RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC22D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196428

Ensembl transcript IDs: ENST00000361875.7, ENST00000466814.1, ENST00000480589.1, ENST00000485421.1

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTTaGGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGAT +
Preference number: 1 (lower is better)
Translates to: GGCVGCGGCAITACC*EVLPGLACWVGSWD
Trigger: ATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 90 bp GCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTaGTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAATTGAT +
Preference number: 1 (lower is better)
Translates to: ALAAEAVLSLLAVEK*YQDWPVGLGVGIID
Trigger: ATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 90 bp AGTGGGGAAGTCACTGCCTGCCTGTCTCCAATGCAATTCTGTGGCTaGCCTAGGAGCCTTGTTTATACTTTTAAGCCATTGAGTTCTCTT +
Preference number: 1 (lower is better)
Translates to: SGEVTACLSPMQFCG*PRSLVYTFKPLSSL
Trigger: AAGAGAACTCAATGGCTTAAAAGTATAAACAAGGCTCCTAGGGCAGCCACAGAATTGCATTGGAGACAGGCAGGCAGTGACTTCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 90 bp GAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAA +
Preference number: 1 (lower is better)
Translates to: EAVLSLLAVEKCYQD*PVGLGVGIIDHCLK
Trigger: TTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR TCA 90 bp AGTTCTCTTTTCTTGTGCTTGGAACACCCTTCCCTCTGGCTCTTATaGCCTTCAAGACTCAGGTGTCATGTTTTTGAGGAAACCTACCCT +
Preference number: 1 (lower is better)
Translates to: SSLFLCLEHPSLWLL*PSRLRCHVFEETYP
Trigger: AGGGTAGGTTTCCTCAAAAACATGACACCTGAGTCTTGAAGGTCATAAGAGCCAGAGGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 90 bp AATTCTGTGGCTGCCCTAGGAGCCTTGTTTATACTTTTAAGCCATTaGGTTCTCTTTTCTTGTGCTTGGAACACCCTTCCCTCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: NSVAALGALFILLSH*VLFSCAWNTLPSGS
Trigger: AGAGCCAGAGGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACTCAATGGCTTAAAAGTATAAACAAGGCTCCTAGGGCAGCCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCACACAAGGATAGATTGCTTTCAGTTT +
Preference number: 1 (lower is better)
Translates to: GQTHNQSMATCFRIK*KEHQWHTRIDCFQF
Trigger: AAACTGAAAGCAATCTATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR TCA 90 bp GTGTGGGGAAAATGTTCCCTTGCTGTCTCTGATCTTCCTCAGGTATaGTATGACCTATCTATAGATACATTGCATGCCTGTGAAATGACA +
Preference number: 1 (lower is better)
Translates to: VWGKCSLAVSDLPQV*YDLSIDTLHACEMT
Trigger: TGTCATTTCACAGGCATGCAATGTATCTATAGATAGGTCATATCATACCTGAGGAAGATCAGAGACAGCAAGGGAACATTTTCCCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 90 bp GAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAATTaGTCATTGCTTGAAAGAGATTTTAACAGTGCATTTTCTCGTTCA +
Preference number: 1 (lower is better)
Translates to: EVLPGLACWVGSWDN*SLLERDFNSAFSRS
Trigger: TGAACGAGAAAATGCACTGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 90 bp TCCAGGTATGCTGAACAAATTCAACAACTAAATGGACTGCGCCAGTaGAAAATACCAGCGTCTTACTTTGCCATCACCAATCTGAAAATC +
Preference number: 1 (lower is better)
Translates to: SRYAEQIQQLNGLRQ*KIPASYFAITNLKI
Trigger: GATTTTCAGATTGGTGATGGCAAAGTAAGACGCTGGTATTTTGCACTGGCGCAGTCCATTTAGTTGTTGAATTTGTTCAGCATACCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 90 bp CTGAGAATGAAAAATAAAGCTAACTCACTCACCATCCAGGTATGCTaGACAAATTCAACAACTAAATGGACTGCGCCAGTGCAAAATACC +
Preference number: 1 (lower is better)
Translates to: LRMKNKANSLTIQVC*TNSTTKWTAPVQNT
Trigger: GGTATTTTGCACTGGCGCAGTCCATTTAGTTGTTGAATTTGTTCAGCATACCTGGATGGTGAGTGAGTTAGCTTTATTTTTCATTCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 90 bp ATTTACAACTATTTGGAGCAGGAGACTAAATCTCCAAAGCTGAATTaGAAGTTACTTAAGATCCTAAACAATCAGCTGGGGGAAGGGTTG +
Preference number: 1 (lower is better)
Translates to: IYNYLEQETKSPKLN*KLLKILNNQLGEGL
Trigger: CAACCCTTCCCCCAGCTGATTGTTTAGGATCTTAAGTAACTTCCAATTCAGCTTTGGAGATTTAGTCTCCTGCTCCAAATAGTTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 90 bp ATTATCCTTTCCAGGGAGCAAGGAATAGATTTTAGGGAAAGGCTTTaGAATCAACATCCTAATCCTAGTCACCATAAAAGGATTCCATTT +
Preference number: 1 (lower is better)
Translates to: IILSREQGIDFRERL*NQHPNPSHHKRIPF
Trigger: AAATGGAATCCTTTTATGGTGACTAGGATTAGGATGTTGATTCCAAAGCCTTTCCCTAAAATCTATTCCTTGCTCCCTGGAAAGGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 90 bp CTGAATAAACAATATGGCACTTTAACTTTTACACTTACACTGGACTaGGCTCATTGGAGCACACAAATCATGTCCCATTCATCTTTCTAT +
Preference number: 1 (lower is better)
Translates to: LNKQYGTLTFTLTLD*AHWSTQIMSHSSFY
Trigger: ATAGAAAGATGAATGGGACATGATTTGTGTGCTCCAATGAGCTCAGTCCAGTGTAAGTGTAAAAGTTAAAGTGCCATATTGTTTATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 90 bp AGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTaGTTTAACATCACTAGTATCATATGTATTACAGGTATTGTCTTT +
