RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSLP (Homo sapiens)

Ensembl gene IDs: ENSG00000145777

Ensembl transcript IDs: ENST00000344895.4, ENST00000379706.4, ENST00000420978.6

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTaGAGCGGGAATTCAAGAATCGATTTGACATCCCCTGTTCACTTT +
Preference number: 1 (lower is better)
Translates to: GSEWKLSERVPAALA*SGNSRIDLTSPVHF
Trigger: AAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR TCA 90 bp CCTCTTGAGCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATaGAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTTGAG +
Preference number: 1 (lower is better)
Translates to: PLEQCLCNYSRELLP*SQSSMLWKLPSTFE
Trigger: CTCAAATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR GCA 90 bp TTTAGAAAGCAGGCATGTCCTGATTTTCCTCAGGACAAAAGAAACTaGCTATTCAGCTATACCCTGAGCTTCTCTGGACAAAGGCTGAGT +
Preference number: 1 (lower is better)
Translates to: FRKQACPDFPQDKRN*LFSYTLSFSGQRLS
Trigger: ACTCAGCCTTTGTCCAGAGAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGCCTGCTTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR GCA 90 bp ATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACAT +
Preference number: 1 (lower is better)
Translates to: IFLLSNAYATTAENY*HEASHQCYGSFPQH
Trigger: ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR GCA 90 bp CTTTTCTATCCCCATTGTTTGGCTGAAGGCTTGTTCCACAGTAAGTaGTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTA +
Preference number: 1 (lower is better)
Translates to: LFYPHCLAEGLFHSK*SLNVDWTCNVSFLL
Trigger: TAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCACTTACTGTGGAACAAGCCTTCAGCCAAACAATGGGGATAGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGACATTCCCACGTGCAGTaGGTTGCCCTTCCCACTGGT +
Preference number: 2 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGHSHVQ*VALPTG
Trigger: ACCAGTGGGAAGGGCAACCCACTGCACGTGGGAATG...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAA +
Preference number: 2 (lower is better)
Translates to: SEWKLSERVPAALACSGNTAENY*HEASHQ
Trigger: TTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGT...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCCAGTGCATTCCCACGTaGAGTGGGTTGCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFQCIPT*SGLPFP
Trigger: TGGGAAGGGCAACCCACTGCACGTGGGAATGCACTG...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGACCTAGGAAAAATCAGTaGATTCCCACGTGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGPRKNQ*IPTCSG
Trigger: CCCACTGCACGTGGGAATGCACTGATTTTTCCTAGG...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR CAA 90 bp AGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATTCAAGAATCGATTaGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RVPAALACSGNSRID*TSPVHFFLLCFFQV
Trigger: CACCTGGAAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR TCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCGTTCTGAGTGGAAATTaGGTGAGAGGGTGCCTGCGG +
Preference number: 2 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFVLSGN*VRGCLR
Trigger: CCGCAGGCACCCTCTCACTCAATTTCCACTCAGAAC...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCCACGTGCAGTGGGTTaGCCTTCCCACTGGTGTTTA +
Preference number: 2 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGPRAVG*PSHWCL
Trigger: TAAACACCAGTGGGAAGGGCAACCCACTGCACGTGG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: AMLMQLQPRITAMKPVINASLNI*GVVLPL
Trigger: CAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGC...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR-3UTR TCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGACGAGAATTACTGCCATaGAGCCAGTCATCAATGTTA +
Preference number: 2 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGRELLP*SQSSML
Trigger: TAACATTGATGACTGGCTTCATGGCAGTAATTCTCG...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCCTGCGGCTCTAGCTTaGAGCGGGAATTCAAGAATC +
Preference number: 2 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGPAALA*SGNSRI
Trigger: GATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCAAGGGGAGCAGTCAGTaGGCTCTAAGGATGAGTGGA +
Preference number: 2 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGKGSSQ*ALRMSG
Trigger: TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTT...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR TCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: MQLQPRITAMKPVINVMEASLNI*GVVLPL
Trigger: CAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGC...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR-3UTR TCA 90 bp AGGATGATTGCAATGCATCCTGAAGCTGCCTATCTCCAAATATTCTCTCCTATAGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: RMIAMHPEAAYLQIFSPIASLNI*GVVLPL
Trigger: CAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGC...TATAGGAGAGAATATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCCTCCTGCTGCACTTTTaGATTTTCCTCTTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFLLLHF*IFLLSN
Trigger: ATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAG...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR TCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCCGAGAATTACTGCCATaGAGCCAGTCATCAATGTTA +
Preference number: 2 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIRELLP*SQSSML
Trigger: TAACATTGATGACTGGCTTCATGGCAGTAATTCTCG...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTAAGGGGAGCAGTCAGTaGGCTCTAAGGATGAGTGGA +
Preference number: 2 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLKGSSQ*ALRMSG
Trigger: TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR TCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGATTCAAGAATCGATTTaGCATCCCCTGTTCACTTTT +
Preference number: 2 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLIQESI*HPLFTF
Trigger: AAAAGTGAACAGGGGATGTCAAATCGATTCTTGAAT...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCTTGAGCAATGCTTATaGAACTACAGCCGAGAATTA +
Preference number: 2 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGLEQCL*NYSREL
Trigger: TAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTCAGTCATCAATGTTATaGAAGCTTCCCTCAACATTT +
Preference number: 2 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATQSSML*KLPSTF
Trigger: AAATGTTGAGGGAAGCTTCCATAACATTGATGACTG...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR-3UTR GCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAA +
Preference number: 2 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLTAENY*HEASHQ
Trigger: TTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR GCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTCTTGAGCAATGCTTATaGAACTACAGCCGAGAATTA +
Preference number: 2 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLLEQCL*NYSREL
Trigger: TAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAG...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR GCA 72 bp TGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTaGAGCGGGAATTCAAGAATCGATTTGACATCCCCT +
Preference number: 3 (lower is better)
Translates to: WKLSERVPAALA*SGNSRIDLTSP
Trigger: AGGGGATGTCAAATCGATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CAA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGAAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 3 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CAA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGACTTCTCAGGATCTACTaGTATATACCACTCTTGTCT +
Preference number: 3 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGLLRIY*YIPLLS
Trigger: AGACAAGAGTGGTATATACAAGTAGATCCTGAGAAG...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CAA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 3 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CAA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGTGTTTGGCTGAAGGCTaGTTCCACAGTAAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLCLAEG*FHSKCS
Trigger: AGAGCACTTACTGTGGAACAAGCCTTCAGCCAAACA...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR GCA 72 bp CAGGCATGTCCTGATTTTCCTCAGGACAAAAGAAACTaGCTATTCAGCTATACCCTGAGCTTCTCTGGACAA +
Preference number: 3 (lower is better)
Translates to: QACPDFPQDKRN*LFSYTLSFSGQ
Trigger: TTGTCCAGAGAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR-3UTR CAA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 3 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR TCA 72 bp CAATGCTTATGCAACTACAGCCGAGAATTACTGCCATaGAGCCAGTCATCAATGTTATGGAAGCTTCCCTCA +
Preference number: 3 (lower is better)
Translates to: QCLCNYSRELLP*SQSSMLWKLPS
Trigger: TGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR GCA 72 bp CCCCATTGTTTGGCTGAAGGCTTGTTCCACAGTAAGTaGTCTTTAAATGTGGACTGGACATGTAATGTAAGC +
Preference number: 3 (lower is better)
Translates to: PHCLAEGLFHSK*SLNVDWTCNVS
Trigger: GCTTACATTACATGTCCAGTCCACATTTAAAGAGCACTTACTGTGGAACAAGCCTTCAGCCAAACAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
3UTR GCA 72 bp TTGAGCAATGCTTATGCAACTACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAATGTTATGGAAGCTTC +
Preference number: 3 (lower is better)
Translates to: LSNAYATTAENY*HEASHQCYGSF
Trigger: GAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
3UTR TCA 72 bp CCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTGCATTATAAACTTACA +
Preference number: 3 (lower is better)
Translates to: PVINVMEASLNI*GVVLPLHYKLT
Trigger: TGTAAGTTTATAATGCAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCTTCCATAACATTGATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAGGAGCCAGACCGCGCTaGTGGGTGCCCAGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRGARPR*WVPSGD
Trigger: GTCGCCGCTGGGCACCCAGCAGCGCGGTCTGGCTCC...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGACAGTGCATTCCCACGTaGAGTGGGTTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGQCIPT*SGLPFP
Trigger: TGGGAAGGGCAACCCACTGCACGTGGGAATGCACTG...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATGCTCCTCCCTGGCTTaGCTCATGCGGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRCSSLA*LMRPWA
Trigger: GGCCCAGGGCCGCATGAGCCAAGCCAGGGAGGAGCA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATAAGGGGAGCAGTCAGTaGGCTCTAAGGATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SEWKLSERVPAALACSGNKGSSQ*ALRMSG
Trigger: TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTT...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATGGCTCATGCGGCCCTaGGCCCTCTCTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRWLMRP*ALSTPR
Trigger: CCTGGGTGTAGAGAGGGCCCAGGGCCGCATGAGCCA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGACCTAGGAAAAATCAGTaGATTCCCACGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGPRKNQ*IPTCSG
Trigger: CCCACTGCACGTGGGAATGCACTGATTTTTCCTAGG...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCCCCCTGCTCCTCCCTaGCTTGGCTCATGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHPPAPP*LGSCGP
Trigger: AGGGCCGCATGAGCCAAGCCAGGGAGGAGCAGGGGG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAAAACGTCTGTCACCTaGGGCCTCAGCCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRKTSVT*GLSPGT
Trigger: GGTGCCCGGGCTGAGGCCCCAGGTGACAGACGTTTT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGAGTTCTGAGTGGAAATTaGGTGAGAGGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGVLSGN*VRGCLR
Trigger: CCGCAGGCACCCTCTCACTCAATTTCCACTCAGAAC...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATTTCAGTAAGGCAATGTaGCTGCTCATAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: SEWKLSERVPAALACSGNFSKAM*LLIGGK
Trigger: TTTGCCGCCTATGAGCAGCCACATTGCCTTACTGAA...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379706.4
CDS-3UTR TCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGAGACGATGCTGTCCTaGGCTCAGCTCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEETMLS*AQLSRR
Trigger: CCTCCGGGAGAGCTGAGCTCAGGACAGCATCGTCTC...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTCGCGTGTCGGAGCCTaGATCGCTCTGGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHSRVGA*IALVLG
Trigger: CCCAAGGACCAGAGCGATGCAGGCTCCGACACGCGA...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAACCGCACGGAGACGATaGTGTCCTGAGCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRTARRR*CPELSS
Trigger: AGAGCTGAGCTCAGGACAGCATCGTCTCCGTGCGGT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGTGGCGAACATTTCTTTaGCGAGCGACGCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLWRTFL*RATRSR
Trigger: CCGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCA...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATCGGAGAAAGGAGGTTaGACGCCGTGTGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRSEKGG*TPCVSP
Trigger: GGGACTCACACACGGCGTCCAACCTCCTTTCTCCGA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATACACCAATGGAGGGTTaGAGGGAGGGAAAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINTPMEG*REGKAD
Trigger: GTCGGCCTTTCCCTCCCTTCAACCCTCCATTGGTGT...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGACAGGACAAAAGAAACTaGCTATTCAGCTATACCCTG +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGQDKRN*LFSYTL
Trigger: CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTG...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGACTCCTGCTGCACTTTTaGATTTTCCTCTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGLLLHF*IFLLSN
Trigger: ATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAG...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATAGCCGGCGGTGGGATTaGAGGTTAGGCTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINSRRWD*RLGSGF
Trigger: AAATCCAGAGCCTAACCTTCAATCCCACCGCCGGCT...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGATCAGTAAAGGTCGATTaGAGCGACGCCACAATCCTT +
Preference number: 4 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGSVKVD*SDATIL
Trigger: AAGGATTGTGGCGTCGCTTCAATCGACCTTTACTGA...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTATCAGGTTGCTGAGATaGACCCCCTGCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATIRLLR*TPCSSL
Trigger: CAGGGAGGAGCAGGGGGTTCATCTCAGCAACCTGAT...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACACCGATCAGGTTGCTaGGATGAACCCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEHRSGC*DEPPAP
