RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTBK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146216

Ensembl transcript IDs: ENST00000259750.9, ENST00000304139.6

Found 812 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCCCTGGGTCCCCAACCCAGCCTGGCAGTCCAGAGGCCGTCCCTaGCCACAATGGCTCCCAGAAGACTGTGGGGCTGGACCCTCGCGG +
Preference number: 1 (lower is better)
Translates to: VPWVPNPAWQSRGRP*PQWLPEDCGAGPSR
Trigger: CCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGACTGCCAGGCTGGGTTGGGGACCCAGGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp GGGGTCGGAGGAGGGCAAGGCGCCGCAGGAGGTGTAGGCAGAGATTaGTGGGGGAGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGA +
Preference number: 1 (lower is better)
Translates to: GVGGGQGAAGGVGRD*WGSMERSLGLVGER
Trigger: TCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCTCCCCCAGCAATCTCTGCCTACACCTCCTGCGGCGCCTTGCCCTCCTCCGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GTCGGAGGAGGGCAAGGCGCCGCAGGAGGTGTAGGCAGAGATTGCTaGGGGAGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACC +
Preference number: 1 (lower is better)
Translates to: VGGGQGAAGGVGRDC*GSMERSLGLVGERT
Trigger: GGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCTCCCCCAGCAATCTCTGCCTACACCTCCTGCGGCGCCTTGCCCTCCTCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GCAGTCCAGAGGCCGTCCCTGGCCACAATGGCTCCCAGAAGACTGTaGGGCTGGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAA +
Preference number: 1 (lower is better)
Translates to: AVQRPSLATMAPRRL*GWTLAGRLEPPLLE
Trigger: TTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp CTCCAGGGGCCAGCTGTCTGTTGGTCCACCTGTCTCTGCTCTCTCTaGCCATTGCGGGAGACGATGCCTGAGCCAGCCCTCCCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: LQGPAVCWSTCLCSL*PLRETMPEPALPPS
Trigger: GGAGGGAGGGAGGGCTGGCTCAGGCATCGTCTCCCGCAATGGGCAGAGAGAGCAGAGACAGGTGGACCAACAGACAGCTGGCCCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GGGGCAGAGGTGAGGCTGGGGGCCCTACATTCACGGTTCGGTTGGTaGCAAGGAGCAGGCCCAGGGCCTGGGCACCAGGAGTCATATCCT +
Preference number: 1 (lower is better)
Translates to: GAEVRLGALHSRFGW*QGAGPGPGHQESYP
Trigger: AGGATATGACTCCTGGTGCCCAGGCCCTGGGCCTGCTCCTTGCCACCAACCGAACCGTGAATGTAGGGCCCCCAGCCTCACCTCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CCTGGGGCAGAGGTGAGGCTGGGGGCCCTACATTCACGGTTCGGTTaGTGGCAAGGAGCAGGCCCAGGGCCTGGGCACCAGGAGTCATAT +
Preference number: 1 (lower is better)
Translates to: PGAEVRLGALHSRFG*WQGAGPGPGHQESY
Trigger: ATATGACTCCTGGTGCCCAGGCCCTGGGCCTGCTCCTTGCCACCAACCGAACCGTGAATGTAGGGCCCCCAGCCTCACCTCTGCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp GGACGTCAAAGGCTGTCCACCCAGGAGTCCTCCCCTCAGCTGGTCTaGAGAGAAGCCACCACCCTGGCCTGGAAGTGGCTGCCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: GRQRLSTQESSPQLV*REATTLAWKWLPKL
Trigger: CAGCTTGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTCTGCAGACCAGCTGAGGGGAGGACTCCTGGGTGGACAGCCTTTGACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CAGAGGCCGTCCCTGGCCACAATGGCTCCCAGAAGACTGTGGGGCTaGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAG +
Preference number: 1 (lower is better)
Translates to: QRPSLATMAPRRLWG*TLAGRLEPPLLEFE
Trigger: CTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CCCTGCAGGCCTCATCTCCCTGACACCTCTCTTTCCACTGGACTCTaGACCCATCAGTGGCTCCAGCTGAGCGCCCCTGCCCTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: PCRPHLPDTSLSTGL*THQWLQLSAPALSW
Trigger: CCAGGACAGGGCAGGGGCGCTCAGCTGGAGCCACTGATGGGTCCAGAGTCCAGTGGAAAGAGAGGTGTCAGGGAGATGAGGCCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp GCAGAGAAGCCACCACCCTGGCCTGGAAGTGGCTGCCCAAGCTGCTaGCTCTCCATGAGGGGGAGGCTGCTTTCAGGGTCAGCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: AEKPPPWPGSGCPSC*LSMRGRLLSGSAAL
Trigger: CAAGGCAGCTGACCCTGAAAGCAGCCTCCCCCTCATGGAGAGTCAGCAGCTTGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp CCTTTCTGCCTCCAGGGGCCAGCTGTCTGTTGGTCCACCTGTCTCTaGTCTCTCTGCCCATTGCGGGAGACGATGCCTGAGCCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: PFCLQGPAVCWSTCL*SLCPLRETMPEPAL
Trigger: GAGGGCTGGCTCAGGCATCGTCTCCCGCAATGGGCAGAGAGAGCAGAGACAGGTGGACCAACAGACAGCTGGCCCCTGGAGGCAGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp TCCCCTCAGCTGGTCTGCAGAGAAGCCACCACCCTGGCCTGGAAGTaGCTGCCCAAGCTGCTGACTCTCCATGAGGGGGAGGCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: SPQLVCREATTLAWK*LPKLLTLHEGEAAF
Trigger: GAAAGCAGCCTCCCCCTCATGGAGAGTCAGCAGCTTGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTCTGCAGACCAGCTGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CACACACACACACACACACACACACACACCATGCAAGGAGGGTCTTaGCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTMQGGS*PPASPSGWIRPSHA
Trigger: GGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp TCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGTaGGGCTGGGGGCCCTACATTCACGGTTCGGTTGGTGGCAAGGAG +
Preference number: 1 (lower is better)
Translates to: SSQLQTRVLLVLGQR*GWGPYIHGSVGGKE
Trigger: CTCCTTGCCACCAACCGAACCGTGAATGTAGGGCCCCCAGCCTCACCTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp ACACCTCTCTTTCCACTGGACTCTGGACCCATCAGTGGCTCCAGCTaGGCGCCCCTGCCCTGTCCTGGAAACTGTACCACCAGCCCCACC +
Preference number: 1 (lower is better)
Translates to: TPLFPLDSGPISGSS*APLPCPGNCTTSPT
Trigger: GGTGGGGCTGGTGGTACAGTTTCCAGGACAGGGCAGGGGCGCTCAGCTGGAGCCACTGATGGGTCCAGAGTCCAGTGGAAAGAGAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 90 bp GTCCCCACCTGGCACGAGCTGATTGTCATTCGGAGAAGCTCTAGGTaGGAGGCAGTGGCCCTTCCTCCACTCCCTCTGCTGGACCCAGAG +
Preference number: 1 (lower is better)
Translates to: VPTWHELIVIRRSSR*EAVALPPLPLLDPE
Trigger: CTCTGGGTCCAGCAGAGGGAGTGGAGGAAGGGCCACTGCCTCCCACCTAGAGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CAGGCCCAGGGCCTGGGCACCAGGAGTCATATCCTGGTCCCCACCTaGCACGAGCTGATTGTCATTCGGAGAAGCTCTAGGTGGGAGGCA +
Preference number: 1 (lower is better)
Translates to: QAQGLGTRSHILVPT*HELIVIRRSSRWEA
Trigger: TGCCTCCCACCTAGAGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGGTGCCCAGGCCCTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp GCCTGGGCACCAGGAGTCATATCCTGGTCCCCACCTGGCACGAGCTaGTTGTCATTCGGAGAAGCTCTAGGTGGGAGGCAGTGGCCCTTC +
Preference number: 1 (lower is better)
Translates to: AWAPGVISWSPPGTS*LSFGEALGGRQWPF
Trigger: GAAGGGCCACTGCCTCCCACCTAGAGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGGTGCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp CAGTTCCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTaGTGGCACAGGTGTCTTGGGGGAGGGGCAGCCTACCATGGACTG +
Preference number: 1 (lower is better)
Translates to: QFLRSRGQTPNPTRE*WHRCLGGGAAYHGL
Trigger: CAGTCCATGGTAGGCTGCCCCTCCCCCAAGACACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp CCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTaGGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGC +
Preference number: 1 (lower is better)
Translates to: PWEVDPRPLSSILSS*GAEDRHPILPGSDG
Trigger: GCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 90 bp TTCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTaGACGCAGCCAGACTGCTGGGGCACACTAAGGCCTTTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: FRVSCLVGILPGDGG*TQPDCWGTLRPFFL
Trigger: GAGGAAGAAAGGCCTTAGTGTGCCCCAGCAGTCTGGCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp TGCTGGACCCAGAGGGCAGTAGAGGGCCTTGGGAGGGCCTCAAGTTaGCAAGGAGGGCTCTGTCCGGAGAAGTTTCCTGAGTGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: CWTQRAVEGLGRASS*QGGLCPEKFPECSG
Trigger: CCCAGAACACTCAGGAAACTTCTCCGGACAGAGCCCTCCTTGTCAACTTGAGGCCCTCCCAAGGCCCTCTACTGCCCTCTGGGTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp GGAGGGCTCTGTCCGGAGAAGTTTCCTGAGTGTTCTGGGAGCTTCTaGATCAGCGTGGGGTGGACGTCAAAGGCTGTCCACCCAGGAGTC +
Preference number: 1 (lower is better)
Translates to: GGLCPEKFPECSGSF*ISVGWTSKAVHPGV
Trigger: GACTCCTGGGTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACTTCTCCGGACAGAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GTCCGGAGAAGTTTCCTGAGTGTTCTGGGAGCTTCTGCATCAGCGTaGGGTGGACGTCAAAGGCTGTCCACCCAGGAGTCCTCCCCTCAG +
Preference number: 1 (lower is better)
Translates to: VRRSFLSVLGASASA*GGRQRLSTQESSPQ
Trigger: CTGAGGGGAGGACTCCTGGGTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACTTCTCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp TTCCCTCCCCCACCTCTCCTGGTGACATTCAGTGACTCAGAGGCCTaGGGTCAGTTGGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: FPPPPLLVTFSDSEA*GQLGALGRFGIPRA
Trigger: TGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCCAACTGACCTCAGGCCTCTGAGTCACTGAATGTCACCAGGAGAGGTGGGGGAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp CAACCTGCCTCTCTTCTGCTGTGTCTTCACCACCGCCCTTGGGGCTaGCCGAGCACCTACAGGAAGGAGTCACCTTCTGAGAAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: QPASLLLCLHHRPWG*PSTYRKESPSEKGR
Trigger: TCTGCCCTTCTCAGAAGGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACACAGCAGAAGAGAGGCAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 90 bp CCCACAGAATCACCTGCCCACCCATCTCCAAGATCACTTGCCCACTaGCTCTCACCGAGTTGTCCAGGATGGAGCCAACTTTGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: PTESPAHPSPRSLAH*LSPSCPGWSQLWGR
Trigger: CCTGCCCCAAAGTTGGCTCCATCCTGGACAACTCGGTGAGAGGCAGTGGGCAAGTGATCTTGGAGATGGGTGGGCAGGTGATTCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp TGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGTCTGTTaGTCCACCTGTCTCTGCTCTCTCTGCCCATTGCGGGAGACGATG +
Preference number: 1 (lower is better)
Translates to: WKLEGPFCLQGPAVC*STCLCSLCPLRETM
Trigger: CATCGTCTCCCGCAATGGGCAGAGAGAGCAGAGACAGGTGGACCAACAGACAGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GAGAAGTTTCCTGAGTGTTCTGGGAGCTTCTGCATCAGCGTGGGGTaGACGTCAAAGGCTGTCCACCCAGGAGTCCTCCCCTCAGCTGGT +
Preference number: 1 (lower is better)
Translates to: EKFPECSGSFCISVG*TSKAVHPGVLPSAG
Trigger: ACCAGCTGAGGGGAGGACTCCTGGGTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp AAAGTCTCGCTAGGTCACAGGGCTCCTCCCCCGATCACTGAGCATTaGAACACTCCCCACCACATTCCAAACCTGGCTGTCCTGGCCTCC +
Preference number: 1 (lower is better)
Translates to: KVSLGHRAPPPITEH*NTPHHIPNLAVLAS
Trigger: GGAGGCCAGGACAGCCAGGTTTGGAATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGGGGGAGGAGCCCTGTGACCTAGCGAGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 90 bp AGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTaGAGGCAAGAGGTTTCTGCACCCCAGAGGTGCAGGGGAGCACAT +
Preference number: 1 (lower is better)
Translates to: SPHTSYGSHRGSTQI*RQEVSAPQRCRGAH
Trigger: ATGTGCTCCCCTGCACCTCTGGGGTGCAGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CACACCATGCAAGGAGGGTCTTGGCCTCCCGCCAGCCCCTCGGGGTaGATCAGACCCAGCCATGCCAAGAGATCACAAATTAAACAGAAC +
Preference number: 1 (lower is better)
Translates to: HTMQGGSWPPASPSG*IRPSHAKRSQIKQN
Trigger: GTTCTGTTTAATTTGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCATGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp GAGGGCCTCAAGTTGACAAGGAGGGCTCTGTCCGGAGAAGTTTCCTaGGTGTTCTGGGAGCTTCTGCATCAGCGTGGGGTGGACGTCAAA +
Preference number: 1 (lower is better)
Translates to: EGLKLTRRALSGEVS*VFWELLHQRGVDVK
Trigger: TTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACTTCTCCGGACAGAGCCCTCCTTGTCAACTTGAGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 90 bp CCCAGATGTAGGCAGTTGAGGCTCATGATGAGGTGGGGTGAGCTATaGAGGAGCCAGAACCCAGGAAGAGTCCCCACATCCATTCCTGGA +
Preference number: 1 (lower is better)
Translates to: PRCRQLRLMMRWGEL*RSQNPGRVPTSIPG
Trigger: TCCAGGAATGGATGTGGGGACTCTTCCTGGGTTCTGGCTCCTGCATAGCTCACCCCACCTCATCATGAGCCTCAACTGCCTACATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp GAAGAGTGGGCTTGGGCTGGGGACCCATCACTCAAGCATACAATCTaGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: EEWAWAGDPSLKHTI*KLEGPFCLQGPAVC
Trigger: ACAGACAGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGATGGGTCCCCAGCCCAAGCCCACTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CCACTGGGAAATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATaGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTC +
Preference number: 1 (lower is better)
Translates to: PLGNTCPGRQPTHFL*FPQRLHPNLEARGF
Trigger: GAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATTTCCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 90 bp CCCCGATCACTGAGCATTGAAACACTCCCCACCACATTCCAAACCTaGCTGTCCTGGCCTCCATCCATACACAGGGACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: PRSLSIETLPTTFQT*LSWPPSIHRDTHTH
Trigger: GTGTGTGTGTGTGTCCCTGTGTATGGATGGAGGCCAGGACAGCCAGGTTTGGAATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 90 bp CAGGTGTCTTGGGGGAGGGGCAGCCTACCATGGACTGAGCCTTCCTaGGGTAAGATGTGTGAGGAGAGAACTCTGTCCTCAATGATGATG +
Preference number: 1 (lower is better)
Translates to: QVSWGRGSLPWTEPS*GKMCEERTLSSMMM
Trigger: CATCATCATTGAGGACAGAGTTCTCTCCTCACACATCTTACCCCAGGAAGGCTCAGTCCATGGTAGGCTGCCCCTCCCCCAAGACACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 90 bp TCTCCGAAGGGCCAGTGCAAAGATGGTAACCAGCCAGTCTCCACCTaGTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGG +
Preference number: 1 (lower is better)
Translates to: SPKGQCKDGNQPVST*FELRKEQVGWNCSR
Trigger: CCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGCAGGTGGAGACTGGCTGGTTACCATCTTTGCACTGGCCCTTCGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 90 bp AGTACCTCAGGGTTCTGGTCACTGAGATGGAGCTGTGCTCAGGGTTaGGTAGTGGAACCCTCTAGAAGGGAATGCTGGATCACAGAGTGC +
Preference number: 1 (lower is better)
Translates to: STSGFWSLRWSCAQG*VVEPSRRECWITEC
Trigger: GCACTCTGTGATCCAGCATTCCCTTCTAGAGGGTTCCACTACTCAACCCTGAGCACAGCTCCATCTCAGTGACCAGAACCCTGAGGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 90 bp CACAAATTAAACAGAACAAAGCCCATACCAGAGTGCCTCTGGCCCTaGAGGCCTCATCTCCCTGACACCTCTCTTTCCACTGGACTCTGG +
Preference number: 1 (lower is better)
Translates to: HKLNRTKPIPECLWP*RPHLPDTSLSTGLW
Trigger: CCAGAGTCCAGTGGAAAGAGAGGTGTCAGGGAGATGAGGCCTGCAGGGCCAGAGGCACTCTGGTATGGGCTTTGTTCTGTTTAATTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp ACCTTTGTGCTTTTTGTTTTCTGTCCCTTCTCAAAGGGTCCACCTTaGCCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCA +
Preference number: 1 (lower is better)
Translates to: TFVLFVFCPFSKGPP*PSPAYCLSRVQSHP
Trigger: TGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGGTCAAGGTGGACCCTTTGAGAAGGGACAGAAAACAAAAAGCACAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 90 bp CACACTCATACAGCACTGTGCAACTTGCGCACGTGCCAGTCACATTaGGGTCTATGTAAATGGCACTTCCTGGAATTACACAGTGCACAG +
Preference number: 1 (lower is better)
Translates to: HTHTALCNLRTCQSH*GLCKWHFLELHSAQ
Trigger: CTGTGCACTGTGTAATTCCAGGAAGTGCCATTTACATAGACCTCAATGTGACTGGCACGTGCGCAAGTTGCACAGTGCTGTATGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGCCGGGGCGGAGAGACTaGTGTGAGGCTGGCCGGCCT +
Preference number: 2 (lower is better)
Translates to: SMERSLGLVGERTRRPQKPGRRD*CEAGRP
Trigger: AGGCCGGCCAGCCTCACATCAGTCTCTCCGCCCCGG...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGCGCGTCCTCGCGGGTaGAGGCGGAAAGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEARPRG*RRKAGA
Trigger: GGCCCCAGCTTTCCGCCTGCACCCGCGAGGACGCGC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCGGCTGTGCTGGGAGCTaGTCCAGTGTGGCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLGCAGS*SSVAGC
Trigger: GCAGCCGGCCACACTGGAGCAGCTCCCAGCACAGCC...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGACGGGCCCTAAGGCCTaGCGGGGCGCCGCGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRTGPKA*RGAACA
Trigger: AGCACACGCGGCGCCCCGCCAGGCCTTAGGGCCCGT...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCCCTCGCGGGGAGGCTaGAGCCTCCACTTCTGGAAT +
Preference number: 2 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGPSRGG*SLHFWN
Trigger: ATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCATGCAAGGAGGGTCTTaGCCTCCCGCCAGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTMQGGS*PPASPS
Trigger: CGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCAT...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCTCCAGAGGCCGTCCCTaGCCACAATGGCTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SGSAALWASFRVMVAGRSSRGRP*PQWLPE
Trigger: TTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGA...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCCAGGAGTCATATCCTaGTCCCCACCTGGCACGAGC +
Preference number: 2 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGPGVIS*SPPGTS
Trigger: GCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGTCACGGTTCGGTTGGTaGCAAGGAGCAGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: APFFLPAPNQGVVGPGAESRFGW*QGAGPG
Trigger: CCCTGGGCCTGCTCCTTGCCACCAACCGAACCGTGA...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGCTCTCTCTGCCCATTaGGGGAGACGATGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEALSAH*GRRCLS
Trigger: GCTCAGGCATCGTCTCCCGCAATGGGCAGAGAGAGC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCAGGTGGGGTGAGCTATaGAGGAGCCAGAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: SGSAALWASFRVMVAGRSRWGEL*RSQNPG
Trigger: TCCTGGGTTCTGGCTCCTGCATAGCTCACCCCACCT...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCAGCCGGTGTGCTGCTTaGCCCAGATGTAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: SGSAALWASFRVMVAGRSSRCAA*PRCRQL
Trigger: CAACTGCCTACATCTGGGGCAAGCAGCACACCGGCT...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGGATGGAGCCAACTTTaGGGCAGGTCAGACCTGCCC +
Preference number: 2 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAGWSQL*GRSDLP
Trigger: GGGCAGGTCTGACCTGCCCCAAAGTTGGCTCCATCC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCCCTGGGAAGGAACCATaGTCCTCTGCCTGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTPGKEP*SSACSP
Trigger: TGGGGAGCAGGCAGAGGACCATGGTTCCTTCCCAGG...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACACTTTCCACTGGACTCTaGACCCATCAGTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITLSTGL*THQWLQ
Trigger: CTGGAGCCACTGATGGGTCCAGAGTCCAGTGGAAAG...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGCCAGCCCCTCGGGGTaGATCAGACCCAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAASPSG*IRPSHA
Trigger: GGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCAGGGGCAGCCTACCATaGACTGAGCCTTCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTRGSLP*TEPSWG
Trigger: ACCCCAGGAAGGCTCAGTCCATGGTAGGCTGCCCCT...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCCTGGTGACATTCAGTaGCTCAGAGGCCTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGPGDIQ*LRGLRS
Trigger: TGACCTCAGGCCTCTGAGTCACTGAATGTCACCAGG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAAGCCCCACCCCTCCCTaGACCATTTGGCTGGCACCT +
Preference number: 2 (lower is better)
Translates to: ATASKLGLLVAQFQPALGSPTPP*TIWLAP
Trigger: AGGTGCCAGCCAAATGGTGCAGGGAGGGGTGGGGCT...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGCTCCCAGAAGACTGTaGGGCTGGACCCTCGCGGGG +
Preference number: 2 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLAPRRL*GWTLAG
Trigger: CCCCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGAGAAGCCACCACCCTaGCCTGGAAGTGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GSPREVWNPKGRLGFASLEKPPP*PGSGCP
Trigger: TGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGAGCTGATGGGGAGGTaGGACGGAGACTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAELMGR*DGDSAW
Trigger: CCAAGCAGAGTCTCCGTCCCACCTCCCCATCAGCTC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 90 bp ACTTGCCCACTGCCTCTCACCGAGTTGTCCAGGATGGAGCCAACTTaGGGGCAGGTCAGACCTGCCCCCTCACACCTGAGTAGACCGATG +
Preference number: 2 (lower is better)
Translates to: TCPLPLTELSRMEPT*GQVRPAPSHLSRPM
Trigger: CATCGGTCTACTCAGGTGTGAGGGGGCAGGTCTGACCTGCCCCAAAGTTGGCTCCATCCTGGACAACTCGGTGAGAGGCAGTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR TCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCTGCCCCCTCACACCTaGGTAGACCGATGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GSPREVWNPKGRLGFASLLPPHT*VDRCSL
Trigger: CAGGGAACATCGGTCTACTCAGGTGTGAGGGGGCAG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR TCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGGGGGGCTGTATTGCATaGTGGGGTGGGATGGGATGT +
Preference number: 2 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVGGCIA*WGGMGC
Trigger: ACATCCCATCCCACCCCATCATGCAATACAGCCCCC...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGTCCCCTCAGCTGGTCTaGAGAGAAGCCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: GSPREVWNPKGRLGFASLSPQLV*REATTL
Trigger: CAGGGTGGTGGCTTCTCTGCAGACCAGCTGAGGGGA...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCGTGGGACGGAGACTCTaGTTGGGGTGGGAGTATTAC +
Preference number: 2 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTVGRRL*LGWEYY
Trigger: GTAATACTCCCACCCCAAGCAGAGTCTCCGTCCCAC...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGACCAGCTGAGCGCCCCTaGCCTGTCCTGGAAACTGTA +
Preference number: 2 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRPAERP*PVLETV
Trigger: TACAGTTTCCAGGACAGGGCAGGGGCGCTCAGCTGG...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGAAACTTGGGCTCCCTaGAGTGAAGGTTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAETWAP*SEGWGL
Trigger: CAGCCCCCAACCTTCACTGCAGGGAGCCCAAGTTTC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 90 bp TGTCCCATCTGCAGCCGGTGTGCTGCTTGCCCCAGATGTAGGCAGTaGAGGCTCATGATGAGGTGGGGTGAGCTATGCAGGAGCCAGAAC +
Preference number: 2 (lower is better)
Translates to: CPICSRCAACPRCRQ*RLMMRWGELCRSQN
Trigger: GTTCTGGCTCCTGCATAGCTCACCCCACCTCATCATGAGCCTCAACTGCCTACATCTGGGGCAAGCAGCACACCGGCTGCAGATGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CAA 90 bp ACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTaGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: TASKLGLLVAQFQPA*GGGSQAPLIHPQFL
Trigger: CAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGAAGTGGAGTCCTCGATaGAAAGTGGCTGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEKWSPR*KVAEPS
Trigger: GGAAGGCTCAGCCACTTTTCATCGAGGACTCCACTT...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGGGCGCGTAAGGCTGTaGTGGGAGCTGCTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEGRVRL*WELLQC
Trigger: ACACTGGAGCAGCTCCCAGCACAGCCTTACGCGCCC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGGGGAGCACATCCCCTaGCCACAGAATCACCTGCCC +
Preference number: 2 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEGEHIP*PQNHLP
Trigger: GGGCAGGTGATTCTGTGGGCAGGGGATGTGCTCCCC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCAGCCAGTCTCCACCTaGTTTGAACTCAGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGQPVST*FELRKE
Trigger: CTCTTTCCTGAGTTCAAAGCAGGTGGAGACTGGCTG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCAACCTGCCTCTCTTCTaGTGTGTCTTCACCACCGCC +
Preference number: 2 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTANLPLF*CVFTTA
Trigger: GGCGGTGGTGAAGACACAGCAGAAGAGAGGCAGGTT...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCCCACACACTTCCTATaGTTCCCACAGAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRPTHFL*FPQRLH
Trigger: GTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAATACCAGAGTGCCTCTaGCCCTGCAGGCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: ATASKLGLLVAQFQPALGIPECL*PCRPHL
Trigger: GAGATGAGGCCTGCAGGGCCAGAGGCACTCTGGTAT...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGATGGTGAAGGGTCCTaGGCACTAGATCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: GSPREVWNPKGRLGFASLDGEGS*ALDQGN
Trigger: GTTCCCCTGATCTAGTGCTCAGGACCCTTCACCATC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGGCTTCTCTGAAGGGGTaGGGGGACTTTGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRASLKG*GDFGWK
Trigger: TTTCCAGCCAAAGTCCCCCCACCCCTTCAGAGAAGC...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTAGAAGACTGTGGGGCTaGACCCTCGCGGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSRRLWG*TLAGRL
Trigger: CAGCCTCCCCGCGAGGGTCCAGCCCCACAGTCTTCT...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGTCCCCAACCCAGCCTaGCAGTCCAGAGGCCGTCCC +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLVPNPA*QSRGRP
Trigger: GGGACGGCCTCTGGACTGCCAGGCTGGGTTGGGGAC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR TCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTTGGGCTCCCTGCAGTaGAGGTTGGGGGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRLGSLQ*RLGAEK
Trigger: TTTCTCAGCCCCCAACCTTCACTGCAGGGAGCCCAA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCGTCCCTGGCCACAATaGCTCCCAGAAGACTGTGGG +
Preference number: 2 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPARPWPQ*LPEDCG
Trigger: CCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGACGGAGACTCTGCTTaGGGTGGGAGTATTACAGTA +
Preference number: 2 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTADGDSA*GGSITV
Trigger: TACTGTAATACTCCCACCCCAAGCAGAGTCTCCGTC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGATGGACTGAGCCTTCCTaGGGTAAGATGTGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: ATASKLGLLVAQFQPALGWTEPS*GKMCEE