Preference number: 1 (lower is better)
Translates to: SICVCVCVCVCVCVM*FNITSIICITGIVF
Trigger: AAAGACAATACCTGTAATACATATGATACTAGTGATGTTAAATCACATCACACACACACACACACACACACACACACACACACAAATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp TGGAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTaGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGA +
Preference number: 2 (lower is better)
Translates to: WRLRWLRRLCYHCLL*RSATRIGLLGWELG
Trigger: TCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR-3UTR CCA 90 bp AGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCGGAGTGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: SFMLRRHSAAVEVALAAECFRIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCA...CTCCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
3UTR-3UTR TCA 90 bp TGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGATCAACAGCGCTGCATaGCATCTCAGAGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: CYHCLLLRSATRIGLLGWINSAA*HLRERK
Trigger: TTTCCTCTCTCTGAGATGTCATGCAGCGCTGTTGAT...CCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
3UTR-3UTR GCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCT +
Preference number: 2 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTGGACAAAGGGATaGTTCCTGTCCCAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: STLYSICVCVCVCVCVCVHWTKG*FLSQAG
Trigger: TCCTGCCTGGGACAGGAATCATCCCTTTGTCCAGTG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGGACATCAACAGCGCTaGATGACATCTCAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMGHQQR*MTSQRE
Trigger: CTCTCTCTGAGATGTCATGCAGCGCTGTTGATGTCC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR CAA 90 bp CAATTCTGTGGCTGCCCTAGGAGCCTTGTTTATACTTTTAAGCCATaGAGTTCTCTTTTCTTGTGCTTGGAACACCCTTCCCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: QFCGCPRSLVYTFKP*SSLFLCLEHPSLWL
Trigger: GAGCCAGAGGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACTCAATGGCTTAAAAGTATAAACAAGGCTCCTAGGGCAGCCACAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGATCAACAGCGCTGCATaGCATCTCAGAGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMINSAA*HLRERK
Trigger: TTTCCTCTCTCTGAGATGTCATGCAGCGCTGTTGAT...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR GCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCCAAAGCATGGCTACTTaGTTTCGTATAAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCQSMAT*FRIKWK
Trigger: TTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTG...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
3UTR CAA 90 bp CTTCCCTCTGGCTCTTATGACCTTCAAGACTCAGGTGTCATGTTTTaGAGGAAACCTACCCTGACAAAACCATCCCTGACTGTACATAGT +
Preference number: 2 (lower is better)
Translates to: LPSGSYDLQDSGVMF*RKPTLTKPSLTVHS
Trigger: ACTATGTACAGTCAGGGATGGTTTTGTCAGGGTAGGTTTCCTCAAAAACATGACACCTGAGTCTTGAAGGTCATAAGAGCCAGAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp TGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGCAGATGCACAATTTATaGCCTGATGACACTCTTGTG +
Preference number: 2 (lower is better)
Translates to: CYQDWPVGLGVGIIDHCLQMHNL*PDDTLV
Trigger: CACAAGAGTGTCATCAGGTCATAAATTGTGCATCTG...CAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
3UTR-3UTR GCA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGTTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 2 (lower is better)
Translates to: HCLLLRSATRIGLLGWELFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485421.1
3UTR-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACTCAGGGTAAATCCATaGGTAATAGGAAACATGGGA +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGLRVNP*VIGNMG
Trigger: TCCCATGTTTCCTATTACCCATGGATTTACCCTGAG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAATCAACAGCGCTGCATaGCATCTCAGAGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEINSAA*HLRERK
Trigger: TTTCCTCTCTCTGAGATGTCATGCAGCGCTGTTGAT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGACATCAACAGCGCTaGATGACATCTCAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGHQQR*MTSQRE
Trigger: CTCTCTCTGAGATGTCATGCAGCGCTGTTGATGTCC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCCTCCCATCTGCCACTaGAATTGTGCACATCCAGCA +
Preference number: 2 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLPPICH*NCAHPA
Trigger: TGCTGGATGTGCACAATTCCAGTGGCAGATGGGAGG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGAGAAAAGGTCTaGTTTTGGATAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: STLYSICVCVCVCVCVCVVGEKV*FWIGRR
Trigger: TCTCCTGCCTATCCAAAACCAGACCTTTTCTCCCAC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAGACTACCTGTACAGTTaGACTATGTTCTTCATACTT +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGDYLYS*TMFFIL