Trigger: AGGAGCAGGGGGTTCATCTCAGCAACCTGATCGGTG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGAATTCACCCATGCTGTTaGCTTAAGTTGGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGIHPCC*LKLESP
Trigger: GGGAGACTCCAACTTAAGGCAACAGCATGGGTGAAT...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCTGCCTTAGGGGCCAGTaGTCAAGCACCAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFCLRGQ*SSTRFC
Trigger: GCAAAACCTGGTGCTTGAGCACTGGCCCCTAAGGCA...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGCCACGTGCAGTGGGTTaGCCTTCCCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLPRAVG*PSHWCL
Trigger: TAAACACCAGTGGGAAGGGCAACCCACTGCACGTGG...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATCCACGTGCAGTGGGTTaGCCTTCCCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINPRAVG*PSHWCL
Trigger: TAAACACCAGTGGGAAGGGCAACCCACTGCACGTGG...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTTCACAGGCCATGCGGTaGCTGGGGAAAAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATSQAMR*LGKRAR
Trigger: CCTTGCTCTTTTCCCCAGGCACCGCATGGCCTGTGA...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGATTGAAGGTTAGGCTCTaGATTTCAGTAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGLKVRL*ISVRQC
Trigger: ACATTGCCTTACTGAAATCCAGAGCCTAACCTTCAA...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCATTCCCACGTGCAGTaGGTTGCCCTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHHSHVQ*VALPTG
Trigger: ACCAGTGGGAAGGGCAACCCACTGCACGTGGGAATG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACCGCGCAGCGTAGACTaGAAAACGTCTGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEPRSVD*KTSVTW
Trigger: CCAGGTGACAGACGTTTTCCAGTCTACGCTGCGCGG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCAGCCGGCGGTGGGATTaGAGGTTAGGCTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGSRRWD*RLGSGF
Trigger: AAATCCAGAGCCTAACCTTCAATCCCACCGCCGGCT...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAGCCGGCGGTGGGATTaGAGGTTAGGCTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHSRRWD*RLGSGF
Trigger: AAATCCAGAGCCTAACCTTCAATCCCACCGCCGGCT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPASLNI*GVVLPL
Trigger: CAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGC...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAGCTTCCCTCAACATTTaGGGAGTAGTACTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRASLNI*GVVLPL
Trigger: CAGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGC...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGAGATTGCAATGCATCCTaGAGCTGCCTATCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGDCNAS*SCLSPN
Trigger: ATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATC...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATGTTGGACGCCGTGTGTaGGTCCCAGCAAATGTCACA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHVGRRV*VPANVT
Trigger: TGTGACATTTGCTGGGACTCACACACGGCGTCCAAC...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCGGTTTTGCCTCTCATTaGCAGTCCACAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFGFASH*QSTGSP
Trigger: AGGGCTTCCTGTGGACTGGCAATGAGAGGCAAAACC...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCGAGATCTGTAAGGCCTaGCTTAGGGGCCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGEICKA*LRGQCS
Trigger: TGAGCACTGGCCCCTAAGGCAGGCCTTACAGATCTC...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATAGTACTGAGATAGGCTaGTTTAATCTTCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SEWKLSERVPAALACSGNSTEIG*FNLLKV
Trigger: GACTTTGAGAAGATTAAAGCAGCCTATCTCAGTACT...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCCCTGCGGCTCTAGCTTaGAGCGGGAATTCAAGAATC +
Preference number: 4 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFPAALA*SGNSRI
Trigger: GATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGG...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATCCTGCGGCTCTAGCTTaGAGCGGGAATTCAAGAATC +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINPAALA*SGNSRI
Trigger: GATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGG...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATTGCTTGCTTATGGGATaGTTTGGAGGGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINCLLMG*FGGWGA
Trigger: TGCACCCCACCCTCCAAAGCATCCCATAAGCAAGCA...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATCAGTCATCAATGTTATaGAAGCTTCCCTCAACATTT +
Preference number: 4 (lower is better)
Translates to: SEWKLSERVPAALACSGNQSSML*KLPSTF
Trigger: AAATGTTGAGGGAAGCTTCCATAACATTGATGACTG...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATGCTTATGGGATGCTTTaGAGGGTGGGGTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHAYGML*RVGCSL
Trigger: GAGACTGCACCCCACCCTCCAAAGCATCCCATAAGC...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAACTGTGCTTGCTTATaGGATGCTTTGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRNCACL*DALEGG
Trigger: CCCACCCTCCAAAGCATCCCATAAGCAAGCACAGTT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAAGAGACGGTGTTGTTaGACTCGGTACTTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRKRRCC*TRYFWS
Trigger: GGACCAAAAGTACCGAGTTCAACAACACCGTCTCTT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR TCA 90 bp AGGATGATTGCAATGCATCCTGAAGCTGCCTATCTCCAAATATTCTCTCCTATAGTTCTGAGTGGAAATTaGGTGAGAGGGTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RMIAMHPEAAYLQIFSPIVLSGN*VRGCLR
Trigger: CCGCAGGCACCCTCTCACTCAATTTCCACTCAGAAC...TATAGGAGAGAATATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAGGGTCAGAAAACCTCTaGTTCACCGCTGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRGSENL*FTADFK
Trigger: TTTGAAGTCAGCGGTGAATCAGAGGTTTTCTGACCC...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGGCAATGTGGCCGATTaGTACAAGAGACGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINGNVAD*YKRRCC
Trigger: ACAACACCGTCTCTTGTAGCAATCGGCCACATTGCC...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR GCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAAAATGTCACAGGCCATaGGGTGCCTGGGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEKCHRP*GAWGKE
Trigger: CTCTTTTCCCCAGGCACCGCATGGCCTGTGACATTT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAAGGGGAGCAGTCAGTaGGCTCTAAGGATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHKGSSQ*ALRMSG
Trigger: TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GCAGGGCCAACAGGTATAAAGGGGAGCAGTCAGTGGGCTCTAAGGATGAGTGGATCTTTAAATGTGGACTaGACATGTAATGTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGPTGIKGSSQWALRMSGSLNVD*TCNVSF
Trigger: GAAGCTTACATTACATGTCCAGTCCACATTTAAAGA...TCCACTCATCCTTAGAGCCCACTGACTGCTCCCCTTTATACCTGTTGGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATTCAGTAAAGGTCGATTaGAGCGACGCCACAATCCTT +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINSVKVD*SDATIL
Trigger: AAGGATTGTGGCGTCGCTTCAATCGACCTTTACTGA...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCAGAAGAGGTCAGGGTTaGGTAGAGCAAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIRRGQG*VEQGRT
Trigger: GGTTCTTCCTTGCTCTACTCAACCCTGACCTCTTCT...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379706.4
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAAAAGCACAGCAAAGTaGGTCAGGGAGAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHKSTAK*VRESAL
