGCCCATGGGCAAGCAAGTCTCTTCTaGGAGTTTATCCTAAGGAAA +
Preference number: 5 (lower is better)
Translates to: EMLWFWSVRKVWKDPAHGQASLF*EFILRK
Trigger: TTTCCTTAGGATAAACTCCAAGAAGAGACTTGCTTG...CCCATGGGCTGGATCCTTCCACACTTTCCTGACAGACCAGAACCAGAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTTCACGTTGGTGTCTGTaGGTTGTTGGGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFSRWCL*VVGSLL
Trigger: AAGCAAGGACCCAACAACCAACAGACACCAACGTGA...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp ACTCCAGTGTACACATTGACAGTCTCTATGTTGGCTTCACCAGCGCTTCTCTGTGGTCTTTTGGGGCCCTaGAGTAAATACATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TPVYTLTVSMLASPALLCGLLGP*SKYIRR
Trigger: CCTCCTTATGTATTTACTCAAGGGCCCCAAAAGACC...ACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAATGCGCCCCTTGGCTTTaGAACTCGTGCGCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKCAPWL*NSCARR
Trigger: CCGACGAGCGCACGAGTTCAAAAGCCAAGGGGCGCA...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATGTCTCCATTGTCTGGGCGACCTACCAGATTCCAAATTTGCATCTCTCCTTTACTCCAGTGTACACATaGACAGTCTCTATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: DVSIVWATYQIPNLHLSFTPVYT*TVSMLA
Trigger: AGCCAACATAGAGACTGTCAATGTGTACACTGGAGT...AAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCAACGCCCGGTGGTATTaGCCTATGGCTTCACGGAAT +
Preference number: 5 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSNARWY*PMASRN
Trigger: ATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAAACCTGTCCCAAACCTaGGCCCACTTCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKNLSQT*AHFILP
Trigger: GGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTGGACAAACGGCCAATaGCTTTGGGGAAAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSWTNGQ*LWGKPH
Trigger: ATGGGGCTTTCCCCAAAGCAATTGGCCGTTTGTCCA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp CTCTCCTGTCTCTGCATAGGGAATAATTACTCGGAGTCCTTCCTGACGCACAAAGTAAGTGTTTCTTGTTaGACTGAAGCAACATGGCAT +
Preference number: 5 (lower is better)
Translates to: LSCLCIGNNYSESFLTHKVSVSC*TEATWH
Trigger: ATGCCATGTTGCTTCAGTCAAACAAGAAACACTTAC...TTTGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGCAAAAGAATACACGTTaGTCTTGGGTGGTAAGCTTA +
Preference number: 5 (lower is better)
Translates to: FQICISPFRTGRRQRAGVQKNTR*SWVVSL
Trigger: TAAGCTTACCACCCAAGACAAACGTGTATTCTTTTG...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTTGGTTGTTGGGTCCTaGCTTCTTTCAGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMLVVGS*LLSGSR
Trigger: TCTACTACCTGAAAGAAGCAAGGACCCAACAACCAA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAACAATCATATCCTGGATaGTCCAGCCCTGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKQSYPG*SSPAPA
Trigger: TGCTGGGGCAGGGCTGGACAATCCAGGATATGATTG...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTCCAAATTTGCATCTCTCCTTTTCGTACTGGGAGGAGACAAAGAGCTGGGGTGATTTCGTTCTGGTTTTaGATCTTTCTACATGGGATG +
Preference number: 5 (lower is better)
Translates to: FQICISPFRTGRRQRAGVISFWF*IFLHGM
Trigger: CATCCCATGTAGAAAGATCAAAAACCAGAACGAAAT...CACCCCAGCTCTTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTGTGCTCTAAAGCCTTaGTTGGACAAATGCACAGAA +
Preference number: 5 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMCALKP*LDKCTE
Trigger: TTCTGTGCATTTGTCCAACAAAGGCTTTAGAGCACA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACAATTAAATCACAGTTCTaGTTTTGGGGAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTIKSQF*FWGGMR
Trigger: CCTCATCCCTCCCCAAAACAAGAACTGTGATTTAAT...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGGAATACACGTTTGTCTaGGGTGGTAAGCTTATGGAT +
Preference number: 5 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMEYTFV*GGKLMD
Trigger: ATCCATAAGCTTACCACCCAAGACAAACGTGTATTC...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGTCCTTCTTCAAGACTTaGAGGCAATATTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMSFFKT*RQYSLT
Trigger: AGTCAAGGAATATTGCCTCAAAGTCTTGAAGAAGGA...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCATATACCGAATCACGTaGGTGTCTGTTGGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSIYRIT*VSVGCW
Trigger: CCAACAACCAACAGACACCAACGTGATTCGGTATAT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TTGGTAGGGAGAATGAACCTGGTTTTGTGCTCTAAAGCCTTTGTTGGACAAATGAGAATGAACCTGGTTTaGTGCTCTAAAGCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LVGRMNLVLCSKAFVGQMRMNLV*CSKAFV
Trigger: AACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCT...CATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GGTGAGTTGTTGAGATACATGCTGGCTCCATCAGTAAGTAGAATGAGCAATACATTGAAAGCAAAGCACTaGGAAAGCATATTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GELLRYMLAPSVSRMSNTLKAKH*ESIFAA