Trigger: CTCCTCACACATCTTACCCCAGGAAGGCTCAGTCCA...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCATGGCACAGGTGTCTTaGGGGAGGGGCAGCCTACCA +
Preference number: 2 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAMAQVS*GRGSLP
Trigger: TGGTAGGCTGCCCCTCCCCCAAGACACCTGTGCCAT...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTGAGGCAGGCGCAAGCTaGCATCCTGACACTTCCCCA +
Preference number: 2 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAEAGAS*HPDTSP
Trigger: TGGGGAAGTGTCAGGATGCCAGCTTGCGCCTGCCTC...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGACCGATCACTGAGCATTaGAACACTCCCCACCACATT +
Preference number: 2 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRPITEH*NTPHHI
Trigger: AATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGG...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGGTGTAGGCAGAGATTaGTGGGGGAGCATGGAGCGT +
Preference number: 2 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLGVGRD*WGSMER
Trigger: ACGCTCCATGCTCCCCCAGCAATCTCTGCCTACACC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGCCCACAGAATCACCTaGCCACCCATCTCCAAGATC +
Preference number: 2 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEAHRIT*PPISKI
Trigger: GATCTTGGAGATGGGTGGGCAGGTGATTCTGTGGGC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTATGGTCCACCTGTCTCTaGTCTCTCTGCCCATTGCGG +
Preference number: 2 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLWSTCL*SLCPLR
Trigger: CCGCAATGGGCAGAGAGAGCAGAGACAGGTGGACCA...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTGCTGGGTCTCCTCGTTaGTCAGTTCCAGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAAGSPR*SVPACL
Trigger: AAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGC...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCCGAGTTGTCCAGGATaGAGCCAACTTTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAPSCPG*SQLWGR
Trigger: CCTGCCCCAAAGTTGGCTCCATCCTGGACAACTCGG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGGGGTAGAATGGACCTaGGGCTCTCTCAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLGVEWT*GSLRPP
Trigger: AGGGGGCCTGAGAGAGCCCCAGGTCCATTCTACCCC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTATGGCTTCCAGGGTGTTaGGGTGGGGTGGACAGGTGC +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLWLPGC*GGVDRC
Trigger: GCACCTGTCCACCCCACCCCAACACCCTGGAAGCCA...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCACACCTCTCTTTCCACTaGACTCTGGACCCATCAGTG +
Preference number: 2 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAHLSFH*TLDPSV
Trigger: CACTGATGGGTCCAGAGTCCAGTGGAAAGAGAGGTG...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 90 bp GAGGTGGGGCTGCTCCCGCCTGGGATTTGTCCTGAGACACTGGTTTaGCTGACAAGCACATGGTTTCTCACGTCATCCTTAACAACCACC +
Preference number: 2 (lower is better)
Translates to: EVGLLPPGICPETLV*LTSTWFLTSSLTTT
Trigger: GGTGGTTGTTAAGGATGACGTGAGAAACCATGTGCTTGTCAGCAAAACCAGTGTCTCAGGACAAATCCCAGGCGGGAGCAGCCCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGGATGTGTGAGTGTGTaGTTATTGCGTCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAGCVSV*LLRPGK
Trigger: CTTCCCAGGACGCAATAATCACACACTCACACATCC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTATGGACGCAGCCAGACTaGTGGGGCACACTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLWTQPD*WGTLRP
Trigger: AGGCCTTAGTGTGCCCCAGCAGTCTGGCTGCGTCCA...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCCCTGCACCATTTGGCTaGCACCTACAAAGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAPAPFG*HLQREL
Trigger: CAGCTCCCTTTGTAGGTGCCAGCCAAATGGTGCAGG...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 90 bp CACCTTTGTGCTTTTTGTTTTCTGTCCCTTCTCAAAGGGTCCACCTaGACCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCC +
Preference number: 2 (lower is better)
Translates to: HLCAFCFLSLLKGST*TLSCLLPEQGAKPS
Trigger: GGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGGTCAAGGTGGACCCTTTGAGAAGGGACAGAAAACAAAAAGCACAAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGCTTTCAGGGTCAGCTaGCTTGTGGGCATCCTTCCG +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLAFRVS*LVGILP
Trigger: CGGAAGGATGCCCACAAGGCAGCTGACCCTGAAAGC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGTAGGCAGAGATTGCTaGGGGAGCATGGAGCGTAGC +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLVGRDC*GSMERS
Trigger: GCTACGCTCCATGCTCCCCCAGCAATCTCTGCCTAC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGGCTCCACCCAAATCTaGAGGCAAGAGGTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAGSTQI*RQEVSA
Trigger: TGCAGAAACCTCTTGCCTCCAGATTTGGGTGGAGCC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAAAGCTGGGGGTAGAATaGACCTGGGGCTCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLKLGVE*TWGSLR
Trigger: CCTGAGAGAGCCCCAGGTCCATTCTACCCCCAGCTT...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR TCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTTCCTCCCCCGATCACTaGGCATTGAAACACTCCCCA +
Preference number: 2 (lower is better)
Translates to: SSLTTTLAATASKLGLLVSSPDH*ALKHSP
Trigger: TGGGGAGTGTTTCAATGCTCAGTGATCGGGGGAGGA...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTCAATGATGATGGCCTaGGAAAGTCTCGCTAGGTCA +
Preference number: 2 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRSMMMA*ESLARS
Trigger: TGACCTAGCGAGACTTTCTCAGGCCATCATCATTGA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTATGTCTCTGCTCTCTCTaGCCATTGCGGGAGACGATG +
Preference number: 2 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLCLCSL*PLRETM
Trigger: CATCGTCTCCCGCAATGGGCAGAGAGAGCAGAGACA...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR GCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTGATCCCTATCCAACCTaGCTCTCTTCTGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: MVWMSHTTMVALCVDSLADPYPT*LSSAVS
Trigger: AGACACAGCAGAAGAGAGGCAGGTTGGATAGGGATC...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTAGACTCTGCTTGGGGTaGGAGTATTACAGTACCTTG +
Preference number: 2 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLARLCLG*EYYSTL
Trigger: CAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCGTAAGCACACTCTTATaGACAAGTGTACGCGCATGC +
Preference number: 2 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAVSTLL*TSVRAC
Trigger: GCATGCGCGTACACTTGTGCATAAGAGTGTGCTTAC...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCAGACACTGGTTTTGCTaGCAAGCACATGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: WHFLELHSAQPEHSSMAARHWFC*QAHGFS
Trigger: TGAGAAACCATGTGCTTGTCAGCAAAACCAGTGTCT...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATTGTGAATGGTGTGGATaGGCCATACCACAATGGTGG +
Preference number: 2 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNCEWCG*AIPQWW
Trigger: CCACCATTGTGGTATGGCTCATCCACACCATTCACA...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACTCCTGCCTACTGCCTaGGCAGGGTGCAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKLLPTA*AGCKAI
Trigger: GATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTGTGATTATTGCGTCCTaGGAAGGAACCATGGTCCTC +
Preference number: 2 (lower is better)
Translates to: SSLTTTLAATASKLGLLVVIIAS*EGTMVL
Trigger: GAGGACCATGGTTCCTTCCCAGGACGCAATAATCAC...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAACCTTGACCCTCTCCTaGCTACTGCCTGAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKTLTLS*LLPEQG
Trigger: ACCCTGCTCAGGCAGTAGGCAGGAGAGGGTCAAGGT...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAACCTCCCTGCACCATTTaGCTGGCACCTACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKPPCTI*LAPTKG
Trigger: TCCCTTTGTAGGTGCCAGCCAAATGGTGCAGGGAGG...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAACAAACCTGGCTGTCCTaGCCTCCATCCATACACAGG +
Preference number: 2 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKQTWLS*PPSIHR
Trigger: CCTGTGTATGGATGGAGGCCAGGACAGCCAGGTTTG...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATCTGTGTGGACAGTTTaGCTCCAGGGCACTGCCCAC +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKSVWTV*LQGTAH
Trigger: GTGGGCAGTGCCCTGGAGCCAAACTGTCCACACAGA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 90 bp CATGGAGGATATACAAAAGGATGTCCCCCTAAAGGACAACATGCTTaGAACCATGGCCTTGCTTTAAAGGACACACCCTCTCCCACAGGT +
Preference number: 2 (lower is better)
Translates to: HGGYTKGCPPKGQHA*NHGLALKDTPSPTG
Trigger: ACCTGTGGGAGAGGGTGTGTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCCTTTTGTATATCCTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACACGTGCCAGTCACATTaGGGTCTATGTAAATGGCAC +
Preference number: 2 (lower is better)
Translates to: GCPPKGQHALNHGLALKDTCQSH*GLCKWH
Trigger: GTGCCATTTACATAGACCTCAATGTGACTGGCACGT...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAACCACTGCTTCTAAGCTaGGTCTCCTCGTTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKPLLLS*VSSLLS
Trigger: ACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGG...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR GCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAATGCTGGATCACAGAGTaGTTGGTTTCATCCAACCCC +
Preference number: 2 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKCWITE*LVSSNP
Trigger: GGGGTTGGATGAAACCAAGCACTCTGTGATCCAGCA...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGCCATACCACAATGGTaGCCCTCTGTGTGGACAGTT +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKAIPQW*PSVWTV
Trigger: AACTGTCCACACAGAGGGCCACCATTGTGGTATGGC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR TCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATGGAGTGGCTTATGTaGATGGTGTGGATGAGCCAT +
Preference number: 2 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKMEWLM*MVWMSH
Trigger: ATGGCTCATCCACACCATTCACATAAGCCACTCCAT...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAAGTACCTCAGGGTTCTaGTCACTGAGATGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKSTSGF*SLRWSC
Trigger: ACAGCTCCATCTCAGTGACCAGAACCCTGAGGTACT...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACTTTCACAAGGCACTTTaGGATCTTAGAGTACCTCAG +
Preference number: 2 (lower is better)
Translates to: GCPPKGQHALNHGLALKDFHKAL*DLRVPQ
Trigger: CTGAGGTACTCTAAGATCCCAAAGTGCCTTGTGAAA...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATCTAGAAGGGAATGCTaGATCACAGAGTGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKSRREC*ITECLV
Trigger: AACCAAGCACTCTGTGATCCAGCATTCCCTTCTAGA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp GGGCCGCGGGTGGCGCGCGTCGGGCGCGTAAGGCTGTaGTGGGAGCTGCTCCAGTGTGGCCGGCTGCGGGTG +
Preference number: 3 (lower is better)
Translates to: GPRVARVGRVRL*WELLQCGRLRV
Trigger: CACCCGCAGCCGGCCACACTGGAGCAGCTCCCAGCACAGCCTTACGCGCCCGACGCGCGCCACCCGCGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp CCGCGGGTGGCGCGCGTCGGGCGCGTAAGGCTGTGCTaGGAGCTGCTCCAGTGTGGCCGGCTGCGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: PRVARVGRVRLC*ELLQCGRLRVG
Trigger: CCCCACCCGCAGCCGGCCACACTGGAGCAGCTCCCAGCACAGCCTTACGCGCCCGACGCGCGCCACCCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp AGGCCGTCCCTGGCCACAATGGCTCCCAGAAGACTGTaGGGCTGGACCCTCGCGGGGAGGCTGGAGCCTCCA +
Preference number: 3 (lower is better)
Translates to: RPSLATMAPRRL*GWTLAGRLEPP
Trigger: TGGAGGCTCCAGCCTCCCCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp CCAGCCTGGCAGTCCAGAGGCCGTCCCTGGCCACAATaGCTCCCAGAAGACTGTGGGGCTGGACCCTCGCGG +
Preference number: 3 (lower is better)
Translates to: PAWQSRGRPWPQ*LPEDCGAGPSR
Trigger: CCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGACTGCCAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp GAGGTGAGGCTGGGGGCCCTACATTCACGGTTCGGTTaGTGGCAAGGAGCAGGCCCAGGGCCTGGGCACCAG +
Preference number: 3 (lower is better)
Translates to: EVRLGALHSRFG*WQGAGPGPGHQ
Trigger: CTGGTGCCCAGGCCCTGGGCCTGCTCCTTGCCACCAACCGAACCGTGAATGTAGGGCCCCCAGCCTCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp GTCCCCAACCCAGCCTGGCAGTCCAGAGGCCGTCCCTaGCCACAATGGCTCCCAGAAGACTGTGGGGCTGGA +
Preference number: 3 (lower is better)
Translates to: VPNPAWQSRGRP*PQWLPEDCGAG
Trigger: TCCAGCCCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGACTGCCAGGCTGGGTTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp AGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTaGACGCAGCCAGACTGCTGGGGCACACTAAGGCCT +
Preference number: 3 (lower is better)
Translates to: SCLVGILPGDGG*TQPDCWGTLRP
Trigger: AGGCCTTAGTGTGCCCCAGCAGTCTGGCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp ATGAGGGGGAGGCTGCTTTCAGGGTCAGCTGCCTTGTaGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGC +
Preference number: 3 (lower is better)
Translates to: MRGRLLSGSAAL*ASFRVMVAGRS
Trigger: GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGAAAGCAGCCTCCCCCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp ACACACACACACACACACACCATGCAAGGAGGGTCTTaGCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCC +
Preference number: 3 (lower is better)
Translates to: THTHTHTMQGGS*PPASPSGWIRP
Trigger: GGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCATGGTGTGTGTGTGTGTGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAGGACGGAGACTCTGCTaGGGGTGGGAGTATTACAGT +
Preference number: 3 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITGRRLC*GWEYYS
Trigger: ACTGTAATACTCCCACCCCAAGCAGAGTCTCCGTCC...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp AGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTaGTGGCACAGGTGTCTTGGGGGAGGGGCAGCCTAC +
Preference number: 3 (lower is better)
Translates to: RSRGQTPNPTRE*WHRCLGGGAAY
Trigger: GTAGGCTGCCCCTCCCCCAAGACACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp GAGCCAGAACCCAGGAAGAGTCCCCACATCCATTCCTaGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: EPEPRKSPHIHS*SRAAARAGVRA
Trigger: TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTTCCTGGGTTCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp CCTCAGCTGGTCTGCAGAGAAGCCACCACCCTGGCCTaGAAGTGGCTGCCCAAGCTGCTGACTCTCCATGAG +
Preference number: 3 (lower is better)
Translates to: PQLVCREATTLA*KWLPKLLTLHE
Trigger: CTCATGGAGAGTCAGCAGCTTGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTCTGCAGACCAGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp CCTGAGTGTTCTGGGAGCTTCTGCATCAGCGTGGGGTaGACGTCAAAGGCTGTCCACCCAGGAGTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: PECSGSFCISVG*TSKAVHPGVLP
Trigger: GGGGAGGACTCCTGGGTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCCCCTCCCTGCACCATTaGGCTGGCACCTACAAAGGG +
Preference number: 3 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAPSLHH*AGTYKG
Trigger: CCCTTTGTAGGTGCCAGCCAAATGGTGCAGGGAGGG...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp GTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTaGGGAGCCGAGGACAGACACCCAATCCTACCAGGG +
Preference number: 3 (lower is better)
Translates to: VDPRPLSSILSS*GAEDRHPILPG
Trigger: CCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp GTGCAGGGGAGCACATCCCCTGCCCACAGAATCACCTaGCCACCCATCTCCAAGATCACTTGCCCACTGCCT +
Preference number: 3 (lower is better)
Translates to: VQGSTSPAHRIT*PPISKITCPLP
Trigger: AGGCAGTGGGCAAGTGATCTTGGAGATGGGTGGGCAGGTGATTCTGTGGGCAGGGGATGTGCTCCCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 72 bp ACACACACACACACACACACACACACACACACACCATaGAAGGAGGGTCTTGGCCTCCCGCCAGCCCCTCGG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHTP*KEGLGLPPAPR
Trigger: CCGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCCTGGATGTCTTGGCTaGCTCTCTGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEPGCLG*LSVTQG
Trigger: TCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp GGCCTGGGCACCAGGAGTCATATCCTGGTCCCCACCTaGCACGAGCTGATTGTCATTCGGAGAAGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: GLGTRSHILVPT*HELIVIRRSSR
Trigger: CCTAGAGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGGTGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp TCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGGTaGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: SPRCSVPACLGR*IPGPSHPSSVP
Trigger: AGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTaGCTCCAGGGCACTGCCCACCACACTTATGGCACC +
Preference number: 3 (lower is better)
Translates to: AIPQWWPSVWTV*LQGTAHHTYGT
Trigger: GGTGCCATAAGTGTGGTGGGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCAGTCTCCACCTGCTTaGAACTCAGGAAAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRQSPPA*NSGKSR
Trigger: CCTGCTCTTTCCTGAGTTCAAAGCAGGTGGAGACTG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGAGACATCTGGGGAATaGATGGGCCAAGCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAETSGE*MGQAEV
Trigger: AACCTCTGCTTGGCCCATCAATTCCCCAGATGTCTC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp CCAGGAGTCATATCCTGGTCCCCACCTGGCACGAGCTaGTTGTCATTCGGAGAAGCTCTAGGTGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PGVISWSPPGTS*LSFGEALGGRQ
Trigger: CTGCCTCCCACCTAGAGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp ATGCCCACCAGGGCTGGTCCCTGGAGTTCAGAAGACTaGGCAAACCAGGCCTCTGTGAGGAGCTGGGAAATG +
Preference number: 3 (lower is better)
Translates to: MPTRAGPWSSED*ANQASVRSWEM
Trigger: CATTTCCCAGCTCCTCACAGAGGCCTGGTTTGCTCAGTCTTCTGAACTCCAGGGACCAGCCCTGGTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp TCTCTTCTGCTGTGTCTTCACCACCGCCCTTGGGGCTaGCCGAGCACCTACAGGAAGGAGTCACCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: SLLLCLHHRPWG*PSTYRKESPSE
Trigger: CTCAGAAGGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACACAGCAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp TGTCCTGGAAACTGTACCACCAGCCCCACCCCTCCCTaGACCATTTGGCTGGCACCTACAAAGGGAGCTGAT +
Preference number: 3 (lower is better)
Translates to: CPGNCTTSPTPP*TIWLAPTKGAD
Trigger: ATCAGCTCCCTTTGTAGGTGCCAGCCAAATGGTGCAGGGAGGGGTGGGGCTGGTGGTACAGTTTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp AGTTTCCTGAGTGTTCTGGGAGCTTCTGCATCAGCGTaGGGTGGACGTCAAAGGCTGTCCACCCAGGAGTCC +
Preference number: 3 (lower is better)
Translates to: SFLSVLGASASA*GGRQRLSTQES
Trigger: GGACTCCTGGGTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp AGAGGCCTGAGGTCAGTTGGGAGCCCTAGGGAGGTTTaGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTG +
Preference number: 3 (lower is better)
Translates to: RGLRSVGSPREV*NPKGRLGFASL
Trigger: CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCCAACTGACCTCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp GCTGATGGGGAGGTGGGACGGAGACTCTGCTTGGGGTaGGAGTATTACAGTACCTTGGGCCAACGTTCTAGG +
Preference number: 3 (lower is better)
Translates to: ADGEVGRRLCLG*EYYSTLGQRSR
Trigger: CCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCTCCGTCCCACCTCCCCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp TGGGGGAGGGGCAGCCTACCATGGACTGAGCCTTCCTaGGGTAAGATGTGTGAGGAGAGAACTCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: WGRGSLPWTEPS*GKMCEERTLSS
Trigger: TGAGGACAGAGTTCTCTCCTCACACATCTTACCCCAGGAAGGCTCAGTCCATGGTAGGCTGCCCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGAGGTGTAGGCAGAGATaGCTGGGGGAGCATGGAGCG +
Preference number: 3 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTERCRQR*LGEHGA
Trigger: CGCTCCATGCTCCCCCAGCAATCTCTGCCTACACCT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGAGGATGGAGCCAACTTaGGGGCAGGTCAGACCTGCC +
Preference number: 3 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTERMEPT*GQVRPA
Trigger: GGCAGGTCTGACCTGCCCCAAAGTTGGCTCCATCCT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp GATGGCTACTTCCCTTCCGAGACCCGATCTAATCATTaGCAGTGGCTTCCAGGGTGTTGGGGTGGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: DGYFPSETRSNH*QWLPGCWGGVD
Trigger: GTCCACCCCACCCCAACACCCTGGAAGCCACTGTCAATGATTAGATCGGGTCTCGGAAGGGAAGTAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp CTAGGTCACAGGGCTCCTCCCCCGATCACTGAGCATTaGAACACTCCCCACCACATTCCAAACCTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: LGHRAPPPITEH*NTPHHIPNLAV
Trigger: GACAGCCAGGTTTGGAATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGGGGGAGGAGCCCTGTGACCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp TGTCCGGAGAAGTTTCCTGAGTGTTCTGGGAGCTTCTaGATCAGCGTGGGGTGGACGTCAAAGGCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: CPEKFPECSGSF*ISVGWTSKAVH
Trigger: GTGGACAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGCTCCCAGAACACTCAGGAAACTTCTCCGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 72 bp TTCCCCACTCCCAAGTGTCCAGATCCCTATCCAACCTaGCTCTCTTCTGCTGTGTCTTCACCACCGCCCTTG +
Preference number: 3 (lower is better)
Translates to: FPTPKCPDPYPT*LSSAVSSPPPL
Trigger: CAAGGGCGGTGGTGAAGACACAGCAGAAGAGAGGCAGGTTGGATAGGGATCTGGACACTTGGGAGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp GCTTGGGCTGGGGACCCATCACTCAAGCATACAATCTaGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCA +
Preference number: 3 (lower is better)
Translates to: AWAGDPSLKHTI*KLEGPFCLQGP
Trigger: TGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGATGGGTCCCCAGCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp TGCCCCAGATGTAGGCAGTTGAGGCTCATGATGAGGTaGGGTGAGCTATGCAGGAGCCAGAACCCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: CPRCRQLRLMMR*GELCRSQNPGR
Trigger: TCTTCCTGGGTTCTGGCTCCTGCATAGCTCACCCCACCTCATCATGAGCCTCAACTGCCTACATCTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCTGCCTCTCACCGAGTaGTCCAGGATGGAGCCAACT +
Preference number: 3 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPALPLTE*SRMEPT
Trigger: AGTTGGCTCCATCCTGGACAACTCGGTGAGAGGCAG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGAGGGAAGAGTGGGCTaGGGCTGGGGACCCATCACT +
Preference number: 3 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLEGRVG*GWGPIT
Trigger: AGTGATGGGTCCCCAGCCCAAGCCCACTCTTCCCTC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp AGTCTCGCTAGGTCACAGGGCTCCTCCCCCGATCACTaGGCATTGAAACACTCCCCACCACATTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: SLARSQGSSPDH*ALKHSPPHSKP
Trigger: AGGTTTGGAATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGGGGGAGGAGCCCTGTGACCTAGCGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATaGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: NTCPGRQPTHFL*FPQRLHPNLEA
Trigger: TGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR CCA 72 bp GAAACACTCCCCACCACATTCCAAACCTGGCTGTCCTaGCCTCCATCCATACACAGGGACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: ETLPTTFQTWLS*PPSIHRDTHTH
Trigger: GTGTGTGTGTGTGTCCCTGTGTATGGATGGAGGCCAGGACAGCCAGGTTTGGAATGTGGTGGGGAGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTATCAGGAAAGAGCAGGTaGGCTGGAACTGCAGTAGGC +
Preference number: 3 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLSGKSR*AGTAVG
Trigger: GCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGA...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTACTCCAAACCAGGGTGTaGTTGGTCCTGGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLLQTRV*LVLGQR
Trigger: CCTCTGCCCCAGGACCAACAACACCCTGGTTTGGAG...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp GGGAAGGCATGTGTTGGGGTGAGCAGACCCTGCATCTaGGTCAGTGACATAGGTTGTTGTGATGGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: GKACVGVSRPCI*VSDIGCCDGEV
Trigger: CACTTCCCCATCACAACAACCTATGTCACTGACTCAGATGCAGGGTCTGCTCACCCCAACACATGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR TCA 72 bp GGGTTCTGGTCACTGAGATGGAGCTGTGCTCAGGGTTaGGTAGTGGAACCCTCTAGAAGGGAATGCTGGATC +
Preference number: 3 (lower is better)
Translates to: GFWSLRWSCAQG*VVEPSRRECWI
Trigger: GATCCAGCATTCCCTTCTAGAGGGTTCCACTACTCAACCCTGAGCACAGCTCCATCTCAGTGACCAGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp GGCCAGTGCAAAGATGGTAACCAGCCAGTCTCCACCTaGTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: GQCKDGNQPVST*FELRKEQVGWN
Trigger: GTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGCAGGTGGAGACTGGCTGGTTACCATCTTTGCACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR GCA 72 bp GGGGGTGTGTGTTTGAAAACTCAGCCGCCTTCTCAATaGTGGATCTCCCACTTCCAAAGGCGTTGGAAACAG +
Preference number: 3 (lower is better)
Translates to: GGVCLKTQPPSQ*WISHFQRRWKQ
Trigger: CTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCTGAGTTTTCAAACACACACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp CTGGGAAGGGCTTGGGGAGGGGTGTTACATTCTGTTTaGCATGTAAACATTCTTAGGTGGCTTCCCGAGGGA +
Preference number: 3 (lower is better)
Translates to: LGRAWGGVLHSV*HVNILRWLPEG
Trigger: TCCCTCGGGAAGCCACCTAAGAATGTTTACATGCCAAACAGAATGTAACACCCCTCCCCAAGCCCTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTGAGTATTACAGTACCTaGGGCCAACGTTCTAGGGGG +
Preference number: 3 (lower is better)
Translates to: SSLTTTLAATASKLGLLVEYYST*GQRSRG
Trigger: CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTC...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATATGGAGAAGGTGCTCTaGGCCCAGACATCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNMEKVL*AQTSSK