Trigger: AAGTATGAAGAACATAGTGCAACTGTACAGGTAGTC...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACATGAGGTACGAAAGTaGTTCAAAGATTATAGGTCA +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGHEVRK*FKDYRS
Trigger: TGACCTATAATCTTTGAACCACTTTCGTACCTCATG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACTCCTGTCGTTACACTaGAAAGCTTATTATTTAAGG +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGLLSLH*KAYYLR
Trigger: CCTTAAATAATAAGCTTTCCAGTGTAACGACAGGAG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAACTGTGCCTCCAAATTaGGATCTCAATCAGTTAATA +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGTVPPN*DLNQLI
Trigger: TATTAACTGATTGAGATCCCAATTTGGAGGCACAGT...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp TGTCTAATACTGAAAAGGCCAAACACACAACCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGAT +
Preference number: 2 (lower is better)
Translates to: CLILKRPNTQPKHGY*LSYKVERTPVAHKD
Trigger: ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCCTTTTCAGTATTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAACAATGGACCATaGGTTGAGTATCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: STLYSICVCVCVCVCVCVLNNGP*VEYLLL
Trigger: CAGGAGAAGATACTCAACTCATGGTCCATTGTTCAA...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCAAAGCATGGCTACTTaGTTTCGTATAAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMQSMAT*FRIKWK
Trigger: TTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR GCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATCCATTACACAGCTTTaGTTCTTTGGTTACAAAGTA +
Preference number: 2 (lower is better)
Translates to: ISQLPVSATLTYLPSATGSITQL*FFGYKV
Trigger: TACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTATCACAATAACTGGTaGCTACCTGTACAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYYHNNW*LPVQLH
Trigger: GTGCAACTGTACAGGTAGTCACCAGTTATTGTGATA...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCAAAGCATGGCTACTTaGTTTCGTATAAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDQSMAT*FRIKWK
Trigger: TTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATATGGCTACAGATGCAGTaGATGTTAATTTCTACAGGC +
Preference number: 2 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIWLQMQ*MLISTG
Trigger: GCCTGTAGAAATTAACATGCACTGCATCTGTAGCCA...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAGTTCTCTTTTCTTGTaGTTGGAACACCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLSSLFL*LEHPSL
Trigger: GAGGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCAGCGTCTTACTTTaGCATCACCAATCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: STLYSICVCVCVCVCVCVTSVLL*HHQSEN
Trigger: ATTTTCAGATTGGTGATGGCAAAGTAAGACGCTGGT...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPCFRIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGACAGAAAAGCTTATGTaGGACCTTGCTCTATGGGCA +
Preference number: 2 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLTEKLM*DLALWA
Trigger: TGCCCATAGAGCAAGGTCCCACATAAGCTTTTCTGT...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp GGAGTTAAGGAAACTGTTTATTTAATGCCTCCTAACCCCTACTATTaGTTTTTGGTGTGGCAAGCTGTGAGATCACATCGGAACAAACTA +
Preference number: 2 (lower is better)
Translates to: GVKETVYLMPPNPYY*FLVWQAVRSHRNKL
Trigger: TAGTTTGTTCCGATGTGATCTCACAGCTTGCCACACCAAAAACAAATAGTAGGGGTTAGGAGGCATTAAATAAACAGTTTCCTTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp ACCTACCTCCCATCTGCCACTGGAATTGTGCACATCCAGCATAATTaGAGCATAGTATCCCATTGCTTAAAACCATTCAATAAATCATTC +
Preference number: 2 (lower is better)
Translates to: TYLPSATGIVHIQHN*SIVSHCLKPFNKSF
Trigger: GAATGATTTATTGAATGGTTTTAAGCAATGGGATACTATGCTCAAATTATGCTGGATGTGCACAATTCCAGTGGCAGATGGGAGGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp ACAATATGGCACTTTAACTTTTACACTTACACTGGACTGAGCTCATaGGAGCACACAAATCATGTCCCATTCATCTTTCTATCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: TIWHFNFYTYTGLSS*EHTNHVPFIFLSPN
Trigger: GTTTGGGGATAGAAAGATGAATGGGACATGATTTGTGTGCTCCAATGAGCTCAGTCCAGTGTAAGTGTAAAAGTTAAAGTGCCATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGTATCACAATAACTGGTaGCTACCTGTACAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLYHNNW*LPVQLH
Trigger: GTGCAACTGTACAGGTAGTCACCAGTTATTGTGATA...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR TCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTACATTGCATGCCTGTaGAATGACAGCAAGAACTGT +
Preference number: 2 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLYIACL*NDSKNC
Trigger: ACAGTTCTTGCTGTCATTTCACAGGCATGCAATGTA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLCFRIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp TCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTaGGCTTATTATGTCCTCAAATTGTCAATTTTGAGGGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SLTVHSNKYSSLHYQ*AYYVLKLSILRAGF