Trigger: TAGGGCACTCTCCCTGACTCACTTTGCTGTGCTTTT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATACAGGGCATTTCCGTaGCCAATCCTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRYRAFP*PILSIW
Trigger: CCAAATAGAAAGGATTGGTCACGGAAATGCCCTGTA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCTCAAGCACCAGGTTTTaGCTCTCATTGCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKISSTRF*LSLPVH
Trigger: GTGGACTGGCAATGAGAGGCAAAACCTGGTGCTTGA...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCGGCAATGTGGCCGATTaGTACAAGAGACGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIGNVAD*YKRRCC
Trigger: ACAACACCGTCTCTTGTAGCAATCGGCCACATTGCC...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCCTAGGAAAAATCAGTaGATTCCCACGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHPRKNQ*IPTCSG
Trigger: CCCACTGCACGTGGGAATGCACTGATTTTTCCTAGG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACATCGCTCTGGTCCTTaGGAAGTTCCTAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEHRSGP*EVPRSH
Trigger: ATGACTCCTAGGAACTTCCCAAGGACCAGAGCGATG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTTTCCAGCAACACCAATaGAGGGTTGAAGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATFQQHQ*RVEGRE
Trigger: TTCCCTCCCTTCAACCCTCCATTGGTGTTGCTGGAA...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
3UTR CAA 72 bp GCGGCTCTAGCTTGCAGCGGGAATTCAAGAATCGATTaGACATCCCCTGTTCACTTTTTCCTACTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: AALACSGNSRID*TSPVHFFLLCF
Trigger: GAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTCCCGCTGCAAGCTAGAGCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAAAGAGACGGTGTTGTTaGACTCGGTACTTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEKRRCC*TRYFWS
Trigger: GGACCAAAAGTACCGAGTTCAACAACACCGTCTCTT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTCAGTAAAGGTCGATTaGAGCGACGCCACAATCCTT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHSVKVD*SDATIL
Trigger: AAGGATTGTGGCGTCGCTTCAATCGACCTTTACTGA...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGACGAGAATTACTGCCATaGAGCCAGTCATCAATGTTA +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRRELLP*SQSSML
Trigger: TAACATTGATGACTGGCTTCATGGCAGTAATTCTCG...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGGATTGCAATGCATCCTaGAGCTGCCTATCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLDCNAS*SCLSPN
Trigger: ATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATC...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAAGTGGGGAAAGATCTaGTGTGGCTTGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRKWGKI*CGLFSK
Trigger: TTTTGAGAACAAGCCACATCAGATCTTTCCCCACTT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAGGAACGATAAGAGGTTaGAATAAGTGGGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRGTIRG*NKWGKI
Trigger: GATCTTTCCCCACTTATTTCAACCTCTTATCGTTCC...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATGCCCTTATTCACCCATaGTGTTGCCTTAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHALIHP*CCLKLE
Trigger: CTCCAACTTAAGGCAACAGCATGGGTGAATAAGGGC...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR GCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLTAENY*HEASHQ
Trigger: TTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGT...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTCAGTGCATTCCCACGTaGAGTGGGTTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLQCIPT*SGLPFP
Trigger: TGGGAAGGGCAACCCACTGCACGTGGGAATGCACTG...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAAAAGGGAACATACGTaGACACCCAATTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHKREHT*TPNSTP
Trigger: TGGGGTGGAATTGGGTGTCCACGTATGTTCCCTTTT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGGAGAAGCATCGAGATaGCGGGCTCAGATTTTTACT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEGEASR*RAQIFT
Trigger: AGTAAAAATCTGAGCCCGCCATCTCGATGCTTCTCC...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTGCCACTGTAAGGATTTaGAGTCCTTGCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATATVRI*SPCICP
Trigger: GGGACATATGCAAGGACTCCAAATCCTTACAGTGGC...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGCGAGAATTACTGCCATaGAGCCAGTCATCAATGTTA +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLRELLP*SQSSML
Trigger: TAACATTGATGACTGGCTTCATGGCAGTAATTCTCG...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATCGAGAATTACTGCCATaGAGCCAGTCATCAATGTTA +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINRELLP*SQSSML
Trigger: TAACATTGATGACTGGCTTCATGGCAGTAATTCTCG...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGTCTCTGGACAAAGGCTaGGTCTTACCTACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLSLDKG*VLPTFL
Trigger: TAGAAAAGTAGGTAAGACTCAGCCTTTGTCCAGAGA...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCAAAGCAGGCATGTCCTaGTTTTCCTCAGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIKAGMS*FSSGQK
Trigger: CTTTTGTCCTGAGGAAAATCAGGACATGCCTGCTTT...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCCTCTGATTCACCGCTaGCTTCAAAAATGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHPLIHR*LQKWLF
Trigger: AAAGAGCCATTTTTGAAGTCAGCGGTGAATCAGAGG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAACTGGAGCCAGAGTTaGACTCTTCTTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHNWSQS*TLLHRR
Trigger: CCTTCTATGAAGAAGAGTTCAACTCTGGCTCCAGTT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATATGTCCCATGCATTCTaGACATCTTTGAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINMSHAF*TSLSIS
Trigger: GGAAATGCTCAAAGATGTTCAGAATGCATGGGACAT...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTTCTCCTCTTCTTCATTaGCTGAGTAGCATTTATCTG +
Preference number: 4 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPSPLLH*LSSIYL
Trigger: CAGATAAATGCTACTCAGGCAATGAAGAAGAGGAGA...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATACAGCCGAGAATTACTaGCATGAAGCCAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHTAENY*HEASHQ
Trigger: TTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCTCTATCCCCATTGTTTaGCTGAAGGCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGSIPIV*LKACST
Trigger: TGTGGAACAAGCCTTCAGCCAAACAATGGGGATAGA...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAATTCAAGAATCGATTTaGCATCCCCTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRIQESI*HPLFTF
Trigger: AAAAGTGAACAGGGGATGTCAAATCGATTCTTGAAT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCTCTCTGGACAAAGGCTaGGTCTTACCTACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKISLDKG*VLPTFL
Trigger: TAGAAAAGTAGGTAAGACTCAGCCTTTGTCCAGAGA...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCTAGCAAACTCTTGTTaGTCCAGAAAAGAGCGCTTA +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHLANSC*SRKERL
Trigger: TAAGCGCTCTTTTCTGGATCAACAAGAGTTTGCTAG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAGTACTGAGATAGGCTaGTTTAATCTTCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRSTEIG*FNLLKV
Trigger: GACTTTGAGAAGATTAAAGCAGCCTATCTCAGTACT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR GCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGCTTGAGCAATGCTTATaGAACTACAGCCGAGAATTA +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLLEQCL*NYSREL