Trigger: TTTTGAGGATGTCTGGGCCAAGAGCACCTTCTCCAT...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp CCAAGCAGAGGTTACAGGGAGAGAGGGGTAGAAGAGTaGAGCTGGGATGAGAGTAGCTACATAGGAAACTAC +
Preference number: 3 (lower is better)
Translates to: PSRGYRERGVEE*SWDESSYIGNY
Trigger: GTAGTTTCCTATGTAGCTACTCTCATCCCAGCTTCACTCTTCTACCCCTCTCTCCCTGTAACCTCTGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CCA 72 bp AGTAAAACTTTGTTAAAGCCCCCTCCAACTTCCCACTaGGAAATACTTGCCCAGGAAGGCAGCCCACACACT +
Preference number: 3 (lower is better)
Translates to: SKTLLKPPPTSH*EILAQEGSPHT
Trigger: AGTGTGTGGGCTGCCTTCCTGGGCAAGTATTTCCCAGTGGGAAGTTGGAGGGGGCTTTAACAAAGTTTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
3UTR-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACTCAAAGGGTCCACCTaGACCCTCTCCTGCCTACTG +
Preference number: 3 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKLKGST*TLSCLL
Trigger: CAGTAGGCAGGAGAGGGTCAAGGTGGACCCTTTGAG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp ACAGCACTGTGCAACTTGCGCACGTGCCAGTCACATTaGGGTCTATGTAAATGGCACTTCCTGGAATTACAC +
Preference number: 3 (lower is better)
Translates to: TALCNLRTCQSH*GLCKWHFLELH
Trigger: GTGTAATTCCAGGAAGTGCCATTTACATAGACCTCAATGTGACTGGCACGTGCGCAAGTTGCACAGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAACAGCACTGTGCAACTaGCGCACGTGCCAGTCACAT +
Preference number: 3 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKTALCN*RTCQSH
Trigger: ATGTGACTGGCACGTGCGCAAGTTGCACAGTGCTGT...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR TCA 72 bp AGCTGGGATGAGAGTAGCTACATAGGAAACTACCAATaGCTGCATAGACATCTTTCTGGCTCCCTAACACAC +
Preference number: 3 (lower is better)
Translates to: SWDESSYIGNYQ*LHRHLSGSLTH
Trigger: GTGTGTTAGGGAGCCAGAAAGATGTCTATGCAGTCATTGGTAGTTTCCTATGTAGCTACTCTCATCCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR GCA 72 bp CACATGCACAAACGCTCATTCGTAAGCACACTCTTATaGACAAGTGTACGCGCATGCACACAAGCAAACATA +
Preference number: 3 (lower is better)
Translates to: HMHKRSFVSTLL*TSVRACTQANI
Trigger: TATGTTTGCTTGTGTGCATGCGCGTACACTTGTGCATAAGAGTGTGCTTACGAATGAGCGTTTGTGCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCACGGGGCTGGCCCGTCTaGAAGGGCCGGGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGARGWPV*KGRAIG
Trigger: CCCAATGGCCCGGCCCTTGCAGACGGGCCAGCCCCG...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGGGTGGGGGACAAGGTaGGGACTGGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAGWGTR*GLGPSP
Trigger: GGGGCTGGGCCCCAGTCCCCACCTTGTCCCCCACCC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCATGGGGCCGCTCATGCTaGGGAGTGAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAWGRSC*GVRAAR
Trigger: CCTGGCTGCCCTCACTCCTCAGCATGAGCGGCCCCA...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCACGCCATGGGATCTGCTaGCGGGCTGCTGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGARHGIC*RAAGLQ
Trigger: TTGCAGCCCAGCAGCCCGCCAGCAGATCCCATGGCG...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGAGAAGCCACCACCCTaGCCTGGAAGTGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAEKPPP*PGSGCP
Trigger: TGGGCAGCCACTTCCAGGCCAGGGTGGTGGCTTCTC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGAGGGCATCGGTGCCTaGCTTCTCCCAGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAEGIGA*LLPVKG
Trigger: GCCTTTGACTGGGAGAAGGCAGGCACCGATGCCCTC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCATCCAGAGGCCGTCCCTaGCCACAATGGCTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGASRGRP*PQWLPE
Trigger: TTCTGGGAGCCATTGTGGCCAGGGACGGCCTCTGGA...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAAGTGACTCAGAGGCCTaGGGTCAGTTGGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGASDSEA*GQLGAL
Trigger: TAGGGCTCCCAACTGACCTCAGGCCTCTGAGTCACT...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGGTGTAGGCAGAGATTaGTGGGGGAGCATGGAGCGT +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAGVGRD*WGSMER
Trigger: ACGCTCCATGCTCCCCCAGCAATCTCTGCCTACACC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAAGCCGGTGTGCTGCTTaGCCCAGATGTAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGASRCAA*PRCRQL
Trigger: CAACTGCCTACATCTGGGGCAAGCAGCACACCGGCT...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGCTTCTGCATCAGCGTaGGGTGGACGTCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAASASA*GGRQRL
Trigger: CAGCCTTTGACGTCCACCCCACGCTGATGCAGAAGC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAAGCCCTAGGGAGGTTTaGAATCCCAAGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGASPREV*NPKGRL
Trigger: CAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCT...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGGGGAATCCGGCTCCTaGTGGCGGCTGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSGESGS*WRLPSR
Trigger: GCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGGAGGACGAGGCCCCTaGGGCCAGCCGCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSGGRGP*GQPQQQ
Trigger: CTGCTGTTGCGGCTGGCCTCAGGGGCCTCGTCCTCC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGCCGCGCCATGGGATCTaGTGGCGGGCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKPRHGI*WRAAGL
Trigger: CAGCCCAGCAGCCCGCCAGCAGATCCCATGGCGCGG...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGGGACGCGCTGGCATTaGGCGCGGCGGATGTGGACG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKGTRWH*ARRMWT
Trigger: CGTCCACATCCGCCGCGCGCAATGCCAGCGCGTCCC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCGCGCCCGCACAGGGCTaGTCTCAGCCGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTAPAQG*SQPSGC
Trigger: GCAGCCGCTCGGCTGAGAGCAGCCCTGTGCGGGCGC...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCACGCACTGGGGAGCTaGGGACCCCCATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGHALGS*GPPCLG
Trigger: GCCGAGGCATGGGGGTCCCCAGCTCCCCAGTGCGTG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCGCCCTCCTCGGGCAGTaGCCGCAGCTCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLALLGQ*PQLLGL
Trigger: GAGCCCGAGGAGCTGCGGCCACTGCCCGAGGAGGGC...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGACATGACGTTGAGGTaGGTTTTCTCCGCAATGTGC +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGADMTLR*VFSAMC
Trigger: GCACATTGCGGAGAAAACCCACCTCAACGTCATGTC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCCCTCCCGCTCTTCCTaGGCAAGGCCGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGPSRSS*ARPLPA
Trigger: AGCCGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGACGGGCCCTAAGGCCTaGCGGGGCGCCGCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAETGPKA*RGAACA
Trigger: AGCACACGCGGCGCCCCGCCAGGCCTTAGGGCCCGT...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCCGGGGCGGAGAGACTaGTGTGAGGCTGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEPGRRD*CEAGRP
Trigger: AGGCCGGCCAGCCTCACATCAGTCTCTCCGCCCCGG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGGGCATCCTTCCGGGTaGTGGTGGCTGGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSGHPSG*WWLDAA
Trigger: GGCTGCGTCCAGCCACCATCACCCGGAAGGATGCCC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACACACCGCCCTTGGGGCTaGCCGAGCACCTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITHRPWG*PSTYRK
Trigger: CTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTG...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGCGGCCGAGCCCGCTTaGTCCACCGCTCTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAAAEPA*STALWP
Trigger: CGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCCTGGGCAAGGCCGCTaGCGGCTCAGAGGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRPGQGR*RLRGGR
Trigger: ACGCCCGCCTCTGAGCCGGCAGCGGCCTTGCCCAGG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGCCCTCCGCGCCTCCTaGCCGGCCTTTGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKALRAS*PAFGCC
Trigger: GCAACAACCAAAGGCCGGGCAGGAGGCGCGGAGGGC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCGCGTCCTCGCGGGTaGAGGCGGAAAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRARPRG*RRKAGA
Trigger: GGCCCCAGCTTTCCGCCTGCACCCGCGAGGACGCGC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAGCCGCACATCCCCCGTaGTGTTGGTGTACTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITAAHPP*CWCTAG
Trigger: CCCGGCAGTACACCAACACCACGGGGGATGTGCGGC...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGGGTGGGGGACAAGGTaGGGACTGGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAGWGTR*GLGPSP
Trigger: GGGGCTGGGCCCCAGTCCCCACCTTGTCCCCCACCC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCGTCCATGCGGCCACTaGCCTGTCGGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSRPCGH*PVGQRG
Trigger: GCCACGCTGACCGACAGGCCAGTGGCCGCATGGACG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGCCCTCCTCGGGCAGTaGCCGCAGCTCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAALLGQ*PQLLGL
Trigger: GAGCCCGAGGAGCTGCGGCCACTGCCCGAGGAGGGC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGTGGGGTGGCAGGGGCTaGGGCGGCAAATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKWGGRG*GGKCCR
Trigger: CCTGCAGCATTTGCCGCCCCAGCCCCTGCCACCCCA...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGCTGTTCTCAAACACTaGCATGATCAACTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAAVLKH*HDQLVV
Trigger: GACTACCAGTTGATCATGTCAGTGTTTGAGAACAGC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGCGGCCGCTAGGCACTaGATCCGCCAGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAAAARH*IRQPEG
Trigger: TCCCTCTGGCTGGCGGATGCAGTGCCTAGCGGCCGC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGGCTGGGGCGGCAAATaGTGCAGGTCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAGWGGK*CRSSSA
Trigger: GGCGGAGGAGGACCTGCAGCATTTGCCGCCCCAGCC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCGCGCCAGGTCCTGCTaGGGCCGAGCCCGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRRARSC*GRARLL
Trigger: GAGCAAGCGGGCTCGGCCGCAGCAGGACCTGGCGCG...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAAGCCCCACCCCTCCCTaGACCATTTGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITSPTPP*TIWLAP
Trigger: AGGTGCCAGCCAAATGGTGCAGGGAGGGGTGGGGCT...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGACCACAGGTCGTCGTaGCGGCCCATCTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSDHRSS*RPISRF
Trigger: GAACCGGGAGATGGGCCGCCACGACGACCTGTGGTC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCTGGGGTGGCAGGGGCTaGGGCGGCAAATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTWGGRG*GGKCCR
Trigger: CCTGCAGCATTTGCCGCCCCAGCCCCTGCCACCCCA...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGAGTGCAGGGGTGAGTaGGAAGGGCTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKECRGE*EGLPGV
Trigger: CACGCCTGGCAGCCCTTCCCACTCACCCCTGCACTC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGTCAGATACGTCCAGCTaGCTGCCCGTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGSDTSS*LPVGWG
Trigger: GCCCCAGCCCACGGGCAGCCAGCTGGACGTATCTGA...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGCTCCCAGAAGACTGTaGGGCTGGACCCTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAAPRRL*GWTLAG
Trigger: CCCCGCGAGGGTCCAGCCCCACAGTCTTCTGGGAGC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGTCCCCAACCCAGCCTaGCAGTCCAGAGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAVPNPA*QSRGRP
Trigger: GGGACGGCCTCTGGACTGCCAGGCTGGGTTGGGGAC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGGGAAATGGGGAGCCTaGGGCACAGCCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSGKWGA*GTAPLL
Trigger: GAGGAGAGGGGCTGTGCCCCAGGCTCCCCATTTCCC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCACTTGGGCTGCTGGGCTaGCTCCACCTTGAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRALGLLG*LHLEGH
Trigger: GTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAG...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCATGTGGTGCTCAGCGTaGAGGTGCCTCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLMWCSA*RCLAAG
Trigger: GCCAGCCGCGAGGCACCTTCACGCTGAGCACCACAT...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGAGCGGCTGCGCTGAATaGGGGAACCGGAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEESGCAE*GNRRSP
Trigger: CGGGCTCCTCCGGTTCCCTCATTCAGCGCAGCCGCT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGGCCGAGCGGCTGCGCTaGATGAGGGAACCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEAERLR*MREPEE
Trigger: CTCCTCCGGTTCCCTCATTCAGCGCAGCCGCTCGGC...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCCCGTGGTGCCCGATGTaGTGGGCTCAGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAPWCPM*WAQPLE
Trigger: CTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGG...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCTGGGGCGGCAAATGCTaGAGGTCCTCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTWGGKC*RSSSAS
Trigger: GCTGGCGGAGGAGGACCTGCAGCATTTGCCGCCCCA...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCCTGGCTCCGGTCAGTaGTCCTCTCACTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSPGSGQ*SSHSPH
Trigger: GTGAGGGGAGTGAGAGGAGCACTGACCGGAGCCAGG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCTCCTTCTGATCGTCTaGCAGCAGCGTGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSLLLIV*QQRGRG
Trigger: GCCCCGTCCACGCTGCTGGCAGACGATCAGAAGGAG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGTCAGAGGCACGGCGCTaGTCCTCACTGGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGSEARR*SSLEED
Trigger: GTCCTCCTCCAGTGAGGAGCAGCGCCGTGCCTCTGA...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCACAACAGGCATGGGCATaGGGAGGCCAATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAQQAWA*GGQWGG
Trigger: CCCGCCCCATTGGCCTCCGCATGCCCATGCCTGTTG...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGATCTGCTGGCGGGCTaGTGGGCTGCAACAGGCATG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKDLLAG*WAATGM
Trigger: CATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCCTGTGCCCCCTTCGTaGACGGTGTGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRPVPPS*TVWLGR
Trigger: CCTCCCCAGCCACACCGTGCACGAAGGGGGCACAGG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGCGGGCCCACACCTGCTaGAGCTGGGACCGCGAGATG +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEERAHTC*SWDREM
Trigger: CATCTCGCGGTCCCAGCTGCAGCAGGTGTGGGCCCG...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGAACCGGGCCCACACCTaGTGCAGCTGGGACCGCGAG +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVNRAHT*CSWDRE
Trigger: CTCGCGGTCCCAGCTGCAGCAGGTGTGGGCCCGGTT...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAGGGCCACATTCTCCCTaGTCAGCAGGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITGPHSP*SAGPWP
Trigger: AGGCCATGGACCTGCTGACCAGGGAGAATGTGGCCC...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCAGGTCCCCAGGCACTaGCGTCACATTGACCACCCC +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGQVPRH*RHIDHP
Trigger: GGGGTGGTCAATGTGACGCCAGTGCCTGGGGACCTG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCTCGCCCGTCCGCCGTaGACAGCCTTTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSLARPP*TAFLTQ
Trigger: CTGAGTCAGAAAGGCTGTCCACGGCGGACGGGCGAG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGGCCTGTCGGTCAGCGTaGCCTGTGTCCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGACRSA*PVSTDS
Trigger: GCTGTCAGTGGACACAGGCCACGCTGACCGACAGGC...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCTGGTGCCCGATGTGCTaGGCTCAGCCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLWCPMC*AQPLEG
Trigger: TCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCA...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCGGGCTCCTCATCCGTaGTGCCCGATGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAERAPHP*CPMCWA
Trigger: AGCCCAGCACATCGGGCACCACGGATGAGGAGCCCG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGAAGGGCTGCCAGGCGTaGGGGGCTGTGACGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVKGCQA*GAVTSR
Trigger: CCGAGACGTCACAGCCCCCCACGCCTGGCAGCCCTT...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCGGCGTCTGGGGGAGATaGTGGCCACTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSGVWGR*WPLSQG
Trigger: GCCCTGAGAAAGTGGCCACCATCTCCCCCAGACGCC...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGGGGTAGAATGGACCTaGGGCTCTCTCAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKGVEWT*GSLRPP
Trigger: AGGGGGCCTGAGAGAGCCCCAGGTCCATTCTACCCC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCTTGGGCTGCTGGGCTaGCTCCACCTTGAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVLGLLG*LHLEGH
Trigger: GTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGATGTGGTGCTCAGCGTaGAGGTGCCTCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEMWCSA*RCLAAG
Trigger: GCCAGCCGCGAGGCACCTTCACGCTGAGCACCACAT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGGGAGGGCCTCAAGTTaGCAAGGAGGGCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEGRASS*QGGLCP
Trigger: CGGACAGAGCCCTCCTTGTCAACTTGAGGCCCTCCC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGAGGACCTGCTTGGGCTaGTGGGCTGACTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGRTCLG*WADSTL
Trigger: CAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCT...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGTCTGCCGGGTGTTCTaGTGGGGCGGGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAVCRVF*WGGVEV
Trigger: CACCTCTACCCCGCCCCAGCAGAACACCCGGCAGAC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCCTCCTCAGAGCCCGTaGCTGAGAGGGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEPPQSP*LRGSQR
Trigger: CCTCTGAGACCCTCTCAGGCACGGGCTCTGAGGAGG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGGCTGTGCTGGGAGCTaGTCCAGTGTGGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLGCAGS*SSVAGC
Trigger: GCAGCCGGCCACACTGGAGCAGCTCCCAGCACAGCC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGGGCGCGTAAGGCTGTaGTGGGAGCTGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAGRVRL*WELLQC
Trigger: ACACTGGAGCAGCTCCCAGCACAGCCTTACGCGCCC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCGCTGGGCTCAGCCCCTaGAGGGAAGTCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLAGLSP*REVLEL
Trigger: GAGCTCAAGGACTTCCCTCCAGGGGCTGAGCCCAGC...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTGGTGCCCGATGTGCTaGGCTCAGCCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVWCPMC*AQPLEG
Trigger: TCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGAAGGGCTGCCAGGCGTaGGGGGCTGTGACGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRKGCQA*GAVTSR
Trigger: CCGAGACGTCACAGCCCCCCACGCCTGGCAGCCCTT...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCAAGGGCCGGGCCATTaGGCAGTGAGTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGQGPGH*AVSLWP
Trigger: TGGCCACAAACTCACTGCCCAATGGCCCGGCCCTTG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCACACTTTCTCAGGGCTTaGCTCCAGCGGGGACACCGG +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAHFLRA*LQRGHR
Trigger: CCGGTGTCCCCGCTGGAGCCAAGCCCTGAGAAAGTG...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGCTCCACTCCCTCTGCTaGACCCAGAGGGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGLHSLC*TQRAVE
Trigger: CTCTACTGCCCTCTGGGTCCAGCAGAGGGAGTGGAG...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGCCAGCCCCTCGGGGTaGATCAGACCCAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGASPSG*IRPSHA
Trigger: GGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCGGCCACCTCCATCTTaGGGACCTGCTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVRPPPS*GPAWAA
Trigger: AGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAGAAGAGGTGGAACTCTaGCGGCATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITEEVEL*RHVLQQ
Trigger: CTGCTGAAGCACATGCCGTCAGAGTTCCACCTCTTC...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCGTGGACAGCCTTTCTaGCTCAGGGCTGTTCACCCT +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSRGQPF*LRAVHP
Trigger: AGGGTGAACAGCCCTGAGTCAGAAAGGCTGTCCACG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCTGCTCCACAGAGGCTaGCACGTCCATGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRLLHRG*HVHAAT
Trigger: AGTGGCCGCATGGACGTGTCAGCCTCTGTGGAGCAG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCCTGCTCCACAGAGGCTaGCACGTCCATGCGGCCACT +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTALLHRG*HVHAAT
Trigger: AGTGGCCGCATGGACGTGTCAGCCTCTGTGGAGCAG...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGCTTGGGCTCAGACTTaGGGACAGAGGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEAWAQT*GQRTGC
Trigger: GCACCCTGTCCTCTGTCCTCAAGTCTGAGCCCAAGC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGTTGGTTGTTGCGCGCTaGGCCTGGAGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGLVVAR*AWSFPL
Trigger: CAGAGGGAAACTCCAGGCTCAGCGCGCAACAACCAA...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCCTCCTGCCTACTGCCTaGGCAGGGTGCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTLLPTA*AGCKAI
Trigger: GATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAG...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCATCTACCTGCTCTGTaGCCGCTGCGGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRHLPAL*PLRLRL
Trigger: CAGCCGCAGCCGCAGCGGGCACAGAGCAGGTAGATG...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGTGGTGTTGGTGTACTaGCGGGCCAGCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRVVLVY*RASPKS
Trigger: GGACTTCGGGCTGGCCCGGCAGTACACCAACACCAC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGAACATGGCTGCCGTCTaGCGGGTGTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRNMAAV*RVFCWG
Trigger: GCCCCAGCAGAACACCCGGCAGACGGCAGCCATGTT...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGAACATGGCTGCCGTCTaGCGGGTGTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEENMAAV*RVFCWG
Trigger: GCCCCAGCAGAACACCCGGCAGACGGCAGCCATGTT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGAGGCTGACACGTCCATaGGGCCACTGGCCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEERLTRP*GHWPVG
Trigger: ACCGACAGGCCAGTGGCCGCATGGACGTGTCAGCCT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGGGCGGGGTCCCGAGTaGAGGGGTGAGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEGRGPE*RGEWEG
Trigger: CCCTTCCCACTCACCCCTGCACTCGGGACCCCGCCC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGTCTCACTCCCCTCACTaGTGGAGCCACTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAESHSPH*WSHYEA
Trigger: GGCCTCGTAGTGGCTCCAGCAGTGAGGGGAGTGAGA...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGAACAGCAGGCGGCCCTaGCTCTTCTCCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAENSRRP*LFSITS
Trigger: GCTGGTGATGGAGAAGAGGCAGGGCCGCCTGCTGTT...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGCTCCTGGTGGCGGCTaGCCTCCCGCTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLAPGGG*PPALPG
Trigger: CCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGATGGCTGTGTCCAATaGTGGGGCCGCGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRDGCVQ*WGRAMG
Trigger: TCCCATGGCGCGGCCCCAGCATTGGACACAGCCATC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGTCCCCTCAGCTGGTCTaGAGAGAAGCCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAESPQLV*REATTL
Trigger: CAGGGTGGTGGCTTCTCTGCAGACCAGCTGAGGGGA...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGAAGGTGCCTCGCGGCTaGCTACGGCGCAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEKVPRG*LRRRSA
Trigger: GGCCGACCTGCGCCGTAGCCAGCCGCGAGGCACCTT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGGCCGCACATCCCCCGTaGTGTTGGTGTACTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRAAHPP*CWCTAG
Trigger: CCCGGCAGTACACCAACACCACGGGGGATGTGCGGC...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGTGCCGGGTGTTCTGCTaGGGCGGGGTAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLCRVFC*GGVEVL
Trigger: GAGCACCTCTACCCCGCCCCAGCAGAACACCCGGCA...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGGCCTGTCGGTCAGCGTaGCCTGTGTCCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEACRSA*PVSTDS
Trigger: GCTGTCAGTGGACACAGGCCACGCTGACCGACAGGC...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGGCTGGGCTCAGCCCCTaGAGGGAAGTCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVAGLSP*REVLEL
Trigger: GAGCTCAAGGACTTCCCTCCAGGGGCTGAGCCCAGC...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCGTCTGCCAGCAGCGTaGACGGGGCACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQERLPAA*TGHPPG
Trigger: GCCAGGAGGGTGCCCCGTCCACGCTGCTGGCAGACG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGTGGAGGCCCGGCCCCTaGACTCCTTCTGATCGTCTG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRWRPGP*TPSDRL
Trigger: CAGACGATCAGAAGGAGTCCAGGGGCCGGGCCTCCA...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCCAAGCACCAGCGTTTTaGAGCCCTCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSQAPAF*SPPQAP
Trigger: TGGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTG...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGAGAGGACAGGGTGCCTaGCTCAGATACGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKRGQGA*LRYVQL