Trigger: AAACCCAGCCCTCAAAATTGACAATTTGAGGACATAATAAGCCAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp GCCTGTGAAATGACAGCAAGAACTGTGATCCGGATAACATTTGGATaGCAGCAGGCAAGAGTATTTTACAGTTGTTATATGGAAATATTG +
Preference number: 2 (lower is better)
Translates to: ACEMTARTVIRITFG*QQARVFYSCYMEIL
Trigger: CAATATTTCCATATAACAACTGTAAAATACTCTTGCCTGCTGCAATCCAAATGTTATCCGGATCACAGTTCTTGCTGTCATTTCACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGAGGTCCATGAATTACTaGAGTTTGCAACTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLRSMNY*SLQLGE
Trigger: TTCTCCAAGTTGCAAACTCCAGTAATTCATGGACCT...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp GATCCGGATAACATTTGGATTGCAGCAGGCAAGAGTATTTTACAGTaGTTATATGGAAATATTGTAGGCATGCAAAAGAATGGAGAGATG +
Preference number: 2 (lower is better)
Translates to: DPDNIWIAAGKSILQ*LYGNIVGMQKNGEM
Trigger: CATCTCTCCATTCTTTTGCATGCCTACAATATTTCCATATAACAACTGTAAAATACTCTTGCCTGCTGCAATCCAAATGTTATCCGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATATACATCCCAATTTTATaGCTTGTTTGTTTGTGGCTA +
Preference number: 2 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIYIPIL*LVCLWL
Trigger: TAGCCACAAACAAACAAGGCATAAAATTGGGATGTA...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGAAAGCAGAGGAATCGTaGCAATTTCTCTTAGAAAGT +
Preference number: 2 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLKAEES*QFLLES
Trigger: ACTTTCTAAGAGAAATTGCCACGATTCCTCTGCTTT...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATATCTCCAAAGCTGAATTaGAAGTTACTTAAGATCCTA +
Preference number: 2 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLISPKLN*KLLKIL
Trigger: TAGGATCTTAAGTAACTTCCAATTCAGCTTTGGAGA...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp TGTGCCTCCAAATTGGGATCTCAATCAGTTAATATTTACAACTATTaGGAGCAGGAGACTAAATCTCCAAAGCTGAATTGGAAGTTACTT +
Preference number: 2 (lower is better)
Translates to: CASKLGSQSVNIYNY*EQETKSPKLNWKLL
Trigger: AAGTAACTTCCAATTCAGCTTTGGAGATTTAGTCTCCTGCTCCAAATAGTTGTAAATATTAACTGATTGAGATCCCAATTTGGAGGCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 90 bp CATCAAACATTACAGTTAAAGCTAATGCACGCTACCAAACTACTGTaGACAGTTTGGTTAGTATCCTTCCAGACCTTCTCTCTATATAAT +
Preference number: 2 (lower is better)
Translates to: HQTLQLKLMHATKLL*TVWLVSFQTFSLYN
Trigger: ATTATATAGAGAGAAGGTCTGGAAGGATACTAACCAAACTGTCAACAGTAGTTTGGTAGCGTGCATTAGCTTTAACTGTAATGTTTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGATGTGCATTTTCAAATaGACAGGGTATATAGCTTCA +
Preference number: 2 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLMCIFK*TGYIAS
Trigger: TGAAGCTATATACCCTGTCCATTTGAAAATGCACAT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR GCA 72 bp GCGGAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTaGTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGG +
Preference number: 3 (lower is better)
Translates to: AEAVLSLLAVEK*YQDWPVGLGVG
Trigger: CCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 72 bp TGGAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTG +
Preference number: 3 (lower is better)
Translates to: WRLRWLRRLCYH*LLLRSATRIGL
Trigger: CAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 72 bp CTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTaGGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGC +
Preference number: 3 (lower is better)
Translates to: LYAEETFGCCGG*VGCGGCAITAC
Trigger: GCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR GCA 72 bp ATAGATGCCAAAATACTAGGTCAGTGGGGAAGTCACTaGCTGCCTGTCTCCAATGCAATTCTGTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: IDAKILGQWGSH*LPVSNAILWLP
Trigger: GGGCAGCCACAGAATTGCATTGGAGACAGGCAGGCAGTGACTTCCCCACTGACCTAGTATTTTGGCATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CAA 90 bp TGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCT +
Preference number: 3 (lower is better)
Translates to: CYHCLLLRSATRIGLLGWACSIL*SMATTP
Trigger: AGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...CCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485421.1
3UTR CCA 72 bp CTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTTGGGATAATTGATCAT +
Preference number: 3 (lower is better)
Translates to: LSLLAVEKCYQD*PVGLGVGIIDH
Trigger: ATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR-3UTR CAA 90 bp TGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGCCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAA +
Preference number: 3 (lower is better)
Translates to: CYQDWPVGLGVGIIDHCLPKHGY*LSYKVE
Trigger: TTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGG...CAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
3UTR-3UTR CAA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACCAGTCACTGGAGGCTaGATTATAAAACGTTATCTC +