Trigger: TGCTGCAAATATGCTTTCCAAGTGCTTTGCTTTCAA...TGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAACAACTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp GATATGCCGAAAATGTTCGTGATATTATTAAGTGAAGGAACAGAAGGAGCAAAAATGCTAGGTGAGTTGTaGAGATACATGCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: DMPKMFVILLSEGTEGAKMLGEL*RYMLAP
Trigger: TGGAGCCAGCATGTATCTCAACAACTCACCTAGCAT...TTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTTTCGGCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCTACCAGATTCCAAATTaGCATCTCTCCTTTTCGTAC +
Preference number: 5 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSYQIPN*HLSFSY
Trigger: GTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTA...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS-3UTR CAA 90 bp TCAAAAGAATACACGTTTGTCTTGGGTGGTAAGCTTATGGATTGGATTTTGTCCACAATGAAGATGCTGTaGAGAAAGTTTGATATGCCG +
Preference number: 5 (lower is better)
Translates to: SKEYTFVLGGKLMDWILSTMKML*RKFDMP
Trigger: CGGCATATCAAACTTTCTCAACAGCATCTTCATTGT...GGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGTGTATTCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 72 bp TCTGCCAGGGGATGCCTGGAAGTCCCCGGTCAGGCGTaGGCGCAGCTCTGGAGCTGCTTCCTGGTTACATGG +
Preference number: 6 (lower is better)
Translates to: SARGCLEVPGQA*AQLWSCFLVTW
Trigger: CCATGTAACCAGGAAGCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGACTTCCAGGCATCCCCTGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 72 bp TGTTGTAACAGTCGATCTCGATGGCTTCCACCGTCTTaGTCTGCTCCTCCGAGAGGCGGCCGGGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: CCNSRSRWLPPS*SAPPRGGRASG
Trigger: CCCTGAAGCCCGGCCGCCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTTACAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 72 bp GGCAGGCTGCCAGGCTGTTGTAACAGTCGATCTCGATaGCTTCCACCGTCTTGCTCTGCTCCTCCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: GRLPGCCNSRSR*LPPSCSAPPRG
Trigger: GCCTCTCGGAGGAGCAGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTTACAACAGCCTGGCAGCCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 72 bp GAAGTCCCCGGTCAGGCGTGGGCGCAGCTCTGGAGCTaGTTCCTGGTTACATGGCTTCTTTTTCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: EVPGQAWAQLWS*FLVTWLLFLSG
Trigger: CCCAGAGAGAAAAAGAAGCCATGTAACCAGGAAGCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CAA 90 bp GCCTATGGCTTCACGGAATTTCTTGTCCTTGTAGCACTGCGCCCCTaGGCTTTTGAACTCGTGCGCTCGTCGGATGAGCTCGGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: AYGFTEFLVLVALRP*AFELVRSSDELGRL
Trigger: GAGCCGGCCGAGCTCATCCGACGAGCGCACGAGTTCAAAAGCCAAGGGGCGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCATAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 72 bp GCAGCCCCTTCAGCTCCAGCAACGCCCGGTGGTATTTaGCTATGGCTTCACGGAATTTCTTGTCCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: AAPSAPATPGGI*LWLHGISCPCS
Trigger: GCTACAAGGACAAGAAATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 72 bp CCTTCAGCTCCAGCAACGCCCGGTGGTATTTGCCTATaGCTTCACGGAATTTCTTGTCCTTGTAGCACTGCG +
Preference number: 6 (lower is better)
Translates to: PSAPATPGGICL*LHGISCPCSTA
Trigger: CGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CCA 72 bp CTCTGGGAGCATCGGCTGAGTTTCATCTCCGTCAGCTaGATATACCGAATCACGTTGGTGTCTGTTGGTTGT +
Preference number: 6 (lower is better)
Translates to: LWEHRLSFISVS*IYRITLVSVGC
Trigger: ACAACCAACAGACACCAACGTGATTCGGTATATCCAGCTGACGGAGATGAAACTCAGCCGATGCTCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 72 bp TGGTTGTTGGGTCCTTGCTTCTTTCAGGTAGTAGAGTaGTTTGTCATAGTCCCCAAGGTGGTAGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: WLLGPCFFQVVE*FVIVPKVVEGH
Trigger: GTGGCCTTCTACCACCTTGGGGACTATGACAAAGCACTCTACTACCTGAAAGAAGCAAGGACCCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS GCA 72 bp CCGAATCACGTTGGTGTCTGTTGGTTGTTGGGTCCTTaGTTCTTTCAGGTAGTAGAGTGCTTTGTCATAGTC +
Preference number: 6 (lower is better)
Translates to: PNHVGVCWLLGP*FFQVVECFVIV
Trigger: GACTATGACAAAGCACTCTACTACCTGAAAGAAGCAAGGACCCAACAACCAACAGACACCAACGTGATTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3
CDS CAA 72 bp ACCGAATCACGTTGGTGTCTGTTGGTTGTTGGGTCCTaGCTTCTTTCAGGTAGTAGAGTGCTTTGTCATAGT +
Preference number: 6 (lower is better)
Translates to: TESRWCLLVVGS*LLSGSRVLCHS
Trigger: ACTATGACAAAGCACTCTACTACCTGAAAGAAGCAAGGACCCAACAACCAACAGACACCAACGTGATTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256367.3