Trigger: CAGCTGGACGTATCTGAGCCAGGCACCCTGTCCTCT...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGAGCCTGGCATAGCATaGCGTCTGGGGGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEEPGIA*RLGEMV
Trigger: CACCATCTCCCCCAGACGCCATGCTATGCCAGGCTC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCCTGGGGCGAGAGCCTaGCATAGCATGGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLPGARA*HSMASG
Trigger: CCCAGACGCCATGCTATGCCAGGCTCTCGCCCCAGG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGGCTGTGTCCAATGCTaGGGCCGCGCCATGGGATCT +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRGCVQC*GRAMGS
Trigger: AGATCCCATGGCGCGGCCCCAGCATTGGACACAGCC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGGCCAGGAGGTTGTTTaGGGCGGAGGTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRGQEVV*GGGQQQ
Trigger: CTGCTGCTGACCTCCGCCCCAAACAACCTCCTGGCC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGGGATGGAGCCAACTTTaGGGCAGGTCAGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEGWSQL*GRSDLP
Trigger: GGGCAGGTCTGACCTGCCCCAAAGTTGGCTCCATCC...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCAGCAGCTGCACGGGCTaGGGTCAGGGCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLSSCTG*GQGKKE
Trigger: TTCCTTCTTGCCCTGACCCCAGCCCGTGCAGCTGCT...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCCGGAGAAGCTCTAGGTaGGAGGCAGTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLRRSSR*EAVALP
Trigger: AGGAAGGGCCACTGCCTCCCACCTAGAGCTTCTCCG...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGTCACGGTTCGGTTGGTaGCAAGGAGCAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRSRFGW*QGAGPG
Trigger: CCCTGGGCCTGCTCCTTGCCACCAACCGAACCGTGA...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGCATTCACGGTTCGGTTaGTGGCAAGGAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKHSRFG*WQGAGP
Trigger: TGGGCCTGCTCCTTGCCACCAACCGAACCGTGAATG...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGGTGTTGGGGTGGGGTaGACAGGTGCAGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRGVGVG*TGAGWA
Trigger: TGCCCATCCTGCACCTGTCCACCCCACCCCAACACC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGCCTGCCTTGGGAGGTaGATCCCAGGCCCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAACLGR*IPGPSH
Trigger: ATGAGAGGGGCCTGGGATCCACCTCCCAAGGCAGGC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCACTGGAGGGAAGTCCTTaGGCTCCGTCTCCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRALEGSP*APSPCR
Trigger: TCGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAG...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCCCTCCGGACCCTGTTaGGCAACCGCGCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEPSGPC*ATAPVL
Trigger: GAGAACGGGCGCGGTTGCTCAACAGGGTCCGGAGGG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGGTGTCCGCCGGGCCTaGCCTGAGGGGGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAGVRRA*PEGAIY
Trigger: GTAGATGGCCCCCTCAGGGCAGGCCCGGCGGACACC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGACTCCAAGATCTGCTTaGCCAGCCGCAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKTPRSA*PAAMWC
Trigger: GCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGT...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGAGGTGGAGGGCAGCCTaGCCATGGCAAAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGRWRAA*PWQSLK
Trigger: CTTCAAACTTTGCCATGGGCAGGCTGCCCTCCACCT...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGACAGGAGGGCATCGGTaGCTGCCTTCTCCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAETGGHR*LPSPSQ
Trigger: TTGACTGGGAGAAGGCAGGCACCGATGCCCTCCTGT...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCACCCCAAACATGGCTaGCGTCTGCCGGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVHPKHG*RLPGVL
Trigger: CAGAACACCCGGCAGACGGCAGCCATGTTTGGGGTG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGAGGCTGACACGTCCATaGGGCCACTGGCCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRRLTRP*GHWPVG
Trigger: ACCGACAGGCCAGTGGCCGCATGGACGTGTCAGCCT...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAGCTCCTCATCCGTGGTaGCCGATGTGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRAPHPW*PMCWAQ
Trigger: CTGAGCCCAGCACATCGGGCACCACGGATGAGGAGC...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCGGGCGGGGTCCCGAGTaGAGGGGTGAGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAGRGPE*RGEWEG
Trigger: CCCTTCCCACTCACCCCTGCACTCGGGACCCCGCCC...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCAAGGCAACTGCCGCTaGAGCCTCCTCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRQGNCR*SLLLLF
Trigger: GAAGAGGAGGAGGAGGCTGCAGCGGCAGTTGCCTTG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCCGCGCCAGGTCCTaGTGCGGCCGAGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGASRARS*CGRARL
Trigger: CAAGCGGGCTCGGCCGCAGCAGGACCTGGCGCGGCT...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGTGGTCCACCTGTCTCTaGTCTCTCTGCCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEWSTCL*SLCPLR
Trigger: CCGCAATGGGCAGAGAGAGCAGAGACAGGTGGACCA...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGTGGACGCAGCCAGACTaGTGGGGCACACTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRWTQPD*WGTLRP
Trigger: AGGCCTTAGTGTGCCCCAGCAGTCTGGCTGCGTCCA...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCCAGGGGAACAGAGGTaGTGGCTGACATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVPGEQR*WLTWAG
Trigger: TCCTGCCCATGTCAGCCAGCACCTCTGTTCCCCTGG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCAAGGTGCCTCGCGGCTaGCTACGGCGCAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAKVPRG*LRRRSA
Trigger: GGCCGACCTGCGCCGTAGCCAGCCGCGAGGCACCTT...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCTCGAGGCTGGCAATGTaGTCCAGGAAGAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSSRLAM*SRKRWN
Trigger: GTTCCACCTCTTCCTGGACCACATTGCCAGCCTCGA...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGCGTCCATGCGGCCACTaGCCTGTCGGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRRPCGH*PVGQRG
Trigger: GCCACGCTGACCGACAGGCCAGTGGCCGCATGGACG...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGTCTCTGTGGGCCTGTaGGGTCCGACTCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLVSVGL*GPTLSV
Trigger: GACGGAGAGAGTCGGACCCCACAGGCCCACAGAGAC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGACGGGGCACCCTCCTaGCTCCGGTCAGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEDGAPS*LRSVLL
Trigger: GAGGAGCACTGACCGGAGCCAGGAGGGTGCCCCGTC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGAGCAGTGGCCGACCCTaGGGGCGTCTGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQESSGRP*GRLQLE
Trigger: CTCCAGCTGCAGACGCCCCCAGGGTCGGCCACTGCT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCCCCACATCCATTCCTaGAGTAGAGCAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEPHIHS*SRAAAR
Trigger: CCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAACGCAGCCAGACTGCTaGGGCACACTAAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRATQPDC*GTLRPF
Trigger: GAAAGGCCTTAGTGTGCCCCAGCAGTCTGGCTGCGT...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGATCCCAAGGGCAGACTaGGTTTTGCGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SMERSLGLVGERTRRPQKIPRAD*VLRLCQ
Trigger: CTGGCAGAGACGCAAAACCCAGTCTGCCCTTGGGAT...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCTCCAACTGTCTCTGTaGGCCTGTGGGGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVLQLSL*ACGVRL
Trigger: GAGTCGGACCCCACAGGCCCACAGAGACAGTTGGAG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACACCACTGCTTCTAAGCTaGGTCTCCTCGTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITPLLLS*VSSLLS
Trigger: ACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGG...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGGCTCGCCCCCAGCGCTaGACTCCTCAGACCGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEARPQR*TPQTAR
Trigger: CCTTGCGGTCTGAGGAGTTCAGCGCTGGGGGCGAGC...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGAGGCATGTGTTGGGGTaGGCAGACCCTGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRRHVLG*ADPASE
Trigger: CTCAGATGCAGGGTCTGCTCACCCCAACACATGCCT...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTCCATCCTCAGTTCCTaGGGAGCCGAGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVSILSS*GAEDRH
Trigger: GTGTCTGTCCTCGGCTCCTCAGGAACTGAGGATGGA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGTGGTGTTGGTGTACTaGCGGGCCAGCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAVVLVY*RASPKS
Trigger: GGACTTCGGGCTGGCCCGGCAGTACACCAACACCAC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCTCCCCCAAGGCAACTaGCGCTGCAGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQELPQGN*RCSLLL
Trigger: GAGGAGGAGGCTGCAGCGGCAGTTGCCTTGGGGGAG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTATACGTCCAGCTGGCTaGCCGTGGGCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAIRPAG*PWAGAA
Trigger: AGCGGCCCCAGCCCACGGGCAGCCAGCTGGACGTAT...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGGGCGGGCTGCTGGGCTaGAACAGGCATGGGCATGCG +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEGGLLG*NRHGHA
Trigger: CGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCC...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGACCAGCTGAGCGCCCCTaGCCTGTCCTGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGPAERP*PVLETV
Trigger: TACAGTTTCCAGGACAGGGCAGGGGCGCTCAGCTGG...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCAACCTGCCTCTCTTCTaGTGTGTCTTCACCACCGCC +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTNLPLF*CVFTTA
Trigger: GGCGGTGGTGAAGACACAGCAGAAGAGAGGCAGGTT...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACATGCTGGATCACAGAGTaGTTGGTTTCATCCAACCCC +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITCWITE*LVSSNP
Trigger: GGGGTTGGATGAAACCAAGCACTCTGTGATCCAGCA...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGGCTCAGTGCGGCGTTaGGTGACCCGCTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAGSVRR*VTRSLR
Trigger: CCGGAGGGAGCGGGTCACCCAACGCCGCACTGAGCC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGTGGTCAGCAGGTCCATaGCCTCGTAGATCTCACCAA +
Preference number: 4 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGWSAGP*PRRSHQ
Trigger: TTGGTGAGATCTACGAGGCCATGGACCTGCTGACCA...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCAGTGGATGGCCTCGATaGACTCCAAGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SGSAALWASFRVMVAGRSSGWPR*TPRSAC
Trigger: GCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACT...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTGCCGGGTGTTCTGCTaGGGCGGGGTAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRCRVFC*GGVEVL
Trigger: GAGCACCTCTACCCCGCCCCAGCAGAACACCCGGCA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCACAGGTCCCCAGGCACTaGCGTCACATTGACCACCCC +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAQVPRH*RHIDHP
Trigger: GGGGTGGTCAATGTGACGCCAGTGCCTGGGGACCTG...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGCGCAGAGAACGGACTaGGGTTGTGGGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAAQRTD*GCGGVW
Trigger: CCAGACTCCCCCACAACCCCAGTCCGTTCTCTGCGC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGAGTGCAGGGGTGAGTaGGAAGGGCTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAECRGE*EGLPGV
Trigger: CACGCCTGGCAGCCCTTCCCACTCACCCCTGCACTC...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGAACACCTGTCTCTGTaGGCCTGTGGGGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLEHLSL*ACGVRL
Trigger: GAGTCGGACCCCACAGGCCCACAGAGACAGGTGTTC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGTGCTCCACCGCTCTTTaGCCGACAGTGAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLCSTAL*PTVSLR
Trigger: CCTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCA...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGAATCCGGCTCCTGGTaGCGGCTGCCCTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAESGSW*RLPSRS
Trigger: AGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGCATGCGGAGGCCAATaGGGCGGGGAATCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAACGGQ*GGESGS
Trigger: GGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATGC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGGGGGCGTCTGCAGCTaGAGCCTGCTGGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLGGVCS*SLLVMA
Trigger: AGCCATCACCAGCAGGCTCCAGCTGCAGACGCCCCC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGGAGGTCAGCAGCAGTaGCCGACCCTGGGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAGGQQQ*PTLGAS
Trigger: AGACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGCGGGCGTCATTATCTaGCCCCAGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAAGVII*PQPGPP
Trigger: CGGAGGGCCGGGCTGGGGCCAGATAATGACGCCCGC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGACCCTGGCCTGGAAGTaGCTGCCCAAGCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLTLAWK*LPKLLT
Trigger: AGTCAGCAGCTTGGGCAGCCACTTCCAGGCCAGGGT...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGTGCATCAGCGTGGGGTaGACGTCAAAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRCISVG*TSKAVH
Trigger: GTGGACAGCCTTTGACGTCCACCCCACGCTGATGCA...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCCAGGAGTCATATCCTaGTCCCCACCTGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLPGVIS*SPPGTS
Trigger: GCTCGTGCCAGGTGGGGACCAGGATATGACTCCTGG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGCTCCGTCTCCAGCGTaGAGGAGGAGAACACGGAGG +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAAPSPA*RRRTRR
Trigger: CCTCCGTGTTCTCCTCCTCCACGCTGGAGACGGAGC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGAGCTGATGGGGAGGTaGGACGGAGACTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGELMGR*DGDSAW
Trigger: CCAAGCAGAGTCTCCGTCCCACCTCCCCATCAGCTC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGATACCAGAGTGCCTCTaGCCCTGCAGGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEIPECL*PCRPHL
Trigger: GAGATGAGGCCTGCAGGGCCAGAGGCACTCTGGTAT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGATGGTGGCCCTCTGTGTaGACAGTTTGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGWWPSV*TVWLQG
Trigger: GCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCA...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 72 bp TGCAGCCGGTGTGCTGCTTGCCCCAGATGTAGGCAGTaGAGGCTCATGATGAGGTGGGGTGAGCTATGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRCAACPRCRQ*RLMMRWGELCR
Trigger: CCTGCATAGCTCACCCCACCTCATCATGAGCCTCAACTGCCTACATCTGGGGCAAGCAGCACACCGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTCCCTTGCAACTTCTTaGGCACGGCCACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVSLATS*ARPPPS
Trigger: AGATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGAAGAGGTGGAACTCTaGCGGCATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVREEVEL*RHVLQQ
Trigger: CTGCTGAAGCACATGCCGTCAGAGTTCCACCTCTTC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCGGAGTTTGTTCCGGTTaGCATCTGTCTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLGVCSG*HLSPPR
Trigger: TCTGGGAGGAGACAGATGTCAACCGGAACAAACTCC...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCCCCTGGACTCCTTCTaGTCGTCTGCCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLPLDSF*SSASSV
Trigger: CACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGGAGCACCGAGGGCATaGGTCTGTGGTTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAGAPRA*VCGCQQ
Trigger: CTGCTGGCAACCACAGACTCATGCCCTCGGTGCTCC...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGATTGGGCTCCCTGCAGTaGAGGTTGGGGGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRLGSLQ*RLGAEK
Trigger: TTTCTCAGCCCCCAACCTTCACTGCAGGGAGCCCAA...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCACATGGTCCTTCCCTTaGAACTTCTTGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTTWSFP*NFLSTA
Trigger: GGCCGTGCTCAAGAAGTTGCAAGGGAAGGACCATGT...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGACTCCAAGATCTGCTTaGCCAGCCGCAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEETPRSA*PAAMWC
Trigger: GCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACATGCCCCTCTCCTTCATaGTGTTCTCAAACACTGACA +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITCPSPS*CSQTLT
Trigger: TGTCAGTGTTTGAGAACAGCATGAAGGAGAGGGGCA...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGGTCTGCCGGGTGTTCTaGTGGGGCGGGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEVCRVF*WGGVEV
Trigger: CACCTCTACCCCGCCCCAGCAGAACACCCGGCAGAC...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGGGGCAGAATTGGGGGTaGATTCTCCTGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEGQNWG*ILLVTQ
Trigger: CTGAGTGACCAGGAGAATGCACCCCCAATTCTGCCC...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCCCGTGGTGCCCGATGTaGTGGGCTCAGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAPWCPM*WAQPLE
Trigger: CTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGG...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTTGGGGCGGCAAATGCTaGAGGTCCTCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAWGGKC*RSSSAS
Trigger: GCTGGCGGAGGAGGACCTGCAGCATTTGCCGCCCCA...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTGGTGAGCAGCATGTaGGAGAAGCCCACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEVVSSM*EKPTLR
Trigger: CCGGAGGGTGGGCTTCTCGCACATGCTGCTCACCAC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGACCCTGGGGGCGTCTaGAGCTGGAGCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGADPGGV*SWSLLV
Trigger: CACCAGCAGGCTCCAGCTGCAGACGCCCCCAGGGTC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCCGGCCTTTGGTTGTTaGGCGCTGAGCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRPAFGC*ALSLEF
Trigger: AAACTCCAGGCTCAGCGCGCAACAACCAAAGGCCGG...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGCTGGCTGTCCCATCTaGAGCCGGTGTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEAGCPI*SRCAAC
Trigger: GCAAGCAGCACACCGGCTGCAGATGGGACAGCCAGC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGGCTTTCAGGGTCAGCTaGCTTGTGGGCATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRAFRVS*LVGILP
Trigger: CGGAAGGATGCCCACAAGGCAGCTGACCCTGAAAGC...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGCTGGGTCTCCTCGTTaGTCAGTTCCAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGAGSPR*SVPACL
Trigger: AAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAACCTTGACCCTCTCCTaGCTACTGCCTGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRTLTLS*LLPEQG
Trigger: ACCCTGCTCAGGCAGTAGGCAGGAGAGGGTCAAGGT...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCTGGTCAGCAGGTCCATaGCCTCGTAGATCTCACCAA +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTWSAGP*PRRSHQ
Trigger: TTGGTGAGATCTACGAGGCCATGGACCTGCTGACCA...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCATCCCCCGTGGTGTTaGTGTACTGCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAHPPWC*CTAGPA
Trigger: GGCTGGCCCGGCAGTACACCAACACCACGGGGGATG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTCGAGGCTGGCAATGTaGTCCAGGAAGAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVSRLAM*SRKRWN
Trigger: GTTCCACCTCTTCCTGGACCACATTGCCAGCCTCGA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGCGCAGAGAACGGACTaGGGTTGTGGGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEAQRTD*GCGGVW
Trigger: CCAGACTCCCCCACAACCCCAGTCCGTTCTCTGCGC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGGTAGGCAGAGATTGCTaGGGGAGCATGGAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLVGRDC*GSMERS
Trigger: GCTACGCTCCATGCTCCCCCAGCAATCTCTGCCTAC...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGAGAAGACTGTGGGGCTaGACCCTCGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTERRLWG*TLAGRL
Trigger: CAGCCTCCCCGCGAGGGTCCAGCCCCACAGTCTTCT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCCGAGTTGTCCAGGATaGAGCCAACTTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLPSCPG*SQLWGR
Trigger: CCTGCCCCAAAGTTGGCTCCATCCTGGACAACTCGG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGCCACCACCCTGGCCTaGAAGTGGCTGCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAATTLA*KWLPKL
Trigger: CAGCTTGGGCAGCCACTTCCAGGCCAGGGTGGTGGC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAATCCTGGTCCCCACCTaGCACGAGCTGATTGTCATT +
Preference number: 4 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAILVPT*HELIVI
Trigger: AATGACAATCAGCTCGTGCCAGGTGGGGACCAGGAT...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGAGCAGGCCCAGGGCCTaGGCACCAGGAGTCATATCC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQESRPRA*APGVIS
Trigger: GGATATGACTCCTGGTGCCCAGGCCCTGGGCCTGCT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCATGCCCACCAGGGCTaGTCCCTGGAGTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLHAHQG*SLEFRR
Trigger: TCTTCTGAACTCCAGGGACCAGCCCTGGTGGGCATG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAACAGAGGCTTGGGTTTaGGGAGATTCAAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITTEAWV*GDSKVS
Trigger: GCTCACTTTTGAATCTCCCCAAACCCAAGCCTCTGT...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGCGGCCACCTCCATCTTaGGGACCTGCTTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTERPPPS*GPAWAA
Trigger: AGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCG...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGACTTGTGGGCATTGACTaGGGCATAGCGAACCGTTCC +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRLVGID*GIANRS
Trigger: GGAACGGTTCGCTATGCCTCAGTCAATGCCCACAAG...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCACTGGAGGGAAGTCCTTaGGCTCCGTCTCCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWALEGSP*APSPCR
Trigger: TCGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAG...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCCCCATTCAGCCCTaGCAGGGCGAGGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGASPIQP*QGEAVL
Trigger: GAGAACGGCCTCGCCCTGTCAGGGCTGAATGGGGCT...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTCTCAGAGCCCGTGCCTaGGAGGGTCTCAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSLRARA*EGLRGT
Trigger: CGTGCCTCTGAGACCCTCTCAGGCACGGGCTCTGAG...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCTGCCCCCTCACACCTaGGTAGACCGATGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQELPPHT*VDRCSL
Trigger: CAGGGAACATCGGTCTACTCAGGTGTGAGGGGGCAG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGCAGAGGCCATGCAGTaGCTGGGAAGGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLAEAMQ*LGRAWG
Trigger: TCCCCAAGCCCTTCCCAGTCACTGCATGGCCTCTGC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCGGGGAAAGGAGTGTGTaGCTATGGAGTGGCTTATGT +
Preference number: 4 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTGERSV*LWSGLC
Trigger: ACATAAGCCACTCCATAGTCACACACTCCTTTCCCC...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGATGCCCACACTGCTGCTaGCTTATGGAGCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGCPHCC*LMEQMV
Trigger: CACCATCTGCTCCATAAGTCAGCAGCAGTGTGGGCA...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGGCAGGATGTCGGCCTaGTCCCCTCCCCCACTCATG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSGRMSA*SPPPLM
Trigger: CATGAGTGGGGGAGGGGAGCAGGCCGACATCCTGCC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAAACTCTGACGGCATGTaGTTCAGCAGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRNSDGM*FSSIRC
Trigger: GCACCGGATGCTGCTGAAGCACATGCCGTCAGAGTT...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGAGGGCATCGGTGCCTaGCTTCTCCCAGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGEGIGA*LLPVKG
Trigger: GCCTTTGACTGGGAGAAGGCAGGCACCGATGCCCTC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCCAAACATGGCTaGCGTCTGCCGGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLHPKHG*RLPGVL
Trigger: CAGAACACCCGGCAGACGGCAGCCATGTTTGGGGTG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGCTCCTCATCCGTGGTaGCCGATGTGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLAPHPW*PMCWAQ
Trigger: CTGAGCCCAGCACATCGGGCACCACGGATGAGGAGC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGGGGAGCACATCCCCTaGCCACAGAATCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLGEHIP*PQNHLP
Trigger: GGGCAGGTGATTCTGTGGGCAGGGGATGTGCTCCCC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGCATTGCGGGAGACGATaGCTGAGCCAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEHCGRR*LSQPSL
Trigger: GAGGGAGGGCTGGCTCAGGCATCGTCTCCCGCAATG...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGTGGTCCAGGAAGAGGTaGAACTCTGACGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRWSRKR*NSDGMC
Trigger: GCACATGCCGTCAGAGTTCCACCTCTTCCTGGACCA...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGCCTCCCGGGCAGAATTaGGGGTGCATTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGPPGQN*GCILLV
Trigger: GACCAGGAGAATGCACCCCCAATTCTGCCCGGGAGG...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGGAGCCAGTGGGACCTaGGGGGTGGTGAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSGASGT*GVVSSM