Preference number: 3 (lower is better)
Translates to: ISQLPVSATLTYLPSATGPVTGG*IIKRYL
Trigger: GAGATAACGTTTTATAATCAAGCCTCCAGTGACTGG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp TTCTTGTGCTTGGAACACCCTTCCCTCTGGCTCTTATaGCCTTCAAGACTCAGGTGTCATGTTTTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: FLCLEHPSLWLL*PSRLRCHVFEE
Trigger: TTCCTCAAAAACATGACACCTGAGTCTTGAAGGTCATAAGAGCCAGAGGGAAGGGTGTTCCAAGCACAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp GCTGCCCTAGGAGCCTTGTTTATACTTTTAAGCCATTaGGTTCTCTTTTCTTGTGCTTGGAACACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: AALGALFILLSH*VLFSCAWNTLP
Trigger: GGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACTCAATGGCTTAAAAGTATAAACAAGGCTCCTAGGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAA +
Preference number: 3 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMPKHGY*LSYKVE
Trigger: TTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR CAA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATTTACAACTAGTGTATaGTACACTAGCTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: ISQLPVSATLTYLPSATGFTTSV*YTSSAP
Trigger: TGGAGCTGAGCTAGTGTACAATACACTAGTTGTAAA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp TCCCCCATCATGGAGGATATTTTCCAAGACCCTCACTaGATGCCTGAAACCATGAATAATACCAAACCCTCT +
Preference number: 3 (lower is better)
Translates to: SPIMEDIFQDPH*MPETMNNTKPS
Trigger: AGAGGGTTTGGTATTATTCATGGTTTCAGGCATTCAGTGAGGGTCTTGGAAAATATCCTCCATGATGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 72 bp CACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCACACAAGGATAGATTGC +
Preference number: 3 (lower is better)
Translates to: HNQSMATCFRIK*KEHQWHTRIDC
Trigger: GCAATCTATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
3UTR GCA 72 bp GCTGAACAAATTCAACAACTAAATGGACTGCGCCAGTaGAAAATACCAGCGTCTTACTTTGCCATCACCAAT +
Preference number: 3 (lower is better)
Translates to: AEQIQQLNGLRQ*KIPASYFAITN
Trigger: ATTGGTGATGGCAAAGTAAGACGCTGGTATTTTGCACTGGCGCAGTCCATTTAGTTGTTGAATTTGTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 72 bp TTCCAATTTCATAGTATTACAGTAGCTCCCCCATCATaGAGGATATTTTCCAAGACCCTCACTGAATGCCTG +
Preference number: 3 (lower is better)
Translates to: FQFHSITVAPPS*RIFSKTLTECL
Trigger: CAGGCATTCAGTGAGGGTCTTGGAAAATATCCTCCATGATGGGGGAGCTACTGTAATACTATGAAATTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 72 bp TCCAGGGAGCAAGGAATAGATTTTAGGGAAAGGCTTTaGAATCAACATCCTAATCCTAGTCACCATAAAAGG +
Preference number: 3 (lower is better)
Translates to: SREQGIDFRERL*NQHPNPSHHKR
Trigger: CCTTTTATGGTGACTAGGATTAGGATGTTGATTCCAAAGCCTTTCCCTAAAATCTATTCCTTGCTCCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAA +
Preference number: 3 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIPKHGY*LSYKVE
Trigger: TTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CAA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGTAAAATGCAGACTTaGCTCGCTTTAATAAACCCC +
Preference number: 3 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGKMQT*LALINP
Trigger: GGGGTTTATTAAAGCGAGCAAAGTCTGCATTTTACC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGGTAAAATGCAGACTTaGCTCGCTTTAATAAACCCC +
Preference number: 3 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPGKMQT*LALINP
Trigger: GGGGTTTATTAAAGCGAGCAAAGTCTGCATTTTACC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAAGTCATACGAAATGTaGAAAAGCAGAGGAATCGTG +
Preference number: 3 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIKSYEM*KSRGIV
Trigger: CACGATTCCTCTGCTTTTCAACATTTCGTATGACTT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGTACACATCCTTAGGGTaGCTTACTCAAGCCTATGTA +
Preference number: 3 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLYTSLG*LTQAYV
Trigger: TACATAGGCTTGAGTAAGCAACCCTAAGGATGTGTA...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp AAAAATAAAGCTAACTCACTCACCATCCAGGTATGCTaGACAAATTCAACAACTAAATGGACTGCGCCAGTG +
Preference number: 3 (lower is better)
Translates to: KNKANSLTIQVC*TNSTTKWTAPV
Trigger: CACTGGCGCAGTCCATTTAGTTGTTGAATTTGTTCAGCATACCTGGATGGTGAGTGAGTTAGCTTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp AAATGTTCCCTTGCTGTCTCTGATCTTCCTCAGGTATaGTATGACCTATCTATAGATACATTGCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: KCSLAVSDLPQV*YDLSIDTLHAC
Trigger: ACAGGCATGCAATGTATCTATAGATAGGTCATATCATACCTGAGGAAGATCAGAGACAGCAAGGGAACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp CAATATGGCACTTTAACTTTTACACTTACACTGGACTaGGCTCATTGGAGCACACAAATCATGTCCCATTCA +
Preference number: 3 (lower is better)
Translates to: QYGTLTFTLTLD*AHWSTQIMSHS
Trigger: TGAATGGGACATGATTTGTGTGCTCCAATGAGCTCAGTCCAGTGTAAGTGTAAAAGTTAAAGTGCCATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 72 bp TTAATGCCTCCTAACCCCTACTATTTGTTTTTGGTGTaGCAAGCTGTGAGATCACATCGGAACAAACTAAAT +