Trigger: TAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAG...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATCTTGAGCAATGCTTATaGAACTACAGCCGAGAATTA +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINLEQCL*NYSREL
Trigger: TAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAG...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATAAAGAGTTCTCCTGCTaGACTTTTGGATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINKEFSC*TFGFSS
Trigger: AGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCTTT...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCTTGTTCCACAGTAAGTaGTCTTTAAATGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFLFHSK*SLNVDW
Trigger: CCAGTCCACATTTAAAGAGCACTTACTGTGGAACAA...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCCAGGACAAAAGAAACTaGCTATTCAGCTATACCCTG +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIQDKRN*LFSYTL
Trigger: CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTG...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGCTAGTAAGAAACTGTaGTTGCTTATGGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: AMLMQLQPRITAMKPVINASKKL*LLMGCF
Trigger: AAAGCATCCCATAAGCAAGCACAGTTTCTTACTAGC...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR GCA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAAACTTCCTCCTTTTTaGTTTGCCCTAAACACTTCA +
Preference number: 4 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRKLPPF*FALNTS
Trigger: TGAAGTGTTTAGGGCAAAGCAAAAAGGAGGAAGTTT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCTCCTGCTGCACTTTTaGATTTTCCTCTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHLLLHF*IFLLSN
Trigger: ATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACTCCTGCTGCACTTTTaGATTTTCCTCTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMELLLHF*IFLLSN
Trigger: ATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTGGGAAAGATCTGATGTaGCTTGTTCTCAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATGKDLM*LVLKNP
Trigger: AGGGTTTTTGAGAACAAGCCACATCAGATCTTTCCC...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAATTTGAGCATTTCCTGTaGCCACTTTCAACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEFEHFL*PLSTSA
Trigger: AGCACTAGTTGAAAGTGGCCACAGGAAATGCTCAAA...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR TCA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGGTAAAATCTAGTCAGTaGATCCCTACTAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLVKSSQ*IPTKME
Trigger: CTCCATTTTAGTAGGGATTCACTGACTAGATTTTAC...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTTCTCCTCTTCTTCATTaGCTGAGTAGCATTTATCTG +
Preference number: 4 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATSPLLH*LSSIYL
Trigger: CAGATAAATGCTACTCAGGCAATGAAGAAGAGGAGA...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR GCA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCCTTGAGCAATGCTTATaGAACTACAGCCGAGAATTA +
Preference number: 4 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKILEQCL*NYSREL
Trigger: TAATTCTCGGCTGTAGTTGCATAAGCATTGCTCAAG...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAAAAGAGTTCTCCTGCTaGACTTTTGGATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEKEFSC*TFGFSS
Trigger: AGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCTTT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTTGAAGGTTAGGCTCTaGATTTCAGTAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHLKVRL*ISVRQC
Trigger: ACATTGCCTTACTGAAATCCAGAGCCTAACCTTCAA...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAATTGAAGGTTAGGCTCTaGATTTCAGTAAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMELKVRL*ISVRQC
Trigger: ACATTGCCTTACTGAAATCCAGAGCCTAACCTTCAA...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAATTCAAGAATCGATTTaGCATCCCCTGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEIQESI*HPLFTF
Trigger: AAAAGTGAACAGGGGATGTCAAATCGATTCTTGAAT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp AGGATGATTGCAATGCATCCTGAAGCTGCCTATCTCCAAATATTCTCTCCTATATTGTTCCACAGTAAGTaGTCTTTAAATGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RMIAMHPEAAYLQIFSPILFHSK*SLNVDW
Trigger: CCAGTCCACATTTAAAGAGCACTTACTGTGGAACAA...TATAGGAGAGAATATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATCATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTCCTCCTTTTTGCTTTaGCCTAAACACTTCATAAGT +
Preference number: 4 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHSSFLL*PKHFIS
Trigger: ACTTATGAAGTGTTTAGGGCAAAGCAAAAAGGAGGA...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CCA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCAGTCATCAATGTTATaGAAGCTTCCCTCAACATTT +
Preference number: 4 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGQSSML*KLPSTF
Trigger: AAATGTTGAGGGAAGCTTCCATAACATTGATGACTG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CCA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACAGTCATCAATGTTATaGAAGCTTCCCTCAACATTT +
Preference number: 4 (lower is better)
Translates to: MQLQPRITAMKPVINVMEQSSML*KLPSTF
Trigger: AAATGTTGAGGGAAGCTTCCATAACATTGATGACTG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR TCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTAAAGCAGGCATGTCCTaGTTTTCCTCAGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLKAGMS*FSSGQK
Trigger: CTTTTGTCCTGAGGAAAATCAGGACATGCCTGCTTT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR TCA 90 bp AGGATGATTGCAATGCATCCTGAAGCTGCCTATCTCCAAATATTCTCTCCTATAGTAAAATCTAGTCAGTaGATCCCTACTAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: RMIAMHPEAAYLQIFSPIVKSSQ*IPTKME
Trigger: CTCCATTTTAGTAGGGATTCACTGACTAGATTTTAC...TATAGGAGAGAATATTTGGAGATAGGCAGCTTCAGGATGCATTGCAATCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR GCA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTTCTCCTCTTCTTCATTaGCTGAGTAGCATTTATCTG +
Preference number: 4 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLSPLLH*LSSIYL
Trigger: CAGATAAATGCTACTCAGGCAATGAAGAAGAGGAGA...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS GCA 90 bp CCAGACCGCGCTGCTGGGTGCCCAGCGGCGACCGCACGGAGACGATaGTGTCCTGAGCTCAGCTCTCCCGGAGGCGGCGCACGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: PDRAAGCPAATARRR*CPELSSPGGGARFS
Trigger: ACTAAAGCGTGCGCCGCCTCCGGGAGAGCTGAGCTCAGGACAGCATCGTCTCCGTGCGGTCGCCGCTGGGCACCCAGCAGCGCGGTCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS GCA 90 bp TTAAGGCCAGCGACACAAGAAGCGGAGCCAGACCGCGCTGCTGGGTaGCCAGCGGCGACCGCACGGAGACGATGCTGTCCTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LRPATQEAEPDRAAG*PAATARRRCCPELS
Trigger: GCTGAGCTCAGGACAGCATCGTCTCCGTGCGGTCGCCGCTGGGCACCCAGCAGCGCGGTCTGGCTCCGCTTCTTGTGTCGCTGGCCTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 90 bp AGGGTTGAAGGGAGGGAAAGGCCGACACCGATCAGGTTGCTGAGATaGACCCCCTGCTCCTCCCTGGCTTGGCTCATGCGGCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RVEGRERPTPIRLLR*TPCSSLAWLMRPWA