Trigger: CATGCTGCTCACCACCCCCCAGGTCCCACTGGCTCC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGGGCTGCAACAGGCATaGGCATGCGGAGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAGLQQA*ACGGQW
Trigger: CCATTGGCCTCCGCATGCCCATGCCTGTTGCAGCCC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCTCCTGCCCGGCCTTTaGTTGTTGCGCGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPALLPGL*LLRAEP
Trigger: AGGCTCAGCGCGCAACAACCAAAGGCCGGGCAGGAG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCCCTCGCGGGGAGGCTaGAGCCTCCACTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAPSRGG*SLHFWN
Trigger: ATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCCCACACACTTCCTATaGTTCCCACAGAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRPTHFL*FPQRLH
Trigger: GTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGG...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGAGGCTCATGATGAGGTaGGGTGAGCTATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLRLMMR*GELCRS
Trigger: GCTCCTGCATAGCTCACCCCACCTCATCATGAGCCT...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGTGGCTTCCAGGGTGTTaGGGTGGGGTGGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEWLPGC*GGVDRC
Trigger: GCACCTGTCCACCCCACCCCAACACCCTGGAAGCCA...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGAGGGGCAGCCTACCATaGACTGAGCCTTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGRGSLP*TEPSWG
Trigger: ACCCCAGGAAGGCTCAGTCCATGGTAGGCTGCCCCT...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGACTGCTGCTGACTTATaGAGCAGATGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEETAADL*SRWWAG
Trigger: ACCTGCCCACCATCTGCTCCATAAGTCAGCAGCAGT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 72 bp AGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTaGGCTCCAGGGCACTGCCCACCACACTTATGGCAC +
Preference number: 4 (lower is better)
Translates to: SHTTMVALCVDS*APGHCPPHLWH
Trigger: GTGCCATAAGTGTGGTGGGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGGGGCCAGTTCGGCAGTaGCGGGCGACTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEGPVRQ*RATSSC
Trigger: ACATGAAGAAGTCGCCCGTCACTGCCGAACTGGCCC...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCTGAGGGAGGTGGTGTaGCACTTTTACAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSPREVWNPKGRLGFASLLREVV*HFYRGR
Trigger: CCTTCCTCTGTAAAAGTGTCACACCACCTCCCTCAG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGACCCGATCTAATCATTaGCAGTGGCTTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRTRSNH*QWLPGC
Trigger: ACACCCTGGAAGCCACTGTCAATGATTAGATCGGGT...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGCCGATCACTGAGCATTaGAACACTCCCCACCACATT +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEPITEH*NTPHHI
Trigger: AATGTGGTGGGGAGTGTTTCAATGCTCAGTGATCGG...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGCCTGGGATTTGTCCTaGGACACTGGTTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGAWDLS*DTGFAD
Trigger: GTCAGCAAAACCAGTGTCTCAGGACAAATCCCAGGC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCTGTGAATGGTGTGGATaGGCCATACCACAATGGTGG +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTACEWCG*AIPQWW
Trigger: CCACCATTGTGGTATGGCTCATCCACACCATTCACA...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTCAAAGGGTCCACCTTaGCCCTCTCCTGCCTACTGC +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRSKGPP*PSPAYC
Trigger: GCAGTAGGCAGGAGAGGGTCAAGGTGGACCCTTTGA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTCCATCTTGAGGACCTaGTTGGGCTGCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRSILRT*LGCWAD
Trigger: GTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGACCTCATTCTCGGCAATaGCCCTCTCCTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRPHSRQ*PSPSCC
Trigger: ACAGCATGAAGGAGAGGGGCATTGCCGAGAATGAGG...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCAGCCAGTCTCCACCTaGTTTGAACTCAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRQPVST*FELRKE
Trigger: CTCTTTCCTGAGTTCAAAGCAGGTGGAGACTGGCTG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGTCTCCGAAGGGCCAGTaGAAAGATGGTAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRSPKGQ*KDGNQP
Trigger: TGGCTGGTTACCATCTTTGCACTGGCCCTTCGGAGA...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGCTCTCTCTGCCCATTaGGGGAGACGATGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAALSAH*GRRCLS
Trigger: GCTCAGGCATCGTCTCCCGCAATGGGCAGAGAGAGC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCATGAACCTGCACACATaGTCCTTCCCTTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLMNLHT*SFPCNF
Trigger: GAAGTTGCAAGGGAAGGACCATGTGTGCAGGTTCAT...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTAGGAAGCCCACAGAGTaGATGGCCTCGATGGACTCC +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLARKPTE*MASMDS
Trigger: GGAGTCCATCGAGGCCATCCACTCTGTGGGCTTCCT...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATCGGGCTCCTCATCCGTaGTGCCCGATGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNRAPHP*CPMCWA
Trigger: AGCCCAGCACATCGGGCACCACGGATGAGGAGCCCG...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTCCAGATAGGCAGGGCTaGCTGTCCCATCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSPDRQG*LSHLQP
Trigger: CGGCTGCAGATGGGACAGCCAGCCCTGCCTATCTGG...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGAAGCTGGGGGTAGAATaGACCTGGGGCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEKLGVE*TWGSLR
Trigger: CCTGAGAGAGCCCCAGGTCCATTCTACCCCCAGCTT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGAAGGGCTCAGGACCTaGAGGCCTGGTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEEGLRT*RPGGEN
Trigger: ATTCTCTCCACCAGGCCTCCAGGTCCTGAGCCCTTC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCGTGCACGGTGTGGCTaGGGAGGGAAGGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPARARCG*GGKACV
Trigger: AACACATGCCTTCCCTCCCCAGCCACACCGTGCACG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTATGCAAGGAGGGTCTTaGCCTCCCGCCAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SSLTTTLAATASKLGLLVMQGGS*PPASPS
Trigger: CGAGGGGCTGGCGGGAGGCCAAGACCCTCCTTGCAT...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTATGGCACAGGTGTCTTaGGGGAGGGGCAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAMAQVS*GRGSLP
Trigger: TGGTAGGCTGCCCCTCCCCCAAGACACCTGTGCCAT...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAGCCATACCACAATGGTaGCCCTCTGTGTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRAIPQW*PSVWTV
Trigger: AACTGTCCACACAGAGGGCCACCATTGTGGTATGGC...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTCCTTCCAGCGATCCTTaGCCACGTAGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSPSSDP*PRSWPA
Trigger: TGCCGGCCAACTACGTGGTCAAGGATCGCTGGAAGG...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGGTTCTTGTGGGCATTaGCTGAGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLGSCGH*LRHSEP
Trigger: CGGTTCGCTATGCCTCAGTCAATGCCCACAAGAACC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGGTTCTTGTGGGCATTaGCTGAGGCATAGCGAACCG +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGGSCGH*LRHSEP
Trigger: CGGTTCGCTATGCCTCAGTCAATGCCCACAAGAACC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGGTAGTCGGGCTTGGTaGAGTAGTCGAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAGSRAW*SSRGWQ
Trigger: TTGCCAGCCTCGACTACTTCACCAAGCCCGACTACC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTGCACTGGCGTCACATTaGCCACCCCAAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAALASH*PPQTWL
Trigger: CAGCCATGTTTGGGGTGGTCAATGTGACGCCAGTGC...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCGTGGACAGCCTTTCTaGCTCAGGGCTGTTCACCCT +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLARGQPF*LRAVHP
Trigger: AGGGTGAACAGCCCTGAGTCAGAAAGGCTGTCCACG...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGCTGGAGCCTGCTGGTaGTGGCTGTGTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSAGACW*WLCPML
Trigger: CAGCATTGGACACAGCCATCACCAGCAGGCTCCAGC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCATGATGAGGTGGGGTaGGCTATGCAGGAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLHDEVG*AMQEPE
Trigger: TTCTGGCTCCTGCATAGCTCACCCCACCTCATCATG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCCTGGTGACATTCAGTaGCTCAGAGGCCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLPGDIQ*LRGLRS
Trigger: TGACCTCAGGCCTCTGAGTCACTGAATGTCACCAGG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCGGGGGCTGTATTGCATaGTGGGGTGGGATGGGATGT +
Preference number: 4 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAGGCIA*WGGMGC
Trigger: ACATCCCATCCCACCCCATCATGCAATACAGCCCCC...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGGACAGAGGACAGGGTaGCTGGCTCAGATACGTCCA +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLGQRTG*LAQIRP
Trigger: TGGACGTATCTGAGCCAGGCACCCTGTCCTCTGTCC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGTGTCTCTGCTCTCTCTaGCCATTGCGGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQECLCSL*PLRETM
Trigger: CATCGTCTCCCGCAATGGGCAGAGAGAGCAGAGACA...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGAGGTGGGGTGAGCTATaGAGGAGCCAGAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTERWGEL*RSQNPG
Trigger: TCCTGGGTTCTGGCTCCTGCATAGCTCACCCCACCT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAAGATGTGGCTTCCTCTaGCCTGGATGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLRCGFL*PGCFLG
Trigger: CCCCAGGAAGCATCCAGGGCAGAGGAAGCCACATCT...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGTGGGACGGAGACTCTaGTTGGGGTGGGAGTATTAC +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGVGRRL*LGWEYY
Trigger: GTAATACTCCCACCCCAAGCAGAGTCTCCGTCCCAC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGGGCCACATTCTCCCTaGTCAGCAGGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAGPHSP*SAGPWP
Trigger: AGGCCATGGACCTGCTGACCAGGGAGAATGTGGCCC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGTGGTCCAGGAAGAGGTaGAACTCTGACGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGWSRKR*NSDGMC
Trigger: GCACATGCCGTCAGAGTTCCACCTCTTCCTGGACCA...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCCCTCCCGGGCAGAATTaGGGGTGCATTCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAPPGQN*GCILLV
Trigger: GACCAGGAGAATGCACCCCCAATTCTGCCCGGGAGG...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATCTCGCCCGTCCGCCGTaGACAGCCTTTCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNLARPP*TAFLTQ
Trigger: CTGAGTCAGAAAGGCTGTCCACGGCGGACGGGCGAG...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGCCATTCACCTCAAATaGGGGCGCCACGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAAIHLK*GRHGEH
Trigger: GTGTTCTCCGTGGCGCCCCCATTTGAGGTGAATGGC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCAGAGGCACAGCTCGTaGGAGGCCATTCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLQRHSS*EAIHLK
Trigger: TTTGAGGTGAATGGCCTCCCACGAGCTGTGCCTCTG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCCGTCCCTGGCCACAATaGCTCCCAGAAGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGARPWPQ*LPEDCG
Trigger: CCCACAGTCTTCTGGGAGCCATTGTGGCCAGGGACG...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGGGTGTTGTTGGTCCTaGGGCAGAGGTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLGCCWS*GRGEAG
Trigger: CCCAGCCTCACCTCTGCCCCAGGACCAACAACACCC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACCACACCTGCTGCAGCTaGGACCGCGAGATGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDHTCCS*DREMRS
Trigger: GCTCCGCATCTCGCGGTCCCAGCTGCAGCAGGTGTG...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGCCTCCCTGCACCATTTaGCTGGCACCTACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRPPCTI*LAPTKG
Trigger: TCCCTTTGTAGGTGCCAGCCAAATGGTGCAGGGAGG...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGCTTTCCACTGGACTCTaGACCCATCAGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGLSTGL*THQWLQ
Trigger: CTGGAGCCACTGATGGGTCCAGAGTCCAGTGGAAAG...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGCAAACCTGGCTGTCCTaGCCTCCATCCATACACAGG +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRQTWLS*PPSIHR
Trigger: CCTGTGTATGGATGGAGGCCAGGACAGCCAGGTTTG...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACGCAAGAGGAGGTGGCTaGGGGAGGCAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDARGGG*GRQCQQ
Trigger: CTGCTGGCACTGCCTCCCCCAGCCACCTCCTCTTGC...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCTCTCCCCTCCACCATaGAGGATATACAAAAGGATG +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVLSPPP*RIYKRM
Trigger: CATCCTTTTGTATATCCTCCATGGTGGAGGGGAGAG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTTCCCTTGCAACTTCTTaGGCACGGCCACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPASLATS*ARPPPS
Trigger: AGATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGA...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGCCCATGGCAAAGTTTaGAGGCTTGATGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLAHGKV*RLDVTV
Trigger: CACCGTGACATCAAGCCTTCAAACTTTGCCATGGGC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGCCCATGGCAAAGTTTaGAGGCTTGATGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRAHGKV*RLDVTV
Trigger: CACCGTGACATCAAGCCTTCAAACTTTGCCATGGGC...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTACTTGTGGGCATTGACTaGGGCATAGCGAACCGTTCC +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLLVGID*GIANRS
Trigger: GGAACGGTTCGCTATGCCTCAGTCAATGCCCACAAG...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGCACTGGCGTCACATTaGCCACCCCAAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSALASH*PPQTWL
Trigger: CAGCCATGTTTGGGGTGGTCAATGTGACGCCAGTGC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGGCTTTTGCCGATGTTaGTCCGGAGTTTGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLGFCRC*SGVCSG
Trigger: ACCGGAACAAACTCCGGATCAACATCGGCAAAAGCC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGGCTTTTGCCGATGTTaGTCCGGAGTTTGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAGFCRC*SGVCSG
Trigger: ACCGGAACAAACTCCGGATCAACATCGGCAAAAGCC...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTCGGAGAGGTCTCTTTTaGAGTCCTGGTAGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPARRGLF*SPGRAD
Trigger: GTCTGCCCTACCAGGACTTCAAAAGAGACCTCTCCG...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGCCACCTGGCACGAGCTaGTTGTCATTCGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEPPGTS*LSFGEA
Trigger: AGCTTCTCCGAATGACAATCAGCTCGTGCCAGGTGG...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTTGCCAGCTCCAGTGCTaGGTGAAGCTGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSCQLQC*VKLGVE
Trigger: TTCTACCCCCAGCTTCACTCAGCACTGGAGCTGGCA...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGTGGAGTTCAGAAGACTaGGCAAACCAGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEWSSED*ANQASV
Trigger: CACAGAGGCCTGGTTTGCTCAGTCTTCTGAACTCCA...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCTCCATCTTGAGGACCTaGTTGGGCTGCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGASILRT*LGCWAD
Trigger: GTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGA...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGATGGACTCCAAGATCTaGTTGCCCAGCCGCAATGTG +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEMDSKI*LPSRNV
Trigger: CACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCAT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGATGGACTCCAAGATCTaGTTGCCCAGCCGCAATGTG +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRMDSKI*LPSRNV
Trigger: CACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCAT...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGAACTCTGACGGCATGTaGTTCAGCAGCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTENSDGM*FSSIRC
Trigger: GCACCGGATGCTGCTGAAGCACATGCCGTCAGAGTT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTATCCTGGTCACTCAGGTaGTCTCCCTGTAGCACATCC +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLSWSLR*SPCSTS
Trigger: GGATGTGCTACAGGGAGAGCACCTGAGTGACCAGGA...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTTCCTGGTCACTCAGGTaGTCTCCCTGTAGCACATCC +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLASWSLR*SPCSTS
Trigger: GGATGTGCTACAGGGAGAGCACCTGAGTGACCAGGA...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAGGCTGGGGCGGCAAATaGTGCAGGTCCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKGWGGK*CRSSSA
Trigger: GGCGGAGGAGGACCTGCAGCATTTGCCGCCCCAGCC...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTGCCCACAGAATCACCTaGCCACCCATCTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAAHRIT*PPISKI
Trigger: GATCTTGGAGATGGGTGGGCAGGTGATTCTGTGGGC...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGAGGCAAGAGGTTTCTaGACCCCAGAGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLEARGF*TPEVQG
Trigger: CCCCTGCACCTCTGGGGTGCAGAAACCTCTTGCCTC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGTGCAAATGTCATTCTaGCTCCAATCCGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGVQMSF*LQSARN
Trigger: GTTTCTGGCGGATTGGAGGCAGAATGACATTTGCAC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAGTAAGCACACTCTTATaGACAAGTGTACGCGCATGC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGVSTLL*TSVRAC
Trigger: GCATGCGCGTACACTTGTGCATAAGAGTGTGCTTAC...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCTTTGAACCATGGCCTTaGTTTAAAGGACACACCCTC +
Preference number: 4 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAFEPWP*FKGHTL
Trigger: GAGGGTGTGTCCTTTAAAGCAAGGCCATGGTTCAAA...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGGAAGCCCACAGAGTaGATGGCCTCGATGGACTCC +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGARKPTE*MASMDS
Trigger: GGAGTCCATCGAGGCCATCCACTCTGTGGGCTTCCT...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACACGCACTGGGGAGCTaGGGACCCCCATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKHALGS*GPPCLG
Trigger: GCCGAGGCATGGGGGTCCCCAGCTCCCCAGTGCGTG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCCTCAAGCATACAATCTaGAAGTTAGAAGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLLKHTI*KLEGPF
Trigger: GAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGGGTCAGCTGCCTTGTaGGCATCCTTCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLGSAAL*ASFRVM
Trigger: CATCACCCGGAAGGATGCCCACAAGGCAGCTGACCC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATCCTGGGAAGGAACCATaGTCCTCTGCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNPGKEP*SSACSP
Trigger: TGGGGAGCAGGCAGAGGACCATGGTTCCTTCCCAGG...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTGAGGCAGGCGCAAGCTaGCATCCTGACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSLTTTLAATASKLGLLVEAGAS*HPDTSP
Trigger: TGGGGAAGTGTCAGGATGCCAGCTTGCGCCTGCCTC...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAAGGGCAACAGAGGCTTaGGTTTGGGGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRRATEA*VWGDSK
Trigger: TTTTGAATCTCCCCAAACCCAAGCCTCTGTTGCCCT...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTCTAGAAGGGAATGCTaGATCACAGAGTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVSRREC*ITECLV
Trigger: AACCAAGCACTCTGTGATCCAGCATTCCCTTCTAGA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCAAAGTTTGAAGGCTTaGTGTCACGGTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLQSLKA*CHGAGS
Trigger: GCTTCCTGCACCGTGACATCAAGCCTTCAAACTTTG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCATCTCAAACACTGACATaGTCAACTGGTAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWASQTLT*STGSRA
Trigger: AGCCCGACTACCAGTTGATCATGTCAGTGTTTGAGA...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGATGGTGAAGGGTCCTaGGCACTAGATCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGADGEGS*ALDQGN
Trigger: GTTCCCCTGATCTAGTGCTCAGGACCCTTCACCATC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTTCCGGAGAAGTTTCCTaGGTGTTCTGGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPASGEVS*VFWELL
Trigger: CAGAAGCTCCCAGAACACTCAGGAAACTTCTCCGGA...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGAGCAGACCCTGCATCTaGGTCAGTGACATAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQESRPCI*VSDIGC
Trigger: ACAACCTATGTCACTGACTCAGATGCAGGGTCTGCT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGCTGACATGGGCAGGATaGATAAAGGGAAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRLTWAG*IKGNLG
Trigger: GCCCAAGTTTCCCTTTATTCATCCTGCCCATGTCAG...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTAGACATCTGGGGAATTaGTGGGCCAAGCAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLARHLGN*WAKQRL
Trigger: TAACCTCTGCTTGGCCCATCAATTCCCCAGATGTCT...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGGGCAGAATTGGGGGTaGATTCTCCTGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAGQNWG*ILLVTQ
Trigger: CTGAGTGACCAGGAGAATGCACCCCCAATTCTGCCC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAAGATCACTTGCCCACTaGCTCTCACCGAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLRSLAH*LSPSCP
Trigger: TGGACAACTCGGTGAGAGGCAGTGGGCAAGTGATCT...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACGAAACTAAGCTCCGGTaGCAGGGGCCCCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDETKLR*QGPRGF
Trigger: GAAACCTCGGGGCCCCTGGCACCGGAGCTTAGTTTC...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAATACCGCGGGAGGGAGTaGCCCGAGAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKYRGRE*PESLSS
Trigger: GGAGGACAGACTCTCGGGGCACTCCCTCCCGCGGTA...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATGAAACTTGGGCTCCCTaGAGTGAAGGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNETWAP*SEGWGL
Trigger: CAGCCCCCAACCTTCACTGCAGGGAGCCCAAGTTTC...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTAGCCCACAGAGTGGATaGCCTCGATGGACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSSPQSG*PRWTPR
Trigger: TCTTGGAGTCCATCGAGGCCATCCACTCTGTGGGCT...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAGACCACAGGTCGTCGTaGCGGCCCATCTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKDHRSS*RPISRF
Trigger: GAACCGGGAGATGGGCCGCCACGACGACCTGTGGTC...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGTCTGGGGGAGATGGTaGCCACTTTCTCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLVWGRW*PLSQGL
Trigger: CAAGCCCTGAGAAAGTGGCCACCATCTCCCCCAGAC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGACGGAGACTCTGCTTaGGGTGGGAGTATTACAGTA +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGDGDSA*GGSITV
Trigger: TACTGTAATACTCCCACCCCAAGCAGAGTCTCCGTC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 72 bp CAGTCTCCACCTGCTTTGAACTCAGGAAAGAGCAGGTaGGCTGGAACTGCAGTAGGCAGGACTGAGGTTAGA +
Preference number: 4 (lower is better)
Translates to: QSPPALNSGKSR*AGTAVGRTEVR
Trigger: TCTAACCTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGCAGGTGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGCTCATACTTCTCCTTaGTCATCCCTACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGAHTSP*SSLPVP
Trigger: AGGAACAGGTAGGGATGATCAAGGAGAAGTATGAGC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACGGTAGTCGGGCTTGGTaGAGTAGTCGAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDGSRAW*SSRGWQ
Trigger: TTGCCAGCCTCGACTACTTCACCAAGCCCGACTACC...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAACCTAGGTCTTGTGGGTaGACCGGGCCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKPRSCG*TGPTPA
Trigger: AGCAGGTGTGGGCCCGGTTCACCCACAAGACCTAGG...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATAATCCTACCAGGGAGTaGTGGCACAGGTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNNPTRE*WHRCLG
Trigger: CCCAAGACACCTGTGCCATCACTCCCTGGTAGGATT...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTACATGGTCCTTCCCTTaGAACTTCTTGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSTWSFP*NFLSTA
Trigger: GGCCGTGCTCAAGAAGTTGCAAGGGAAGGACCATGT...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGTTCAGCAGCATCCGGTaGTCATACTTCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEFSSIR*SYFSLI
Trigger: GATCAAGGAGAAGTATGAGCACCGGATGCTGCTGAA...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCTGCCCCTCTCCTTCATaGTGTTCTCAAACACTGACA +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLCPSPS*CSQTLT
Trigger: TGTCAGTGTTTGAGAACAGCATGAAGGAGAGGGGCA...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCCCTCATTCTCGGCAATaGCCCTCTCCTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAPHSRQ*PSPSCC
Trigger: ACAGCATGAAGGAGAGGGGCATTGCCGAGAATGAGG...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACACAGGAGGGCATCGGTaGCTGCCTTCTCCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDTGGHR*LPSPSQ
Trigger: TTGACTGGGAGAAGGCAGGCACCGATGCCCTCCTGT...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATGCCAGATGGAGAAGGTaGTCTTGGCCCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNARWRR*SWPRHP
Trigger: AGGATGTCTGGGCCAAGAGCACCTTCTCCATCTGGC...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCCTCTAGAAGGGAATaGTGGATCACAGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAPSRRE*WITECL