Preference number: 3 (lower is better)
Translates to: LMPPNPYYLFLV*QAVRSHRNKLN
Trigger: ATTTAGTTTGTTCCGATGTGATCTCACAGCTTGCCACACCAAAAACAAATAGTAGGGGTTAGGAGGCATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp TTCCATGCCGGACATGTAGGACTCTCTCTTTTTCATTaGTACTTAATACTTCATCATGTGTACCATAGTCCA +
Preference number: 3 (lower is better)
Translates to: FHAGHVGLSLFH*YLILHHVYHSP
Trigger: TGGACTATGGTACACATGATGAAGTATTAAGTATCAATGAAAAAGAGAGAGTCCTACATGTCCGGCATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTaGTTTAACATCACTAGTATCATATGTATTACAGGT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVCVM*FNITSIICITG
Trigger: ACCTGTAATACATATGATACTAGTGATGTTAAATCACATCACACACACACACACACACACACACACACACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR TCA 72 bp TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGATTTAACATCACTAGTATCATATGTATTA +
Preference number: 3 (lower is better)
Translates to: FVCVCVCVCVCV*CDLTSLVSYVL
Trigger: TAATACATATGATACTAGTGATGTTAAATCACATCACACACACACACACACACACACACACACACACACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CCA 72 bp CATTTAAAGGGATCTTGCTGTAGAAATTCTGTGAACTaGTACAGAAATACAGGACAAAGATGTATCCTGAAA +
Preference number: 3 (lower is better)
Translates to: HLKGSCCRNSVN*YRNTGQRCILK
Trigger: TTTCAGGATACATCTTTGTCCTGTATTTCTGTACCAGTTCACAGAATTTCTACAGCAAGATCCCTTTAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR GCA 72 bp GTGCACATCCAGCATAATTTGAGCATAGTATCCCATTaGTTAAAACCATTCAATAAATCATTCTTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: VHIQHNLSIVSH*LKPFNKSFLLS
Trigger: AGAAAGCAAGAATGATTTATTGAATGGTTTTAAGCAATGGGATACTATGCTCAAATTATGCTGGATGTGCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACGTGAGGGGCGGTGCTaGCCCGCTCGGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGREGRC*PARAPQ
Trigger: CTGAGGAGCCCGAGCGGGGCAGCACCGCCCCTCACG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCGGCTGCTGTGGAGGTTaGGTTGGCTGCGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCGCCGG*VGCGGC
Trigger: ACAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCC...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp CTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATATTGGTGCGCTGTGTGTaGCTGGCGCTAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAVEKCYQDWPVGLGVGILVRCV*LALRAA
Trigger: GGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAA...TATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR GCA 90 bp CTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAGGCTGCTGTGGAGGTTaGGTTGGCTGCGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAVEKCYQDWPVGLGVGIGCCGG*VGCGGC
Trigger: ACAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCC...TATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAGGCGGAAACCCGCTCTaGGGGAGGGGAAAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGGGNPL*GRGKPA
Trigger: AGCCGGCTTTCCCCTCCCCCAGAGCGGGTTTCCGCC...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAGTCTCCGGGCAGCCGTaGTCAGTCCAGCTCGGCGCT +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGVSGQP*SVQLGA
Trigger: AGCGCCGAGCTGGACTGACCACGGCTGCCCGGAGAC...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCAGGGGCGGGCCGGCTaGTTCCTCTCTCGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDQGRAG*FLSRLR
Trigger: CCGGAGACGAGAGAGGAAGCAGCCGGCCCGCCCCTG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGGCCCGTGCGCCCCCTaGATGGAGGCCACTACTACC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMGPCAP*MEATTT
Trigger: GGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCAAGGGCAGCCCAACATaGTGGATTATGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EVALAAEAVLSLLAVEKCKGSPT*WIMLLL
Trigger: GAGCAGCAGCATAATCCAGCATGTTGGGCTGCCCTT...GCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR GCA 90 bp TGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGAGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLLLRSATRIGLLGWELGEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...TCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAGCCCCACCTACGGGTaGCGGCGGCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKESPTYG*RRRLWL
Trigger: CAGCCACAGCCGCCGCCGCCACCCGTAGGTGGGGCT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCCTGTGGAGGTTGCGTTaGCTGCGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCGCAGCCAACGCAACCTCCACAG...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
3UTR CAA 72 bp AGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTaGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RLRWLRRLCYHC*LLRSATRIGLL
Trigger: CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGCTCCTCAGGCCGGTaGCGGCGTCAGCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGSSGR*RRQRWA