Trigger: GGCCCAGGGCCGCATGAGCCAAGCCAGGGAGGAGCAGGGGGTTCATCTCAGCAACCTGATCGGTGTCGGCCTTTCCCTCCCTTCAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 90 bp TTCCTAGGAGTCATCGCTCGGAGAAAGGAGGTTGGACGCCGTGTGTaGGTCCCAGCAAATGTCACAGGCCATGCGGTGCCTGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: FLGVIARRKEVGRRV*VPANVTGHAVPGEK
Trigger: CTTTTCCCCAGGCACCGCATGGCCTGTGACATTTGCTGGGACTCACACACGGCGTCCAACCTCCTTTCTCCGAGCGATGACTCCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CCA 90 bp TTGGCGAGCGACGCGCAGCCGGCGGTGGGATTGAAGGTTAGGCTCTaGATTTCAGTAAGGCAATGTGGCCGATTGCTACAAGAGACGGTG +
Preference number: 5 (lower is better)
Translates to: LASDAQPAVGLKVRL*ISVRQCGRLLQETV
Trigger: CACCGTCTCTTGTAGCAATCGGCCACATTGCCTTACTGAAATCCAGAGCCTAACCTTCAATCCCACCGCCGGCTGCGCGTCGCTCGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATGGTTCTGAGTGGAAATaGAGTGAGAGGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: SEWKLSERVPAALACSGNGSEWK*SERVPA
Trigger: CGCAGGCACCCTCTCACTCAATTTCCACTCAGAACC...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS TCA 90 bp GTCTGTCTAGCAGTCTTCCCAGTTCCAGCAACACCAATGGAGGGTTaGAGGGAGGGAAAGGCCGACACCGATCAGGTTGCTGAGATGAAC +
Preference number: 5 (lower is better)
Translates to: VCLAVFPVPATPMEG*REGKADTDQVAEMN
Trigger: GTTCATCTCAGCAACCTGATCGGTGTCGGCCTTTCCCTCCCTTCAACCCTCCATTGGTGTTGCTGGAACTGGGAAGACTGCTAGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS GCA 90 bp ATCTGTAAGGCCTGCCTTAGGGGCCAGTGCTCAAGCACCAGGTTTTaGCTCTCATTGCCAGTCCACAGGAAGCCCTTATTCACCCATGCT +
Preference number: 5 (lower is better)
Translates to: ICKACLRGQCSSTRF*LSLPVHRKPLFTHA
Trigger: AGCATGGGTGAATAAGGGCTTCCTGTGGACTGGCAATGAGAGGCAAAACCTGGTGCTTGAGCACTGGCCCCTAAGGCAGGCCTTACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR CAA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGACCCACGTGCAGTGGGTaGCCCTTCCCACTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGPTCSG*PFPLVF
Trigger: AAACACCAGTGGGAAGGGCAACCCACTGCACGTGGG...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCTGCTCCTCCCTGGCTaGGCTCATGCGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHLLLPG*AHAALG
Trigger: GCCCAGGGCCGCATGAGCCAAGCCAGGGAGGAGCAG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTATGGCGAACATTTCTTaGGCGAGCGACGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPMANIS*ASDAQP
Trigger: CGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCAT...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp TCTGAGTGGAAATTGAGTGAGAGGGTGCCTGCGGCTCTAGCTTGCAGCGGGAATTGTTTGGCTGAAGGCTaGTTCCACAGTAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SEWKLSERVPAALACSGNCLAEG*FHSKCS
Trigger: AGAGCACTTACTGTGGAACAAGCCTTCAGCCAAACA...ATTCCCGCTGCAAGCTAGAGCCGCAGGCACCCTCTCACTCAATTTCCACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS CCA 90 bp AGTGCTTTCCCTTCTCCTTGGCTAGTAAGAAACTGTGCTTGCTTATaGGATGCTTTGGAGGGTGGGGTGCAGTCTCAGTCTTCGACAGCA +
Preference number: 5 (lower is better)
Translates to: SAFPSPWLVRNCACL*DALEGGVQSQSSTA
Trigger: TGCTGTCGAAGACTGAGACTGCACCCCACCCTCCAAAGCATCCCATAAGCAAGCACAGTTTCTTACTAGCCAAGGAGAAGGGAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATCTCGGAGAAAGGAGGTaGGACGCCGTGTGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: AMLMQLQPRITAMKPVINLGERR*DAVCES
Trigger: GGACTCACACACGGCGTCCAACCTCCTTTCTCCGAG...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CCA 90 bp GCCTCAGCCCGGGCACCAGTTTTAGAGACAGGAGAAGCATCGAGATaGCGGGCTCAGATTTTTACTAGCAAACTCTTGTTGATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ASARAPVLETGEASR*RAQIFTSKLLLIQK
Trigger: TTTCTGGATCAACAAGAGTTTGCTAGTAAAAATCTGAGCCCGCCATCTCGATGCTTCTCCTGTCTCTAAAACTGGTGCCCGGGCTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAATGGCGAACATTTCTTaGGCGAGCGACGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: MQLQPRITAMKPVINVMEMANIS*ASDAQP
Trigger: CGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCAT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATGCTTATGGGATGCTTaGGAGGGTGGGGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRCLWDA*EGGVQS
Trigger: AGACTGCACCCCACCCTCCAAAGCATCCCATAAGCA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTCTCAAGCACCAGGTTTaGCCTCTCATTGCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPLKHQV*PLIASP
Trigger: TGGACTGGCAATGAGAGGCAAAACCTGGTGCTTGAG...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAAGGCAATGTGGCCGATaGCTACAAGAGACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRRQCGR*LQETVL
Trigger: CAACACCGTCTCTTGTAGCAATCGGCCACATTGCCT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCCAGCCGGCGGTGGGATaGAAGGTTAGGCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKIQPAVG*KVRLWI
Trigger: AATCCAGAGCCTAACCTTCAATCCCACCGCCGGCTG...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCAGCCGGCGGTGGGATaGAAGGTTAGGCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGQPAVG*KVRLWI
Trigger: AATCCAGAGCCTAACCTTCAATCCCACCGCCGGCTG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCAGCCGGCGGTGGGATaGAAGGTTAGGCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHQPAVG*KVRLWI
Trigger: AATCCAGAGCCTAACCTTCAATCCCACCGCCGGCTG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGGGTTCTGAGTGGAAATaGAGTGAGAGGGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLGSEWK*SERVPA
Trigger: CGCAGGCACCCTCTCACTCAATTTCCACTCAGAACC...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS CCA 90 bp GAGCATTTCCTGTGGCCACTTTCAACTAGTGCTTTCCCTTCTCCTTaGCTAGTAAGAAACTGTGCTTGCTTATGGGATGCTTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: EHFLWPLSTSAFPSP*LVRNCACLWDALEG
Trigger: ACCCTCCAAAGCATCCCATAAGCAAGCACAGTTTCTTACTAGCCAAGGAGAAGGGAAAGCACTAGTTGAAAGTGGCCACAGGAAATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCGCCTGCGGCTCTAGCTaGCAGCGGGAATTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGACGSS*QREFKN
Trigger: ATTCTTGAATTCCCGCTGCAAGCTAGAGCCGCAGGC...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGATGGGATGACTTTGAGTaGTCTCCTTTCTCCCTAATC +
Preference number: 5 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGWDDFE*SPFSLI
Trigger: GATTAGGGAGAAAGGAGACAACTCAAAGTCATCCCA...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGACTTAATGGGATGACTTaGAGTTGTCTCCTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGLNGMT*SCLLSP
Trigger: GGGAGAAAGGAGACAACTCAAAGTCATCCCATTAAG...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGAAAAACGCCTACTCTaGGTGGCTAGGGGCACCTTA +
Preference number: 5 (lower is better)
Translates to: AMLMQLQPRITAMKPVINEKRLL*VARGTL
Trigger: TAAGGTGCCCCTAGCCACCAAGAGTAGGCGTTTTTC...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 90 bp AAACTCTTGTTGATCCAGAAAAGAGCGCTTAAAAGCACAGCAAAGTaGGTCAGGGAGAGTGCCCTAGAGGATGTCTGTCTAGCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KLLLIQKRALKSTAK*VRESALEDVCLAVF
Trigger: GAAGACTGCTAGACAGACATCCTCTAGGGCACTCTCCCTGACTCACTTTGCTGTGCTTTTAAGCGCTCTTTTCTGGATCAACAAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATTCAGTAAAGGTCGATaGAAGCGACGCCACAATCCT +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRFSKGR*KRRHNP
Trigger: AGGATTGTGGCGTCGCTTCAATCGACCTTTACTGAA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp CCCCACTTCTGTCATGGTTTAGCCCCAACTAACCCTCAGGGAGTAATTAGAGGATCACTTTTTCCTACTTaGTTTCTTCCAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PHFCHGLAPTNPQGVIRGSLFPT*FLPGVR