Trigger: CAAGCACTCTGTGATCCAGCATTCCCTTCTAGAGGG...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGATGAACCTGCACACATaGTCCTTCCCTTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGMNLHT*SFPCNF
Trigger: GAAGTTGCAAGGGAAGGACCATGTGTGCAGGTTCAT...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACATCCCCCGTGGTGTTaGTGTACTGCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKHPPWC*CTAGPA
Trigger: GGCTGGCCCGGCAGTACACCAACACCACGGGGGATG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCTGGGCAGTGAGTTTGTaGCCATCTCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAWAVSL*PSLRGF
Trigger: AAACCCCCTCAGAGATGGCCACAAACTCACTGCCCA...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAGCTTCTCTGAAGGGGTaGGGGGACTTTGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLASLKG*GDFGWK
Trigger: TTTCCAGCCAAAGTCCCCCCACCCCTTCAGAGAAGC...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGGCTCCACCCAAATCTaGAGGCAAGAGGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAGSTQI*RQEVSA
Trigger: TGCAGAAACCTCTTGCCTCCAGATTTGGGTGGAGCC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTACCTCCAACTTCCCACTaGGAAATACTTGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLPPTSH*EILAQE
Trigger: TTCCTGGGCAAGTATTTCCCAGTGGGAAGTTGGAGG...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCTTCTTCCTCTTTCCCTaGATGTCTTGGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLFFLFP*MSWLAL
Trigger: GAGAGCAAGCCAAGACATCCAGGGAAAGAGGAAGAA...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGAGACTCTGCTTGGGGTaGGAGTATTACAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGRLCLG*EYYSTL
Trigger: CAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATACCACATTCCAAACCTaGCTGTCCTGGCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNTTFQT*LSWPPS
Trigger: GGATGGAGGCCAGGACAGCCAGGTTTGGAATGTGGT...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGATTAGAACCCAAATCTaGCTTTTGTTGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEIRTQI*LLLPDG
Trigger: TCCATCTGGCAACAAAAGCCAGATTTGGGTTCTAAT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGGATCACAGAGTGCTTaGTTTCATCCAACCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAGSQSA*FHPTPD
Trigger: ATCTGGGGTTGGATGAAACCAAGCACTCTGTGATCC...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAACATGCTTTGAACCATaGCCTTGCTTTAAAGGACAC +
Preference number: 4 (lower is better)
Translates to: ATASKLGLLVAQFQPALGTCFEP*PCFKGH
Trigger: GTGTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGT...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGCTCATACTTCTCCTTaGTCATCCCTACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLAHTSP*SSLPVP
Trigger: AGGAACAGGTAGGGATGATCAAGGAGAAGTATGAGC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGGCTTTTTAATGGTGTaGTGGCTACTTCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLGFLMV*WLLPFR
Trigger: TCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACTCCTCCCCCGATCACTaGGCATTGAAACACTCCCCA +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDSSPDH*ALKHSP
Trigger: TGGGGAGTGTTTCAATGCTCAGTGATCGGGGGAGGA...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTACGTGCCAGTCACATTaGGGTCTATGTAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLATCQSH*GLCKWH
Trigger: GTGCCATTTACATAGACCTCAATGTGACTGGCACGT...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTAGCTGTGCTCAGGGTTaGGTAGTGGAACCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SSLTTTLAATASKLGLLVSCAQG*VVEPSR
Trigger: TCTAGAGGGTTCCACTACTCAACCCTGAGCACAGCT...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACAGGTGGAGGGCAGCCTaGCCATGGCAAAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDRWRAA*PWQSLK
Trigger: CTTCAAACTTTGCCATGGGCAGGCTGCCCTCCACCT...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGTCTCTGTGGGCCTGTaGGGTCCGACTCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKVSVGL*GPTLSV
Trigger: GACGGAGAGAGTCGGACCCCACAGGCCCACAGAGAC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCGTAAACATTCTTAGGTaGCTTCCCGAGGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGAVNILR*LPEGGE
Trigger: TTCCCCTCCCTCGGGAAGCCACCTAAGAATGTTTAC...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACCCTGCACCATTTGGCTaGCACCTACAAAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDPAPFG*HLQREL
Trigger: CAGCTCCCTTTGTAGGTGCCAGCCAAATGGTGCAGG...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTTGGAGAAGGTGCTCTTaGCCCAGACATCCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAWRRCS*PRHPQK
Trigger: TTTTTGAGGATGTCTGGGCCAAGAGCACCTTCTCCA...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATGCTTTTGTTGCCAGATaGAGAAGGTGCTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNAFVAR*RRCSWP
Trigger: GGGCCAAGAGCACCTTCTCCATCTGGCAACAAAAGC...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTGACTTATGGAGCAGATaGTGGGCAGGTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSLTTTLAATASKLGLLVDLWSR*WAGSLH
Trigger: GTGAAGGGAACCTGCCCACCATCTGCTCCATAAGTC...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp ATCACTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCTCTCAAACACTGACATaGTCAACTGGTAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ITQAYNLEVRRAFLPPGASQTLT*STGSRA
Trigger: AGCCCGACTACCAGTTGATCATGTCAGTGTTTGAGA...GGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR TCA 90 bp ATGGTGTGGATGAGCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTGCTGTTCTCAAACACTaGCATGATCAACTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: MVWMSHTTMVALCVDSLAAVLKH*HDQLVV
Trigger: GACTACCAGTTGATCATGTCAGTGTTTGAGAACAGC...AGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGCTCATCCACACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp TTCCCTGGATGTCTTGGCTTGCTCTCTGTGACTCAGGGAAGGACAGAGAGGCTAGTTTTCTCCGCAATGTaGACAAAGGTCCTCTCAACT +
Preference number: 4 (lower is better)
Translates to: FPGCLGLLSVTQGRTERLVFSAM*TKVLST
Trigger: AGTTGAGAGGACCTTTGTGCACATTGCGGAGAAAAC...TAGCCTCTCTGTCCTTCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR GCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAATTGGCTCCAGGGCACTaGCCACCACACTTATGGCAC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKLAPGH*PPHLWH
Trigger: GTGCCATAAGTGTGGTGGGCAGTGCCCTGGAGCCAA...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAATCTGTGTGGACAGTTTaGCTCCAGGGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKSVWTV*LQGTAH
Trigger: GTGGGCAGTGCCCTGGAGCCAAACTGTCCACACAGA...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACCAAAGTTTGAAGGCTTaGTGTCACGGTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDQSLKA*CHGAGS
Trigger: GCTTCCTGCACCGTGACATCAAGCCTTCAAACTTTG...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACGGATGTGTGAGTGTGTaGTTATTGCGTCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDGCVSV*LLRPGK
Trigger: CTTCCCAGGACGCAATAATCACACACTCACACATCC...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATTCAATGATGATGGCCTaGGAAAGTCTCGCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNSMMMA*ESLARS
Trigger: TGACCTAGCGAGACTTTCTCAGGCCATCATCATTGA...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGAAACTACCAATGACTaGATAGACATCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGETTND*IDIFLA
Trigger: AGCCAGAAAGATGTCTATGCAGTCATTGGTAGTTTC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGCCCACAGAGTGGATaGCCTCGATGGACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKSPQSG*PRWTPR
Trigger: TCTTGGAGTCCATCGAGGCCATCCACTCTGTGGGCT...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGATGGGGGTGGGGGTaGGGCACAAGTATTAGAACC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKRWGWG*GTSIRT
Trigger: GGTTCTAATACTTGTGCCCCACCCCCACCCCCATCT...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGAGGGGTAGAAGAGTaGAGCTGGGATGAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKRGVEE*SWDESS
Trigger: GCTACTCTCATCCCAGCTTCACTCTTCTACCCCTCT...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATGTAAATGGCACTTCCTaGAATTACACAGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNVNGTS*NYTVHS
Trigger: GCTGTGCACTGTGTAATTCCAGGAAGTGCCATTTAC...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGGAGTTTGTTCCGGTTaGCATCTGTCTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKGVCSG*HLSPPR
Trigger: TCTGGGAGGAGACAGATGTCAACCGGAACAAACTCC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACAGACACTGGTTTTGCTaGCAAGCACATGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDRHWFC*QAHGFS
Trigger: TGAGAAACCATGTGCTTGTCAGCAAAACCAGTGTCT...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACAGCCGCCTTCTCAATaGTGGATCTCCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKQPPSQ*WISHFQ
Trigger: TTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCTG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAAGTGGATGGCCTCGATaGACTCCAAGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKSGWPR*TPRSAC
Trigger: GCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACT...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATGGACTGAGCCTTCCTaGGGTAAGATGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKWTEPS*GKMCEE
Trigger: CTCCTCACACATCTTACCCCAGGAAGGCTCAGTCCA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp CAGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGTACCTCAGGGTTCTaGTCACTGAGATGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QSFMAYKTLSPPPWRIYKSTSGF*SLRWSC
Trigger: ACAGCTCCATCTCAGTGACCAGAACCCTGAGGTACT...TTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATTTTCACAAGGCACTTTaGGATCTTAGAGTACCTCAG +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNFHKAL*DLRVPQ
Trigger: CTGAGGTACTCTAAGATCCCAAAGTGCCTTGTGAAA...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGATCCCTATCCAACCTaGCTCTCTTCTGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKDPYPT*LSSAVS
Trigger: AGACACAGCAGAAGAGAGGCAGGTTGGATAGGGATC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGTGATTATTGCGTCCTaGGAAGGAACCATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKVIIAS*EGTMVL
Trigger: GAGGACCATGGTTCCTTCCCAGGACGCAATAATCAC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACTTGCTGACAAGCACATaGTTTCTCACGTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: GCPPKGQHALNHGLALKDLLTST*FLTSSL
Trigger: TAAGGATGACGTGAGAAACCATGTGCTTGTCAGCAA...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR TCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATATAGGAAACTACCAATaGCTGCATAGACATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNIGNYQ*LHRHLS
Trigger: AGAAAGATGTCTATGCAGTCATTGGTAGTTTCCTAT...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR GCA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATTCAGCAGCATCCGGTaGTCATACTTCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKFSSIR*SYFSLI
Trigger: GATCAAGGAGAAGTATGAGCACCGGATGCTGCTGAA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CCA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATTACAAAGAAAGATTTTaGGGAAAGGAGTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNYKERF*GKECVT
Trigger: AGTCACACACTCCTTTCCCCAAAATCTTTCTTTGTA...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
3UTR CAA 72 bp TATACAAAAGGATGTCCCCCTAAAGGACAACATGCTTaGAACCATGGCCTTGCTTTAAAGGACACACCCTCT +
Preference number: 4 (lower is better)
Translates to: YTKGCPPKGQHA*NHGLALKDTPS
Trigger: AGAGGGTGTGTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCCTTTTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 90 bp CGGGCTGCGCGGCGCTGGGGGCCTGGCTCCGGCTTGGGCTCGCCCTaGGCCCAGGCCGCGGCCAGGAGGTTGTTTGGGGCGGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RAARRWGPGSGLGSP*AQAAARRLFGAEVS
Trigger: GCTGACCTCCGCCCCAAACAACCTCCTGGCCGCGGCCTGGGCCCAGGGCGAGCCCAAGCCGGAGCCAGGCCCCCAGCGCCGCGCAGCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp GGCGGGGAATCCGGCTCCTGGTGGCGGCTGCCCTCCCGCTCTTCCTaGGCAAGGCCGCTGCCGGCTCAGAGGCGGGCGTGTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GGESGSWWRLPSRSS*ARPLPAQRRACPPQ
Trigger: CTGAGGAGGACACGCCCGCCTCTGAGCCGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp CGGCTTGGGCTCGCCCTGGGCCCAGGCCGCGGCCAGGAGGTTGTTTaGGGCGGAGGTCAGCAGCAGTGGCCGACCCTGGGGGCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: RLGLALGPGRGQEVV*GGGQQQWPTLGASA
Trigger: TGCAGACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCCGCCCCAAACAACCTCCTGGCCGCGGCCTGGGCCCAGGGCGAGCCCAAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp TGCAGCTGGGACCGCGAGATGCGGAGCACCGAGGGCATGAGTCTGTaGTTGCCAGCAGCGAGGGGCGCGTGGCGCCGGTGGGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: CSWDREMRSTEGMSL*LPAARGAWRRWGAR
Trigger: GCGGGCGCCCCACCGGCGCCACGCGCCCCTCGCTGCTGGCAACCACAGACTCATGCCCTCGGTGCTCCGCATCTCGCGGTCCCAGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS GCA 90 bp CATGCGGAGGCCAATGGGGCGGGGAATCCGGCTCCTGGTGGCGGCTaGCCTCCCGCTCTTCCTGGGCAAGGCCGCTGCCGGCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: HAEANGAGNPAPGGG*PPALPGQGRCRLRG
Trigger: GCCTCTGAGCCGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp CAGGCATGGGCATGCGGAGGCCAATGGGGCGGGGAATCCGGCTCCTaGTGGCGGCTGCCCTCCCGCTCTTCCTGGGCAAGGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: QAWACGGQWGGESGS*WRLPSRSSWARPLP
Trigger: CGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATGCCCATGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCAGCCTCCCGGGCAGAATaGGGGGTGCATTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAASRAE*GVHSPG
Trigger: ACCAGGAGAATGCACCCCCAATTCTGCCCGGGAGGC...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCATGCTCTCTCTGCCCATaGCGGGAGACGATGCCTGAG +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGACSLCP*RETMPE
Trigger: CTCAGGCATCGTCTCCCGCAATGGGCAGAGAGAGCA...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCACTCCAAACCAGGGTGTaGTTGGTCCTGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGALQTRV*LVLGQR
Trigger: CCTCTGCCCCAGGACCAACAACACCCTGGTTTGGAG...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 90 bp ACACCTGCTGCAGCTGGGACCGCGAGATGCGGAGCACCGAGGGCATaGGTCTGTGGTTGCCAGCAGCGAGGGGCGCGTGGCGCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: TPAAAGTARCGAPRA*VCGCQQRGARGAGG
Trigger: CCCACCGGCGCCACGCGCCCCTCGCTGCTGGCAACCACAGACTCATGCCCTCGGTGCTCCGCATCTCGCGGTCCCAGCTGCAGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 90 bp GTCTCGGAACGGCCATCGCCCTGGCTCAGCTGGGGTGGCAGGGGCTaGGGCGGCAAATGCTGCAGGTCCTCCTCCGCCAGCGCCTGCATG +
Preference number: 5 (lower is better)
Translates to: VSERPSPWLSWGGRG*GGKCCRSSSASACM
Trigger: CATGCAGGCGCTGGCGGAGGAGGACCTGCAGCATTTGCCGCCCCAGCCCCTGCCACCCCAGCTGAGCCAGGGCGATGGCCGTTCCGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 90 bp GCGCCAGGTCCTGCTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTTaGCCGACAGTGAGCCTGAGGGCTCCGAGCCCGTGTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: APGPAAAEPACSTAL*PTVSLRAPSPCPPQ
Trigger: CTGAGGAGGACACGGGCTCGGAGCCCTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGGACCTGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp AGCCCGTGCCTGAGAGGGTCTCAGAGGCACGGCGCTGCTCCTCACTaGAGGAGGACGAGGCCCCTGAGGCCAGCCGCAACAGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SPCLRGSQRHGAAPH*RRTRPLRPAATAGG
Trigger: GCCGCCTGCTGTTGCGGCTGGCCTCAGGGGCCTCGTCCTCCTCCAGTGAGGAGCAGCGCCGTGCCTCTGAGACCCTCTCAGGCACGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp CCGCGCCATGGGATCTGCTGGCGGGCTGCTGGGCTGCAACAGGCATaGGCATGCGGAGGCCAATGGGGCGGGGAATCCGGCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PRHGICWRAAGLQQA*ACGGQWGGESGSWW
Trigger: CCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCCATGGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCACATTGGGCAGTGAGTTaGTGGCCATCTCTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAHWAVS*WPSLRG
Trigger: CCCCCTCAGAGATGGCCACAAACTCACTGCCCAATG...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp CCCATCGGCCATGGAGGCCCGGCCCCTGGACTCCTTCTGATCGTCTaGCAGCAGCGTGGACGGGGCACCCTCCTGGCTCCGGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: PIGHGGPAPGLLLIV*QQRGRGTLLAPVSA
Trigger: AGCACTGACCGGAGCCAGGAGGGTGCCCCGTCCACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGGCCGGGCCTCCATGGCCGATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp AGCAGGCGGCCCTGCCTCTTCTCCATCACCAGCCGCGCCAGGTCCTaGTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTTGGCCGACAGT +
Preference number: 5 (lower is better)
Translates to: SRRPCLFSITSRARS*CGRARLLHRSLADS
Trigger: ACTGTCGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGGACCTGGCGCGGCTGGTGATGGAGAAGAGGCAGGGCCGCCTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp CATGGGATCTGCTGGCGGGCTGCTGGGCTGCAACAGGCATGGGCATaGGGAGGCCAATGGGGCGGGGAATCCGGCTCCTGGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: HGICWRAAGLQQAWA*GGQWGGESGSWWRL
Trigger: CAGCCGCCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp GCTGTGTCCAATGCTGGGGCCGCGCCATGGGATCTGCTGGCGGGCTaGTGGGCTGCAACAGGCATGGGCATGCGGAGGCCAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: AVSNAGAAPWDLLAG*WAATGMGMRRPMGR
Trigger: CCGCCCCATTGGCCTCCGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCCATGGCGCGGCCCCAGCATTGGACACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp AGGAGCCGCCGCCGCCGGGGTGAGGGTAATGCTCCGTCTCCAGCGTaGAGGAGGAGAACACGGAGGACGCCAGTCGTCGCAGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: RSRRRRGEGNAPSPA*RRRTRRTPVVAGGC
Trigger: ACAGCCCCCTGCGACGACTGGCGTCCTCCGTGTTCTCCTCCTCCACGCTGGAGACGGAGCATTACCCTCACCCCGGCGGCGGCGGCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCACCCAGATGTAGGCAGTaGAGGCTCATGATGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGAPRCRQ*RLMMRW
Trigger: CCACCTCATCATGAGCCTCAACTGCCTACATCTGGG...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 90 bp GTCCATGCGGCCACTGGCCTGTCGGTCAGCGTGGCCTGTGTCCACTaGCAGCATCTGGGCTGGCTGAGAGGAGCAGGCCTGGCGCGAGGG +
Preference number: 5 (lower is better)
Translates to: VHAATGLSVSVACVH*QHLGWLRGAGLARG
Trigger: CCCTCGCGCCAGGCCTGCTCCTCTCAGCCAGCCCAGATGCTGTCAGTGGACACAGGCCACGCTGACCGACAGGCCAGTGGCCGCATGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS TCA 90 bp GGGCAGCCAGGGTGCCCAGGTCGGGGTCGGGGGCCAGTTCGGCAGTaGCGGGCGACTTCTTCATGTCGCCAGGAGAGACAAGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: GQPGCPGRGRGPVRQ*RATSSCRQERQAPA
Trigger: CGCTGGTGCTTGTCTCTCCTGGCGACATGAAGAAGTCGCCCGTCACTGCCGAACTGGCCCCCGACCCCGACCTGGGCACCCTGGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 90 bp CTCAGAGGCACGGCGCTGCTCCTCACTGGAGGAGGACGAGGCCCCTaGGGCCAGCCGCAACAGCAGGCGGCCCTGCCTCTTCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: LRGTALLLTGGGRGP*GQPQQQAALPLLHH
Trigger: GTGATGGAGAAGAGGCAGGGCCGCCTGCTGTTGCGGCTGGCCTCAGGGGCCTCGTCCTCCTCCAGTGAGGAGCAGCGCCGTGCCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp CCCCCACTCATGTTGGTTTCGTCCTTAAGGGCGGCCGCTAGGCACTaGATCCGCCAGCCAGAGGGAGGGGTGTCCGCCGGGCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: PPLMLVSSLRAAARH*IRQPEGGVSAGPAL
Trigger: CAGGGCAGGCCCGGCGGACACCCCTCCCTCTGGCTGGCGGATGCAGTGCCTAGCGGCCGCCCTTAAGGACGAAACCAACATGAGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp TCCTCAGCCAGCGGCACCGAGCGGAAGGCGTTGCTCAGGGCCTCCTaGTCCACAGAGGCTGACACGTCCATGCGGCCACTGGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: SSASGTERKALLRAS*STEADTSMRPLACR
Trigger: CCGACAGGCCAGTGGCCGCATGGACGTGTCAGCCTCTGTGGAGCAGGAGGCCCTGAGCAACGCCTTCCGCTCGGTGCCGCTGGCTGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 90 bp TCCTCCTCAGAGCCCGTGCCTGAGAGGGTCTCAGAGGCACGGCGCTaGTCCTCACTGGAGGAGGACGAGGCCCCTGAGGCCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: SSSEPVPERVSEARR*SSLEEDEAPEASRN
Trigger: GTTGCGGCTGGCCTCAGGGGCCTCGTCCTCCTCCAGTGAGGAGCAGCGCCGTGCCTCTGAGACCCTCTCAGGCACGGGCTCTGAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp TTGCCCAGCCGCAATGTGGTGCTCAGCGTGAAGGTGCCTCGCGGCTaGCTACGGCGCAGGTCGGCCAGGTTCCGGCCCTGGAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: LPSRNVVLSVKVPRG*LRRRSARFRPWSCI
Trigger: GATGCAGCTCCAGGGCCGGAACCTGGCCGACCTGCGCCGTAGCCAGCCGCGAGGCACCTTCACGCTGAGCACCACATTGCGGCTGGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 90 bp ACGGAGGACGCCAGTCGTCGCAGGGGGCTGTACCGCGGGAGGGAGTaGCCCGAGAGTCTGTCCTCCTCCAACTGTCTCTGTGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TEDASRRRGLYRGRE*PESLSSSNCLCGPV
Trigger: CACAGGCCCACAGAGACAGTTGGAGGAGGACAGACTCTCGGGGCACTCCCTCCCGCGGTACAGCCCCCTGCGACGACTGGCGTCCTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCTCCCGCCAGCCCCTCGGGGTGGATCAGACCCAGCCATGCCAAGAGATCACAGGCATGAGTCTGTGGTaGCCAGCAGCGAGGGGCGCG +
Preference number: 5 (lower is better)
Translates to: ASRQPLGVDQTQPCQEITGMSLW*PAARGA
Trigger: CGCGCCCCTCGCTGCTGGCAACCACAGACTCATGCC...TGTGATCTCTTGGCATGGCTGGGTCTGATCCACCCCGAGGGGCTGGCGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 90 bp GCCAGGAGGTTGTTTGGGGCGGAGGTCAGCAGCAGTGGCCGACCCTaGGGGCGTCTGCAGCTGGAGCCTGCTGGTGATGGCTGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: ARRLFGAEVSSSGRP*GRLQLEPAGDGCVQ
Trigger: TTGGACACAGCCATCACCAGCAGGCTCCAGCTGCAGACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCCGCCCCAAACAACCTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCTAAGGCCTGGCGGGGCGCCGCGTGTGCTCGCGCGCGTCCTCGCGGGTGCATGCTCATACTTCTCCTaGATCATCCCTACCTGTTCC +
Preference number: 5 (lower is better)
Translates to: ALRPGGAPRVLARVLAGACSYFS*IIPTCS
Trigger: GGAACAGGTAGGGATGATCAAGGAGAAGTATGAGCA...TGCACCCGCGAGGACGCGCGCGAGCACACGCGGCGCCCCGCCAGGCCTTAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGTGCGGCCGAGCCCGCTaGCTCCACCGCTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: APFFLPAPNQGVVGPGAECGRAR*LHRSLA
Trigger: GGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCA...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp GGAGCCACTACGAGGCCCCAGCACCTCCCCCAAGGCAACTGCCGCTaGAGCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GATTRPQHLPQGNCR*SLLLLFLLLLFFLL
Trigger: GAGGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGCTGCAGCGGCAGTTGCCTTGGGGGAGGTGCTGGGGCCTCGTAGTGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGGTGGCTTCCAGGGTGTaGGGGTGGGGTGGACAGGTG +
Preference number: 5 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGVASRV*GWGGQV
Trigger: CACCTGTCCACCCCACCCCAACACCCTGGAAGCCAC...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp ACTGCTGGAGCCACTACGAGGCCCCAGCACCTCCCCCAAGGCAACTaGCGCTGCAGCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TAGATTRPQHLPQGN*RCSLLLLFLLLLFF
Trigger: GAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGCTGCAGCGGCAGTTGCCTTGGGGGAGGTGCTGGGGCCTCGTAGTGGCTCCAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp GAAACCCGGCCACATTCCGAGGGGGCCGCACATCCCCCGTGGTGTTaGTGTACTGCCGGGCCAGCCCGAAGTCCAGCATATAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: ETRPHSEGAAHPPWC*CTAGPARSPAYSTS
Trigger: GGAAGTGCTATATGCTGGACTTCGGGCTGGCCCGGCAGTACACCAACACCACGGGGGATGTGCGGCCCCCTCGGAATGTGGCCGGGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 90 bp ACATTGACCACCCCAAACATGGCTGCCGTCTGCCGGGTGTTCTGCTaGGGCGGGGTAGAGGTGCTCGTGGACAGGAGGGCATCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TLTTPNMAAVCRVFC*GGVEVLVDRRASVP
Trigger: AGGCACCGATGCCCTCCTGTCCACGAGCACCTCTACCCCGCCCCAGCAGAACACCCGGCAGACGGCAGCCATGTTTGGGGTGGTCAATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 90 bp CGGGCGACTTCTTCATGTCGCCAGGAGAGACAAGCACCAGCGTTTTaGAGCCCTCCTCAGGCTCCAGGTCCCCATCGGCCATGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RATSSCRQERQAPAF*SPPQAPGPHRPWRP
Trigger: GGGCCTCCATGGCCGATGGGGACCTGGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTGTCTCTCCTGGCGACATGAAGAAGTCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 90 bp AGCAGGACAGGGATACGGCTCCTGGGGCGAGAGCCTGGCATAGCATaGCGTCTGGGGGAGATGGTGGCCACTTTCTCAGGGCTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SRTGIRLLGREPGIA*RLGEMVATFSGLGS
Trigger: GGAGCCAAGCCCTGAGAAAGTGGCCACCATCTCCCCCAGACGCCATGCTATGCCAGGCTCTCGCCCCAGGAGCCGTATCCCTGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp GGCCTCCCGGGCAGAATTGGGGGTGCATTCTCCTGGTCACTCAGGTaGTCTCCCTGTAGCACATCCTCGGTGTTCTCCCGGAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GLPGRIGGAFSWSLR*SPCSTSSVFSRSRS
Trigger: GGACCTGCTCCGGGAGAACACCGAGGATGTGCTACAGGGAGAGCACCTGAGTGACCAGGAGAATGCACCCCCAATTCTGCCCGGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 90 bp CTCGGGCTCCTCATCCGTGGTGCCCGATGTGCTGGGCTCAGCCCCTaGAGGGAAGTCCTTGAGCTCCGTCTCCTTGTCGATGATGACCCA +
Preference number: 5 (lower is better)
Translates to: LGLLIRGARCAGLSP*REVLELRLLVDDDP
Trigger: TGGGTCATCATCGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGGATGAGGAGCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS-3UTR CAA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCGGCTCAGTGCGGCGTaGGGTGACCCGCTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLRLSAA*GDPLPP