Trigger: AGCCCAGCGCTGACGCCGGCACCGGCCTGAGGAGCC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGGGCTGCGCGGCTaGCATCATTGGCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVAGLRG*HHWLRP
Trigger: GGGCCGCAGCCAATGATGGCAGCCGCGCAGCCCAGC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATAACTGCTGGGGCTGCTaGGCCGCGGGGGCGCCCACT +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYNCWGC*AAGAPT
Trigger: AGTGGGCGCCCCCGCGGCGCAGCAGCCCCAGCAGTT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGTGGCTGCGGAGGCTGTaGTATCACTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HCLLLRSATRIGLLGWELWLRRL*YHCLLL
Trigger: CAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCA...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp AGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCACT +
Preference number: 4 (lower is better)
Translates to: RLCYHCLLLRSATRIGLLGGCVG*GGCAIT
Trigger: AGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCC...CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAGGATACGCGAACTGCTaGGGCTGCTGCGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEGYANC*GCCAAG
Trigger: CCCCGCGGCGCAGCAGCCCCAGCAGTTCGCGTATCC...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCTCTGGCCGGAGGGCTaGACGGGCAGCAAATGTCCG +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLWPEG*TGSKCP
Trigger: CGGACATTTGCTGCCCGTCCAGCCCTCCGGCCAGAG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGCTGTGGAGGTTGCGTTaGCTGCGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RLCYHCLLLRSATRIGLLLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCGCAGCCAACGCAACCTCCACAG...CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGGGGAAGACGCGCCCATaGGCTGCGCGCCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLGKTRP*AARPPR
Trigger: CCTCGGTGGGCGCGCAGCTCATGGGCGCGTCTTCCC...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGGCACTCCAGTCGGCTaGCAAGGCGCGACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIGTPVG*QGATCP
Trigger: CGGGCAGGTCGCGCCTTGTCAGCCGACTGGAGTGCC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCATCAACAGCGCTGCATaGCATCTCAGAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EVALAAEAVLSLLAVEKCINSAA*HLRERK
Trigger: TTTCCTCTCTCTGAGATGTCATGCAGCGCTGTTGAT...GCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTGGAGCGGGCACGGCTaGAGGCACGTTTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMWSGHG*RHVWNS
Trigger: GGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTTGGTGCGCTGTGTGTaGCTGGCGCTAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLVRCV*LALRAA
Trigger: GGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGTTTGCCAGGGAATCTaGAACAGGCGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: HCLLLRSATRIGLLGWELVCQGI*NRRLHN
Trigger: GTTGTGAAGCCGCCTGTTGCAGATTCCCTGGCAAAC...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCGTTTGCCAGGGAATCTaGAACAGGCGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCVCQGI*NRRLHN
Trigger: GTTGTGAAGCCGCCTGTTGCAGATTCCCTGGCAAAC...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATGCAGCTCCCTCCGCTaGGCCAAGATGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGCSSLR*AKMGLK
Trigger: TTTCAGCCCCATCTTGGCCCAGCGGAGGGAGCTGCA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCCGCCGCCAGGGTACTaGCGAGCGCCCCAGACACGC +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLPPPGY*RAPQTR
Trigger: GCGTGTCTGGGGCGCTCGCCAGTACCCTGGCGGCGG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCGCGGCTGCCATCATTaGCTGCGGCCCGGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLRGCHH*LRPGRG
Trigger: GCCGCGACCGGGCCGCAGCCAATGATGGCAGCCGCG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCACACTAGGCACGCTTaGAGCGGGCACGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDHTRHA*SGHGCR
Trigger: CCTGCAGCCGTGCCCGCTCCAAGCGTGCCTAGTGTG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGCGCTGGCCGCCCGGTaGGACATCCTCCTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPALAAR*DILLLV
Trigger: AACGAGGAGGAGGATGTCTCACCGGGCGGCCAGCGC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGCCACCAGGTACGGCTaGCAGCGGACCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIATRYG*QRTTAT
Trigger: GGTGGCAGTGGTCCGCTGTCAGCCGTACCTGGTGGC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCAGGGACATGTCGACTaGCTCAGGCGGAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMQGHVD*LRRKPA
Trigger: AGCGGGTTTCCGCCTGAGGCAGTCGACATGTCCCTG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCACGGTCTCTTCGGCTCTaGCCCCGTCTCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPRSLRL*PRLSPA