Trigger: CCTCACACCTGGAAGAAACAAAGTAGGAAAAAGTGA...TCCTCTAATTACTCCCTGAGGGTTAGTTGGGGCTAAACCATGACAGAAGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTTGTTTGGCTGAAGGCTaGTTCCACAGTAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPCLAEG*FHSKCS
Trigger: AGAGCACTTACTGTGGAACAAGCCTTCAGCCAAACA...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTATGGCGAACATTTCTTaGGCGAGCGACGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLMANIS*ASDAQP
Trigger: CGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCAT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTCCCACGTGCAGTGGGTaGCCCTTCCCACTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLPTCSG*PFPLVF
Trigger: AAACACCAGTGGGAAGGGCAACCCACTGCACGTGGG...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGATGGGATGACTTTGAGTaGTCTCCTTTCTCCCTAATC +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRWDDFE*SPFSLI
Trigger: GATTAGGGAGAAAGGAGACAACTCAAAGTCATCCCA...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS TCA 90 bp AGCCACTGTAAGGATTTGGAGTCCTTGCATATGTCCCATGCATTCTaGACATCTTTGAGCATTTCCTGTGGCCACTTTCAACTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: SHCKDLESLHMSHAF*TSLSISCGHFQLVL
Trigger: AAGCACTAGTTGAAAGTGGCCACAGGAAATGCTCAAAGATGTTCAGAATGCATGGGACATATGCAAGGACTCCAAATCCTTACAGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAACAAGAGACGGTGTTGTaGAACTCGGTACTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: MQLQPRITAMKPVINVMEQETVL*NSVLLV
Trigger: GACCAAAAGTACCGAGTTCAACAACACCGTCTCTTG...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCAAGAGACGGTGTTGTaGAACTCGGTACTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHQETVL*NSVLLV
Trigger: GACCAAAAGTACCGAGTTCAACAACACCGTCTCTTG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATTTCAGTAAAGGTCGATaGAAGCGACGCCACAATCCT +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHFSKGR*KRRHNP
Trigger: AGGATTGTGGCGTCGCTTCAATCGACCTTTACTGAA...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp CAGTGGGCTCTAAGGATGAGTGGAGGTAAAAACCTGAAGGAAGATAATGTCCCTATGGATTTAAGGACATaGAACTTCCCCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: QWALRMSGGKNLKEDNVPMDLRT*NFPTSV
Trigger: GACAGAAGTGGGGAAGTTCAATGTCCTTAAATCCAT...AGGGACATTATCTTCCTTCAGGTTTTTACCTCCACTCATCCTTAGAGCCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATGGAATTCTTCATGTGTaGTACTCGAGTCACCACAGC +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHGILHV*YSSHHS
Trigger: GCTGTGGTGACTCGAGTACAACACATGAAGAATTCC...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGAACTAGCAAACTCTTGTaGATCCAGAAAAGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRTSKLL*IQKRAL
Trigger: AAGCGCTCTTTTCTGGATCAACAAGAGTTTGCTAGT...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp GCAATGCTTATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATAAGGATTTGGAGTCCTaGCATATGTCCCATGCATTC +
Preference number: 5 (lower is better)
Translates to: AMLMQLQPRITAMKPVINKDLES*HMSHAF
Trigger: GAATGCATGGGACATATGCAAGGACTCCAAATCCTT...ATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCATAAGCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTCTACAAGAGACGGTGTaGTTGAACTCGGTACTTTTG +
Preference number: 5 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATLQETV*LNSVLL
Trigger: CAAAAGTACCGAGTTCAACAACACCGTCTCTTGTAG...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGCTTCCCTCAACATCTACAAGAGACGGTGTaGTTGAACTCGGTACTTTTG +
Preference number: 5 (lower is better)
Translates to: ENYCHEASHQCYGSFPQHLQETV*LNSVLL
Trigger: CAAAAGTACCGAGTTCAACAACACCGTCTCTTGTAG...ATGTTGAGGGAAGCTTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS-3UTR CAA 90 bp CCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTACAGCCGACTTCTCAGGATCTACTaGTATATACCACTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PAALLDFPLEQCLCNYSRLLRIY*YIPLLS
Trigger: AGACAAGAGTGGTATATACAAGTAGATCCTGAGAAG...TCGGCTGTAGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS-3UTR CAA 90 bp GCATGTCCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGTCACTTTTTCCTACTTaGTTTCTTCCAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: ACPDFPQDKRNCLFSYTLSLFPT*FLPGVR
Trigger: CCTCACACCTGGAAGAAACAAAGTAGGAAAAAGTGA...CAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGGACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp CCTGATTTTCCTCAGGACAAAAGAAACTGCCTATTCAGCTATACCCTGAGCTTCGCTTCCTCTTACCTGTaGGCAAGTAAGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: PDFPQDKRNCLFSYTLSFASSYL*ASKMDL
Trigger: TAAATCCATCTTACTTGCCAACAGGTAAGAGGAAGC...GAAGCTCAGGGTATAGCTGAATAGGCAGTTTCTTTTGTCCTGAGGAAAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCCTTAATGGGATGACTTaGAGTTGTCTCCTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGLNGMT*SCLLSP
Trigger: GGGAGAAAGGAGACAACTCAAAGTCATCCCATTAAG...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTAGGCAATGTGGCCGATaGCTACAAGAGACGGTGTTG +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLRQCGR*LQETVL
Trigger: CAACACCGTCTCTTGTAGCAATCGGCCACATTGCCT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS-3UTR CAA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAATGGATTTAAGGACATaGAACTTCCCCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: MQLQPRITAMKPVINVMEMDLRT*NFPTSV
Trigger: GACAGAAGTGGGGAAGTTCAATGTCCTTAAATCCAT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTGCTTCCTCTTACCTGTaGGCAAGTAAGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATASSYL*ASKMDL
Trigger: TAAATCCATCTTACTTGCCAACAGGTAAGAGGAAGC...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAAGTAAGAAACTGTGCTaGCTTATGGGATGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: MQLQPRITAMKPVINVMESKKLC*LMGCFG
Trigger: TCCAAAGCATCCCATAAGCAAGCACAGTTTCTTACT...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp ATGCAACTACAGCCGAGAATTACTGCCATGAAGCCAGTCATCAATGTTATGGAAGAAACTTCCTCCTTTTaGCTTTGCCCTAAACACTTC +
Preference number: 5 (lower is better)
Translates to: MQLQPRITAMKPVINVMEETSSF*LCPKHF
Trigger: GAAGTGTTTAGGGCAAAGCAAAAAGGAGGAAGTTTC...TTCCATAACATTGATGACTGGCTTCATGGCAGTAATTCTCGGCTGTAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp CCAACTAACCCTCAGGGAGTAATTAGAGGAACATGTCTACTCCTAGGAAAAATCCTTCTCAGGATCTACTaGTATATACCACTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PTNPQGVIRGTCLLLGKILLRIY*YIPLLS
Trigger: AGACAAGAGTGGTATATACAAGTAGATCCTGAGAAG...GATTTTTCCTAGGAGTAGACATGTTCCTCTAATTACTCCCTGAGGGTTAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTGAGAAGAGGTCAGGGTaGAGTAGAGCAAGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLEKRSG*SRARKN
Trigger: GTTCTTCCTTGCTCTACTCAACCCTGACCTCTTCTC...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379706.4
CDS-3UTR CAA 90 bp AGAGTTCTCCTGCTGCACTTTTGGATTTTCCTCTTGAGCAATGCTTATGCAACTTTTACTAGCAAACTCTaGTTGATCCAGAAAAGAGCG +
Preference number: 5 (lower is better)
Translates to: RVLLLHFWIFLLSNAYATFTSKL*LIQKRA
Trigger: CGCTCTTTTCTGGATCAACAAGAGTTTGCTAGTAAA...AGTTGCATAAGCATTGCTCAAGAGGAAAATCCAAAAGTGCAGCAGGAGAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTTTCAGTAAAGGTCGATaGAAGCGACGCCACAATCCT +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLFSKGR*KRRHNP