Trigger: CGGAGGGAGCGGGTCACCCAACGCCGCACTGAGCCG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAACGGCCACCTCCATCTaGAGGACCTGCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SPHIHSWSRAAARAGVRATATSI*RTCLGC
Trigger: GCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGT...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCTTGCTCCACCGCTCTTaGGCCGACAGTGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SGSAALWASFRVMVAGRSLLHRS*ADSEPE
Trigger: CTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCAA...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCCCGGCCTTTGGTTGTaGCGCGCTGAGCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: APFFLPAPNQGVVGPGAEPGLWL*RAEPGV
Trigger: AACTCCAGGCTCAGCGCGCAACAACCAAAGGCCGGG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCGAGGGAAGAGTGGGCTaGGGCTGGGGACCCATCACT +
Preference number: 5 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLEGRVG*GWGPIT
Trigger: AGTGATGGGTCCCCAGCCCAAGCCCACTCTTCCCTC...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TGTTGGGGTGGGGTGGACAGGTGCAGGATGGGCAGAGGCCATGCAGTGACTGGGAGGGCAGACTGGGTTTaGCGTCTCTGCCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CWGGVDRCRMGRGHAVTGRADWV*RLCQLQ
Trigger: CTGGAGCTGGCAGAGACGCAAAACCCAGTCTGCCCT...CCCAGTCACTGCATGGCCTCTGCCCATCCTGCACCTGTCCACCCCACCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 90 bp GAGCACGGCCACCTCCATCTTGAGGACCTGCTTGGGCTGCTGGGCTaGCTCCACCTTGAGGGCCACATTCTCCCTGGTCAGCAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: EHGHLHLEDLLGLLG*LHLEGHILPGQQVH
Trigger: ATGGACCTGCTGACCAGGGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS-3UTR CAA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGACCCTCCGGACCCTGTaGAGCAACCGCGCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: GSPREVWNPKGRLGFASLTLRTL*SNRARS
Trigger: AGAACGGGCGCGGTTGCTCAACAGGGTCCGGAGGGT...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp TGCAGGAAGCCCACAGAGTGGATGGCCTCGATGGACTCCAAGATCTaGTTGCCCAGCCGCAATGTGGTGCTCAGCGTGAAGGTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: CRKPTEWMASMDSKI*LPSRNVVLSVKVPR
Trigger: GCGAGGCACCTTCACGCTGAGCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACTCTGTGGGCTTCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS-3UTR CAA 90 bp TCAGGGTCAGCTGCCTTGTGGGCATCCTTCCGGGTGATGGTGGCTGGACGCAGCTTCCCTTGCAACTTCTaGAGCACGGCCACCTCCATC +
Preference number: 5 (lower is better)
Translates to: SGSAALWASFRVMVAGRSFPCNF*STATSI
Trigger: GATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGAA...GCTGCGTCCAGCCACCATCACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCCCCATCTCCCGGTTCTaGTGGGCATTGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLPISRF*WALTEA
Trigger: TGCCTCAGTCAATGCCCACAAGAACCGGGAGATGGG...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAGCCTCCCGGGCAGAATaGGGGGTGCATTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRASRAE*GVHSPG
Trigger: ACCAGGAGAATGCACCCCCAATTCTGCCCGGGAGGC...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGCATGGAGCGTAGCCTAGGCCTGGTGGGCGAACGAACCAGGCGTCCCCAGAAGGGGCTTTTGCCGATGTaGATCCGGAGTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: SMERSLGLVGERTRRPQKGLLPM*IRSLFR
Trigger: CCGGAACAAACTCCGGATCAACATCGGCAAAAGCCC...CTTCTGGGGACGCCTGGTTCGTTCGCCCACCAGGCCTAGGCTACGCTCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGGGGACGCGCTGGCATaGCGCGCGGCGGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSGDALA*RAADVD
Trigger: GTCCACATCCGCCGCGCGCAATGCCAGCGCGTCCCC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGAGGATGGAGCCAACTTaGGGGCAGGTCAGACCTGCC +
Preference number: 5 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRRMEPT*GQVRPA
Trigger: GGCAGGTCTGACCTGCCCCAAAGTTGGCTCCATCCT...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGACATTCACGGTTCGGTaGGTGGCAAGGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRTFTVR*VARSRP
Trigger: GGGCCTGCTCCTTGCCACCAACCGAACCGTGAATGT...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAGTGACTGGGAAGGGCTaGGGGAGGGGTGTTACATTC +
Preference number: 5 (lower is better)
Translates to: SPHIHSWSRAAARAGVRAVTGKG*GRGVTF
Trigger: GAATGTAACACCCCTCCCCAAGCCCTTCCCAGTCAC...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGCCCTCCCTGCACCATTaGGCTGGCACCTACAAAGGG +
Preference number: 5 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVPSLHH*AGTYKG
Trigger: CCCTTTGTAGGTGCCAGCCAAATGGTGCAGGGAGGG...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGAGCTGGGTCTCCTCGTaGCTCAGTTCCAGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEESWVSS*LSSSLP
Trigger: AGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCT...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCCTCTGTGTGGACAGTTaGGCTCCAGGGCACTGCCCA +
Preference number: 5 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTALCVDS*APGHCP
Trigger: TGGGCAGTGCCCTGGAGCCAAACTGTCCACACAGAG...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS GCA 90 bp AACTTCTTGAGCACGGCCACCTCCATCTTGAGGACCTGCTTGGGCTaGTGGGCTGACTCCACCTTGAGGGCCACATTCTCCCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: NFLSTATSILRTCLG*WADSTLRATFSLVS
Trigger: GCTGACCAGGGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTCAAGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS-3UTR CAA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGACATCCCCCGTGGTGTaGGTGTACTGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGTSPVV*VYCRAS
Trigger: GCTGGCCCGGCAGTACACCAACACCACGGGGGATGT...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCCCCTTCTTCCTCCCAGCTCCAAACCAGGGTGTTGTTGGTCCTGGGGCAGAGCGGAGTTTGTTCCGGTaGACATCTGTCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: APFFLPAPNQGVVGPGAERSLFR*TSVSSQ
Trigger: CTGGGAGGAGACAGATGTCAACCGGAACAAACTCCG...CTCTGCCCCAGGACCAACAACACCCTGGTTTGGAGCTGGGAGGAAGAAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GTGTCTTCACCACCGCCCTTGGGGCTGACCGAGCACCTACAGGAAGGAGTCACCCGGAGTTTGTTCCGGTaGACATCTGTCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VSSPPPLGLTEHLQEGVTRSLFR*TSVSSQ
Trigger: CTGGGAGGAGACAGATGTCAACCGGAACAAACTCCG...GGTGACTCCTTCCTGTAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGACCTGGAGGGAAGTCCTaGAGCTCCGTCTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: ATASKLGLLVAQFQPALGPGGKS*SSVSLS
Trigger: CGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAGG...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGACAAGCACCAGCGTTTaGGAGCCCTCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GSPREVWNPKGRLGFASLTSTSV*EPSSGS
Trigger: GGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTGT...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCGCAAGGGCCGGGCCATaGGGCAGTGAGTTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLARAGP*GSEFVA
Trigger: GGCCACAAACTCACTGCCCAATGGCCCGGCCCTTGC...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCGGCCAGGAGGTTGTTaGGGGCGGAGGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQERPGGC*GRRSAA
Trigger: TGCTGCTGACCTCCGCCCCAAACAACCTCCTGGCCG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTGCCGCGGCCAGGAGGTaGTTTGGGGCGGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSAAARR*FGAEVS
Trigger: GCTGACCTCCGCCCCAAACAACCTCCTGGCCGCGGC...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCATCAGGAAAGAGCAGGTaGGCTGGAACTGCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: SPHIHSWSRAAARAGVRASGKSR*AGTAVG
Trigger: GCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGA...TGCCCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 90 bp TTTCTCCGCAATGTGCACAAAGGTCCTCTCAACTTTGGTGAAGGGTaGGGAGGTGACTGCCACGCCCCCGACCCCTGTGGTCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: FLRNVHKGPLNFGEG*GGDCHAPDPCGHCP
Trigger: GGGACAGTGACCACAGGGGTCGGGGGCGTGGCAGTCACCTCCTCACCCTTCACCAAAGTTGAGAGGACCTTTGTGCACATTGCGGAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 90 bp TTCCCTTGCAACTTCTTGAGCACGGCCACCTCCATCTTGAGGACCTaGTTGGGCTGCTGGGCTGACTCCACCTTGAGGGCCACATTCTCC +
Preference number: 5 (lower is better)
Translates to: FPCNFLSTATSILRT*LGCWADSTLRATFS
Trigger: GGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 90 bp GTCTCTTTTGAAGTCCTGGTAGGGCAGACTCAGAGGCACAGCTCGTaGGAGGCCATTCACCTCAAATGGGGGCGCCACGGAGAACACCTG +
Preference number: 5 (lower is better)
Translates to: VSFEVLVGQTQRHSS*EAIHLKWGRHGEHL
Trigger: CAGGTGTTCTCCGTGGCGCCCCCATTTGAGGTGAATGGCCTCCCACGAGCTGTGCCTCTGAGTCTGCCCTACCAGGACTTCAAAAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGACGGCCACCTCCATCTaGAGGACCTGCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRTATSI*RTCLGC
Trigger: GCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGT...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGACATCCCCCGTGGTGTaGGTGTACTGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTETSPVV*VYCRAS
Trigger: GCTGGCCCGGCAGTACACCAACACCACGGGGGATGT...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GGACCCTCGCGGGGAGGCTGGAGCCTCCACTTCTGGAATTTGAGGCTGCTTCTCTTGAGCTCCGTCTCCTaGTCGATGATGACCCACTCT +
Preference number: 5 (lower is better)
Translates to: GPSRGGWSLHFWNLRLLLLSSVS*SMMTHS
Trigger: AGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAA...GAGAAGCAGCCTCAAATTCCAGAAGTGGAGGCTCCAGCCTCCCCGCGAGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGCTGCCCGGCCTTTGGTaGTTGCGCGCTGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTELPGLW*LRAEPG
Trigger: TCCAGGCTCAGCGCGCAACAACCAAAGGCCGGGCAG...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGCCTGGATGTCTTGGCTaGCTCTCTGTGACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRPGCLG*LSVTQG
Trigger: TCCCTGAGTCACAGAGAGCAAGCCAAGACATCCAGG...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGTCTTCACCACCGCCCTaGGGGCTGACCGAGCACCTA +
Preference number: 5 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRSSPPP*GLTEHL
Trigger: TAGGTGCTCGGTCAGCCCCAAGGGCGGTGGTGAAGA...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGTCCACACAGGGGCTTTaGCCGATGTTGATCCGGAGT +
Preference number: 5 (lower is better)
Translates to: GSPHTSYGSHRGSTQIWRSTQGL*PMLIRS
Trigger: ACTCCGGATCAACATCGGCAAAAGCCCCTGTGTGGA...CCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCCTGGAGGGAAGTCCTaGAGCTCCGTCTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLPGGKS*SSVSLS
Trigger: CGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAGG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GGGAGCCCTAGGGAGGTTTGGAATCCCAAGGGCAGACTGGGTTTTGCGTCTCTGCCGGAAGACATGACGTaGAGGTGGGTTTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: GSPREVWNPKGRLGFASLPEDMT*RWVFSA
Trigger: TGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGG...CAGAGACGCAAAACCCAGTCTGCCCTTGGGATTCCAAACCTCCCTAGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGGGGGCCAGCTGTCTGTaGGTCCACCTGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTEGASCL*VHLSLL
Trigger: GAGCAGAGACAGGTGGACCAACAGACAGCTGGCCCC...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCTTTGAACTCAGGAAAGAGCAGGTTGGCTGGAACTGCAGTAGGCAGGACTGAGTCAGGGTCAGCTGCCTaGTGGGCATCCTTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: ALNSGKSRLAGTAVGRTESGSAA*WASFRV
Trigger: CACCCGGAAGGATGCCCACAAGGCAGCTGACCCTGA...CTCAGTCCTGCCTACTGCAGTTCCAGCCAACCTGCTCTTTCCTGAGTTCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCACTGCTTCTAAGCTGGGTCTCCTCGTTGCTCAGTTCCAGCCTGCCTTGGGAACAGCACTGTGCAACTaGCGCACGTGCCAGTCACAT +
Preference number: 5 (lower is better)
Translates to: ATASKLGLLVAQFQPALGTALCN*RTCQSH
Trigger: ATGTGACTGGCACGTGCGCAAGTTGCACAGTGCTGT...TCCCAAGGCAGGCTGGAACTGAGCAACGAGGAGACCCAGCTTAGAAGCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCGAGGGCAACAGAGGCTaGGGTTTGGGGAGATTCAAA +
Preference number: 5 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTAEGNRG*GLGRFK
Trigger: TTTGAATCTCCCCAAACCCAAGCCTCTGTTGCCCTC...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS GCA 90 bp TGCAAATGTCATTCTGCCTCCAATCCGCCAGAAACTAAGCTCCGGTaGCAGGGGCCCCGAGGTTTCAGAGGAACACTCCTGTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: CKCHSASNPPETKLR*QGPRGFRGTLLSSP
Trigger: TGGCGAAGACAGGAGTGTTCCTCTGAAACCTCGGGGCCCCTGGCACCGGAGCTTAGTTTCTGGCGGATTGGAGGCAGAATGACATTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCCTCCCCCACTCATGTaGGTTTCGTCCTTAAGGGCG +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEPPPLM*VSSLRA
Trigger: CGCCCTTAAGGACGAAACCAACATGAGTGGGGGAGG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGACTCCAAGATCTGCTaGCCCAGCCGCAATGTGGTG +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEDSKIC*PSRNVV
Trigger: CACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGCAAAGTTTGAAGGCTaGATGTCACGGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRAKFEG*MSRCRK
Trigger: CTTCCTGCACCGTGACATCAAGCCTTCAAACTTTGC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGGCACTGGCGTCACATaGACCACCCCAAACATGGCT +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEGTGVT*TTPNMA
Trigger: AGCCATGTTTGGGGTGGTCAATGTGACGCCAGTGCC...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGCACTGGCGTCACATaGACCACCCCAAACATGGCT +
Preference number: 5 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRGTGVT*TTPNMA
Trigger: AGCCATGTTTGGGGTGGTCAATGTGACGCCAGTGCC...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCTCAGACCGCAAGGCTaGTCCACCGGAAGACATGAC +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQELRPQG*STGRHD
Trigger: GTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGAG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTACCACTTTCTCAGGGCTaGGCTCCAGCGGGGACACCG +
Preference number: 5 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLPLSQG*APAGTP
Trigger: CGGTGTCCCCGCTGGAGCCAAGCCCTGAGAAAGTGG...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGCTGCCTCTCACCGAGTaGTCCAGGATGGAGCCAACT +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQELPLTE*SRMEPT
Trigger: AGTTGGCTCCATCCTGGACAACTCGGTGAGAGGCAG...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAGGACGGAGACTCTGCTaGGGGTGGGAGTATTACAGT +
Preference number: 5 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAGRRLC*GWEYYS
Trigger: ACTGTAATACTCCCACCCCAAGCAGAGTCTCCGTCC...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CCTGAGGAGCCGAGGACAGACACCCAATCCTACCAGGGAGTGATGGCACAGGTGTGGATCACAGAGTGCTaGGTTTCATCCAACCCCAGA +
Preference number: 5 (lower is better)
Translates to: PEEPRTDTQSYQGVMAQVWITEC*VSSNPR
Trigger: TCTGGGGTTGGATGAAACCAAGCACTCTGTGATCCA...CACCTGTGCCATCACTCCCTGGTAGGATTGGGTGTCTGTCCTCGGCTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTTGGGCTGACTCCACCTaGAGGGCCACATTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSWADST*RATFSL
Trigger: CAGGGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCA...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTATCTTGAGGACCTGCTaGGGCTGCTGGGCTGACTCC +
Preference number: 5 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSILRTC*GCWADS
Trigger: GGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGAT...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GCCATACCACAATGGTGGCCCTCTGTGTGGACAGTTTGGCTCCAGGGCACTGCCTGCTCATACTTCTCCTaGATCATCCCTACCTGTTCC +
Preference number: 5 (lower is better)
Translates to: AIPQWWPSVWTVWLQGTACSYFS*IIPTCS
Trigger: GGAACAGGTAGGGATGATCAAGGAGAAGTATGAGCA...GGCAGTGCCCTGGAGCCAAACTGTCCACACAGAGGGCCACCATTGTGGTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AAGAGTCCCCACATCCATTCCTGGAGTAGAGCAGCTGCACGGGCTGGGGTCAGGGGAGGGAGTAAAACTTaGTTAAAGCCCCCTCCAACT +
Preference number: 5 (lower is better)
Translates to: KSPHIHSWSRAAARAGVRGGSKT*LKPPPT
Trigger: AGTTGGAGGGGGCTTTAACAAAGTTTTACTCCCTCC...CCTGACCCCAGCCCGTGCAGCTGCTCTACTCCAGGAATGGATGTGGGGACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCCTCAAAGGGTCCACCTaGACCCTCTCCTGCCTACTG +
Preference number: 5 (lower is better)
Translates to: WHFLELHSAQPEHSSMAALKGST*TLSCLL
Trigger: CAGTAGGCAGGAGAGGGTCAAGGTGGACCCTTTGAG...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATTGGGCTGACTCCACCTaGAGGGCCACATTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNWADST*RATFSL
Trigger: CAGGGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCA...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp TGGCACTTCCTGGAATTACACAGTGCACAGCCTGAGCATTCATCCATGGCAGCCCACATGGTCCTTCCCTaGCAACTTCTTGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: WHFLELHSAQPEHSSMAAHMVLP*QLLEHG
Trigger: GCCGTGCTCAAGAAGTTGCAAGGGAAGGACCATGTG...GGCTGCCATGGATGAATGCTCAGGCTGTGCACTGTGTAATTCCAGGAAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGTTGAGCTCCGTCTCCTaGTCGATGATGACCCACTCT +
Preference number: 5 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGLSSVS*SMMTHS
Trigger: AGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAA...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AATACTTGCCCAGGAAGGCAGCCCACACACTTCCTATGGTTCCCACAGAGGCTCCAGTCTCCACCTGCTTaGAACTCAGGAAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NTCPGRQPTHFLWFPQRLQSPPA*NSGKSR
Trigger: CCTGCTCTTTCCTGAGTTCAAAGCAGGTGGAGACTG...GAGCCTCTGTGGGAACCATAGGAAGTGTGTGGGCTGCCTTCCTGGGCAAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGAGTATTACAGTACCTaGGGCCAACGTTCTAGGGGG +
Preference number: 5 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAEYYST*GQRSRG
Trigger: CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTC...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGACTCTGCTTGGGGTGGGAGTATTACAGTACCTTGGGCCAACGTTCTAGGGGGGAGACATCTGGGGAATaGATGGGCCAAGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: RLCLGWEYYSTLGQRSRGETSGE*MGQAEV
Trigger: AACCTCTGCTTGGCCCATCAATTCCCCAGATGTCTC...CCCCCTAGAACGTTGGCCCAAGGTACTGTAATACTCCCACCCCAAGCAGAGTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp ACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTGACATGGGCAATGGAGAAGGTGCTCTaGGCCCAGACATCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TSLLPHSPGEQRCWLTWAMEKVL*AQTSSK
Trigger: TTTTGAGGATGTCTGGGCCAAGAGCACCTTCTCCAT...TGCCCATGTCAGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CCCTCTCCTGCCTACTGCCTGAGCAGGGTGCAAAGCCATCCAAAACAGCCCAGAACCCAAATCTGGCTTTaGTTGCCAGATGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: PSPAYCLSRVQSHPKQPRTQIWL*LPDGEG
Trigger: ACCTTCTCCATCTGGCAACAAAAGCCAGATTTGGGT...TCTGGGCTGTTTTGGATGGCTTTGCACCCTGCTCAGGCAGTAGGCAGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 90 bp TCCTCAGACCGCAAGGCTTGTCCACCGGAAGACATGACGTTGAGGTaGGTTTTCTCCGCAATGTGCACAAAGGTCCTCTCAACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SSDRKACPPEDMTLR*VFSAMCTKVLSTLV
Trigger: CACCAAAGTTGAGAGGACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp ACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGGTTTCTCACATGGTCCTTCCCTaGCAACTTCTTGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: TSYGSHRGSTQIWRQEVSHMVLP*QLLEHG
Trigger: GCCGTGCTCAAGAAGTTGCAAGGGAAGGACCATGTG...AGAAACCTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp CATACAGGCACGGCCCTTTCTAGTACCCACTTCACTACTACCGCATTCCCCAGGATGATGACCCACTCTTaGCTGTCGAAATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HTGTALSSTHFTTTAFPRMMTHS*LSKSSS
Trigger: GGAGGAGGATTTCGACAGCAAAGAGTGGGTCATCAT...CCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGAAAGGGCCGTGCCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp TGCCTTGGGAGGTGGATCCCAGGCCCCTCTCATCCATCCTCAGTTCCTGAGGAGCCACTTCCAAAGGCGTaGGAAACAGTAATATGTATG +
Preference number: 5 (lower is better)
Translates to: CLGRWIPGPSHPSSVPEEPLPKA*ETVICM
Trigger: CATACATATTACTGTTTCCAACGCCTTTGGAAGTGG...CTCCTCAGGAACTGAGGATGGATGAGAGGGGCCTGGGATCCACCTCCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS GCA 90 bp AGGAAGAGGTGGAACTCTGACGGCATGTGCTTCAGCAGCATCCGGTaGTCATACTTCTCCTTGATCATCCCTACCTGTTCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RKRWNSDGMCFSSIR*SYFSLIIPTCSLSL
Trigger: CAAGGACAAGGAACAGGTAGGGATGATCAAGGAGAAGTATGAGCACCGGATGCTGCTGAAGCACATGCCGTCAGAGTTCCACCTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 90 bp TGTCCACCGGAAGACATGACGTTGAGGTGGGTTTTCTCCGCAATGTaGACAAAGGTCCTCTCAACTTTGGTGAAGGGTGAGGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: CPPEDMTLRWVFSAM*TKVLSTLVKGEEVT
Trigger: AGTCACCTCCTCACCCTTCACCAAAGTTGAGAGGACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACGACTCCAAGATCTGCTaGCCCAGCCGCAATGTGGTG +
Preference number: 5 (lower is better)
Translates to: GCPPKGQHALNHGLALKDDSKIC*PSRNVV
Trigger: CACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTC...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACCCCATCTCCCGGTTCTaGTGGGCATTGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GCPPKGQHALNHGLALKDPISRF*WALTEA
Trigger: TGCCTCAGTCAATGCCCACAAGAACCGGGAGATGGG...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CCACACACTTCCTATGGTTCCCACAGAGGCTCCACCCAAATCTGGAGGCAAGAGATGTTGATCCGGAGTTaGTTCCGGTTGACATCTGTC +
Preference number: 5 (lower is better)
Translates to: PHTSYGSHRGSTQIWRQEMLIRS*FRLTSV
Trigger: GACAGATGTCAACCGGAACAAACTCCGGATCAACAT...CTCTTGCCTCCAGATTTGGGTGGAGCCTCTGTGGGAACCATAGGAAGTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TCTAGTACCCACTTCACTACTACCGCATTCCCCAGGGGAACAGAGGTGCTGGCTATGTTGATCCGGAGTTaGTTCCGGTTGACATCTGTC +
Preference number: 5 (lower is better)
Translates to: SSTHFTTTAFPRGTEVLAMLIRS*FRLTSV
Trigger: GACAGATGTCAACCGGAACAAACTCCGGATCAACAT...AGCCAGCACCTCTGTTCCCCTGGGGAATGCGGTAGTAGTGAAGTGGGTACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGCCGCCTTCTCAATGCTGGATCTCCCACTTCCAAAGGCGTTGGAAACAGTAATGGGCTTTTGCCGATGTaGATCCGGAGTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: SRLLNAGSPTSKGVGNSNGLLPM*IRSLFR
Trigger: CCGGAACAAACTCCGGATCAACATCGGCAAAAGCCC...ATTACTGTTTCCAACGCCTTTGGAAGTGGGAGATCCAGCATTGAGAAGGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp CTCAAGCATACAATCTGGAAGTTAGAAGGGCCTTTCTGCCTCCAGGGGCCAGCTATGATGACCCACTCTTaGCTGTCGAAATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKHTIWKLEGPFCLQGPAMMTHS*LSKSSS
Trigger: GGAGGAGGATTTCGACAGCAAAGAGTGGGTCATCAT...AGCTGGCCCCTGGAGGCAGAAAGGCCCTTCTAACTTCCAGATTGTATGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp GTCCACAGGCTTTTTAATGGTGTGATGGCTACTTCCCTTCCGAGACCCGATCTAAAGGTCCTCTCAACTTaGGTGAAGGGTGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VHRLFNGVMATSLPRPDLKVLST*VKGEEV
Trigger: CACCTCCTCACCCTTCACCAAAGTTGAGAGGACCTT...TAGATCGGGTCTCGGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS-3UTR CAA 90 bp TCATCCTTAACAACCACCTTAGCTGCCACTGCTTCTAAGCTGGGTCTCCTCGTTCAAATCTGGCTTTTGTaGCCAGATGGAGAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SSLTTTLAATASKLGLLVQIWLL*PDGEGA
Trigger: AGCACCTTCTCCATCTGGCAACAAAAGCCAGATTTG...AACGAGGAGACCCAGCTTAGAAGCAGTGGCAGCTAAGGTGGTTGTTAAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATTCCCTTGCAACTTCTaGAGCACGGCCACCTCCATC +
Preference number: 5 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKFPCNF*STATSI
Trigger: GATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGAA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAATCCACACAGGGGCTTTaGCCGATGTTGATCCGGAGT +
Preference number: 5 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKSTQGL*PMLIRS
Trigger: ACTCCGGATCAACATCGGCAAAAGCCCCTGTGTGGA...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAAGCAAAGTTTGAAGGCTaGATGTCACGGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKAKFEG*MSRCRK
Trigger: CTTCCTGCACCGTGACATCAAGCCTTCAAACTTTGC...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp GGATGTCCCCCTAAAGGACAACATGCTTTGAACCATGGCCTTGCTTTAAAGGACAAAGGACAACATGCTTaGAACCATGGCCTTGCTTTA +
Preference number: 5 (lower is better)
Translates to: GCPPKGQHALNHGLALKDKGQHA*NHGLAL
Trigger: TAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTT...GTCCTTTAAAGCAAGGCCATGGTTCAAAGCATGTTGTCCTTTAGGGGGACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS-3UTR CAA 90 bp AGAGCTTTATGGCTTACAAAACACTCTCCCCTCCACCATGGAGGATATACAAAACCTGAGACACTGGTTTaGCTGACAAGCACATGGTTT +
Preference number: 5 (lower is better)
Translates to: RALWLTKHSPLHHGGYTKPETLV*LTSTWF
Trigger: AAACCATGTGCTTGTCAGCAAAACCAGTGTCTCAGG...TTTTGTATATCCTCCATGGTGGAGGGGAGAGTGTTTTGTAAGCCATAAAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CAA 90 bp CCGGCTTGGGCTCGCCCTGGGCCCAGGCCGCGGCCAGGAGGTTGTTaGGGGCGGAGGTCAGCAGCAGTGGCCGACCCTGGGGGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: PAWARPGPRPRPGGC*GRRSAAVADPGGVC
Trigger: GCAGACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCCGCCCCAAACAACCTCCTGGCCGCGGCCTGGGCCCAGGGCGAGCCCAAGCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp GGCTCCGGCTTGGGCTCGCCCTGGGCCCAGGCCGCGGCCAGGAGGTaGTTTGGGGCGGAGGTCAGCAGCAGTGGCCGACCCTGGGGGCGT +
Preference number: 6 (lower is better)
Translates to: GSGLGSPWAQAAARR*FGAEVSSSGRPWGR
Trigger: ACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCCGCCCCAAACAACCTCCTGGCCGCGGCCTGGGCCCAGGGCGAGCCCAAGCCGGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GGCGGCTGCCCTCCCGCTCTTCCTGGGCAAGGCCGCTaGCGGCTCAGAGGCGGGCGTGTCCTCCTCAGAGCC +
Preference number: 6 (lower is better)
Translates to: GGCPPALPGQGR*RLRGGRVLLRA
Trigger: GGCTCTGAGGAGGACACGCCCGCCTCTGAGCCGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp TCCGGCTCCTGGTGGCGGCTGCCCTCCCGCTCTTCCTaGGCAAGGCCGCTGCCGGCTCAGAGGCGGGCGTGT +
Preference number: 6 (lower is better)
Translates to: SGSWWRLPSRSS*ARPLPAQRRAC
Trigger: ACACGCCCGCCTCTGAGCCGGCAGCGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp TCCAGCTGGCTGCCCGTGGGCTGGGGCCGCTCATGCTaGGGAGTGAGGGCAGCCAGGGTGCCCAGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: SSWLPVGWGRSC*GVRAARVPRSG
Trigger: CCCCGACCTGGGCACCCTGGCTGCCCTCACTCCTCAGCATGAGCGGCCCCAGCCCACGGGCAGCCAGCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CATCCGCCAGCCAGAGGGAGGGGTGTCCGCCGGGCCTaGCCTGAGGGGGCCATCTACCTGCTCTGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: HPPARGRGVRRA*PEGAIYLLCAR
Trigger: GCGGGCACAGAGCAGGTAGATGGCCCCCTCAGGGCAGGCCCGGCGGACACCCCTCCCTCTGGCTGGCGGATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GCAAATGCTGCAGGTCCTCCTCCGCCAGCGCCTGCATaGTGCGTCCCCGGGGCCGGACGGTGGGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ANAAGPPPPAPA*CVPGAGRWALP
Trigger: GGGCAGAGCCCACCGTCCGGCCCCGGGGACGCAGCATGCAGGCGCTGGCGGAGGAGGACCTGCAGCATTTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp TGCGGAGGCCAATGGGGCGGGGAATCCGGCTCCTGGTaGCGGCTGCCCTCCCGCTCTTCCTGGGCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: CGGQWGGESGSW*RLPSRSSWARP
Trigger: CGGCCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp GGCATGAGTCTGTGGTTGCCAGCAGCGAGGGGCGCGTaGCGCCGGTGGGGCGCCCGCACAGGGCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: GMSLWLPAARGA*RRWGARTGLLS
Trigger: TGAGAGCAGCCCTGTGCGGGCGCCCCACCGGCGCCACGCGCCCCTCGCTGCTGGCAACCACAGACTCATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CAA 90 bp AGCTGGGACCGCGAGATGCGGAGCACCGAGGGCATGAGTCTGTGGTaGCCAGCAGCGAGGGGCGCGTGGCGCCGGTGGGGCGCCCGCACA +
Preference number: 6 (lower is better)
Translates to: SWDREMRSTEGMSLW*PAARGAWRRWGART
Trigger: TGTGCGGGCGCCCCACCGGCGCCACGCGCCCCTCGCTGCTGGCAACCACAGACTCATGCCCTCGGTGCTCCGCATCTCGCGGTCCCAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 72 bp CGGGCAGTGGCCGCAGCTCCTCGGGCTCCTCATCCGTaGTGCCCGATGTGCTGGGCTCAGCCCCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RAVAAAPRAPHP*CPMCWAQPLEG
Trigger: TCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGGATGAGGAGCCCGAGGAGCTGCGGCCACTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp GGGGCGCCACGGAGAACACCTGTCTCTGTGGGCCTGTaGGGTCCGACTCTCTCCGTCGAGGGCGGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: GAPRRTPVSVGL*GPTLSVEGGVP
Trigger: CGGGACCCCGCCCTCGACGGAGAGAGTCGGACCCCACAGGCCCACAGAGACAGGTGTTCTCCGTGGCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp GCATGCGGAGGCCAATGGGGCGGGGAATCCGGCTCCTaGTGGCGGCTGCCCTCCCGCTCTTCCTGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: ACGGQWGGESGS*WRLPSRSSWAR
Trigger: CCTTGCCCAGGAAGAGCGGGAGGGCAGCCGCCACCAGGAGCCGGATTCCCCGCCCCATTGGCCTCCGCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp CGCGCCAGGTCCTGCTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTaGGCCGACAGTGAGCCTGAGGGCTCCGAGCCCGTGTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RARSCCGRARLLHRS*ADSEPEGSEPVSSS
Trigger: TGAGGAGGACACGGGCTCGGAGCCCTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGGACCTGGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp CCATCGGCCATGGAGGCCCGGCCCCTGGACTCCTTCTaGTCGTCTGCCAGCAGCGTGGACGGGGCACCCTCC +
Preference number: 6 (lower is better)
Translates to: PSAMEARPLDSF*SSASSVDGAPS
Trigger: GGAGGGTGCCCCGTCCACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGGCCGGGCCTCCATGGCCGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CATGGAGGCCCGGCCCCTGGACTCCTTCTGATCGTCTaGCAGCAGCGTGGACGGGGCACCCTCCTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: HGGPAPGLLLIV*QQRGRGTLLAP
Trigger: CGGAGCCAGGAGGGTGCCCCGTCCACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGGCCGGGCCTCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GAGCCCGTGCCTGAGAGGGTCTCAGAGGCACGGCGCTaGTCCTCACTGGAGGAGGACGAGGCCCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: EPVPERVSEARR*SSLEEDEAPEA
Trigger: GGCCTCAGGGGCCTCGTCCTCCTCCAGTGAGGAGCAGCGCCGTGCCTCTGAGACCCTCTCAGGCACGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CCGGCTCAGAGGCGGGCGTGTCCTCCTCAGAGCCCGTaGCTGAGAGGGTCTCAGAGGCACGGCGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: PAQRRACPPQSP*LRGSQRHGAAP
Trigger: AGGAGCAGCGCCGTGCCTCTGAGACCCTCTCAGGCACGGGCTCTGAGGAGGACACGCCCGCCTCTGAGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp CGCAATGTGGTGCTCAGCGTGAAGGTGCCTCGCGGCTaGCTACGGCGCAGGTCGGCCAGGTTCCGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: RNVVLSVKVPRG*LRRRSARFRPW
Trigger: CCAGGGCCGGAACCTGGCCGACCTGCGCCGTAGCCAGCCGCGAGGCACCTTCACGCTGAGCACCACATTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp CCGAGTGCAGGGGTGAGTGGGAAGGGCTGCCAGGCGTaGGGGGCTGTGACGTCTCGGAACGGCCATCGCCCT +
Preference number: 6 (lower is better)
Translates to: PSAGVSGKGCQA*GAVTSRNGHRP
Trigger: AGGGCGATGGCCGTTCCGAGACGTCACAGCCCCCCACGCCTGGCAGCCCTTCCCACTCACCCCTGCACTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp CCTGCTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTTaGCCGACAGTGAGCCTGAGGGCTCCGAGCCCGTGT +
Preference number: 6 (lower is better)
Translates to: PAAAEPACSTAL*PTVSLRAPSPC
Trigger: ACACGGGCTCGGAGCCCTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp GGGATCTGCTGGCGGGCTGCTGGGCTGCAACAGGCATaGGCATGCGGAGGCCAATGGGGCGGGGAATCCGGC +
Preference number: 6 (lower is better)
Translates to: GICWRAAGLQQA*ACGGQWGGESG
Trigger: GCCGGATTCCCCGCCCCATTGGCCTCCGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 72 bp TCCTGCTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTaGGCCGACAGTGAGCCTGAGGGCTCCGAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SCCGRARLLHRS*ADSEPEGSEPV
Trigger: CACGGGCTCGGAGCCCTCAGGCTCACTGTCGGCCAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GCAGTGGCCGCAGCTCCTCGGGCTCCTCATCCGTGGTaGCCGATGTGCTGGGCTCAGCCCCTGGAGGGAAGT +
Preference number: 6 (lower is better)
Translates to: AVAAAPRAPHPW*PMCWAQPLEGS
Trigger: ACTTCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGGATGAGGAGCCCGAGGAGCTGCGGCCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp CCCTGCCTCTTCTCCATCACCAGCCGCGCCAGGTCCTaGTGCGGCCGAGCCCGCTTGCTCCACCGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PCLFSITSRARS*CGRARLLHRSL
Trigger: CAAAGAGCGGTGGAGCAAGCGGGCTCGGCCGCAGCAGGACCTGGCGCGGCTGGTGATGGAGAAGAGGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp AATGCTGGGGCCGCGCCATGGGATCTGCTGGCGGGCTaGTGGGCTGCAACAGGCATGGGCATGCGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: NAGAAPWDLLAG*WAATGMGMRRP
Trigger: TGGCCTCCGCATGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCCATGGCGCGGCCCCAGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp ACCCGGCCACATTCCGAGGGGGCCGCACATCCCCCGTaGTGTTGGTGTACTGCCGGGCCAGCCCGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: TRPHSEGAAHPP*CWCTAGPARSP
Trigger: TGGACTTCGGGCTGGCCCGGCAGTACACCAACACCACGGGGGATGTGCGGCCCCCTCGGAATGTGGCCGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp GGCCCCTGGACTCCTTCTGATCGTCTGCCAGCAGCGTaGACGGGGCACCCTCCTGGCTCCGGTCAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: GPWTPSDRLPAA*TGHPPGSGQCS
Trigger: GGAGCACTGACCGGAGCCAGGAGGGTGCCCCGTCCACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp GCTCCAGGTCCCCATCGGCCATGGAGGCCCGGCCCCTaGACTCCTTCTGATCGTCTGCCAGCAGCGTGGACG +
Preference number: 6 (lower is better)
Translates to: APGPHRPWRPGP*TPSDRLPAAWT
Trigger: CGTCCACGCTGCTGGCAGACGATCAGAAGGAGTCCAGGGGCCGGGCCTCCATGGCCGATGGGGACCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp CTCAGAGGCGGGCGTGTCCTCCTCAGAGCCCGTGCCTaGGAGGGTCTCAGAGGCACGGCGCTGCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: LRGGRVLLRARA*EGLRGTALLLT
Trigger: AGTGAGGAGCAGCGCCGTGCCTCTGAGACCCTCTCAGGCACGGGCTCTGAGGAGGACACGCCCGCCTCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GCCACTACGAGGCCCCAGCACCTCCCCCAAGGCAACTaGCGCTGCAGCCTCCTCCTCCTCTTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: ATTRPQHLPQGN*RCSLLLLFLLL
Trigger: GAGGAGGAGGAAGAGGAGGAGGAGGCTGCAGCGGCAGTTGCCTTGGGGGAGGTGCTGGGGCCTCGTAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp GCAGCGTGGACGGGGCACCCTCCTGGCTCCGGTCAGTaGTCCTCTCACTCCCCTCACTGCTGGAGCCACTAC +
Preference number: 6 (lower is better)
Translates to: AAWTGHPPGSGQ*SSHSPHCWSHY
Trigger: GTAGTGGCTCCAGCAGTGAGGGGAGTGAGAGGAGCACTGACCGGAGCCAGGAGGGTGCCCCGTCCACGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp TGGCTGTGTCCAATGCTGGGGCCGCGCCATGGGATCTaGTGGCGGGCTGCTGGGCTGCAACAGGCATGGGCA +
Preference number: 6 (lower is better)
Translates to: WLCPMLGPRHGI*WRAAGLQQAWA
Trigger: TGCCCATGCCTGTTGCAGCCCAGCAGCCCGCCAGCAGATCCCATGGCGCGGCCCCAGCATTGGACACAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CTGCAGCTGGAGCCTGCTGGTGATGGCTGTGTCCAATaGTGGGGCCGCGCCATGGGATCTGCTGGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LQLEPAGDGCVQ*WGRAMGSAGGL
Trigger: CAGCCCGCCAGCAGATCCCATGGCGCGGCCCCAGCATTGGACACAGCCATCACCAGCAGGCTCCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CCGGCCCTCCGCGCCTCCTGCCCGGCCTTTGGTTGTTaGGCGCTGAGCCTGGAGTTTCCCTCTGGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PALRASCPAFGC*ALSLEFPSGSF
Trigger: AAAGGACCCAGAGGGAAACTCCAGGCTCAGCGCGCAACAACCAAAGGCCGGGCAGGAGGCGCGGAGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp CAGCTGGAGCCTGCTGGTGATGGCTGTGTCCAATGCTaGGGCCGCGCCATGGGATCTGCTGGCGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QLEPAGDGCVQC*GRAMGSAGGLL
Trigger: CAGCAGCCCGCCAGCAGATCCCATGGCGCGGCCCCAGCATTGGACACAGCCATCACCAGCAGGCTCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp TTGTTTGGGGCGGAGGTCAGCAGCAGTGGCCGACCCTaGGGGCGTCTGCAGCTGGAGCCTGCTGGTGATGGC +
Preference number: 6 (lower is better)
Translates to: LFGAEVSSSGRP*GRLQLEPAGDG
Trigger: GCCATCACCAGCAGGCTCCAGCTGCAGACGCCCCCAGGGTCGGCCACTGCTGCTGACCTCCGCCCCAAACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp CGCCGCCGGGGTGAGGGTAATGCTCCGTCTCCAGCGTaGAGGAGGAGAACACGGAGGACGCCAGTCGTCGCA +
Preference number: 6 (lower is better)
Translates to: RRRGEGNAPSPA*RRRTRRTPVVA
Trigger: TGCGACGACTGGCGTCCTCCGTGTTCTCCTCCTCCACGCTGGAGACGGAGCATTACCCTCACCCCGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS TCA 72 bp GGGTGCCCAGGTCGGGGTCGGGGGCCAGTTCGGCAGTaGCGGGCGACTTCTTCATGTCGCCAGGAGAGACAA +
Preference number: 6 (lower is better)
Translates to: GCPGRGRGPVRQ*RATSSCRQERQ
Trigger: TTGTCTCTCCTGGCGACATGAAGAAGTCGCCCGTCACTGCCGAACTGGCCCCCGACCCCGACCTGGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp ATGTTGGTTTCGTCCTTAAGGGCGGCCGCTAGGCACTaGATCCGCCAGCCAGAGGGAGGGGTGTCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: MLVSSLRAAARH*IRQPEGGVSAG
Trigger: CCCGGCGGACACCCCTCCCTCTGGCTGGCGGATGCAGTGCCTAGCGGCCGCCCTTAAGGACGAAACCAACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp TCAGGGCCTCCTGCTCCACAGAGGCTGACACGTCCATaGGGCCACTGGCCTGTCGGTCAGCGTGGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: SGPPAPQRLTRP*GHWPVGQRGLC
Trigger: ACACAGGCCACGCTGACCGACAGGCCAGTGGCCGCATGGACGTGTCAGCCTCTGTGGAGCAGGAGGCCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp GCCAGTCGTCGCAGGGGGCTGTACCGCGGGAGGGAGTaGCCCGAGAGTCTGTCCTCCTCCAACTGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: ASRRRGLYRGRE*PESLSSSNCLC
Trigger: ACAGAGACAGTTGGAGGAGGACAGACTCTCGGGGCACTCCCTCCCGCGGTACAGCCCCCTGCGACGACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CCA 72 bp ACCCCAAACATGGCTGCCGTCTGCCGGGTGTTCTGCTaGGGCGGGGTAGAGGTGCTCGTGGACAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: TPNMAAVCRVFC*GGVEVLVDRRA
Trigger: TGCCCTCCTGTCCACGAGCACCTCTACCCCGCCCCAGCAGAACACCCGGCAGACGGCAGCCATGTTTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp AGAGTCTGTCCTCCTCCAACTGTCTCTGTGGGCCTGTaGGGTCCGACTCTCTCCGTCGAGGGCGGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: RVCPPPTVSVGL*GPTLSVEGGVP
Trigger: CGGGACCCCGCCCTCGACGGAGAGAGTCGGACCCCACAGGCCCACAGAGACAGTTGGAGGAGGACAGACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CAA 72 bp GCCACATTCCGAGGGGGCCGCACATCCCCCGTGGTGTaGGTGTACTGCCGGGCCAGCCCGAAGTCCAGCATA +
Preference number: 6 (lower is better)
Translates to: ATFRGGRTSPVV*VYCRASPKSSI
Trigger: TATGCTGGACTTCGGGCTGGCCCGGCAGTACACCAACACCACGGGGGATGTGCGGCCCCCTCGGAATGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 72 bp GACACCGGGGCTGGCCCGTCTGCAAGGGCCGGGCCATaGGGCAGTGAGTTTGTGGCCATCTCTGAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: DTGAGPSARAGP*GSEFVAISEGV
Trigger: AACCCCCTCAGAGATGGCCACAAACTCACTGCCCAATGGCCCGGCCCTTGCAGACGGGCCAGCCCCGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp CTGTCGAAATCCTCCTCCTCAGCCAGCGGCACCGAGCGGAAGGCGTaGCTCAGGGCCTCCTGCTCCACAGAGGCTGACACGTCCATGCGG +
Preference number: 6 (lower is better)
Translates to: LSKSSSSASGTERKA*LRASCSTEADTSMR
Trigger: CCGCATGGACGTGTCAGCCTCTGTGGAGCAGGAGGCCCTGAGCAACGCCTTCCGCTCGGTGCCGCTGGCTGAGGAGGAGGATTTCGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp CCACATTCCGAGGGGGCCGCACATCCCCCGTGGTGTTaGTGTACTGCCGGGCCAGCCCGAAGTCCAGCATAT +
Preference number: 6 (lower is better)
Translates to: PHSEGAAHPPWC*CTAGPARSPAY
Trigger: ATATGCTGGACTTCGGGCTGGCCCGGCAGTACACCAACACCACGGGGGATGTGCGGCCCCCTCGGAATGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp ACACCGGGGCTGGCCCGTCTGCAAGGGCCGGGCCATTaGGCAGTGAGTTTGTGGCCATCTCTGAGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: TPGLARLQGPGH*AVSLWPSLRGF
Trigger: AAACCCCCTCAGAGATGGCCACAAACTCACTGCCCAATGGCCCGGCCCTTGCAGACGGGCCAGCCCCGGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp GCAGCATGTGCGAGAAGCCCACCCTCCGGACCCTGTTaGGCAACCGCGCCCGTTCTCGGTAATCGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: AACARSPPSGPC*ATAPVLGNRRG
Trigger: ACCTCTCCGATTACCGAGAACGGGCGCGGTTGCTCAACAGGGTCCGGAGGGTGGGCTTCTCGCACATGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp TCCGCGCCTCCTGCCCGGCCTTTGGTTGTTGCGCGCTaGGCCTGGAGTTTCCCTCTGGGTCCTTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SAPPARPLVVAR*AWSFPLGPFLE
Trigger: CTCCAAGAAAGGACCCAGAGGGAAACTCCAGGCTCAGCGCGCAACAACCAAAGGCCGGGCAGGAGGCGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp CAGAGGCACAGCTCGTGGGAGGCCATTCACCTCAAATaGGGGCGCCACGGAGAACACCTGTCTCTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: QRHSSWEAIHLK*GRHGEHLSLWA
Trigger: GGCCCACAGAGACAGGTGTTCTCCGTGGCGCCCCCATTTGAGGTGAATGGCCTCCCACGAGCTGTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CCA 72 bp CTTGGGCTCAGACTTGAGGACAGAGGACAGGGTGCCTaGCTCAGATACGTCCAGCTGGCTGCCCGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: LGLRLEDRGQGA*LRYVQLAARGL
Trigger: CAGCCCACGGGCAGCCAGCTGGACGTATCTGAGCCAGGCACCCTGTCCTCTGTCCTCAAGTCTGAGCCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp ACGGGCGACTTCTTCATGTCGCCAGGAGAGACAAGCACCAGCGTTTaGGAGCCCTCCTCAGGCTCCAGGTCCCCATCGGCCATGGAGGCC +
Preference number: 6 (lower is better)
Translates to: TGDFFMSPGETSTSV*EPSSGSRSPSAMEA
Trigger: GGCCTCCATGGCCGATGGGGACCTGGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTGTCTCTCCTGGCGACATGAAGAAGTCGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp AGGAAGCCCACAGAGTGGATGGCCTCGATGGACTCCAAGATCTGCTaGCCCAGCCGCAATGTGGTGCTCAGCGTGAAGGTGCCTCGCGGC +
Preference number: 6 (lower is better)
Translates to: RKPTEWMASMDSKIC*PSRNVVLSVKVPRG
Trigger: GCCGCGAGGCACCTTCACGCTGAGCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACTCTGTGGGCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS TCA 72 bp CGTCGTGGCGGCCCATCTCCCGGTTCTTGTGGGCATTaGCTGAGGCATAGCGAACCGTTCCTCGAAACCCGG +
Preference number: 6 (lower is better)
Translates to: RRGGPSPGSCGH*LRHSEPFLETR
Trigger: CCGGGTTTCGAGGAACGGTTCGCTATGCCTCAGTCAATGCCCACAAGAACCGGGAGATGGGCCGCCACGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp AGCACGGCCACCTCCATCTTGAGGACCTGCTTGGGCTaGTGGGCTGACTCCACCTTGAGGGCCACATTCTCC +
Preference number: 6 (lower is better)
Translates to: STATSILRTCLG*WADSTLRATFS
Trigger: GGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp GAAGTCCTGGTAGGGCAGACTCAGAGGCACAGCTCGTaGGAGGCCATTCACCTCAAATGGGGGCGCCACGGA +
Preference number: 6 (lower is better)
Translates to: EVLVGQTQRHSS*EAIHLKWGRHG
Trigger: TCCGTGGCGCCCCCATTTGAGGTGAATGGCCTCCCACGAGCTGTGCCTCTGAGTCTGCCCTACCAGGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp TCCGTGGTGCCCGATGTGCTGGGCTCAGCCCCTGGAGGGAAGTCCTaGAGCTCCGTCTCCTTGTCGATGATGACCCACTCTTTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SVVPDVLGSAPGGKS*SSVSLSMMTHSLLS
Trigger: CGACAGCAAAGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAGGGGCTGAGCCCAGCACATCGGGCACCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS TCA 72 bp CGCCCCCGATCTTTTTCAGCACCTTCCAGCGATCCTTaGCCACGTAGTTGGCCGGCAGGATGTCGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: RPRSFSAPSSDP*PRSWPAGCRPA
Trigger: AGCAGGCCGACATCCTGCCGGCCAACTACGTGGTCAAGGATCGCTGGAAGGTGCTGAAAAAGATCGGGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp CACCTCCATCTTGAGGACCTGCTTGGGCTGCTGGGCTaGCTCCACCTTGAGGGCCACATTCTCCCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: HLHLEDLLGLLG*LHLEGHILPGQ
Trigger: CTGACCAGGGAGAATGTGGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp AACTTCTTGAGCACGGCCACCTCCATCTTGAGGACCTaGTTGGGCTGCTGGGCTGACTCCACCTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: NFLSTATSILRT*LGCWADSTLRA
Trigger: GGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTCAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp TCTTCATGTCGCCAGGAGAGACAAGCACCAGCGTTTTaGAGCCCTCCTCAGGCTCCAGGTCCCCATCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSCRQERQAPAF*SPPQAPGPHRP
Trigger: TGGCCGATGGGGACCTGGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTGTCTCTCCTGGCGACATGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 72 bp CCCGATGTGCTGGGCTCAGCCCCTGGAGGGAAGTCCTaGAGCTCCGTCTCCTTGTCGATGATGACCCACTCT +
Preference number: 6 (lower is better)
Translates to: PDVLGSAPGGKS*SSVSLSMMTHS
Trigger: AGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAAGGACTTCCCTCCAGGGGCTGAGCCCAGCACATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 72 bp TTCTTCATGTCGCCAGGAGAGACAAGCACCAGCGTTTaGGAGCCCTCCTCAGGCTCCAGGTCCCCATCGGCC +
Preference number: 6 (lower is better)
Translates to: FFMSPGETSTSV*EPSSGSRSPSA
Trigger: GGCCGATGGGGACCTGGAGCCTGAGGAGGGCTCCAAAACGCTGGTGCTTGTCTCTCCTGGCGACATGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp ACATGGTCCTTCCCTTGCAACTTCTTGAGCACGGCCACCTCCATCTaGAGGACCTGCTTGGGCTGCTGGGCTGACTCCACCTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: TWSFPCNFLSTATSI*RTCLGCWADSTLRA
Trigger: GGCCCTCAAGGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGAAGGACCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 90 bp CAGACCCAGCTCGCCCCCAGCGCTGAACTCCTCAGACCGCAAGGCTaGTCCACCGGAAGACATGACGTTGAGGTGGGTTTTCTCCGCAAT +
Preference number: 6 (lower is better)
Translates to: QTQLAPSAELLRPQG*STGRHDVEVGFLRN
Trigger: ATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGAGGAGTTCAGCGCTGGGGGCGAGCTGGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp CCCACAGAGTGGATGGCCTCGATGGACTCCAAGATCTaGTTGCCCAGCCGCAATGTGGTGCTCAGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: PTEWMASMDSKI*LPSRNVVLSVK
Trigger: CTTCACGCTGAGCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp GGTAGAGGTGCTCGTGGACAGGAGGGCATCGGTGCCTaGCTTCTCCCAGTCAAAGGCCTCATTCTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: GRGARGQEGIGA*LLPVKGLILGN
Trigger: ATTGCCGAGAATGAGGCCTTTGACTGGGAGAAGGCAGGCACCGATGCCCTCCTGTCCACGAGCACCTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp GGCAGAATTGGGGGTGCATTCTCCTGGTCACTCAGGTaGTCTCCCTGTAGCACATCCTCGGTGTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GRIGGAFSWSLR*SPCSTSSVFSR
Trigger: CCGGGAGAACACCGAGGATGTGCTACAGGGAGAGCACCTGAGTGACCAGGAGAATGCACCCCCAATTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp CATTCTGCCTCCAATCCGCCAGAAACTAAGCTCCGGTaGCAGGGGCCCCGAGGTTTCAGAGGAACACTCCTG +
Preference number: 6 (lower is better)
Translates to: HSASNPPETKLR*QGPRGFRGTLL
Trigger: CAGGAGTGTTCCTCTGAAACCTCGGGGCCCCTGGCACCGGAGCTTAGTTTCTGGCGGATTGGAGGCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304139.6
CDS CAA 72 bp TTCCCTTGCAACTTCTTGAGCACGGCCACCTCCATCTaGAGGACCTGCTTGGGCTGCTGGGCTGACTCCACC +
Preference number: 6 (lower is better)
Translates to: FPCNFLSTATSI*RTCLGCWADST
Trigger: GGTGGAGTCAGCCCAGCAGCCCAAGCAGGTCCTCAAGATGGAGGTGGCCGTGCTCAAGAAGTTGCAAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 72 bp CTCGCCCCCAGCGCTGAACTCCTCAGACCGCAAGGCTaGTCCACCGGAAGACATGACGTTGAGGTGGGTTTT +
Preference number: 6 (lower is better)
Translates to: LAPSAELLRPQG*STGRHDVEVGF
Trigger: AAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGAGGAGTTCAGCGCTGGGGGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp GGGAAGTCCTTGAGCTCCGTCTCCTTGTCGATGATGACCCACTCTTaGCTGTCGAAATCCTCCTCCTCAGCCAGCGGCACCGAGCGGAAG +
Preference number: 6 (lower is better)
Translates to: GKSLSSVSLSMMTHS*LSKSSSSASGTERK
Trigger: CTTCCGCTCGGTGCCGCTGGCTGAGGAGGAGGATTTCGACAGCAAAGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAAGGACTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS TCA 72 bp ACCGCGCCCGTTCTCGGTAATCGGAGAGGTCTCTTTTaGAGTCCTGGTAGGGCAGACTCAGAGGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: TAPVLGNRRGLF*SPGRADSEAQL
Trigger: GAGCTGTGCCTCTGAGTCTGCCCTACCAGGACTTCAAAAGAGACCTCTCCGATTACCGAGAACGGGCGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS TCA 72 bp AATGTGCACAAAGGTCCTCTCAACTTTGGTGAAGGGTaGGGAGGTGACTGCCACGCCCCCGACCCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: NVHKGPLNFGEG*GGDCHAPDPCG
Trigger: ACCACAGGGGTCGGGGGCGTGGCAGTCACCTCCTCACCCTTCACCAAAGTTGAGAGGACCTTTGTGCACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 72 bp ACAGAGTGGATGGCCTCGATGGACTCCAAGATCTGCTaGCCCAGCCGCAATGTGGTGCTCAGCGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: TEWMASMDSKIC*PSRNVVLSVKV
Trigger: CACCTTCACGCTGAGCACCACATTGCGGCTGGGCAAGCAGATCTTGGAGTCCATCGAGGCCATCCACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 72 bp TTGAGCTCCGTCTCCTTGTCGATGATGACCCACTCTTaGCTGTCGAAATCCTCCTCCTCAGCCAGCGGCACC +
Preference number: 6 (lower is better)
Translates to: LSSVSLSMMTHS*LSKSSSSASGT
Trigger: GGTGCCGCTGGCTGAGGAGGAGGATTTCGACAGCAAAGAGTGGGTCATCATCGACAAGGAGACGGAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp ATGTGGTCCAGGAAGAGGTGGAACTCTGACGGCATGTaGTTCAGCAGCATCCGGTGCTCATACTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MWSRKRWNSDGM*FSSIRCSYFSL
Trigger: CAAGGAGAAGTATGAGCACCGGATGCTGCTGAAGCACATGCCGTCAGAGTTCCACCTCTTCCTGGACCACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CCA 72 bp CGCAAGGCTTGTCCACCGGAAGACATGACGTTGAGGTaGGTTTTCTCCGCAATGTGCACAAAGGTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: RKACPPEDMTLR*VFSAMCTKVLS
Trigger: TGAGAGGACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 72 bp TCAGACCGCAAGGCTTGTCCACCGGAAGACATGACGTaGAGGTGGGTTTTCTCCGCAATGTGCACAAAGGTC +
Preference number: 6 (lower is better)
Translates to: SDRKACPPEDMT*RWVFSAMCTKV
Trigger: GACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS CAA 90 bp CTGAACTCCTCAGACCGCAAGGCTTGTCCACCGGAAGACATGACGTaGAGGTGGGTTTTCTCCGCAATGTGCACAAAGGTCCTCTCAACT +
Preference number: 6 (lower is better)
Translates to: LNSSDRKACPPEDMT*RWVFSAMCTKVLST
Trigger: AGTTGAGAGGACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTCCGGTGGACAAGCCTTGCGGTCTGAGGAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9
CDS GCA 72 bp TGGAACTCTGACGGCATGTGCTTCAGCAGCATCCGGTaGTCATACTTCTCCTTGATCATCCCTACCTGTTCC +
Preference number: 6 (lower is better)
Translates to: WNSDGMCFSSIR*SYFSLIIPTCS
Trigger: GGAACAGGTAGGGATGATCAAGGAGAAGTATGAGCACCGGATGCTGCTGAAGCACATGCCGTCAGAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS CAA 72 bp TCCACACAGGGGCTTTTGCCGATGTTGATCCGGAGTTaGTTCCGGTTGACATCTGTCTCCTCCCAGACTTCA +
Preference number: 6 (lower is better)
Translates to: STQGLLPMLIRS*FRLTSVSSQTS
Trigger: TGAAGTCTGGGAGGAGACAGATGTCAACCGGAACAAACTCCGGATCAACATCGGCAAAAGCCCCTGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259750.9
ENST00000304139.6
CDS GCA 72 bp GAAGACATGACGTTGAGGTGGGTTTTCTCCGCAATGTaGACAAAGGTCCTCTCAACTTTGGTGAAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: EDMTLRWVFSAM*TKVLSTLVKGE
Trigger: CTCACCCTTCACCAAAGTTGAGAGGACCTTTGTGCACATTGCGGAGAAAACCCACCTCAACGTCATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259750.9