Trigger: AGGATTGTGGCGTCGCTTCAATCGACCTTTACTGAA...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTAGCTTCCCTCAACATTaGAGGAGTAGTACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLSFPQH*RSSTSP
Trigger: AGGGGAAGTACTACTCCTCAAATGTTGAGGGAAGCT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp TGCTCTTTAAATGTGGACTGGACATGTAATGTAAGCTTCCTCTTACCTGTTGGCAATTCAAGAATCGATTaGACATCCCCTGTTCACTTT +
Preference number: 5 (lower is better)
Translates to: CSLNVDWTCNVSFLLPVGNSRID*TSPVHF
Trigger: AAAGTGAACAGGGGATGTCAAATCGATTCTTGAATT...GCCAACAGGTAAGAGGAAGCTTACATTACATGTCCAGTCCACATTTAAAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS-3UTR CAA 90 bp GAATTCAAGAATCGATTTGACATCCCCTGTTCACTTTTTCCTACTTTGTTTCTTAATTCAAGAATCGATTaGACATCCCCTGTTCACTTT +
Preference number: 5 (lower is better)
Translates to: EFKNRFDIPCSLFPTLFLNSRID*TSPVHF
Trigger: AAAGTGAACAGGGGATGTCAAATCGATTCTTGAATT...AAGAAACAAAGTAGGAAAAAGTGAACAGGGGATGTCAAATCGATTCTTGAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000379706.4
CDS CCA 72 bp GCCAGCGACACAAGAAGCGGAGCCAGACCGCGCTGCTaGGTGCCCAGCGGCGACCGCACGGAGACGATGCTG +
Preference number: 6 (lower is better)
Translates to: ASDTRSGARPRC*VPSGDRTETML
Trigger: CAGCATCGTCTCCGTGCGGTCGCCGCTGGGCACCCAGCAGCGCGGTCTGGCTCCGCTTCTTGTGTCGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS GCA 72 bp GCGACACAAGAAGCGGAGCCAGACCGCGCTGCTGGGTaGCCAGCGGCGACCGCACGGAGACGATGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: ATQEAEPDRAAG*PAATARRRCCP
Trigger: AGGACAGCATCGTCTCCGTGCGGTCGCCGCTGGGCACCCAGCAGCGCGGTCTGGCTCCGCTTCTTGTGTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 72 bp GGGAGGGAAAGGCCGACACCGATCAGGTTGCTGAGATaGACCCCCTGCTCCTCCCTGGCTTGGCTCATGCGG +
Preference number: 6 (lower is better)
Translates to: GRERPTPIRLLR*TPCSSLAWLMR
Trigger: CCGCATGAGCCAAGCCAGGGAGGAGCAGGGGGTTCATCTCAGCAACCTGATCGGTGTCGGCCTTTCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CCA 72 bp GCCCTCGCGTGTCGGAGCCTGCATCGCTCTGGTCCTTaGGAAGTTCCTAGGAGTCATCGCTCGGAGAAAGGA +
Preference number: 6 (lower is better)
Translates to: ALACRSLHRSGP*EVPRSHRSEKG
Trigger: TCCTTTCTCCGAGCGATGACTCCTAGGAACTTCCCAAGGACCAGAGCGATGCAGGCTCCGACACGCGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 72 bp GTCATCGCTCGGAGAAAGGAGGTTGGACGCCGTGTGTaGGTCCCAGCAAATGTCACAGGCCATGCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: VIARRKEVGRRV*VPANVTGHAVP
Trigger: AGGCACCGCATGGCCTGTGACATTTGCTGGGACTCACACACGGCGTCCAACCTCCTTTCTCCGAGCGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 72 bp GCAGTCTTCCCAGTTCCAGCAACACCAATGGAGGGTTaGAGGGAGGGAAAGGCCGACACCGATCAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: AVFPVPATPMEG*REGKADTDQVA
Trigger: AGCAACCTGATCGGTGTCGGCCTTTCCCTCCCTTCAACCCTCCATTGGTGTTGCTGGAACTGGGAAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS GCA 72 bp GGGGCCAGTGCTCAAGCACCAGGTTTTGCCTCTCATTaGCAGTCCACAGGAAGCCCTTATTCACCCATGCTG +
Preference number: 6 (lower is better)
Translates to: GASAQAPGFASH*QSTGSPYSPML
Trigger: CAGCATGGGTGAATAAGGGCTTCCTGTGGACTGGCAATGAGAGGCAAAACCTGGTGCTTGAGCACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344895.4
CDS CAA 72 bp GCTAAGGCAGCCTTAGTTTTCATGGCGAACATTTCTTaGGCGAGCGACGCGCAGCCGGCGGTGGGATTGAAG +
Preference number: 6 (lower is better)
Translates to: AKAALVFMANIS*ASDAQPAVGLK
Trigger: CTTCAATCCCACCGCCGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCATGAAAACTAAGGCTGCCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS CAA 72 bp AGCAGTCTTCCCAGTTCCAGCAACACCAATGGAGGGTaGAAGGGAGGGAAAGGCCGACACCGATCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: SSLPSSSNTNGG*KGGKGRHRSGC
Trigger: GCAACCTGATCGGTGTCGGCCTTTCCCTCCCTTCAACCCTCCATTGGTGTTGCTGGAACTGGGAAGACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CAA 90 bp CACCAGATAGCTAAGGCAGCCTTAGTTTTCATGGCGAACATTTCTTaGGCGAGCGACGCGCAGCCGGCGGTGGGATTGAAGGTTAGGCTC +
Preference number: 6 (lower is better)
Translates to: HQIAKAALVFMANIS*ASDAQPAVGLKVRL
Trigger: GAGCCTAACCTTCAATCCCACCGCCGGCTGCGCGTCGCTCGCCAAAGAAATGTTCGCCATGAAAACTAAGGCTGCCTTAGCTATCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6
CDS CCA 72 bp CGGGCACCAGTTTTAGAGACAGGAGAAGCATCGAGATaGCGGGCTCAGATTTTTACTAGCAAACTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: RAPVLETGEASR*RAQIFTSKLLL
Trigger: CAACAAGAGTTTGCTAGTAAAAATCTGAGCCCGCCATCTCGATGCTTCTCCTGTCTCTAAAACTGGTGCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CAA 72 bp CTCCTACAGGGCATTTCCGTGACCAATCCTTTCTATTaGGGAGAAACACCTTCTGAAACCAGCAGCCACTGT +
Preference number: 6 (lower is better)
Translates to: LLQGISVTNPFY*GETPSETSSHC
Trigger: ACAGTGGCTGCTGGTTTCAGAAGGTGTTTCTCCCAAATAGAAAGGATTGGTCACGGAAATGCCCTGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 72 bp TTGATCCAGAAAAGAGCGCTTAAAAGCACAGCAAAGTaGGTCAGGGAGAGTGCCCTAGAGGATGTCTGTCTA +
Preference number: 6 (lower is better)
Translates to: LIQKRALKSTAK*VRESALEDVCL
Trigger: TAGACAGACATCCTCTAGGGCACTCTCCCTGACTCACTTTGCTGTGCTTTTAAGCGCTCTTTTCTGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CAA 72 bp AGGCAATGTGGCCGATTGCTACAAGAGACGGTGTTGTaGAACTCGGTACTTTTGGTCCCACTCATATATGTA +
Preference number: 6 (lower is better)
Translates to: RQCGRLLQETVL*NSVLLVPLIYV
Trigger: TACATATATGAGTGGGACCAAAAGTACCGAGTTCAACAACACCGTCTCTTGTAGCAATCGGCCACATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS CAA 72 bp GTAAGGCAATGTGGCCGATTGCTACAAGAGACGGTGTaGTTGAACTCGGTACTTTTGGTCCCACTCATATAT +
Preference number: 6 (lower is better)
Translates to: VRQCGRLLQETV*LNSVLLVPLIY
Trigger: ATATATGAGTGGGACCAAAAGTACCGAGTTCAACAACACCGTCTCTTGTAGCAATCGGCCACATTGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS CAA 90 bp TGGATTTCAGTAAGGCAATGTGGCCGATTGCTACAAGAGACGGTGTaGTTGAACTCGGTACTTTTGGTCCCACTCATATATGTAATCAGG +
Preference number: 6 (lower is better)
Translates to: WISVRQCGRLLQETV*LNSVLLVPLIYVIR
Trigger: CCTGATTACATATATGAGTGGGACCAAAAGTACCGAGTTCAACAACACCGTCTCTTGTAGCAATCGGCCACATTGCCTTACTGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344895.4
ENST00000420978.6
CDS CCA 72 bp AAACACCTTCTGAAACCAGCAGCCACTGTAAGGATTTaGAGTCCTTGCATATGTCCCATGCATTCTGAACAT +
Preference number: 6 (lower is better)
Translates to: KHLLKPAATVRI*SPCICPMHSEH
Trigger: ATGTTCAGAATGCATGGGACATATGCAAGGACTCCAAATCCTTACAGTGGCTGCTGGTTTCAGAAGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS TCA 72 bp AAGGATTTGGAGTCCTTGCATATGTCCCATGCATTCTaGACATCTTTGAGCATTTCCTGTGGCCACTTTCAA +
Preference number: 6 (lower is better)
Translates to: KDLESLHMSHAF*TSLSISCGHFQ
Trigger: TTGAAAGTGGCCACAGGAAATGCTCAAAGATGTTCAGAATGCATGGGACATATGCAAGGACTCCAAATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420978.6
CDS CAA 72 bp ATAAAGATGGTTTACTGTTGTTTCAGTAAAGGTCGATaGAAGCGACGCCACAATCCTTGTAATTGTGACACT +
Preference number: 6 (lower is better)
Translates to: IKMVYCCFSKGR*KRRHNPCNCDT
Trigger: AGTGTCACAATTACAAGGATTGTGGCGTCGCTTCAATCGACCTTTACTGAAACAACAGTAAACCATCTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344895.4
ENST00000379706.4
ENST00000420978.6