Trigger: CGCGGGACTGAGACGGGGGCAGAGCCGAAGAGACCG...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATGGGGCTGGCTGGGCTaGGCGGCTGCCATCATTGGC +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPWGWLG*AAAIIG
Trigger: GCCAATGATGGCAGCCGCGCAGCCCAGCCAGCCCCA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATTGCAGGCCGGCCACGTaGTGCTGCAGGTACTCACTC +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDCRPAT*CCRYSL
Trigger: GAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCA...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACCACTGCCACCCATCTaGGGCGGAGGCACGGACTGG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIPLPPI*GGGTDW
Trigger: CCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATGGCTGCTGTGGAGGTTaGGTTGGCTGCGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDGCCGG*VGCGGC
Trigger: ACAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCC...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGCACGCCGGCTCCTCTaGGTCCTGTCGGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIARRLL*VLSETG
Trigger: CCCGGTTTCCGACAGGACCCAGAGGAGCCGGCGTGC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCGACTCCTCCTCCGTTaGCGGGAGCAGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLRLLLR*REQQPP
Trigger: CGGCGGCTGCTGCTCCCGCCAACGGAGGAGGAGTCG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGGGCCAAGATGGGGCTaGAATGGCCGCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIGPRWG*NGRARD
Trigger: ATCCCTGGCGCGGCCATTTCAGCCCCATCTTGGCCC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGCTGGGCTCTCTGACTaGGGGAAGGAGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPAGLSD*GKERRV
Trigger: GACTCGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTCCCGTGGTCCAGCTTaGTCACGCGAAAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMSRGPA*SRENGN
Trigger: GTTCCCGTTTTCGCGTGATCAAGCTGGACCACGGGA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCCGGGCACCACGGCGTaGGGGCCACCAGGTACGGCT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGPGTTA*GPPGTA
Trigger: AGCCGTACCTGGTGGCCCTCACGCCGTGGTGCCCGG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCATCACTGCTTGCTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCITACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGAT...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGGCTCCTCCTCGGTaGGCCCAATTCCTAAACCCC +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVPAPPR*AQFLNP
Trigger: GGGGTTTAGGAATTGGGCGCACCGAGGAGGAGCCGG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAGGCCGGCCACGTGCTaGTGCAGGTACTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKERPATC*CRYSLW
Trigger: CCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAAGCATTCTGGCCGGTaGCCACGGGAAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIKHSGR*PREGWP
Trigger: CGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGACCGAGGCACGGCTaGACCACGCCTCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGPRHG*TTPPTV
Trigger: TACTGTGGGAGGCGTGGTGCAGCCGTGCCTCGGTCC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACTGACAGCGGACCACTaGCACCCATCTGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLILTADH*HPSAAE
Trigger: CTCCGCCGCAGATGGGTGGCAGTGGTCCGCTGTCAG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCTAGTATCGTCGACTTaGCCGACTAAAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVLVSST*PTKGWV
Trigger: GACCCAGCCTTTAGTCGGGCAAGTCGACGATACTAG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR GCA 90 bp TGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGAAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLLLRSATRIGLLGWELGRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT...TCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp GTCAATGGCTACAACACCTCCCCCAGATGCACAATTTATGACCTGATGACACTCTGGCTGCGGAGGCTGTaGTATCACTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VNGYNTSPRCTIYDLMTLWLRRL*YHCLLL
Trigger: CAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCA...GAGTGTCATCAGGTCATAAATTGTGCATCTGGGGGAGGTGTTGTAGCCATTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAGTCCGAGTCTGCGCTaGGGTCTGAGGCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLSPSLR*GLRPAA
Trigger: AGCGGCGGGCCTCAGACCCCAGCGCAGACTCGGACT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATATGCTAGTGGCCACCTaGGCCGTGGTGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDMLVAT*AVVTLV
Trigger: CACCAGTGTCACCACGGCCCAGGTGGCCACTAGCAT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAATGGCTTCGCTGGGCTaGGAAGACGCGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEMASLG*EDAPMS
Trigger: GCTCATGGGCGCGTCTTCCCAGCCCAGCGAAGCCAT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGGGCCATGGCTTCGCTaGGCTGGGAAGACGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLGPWLR*AGKTRP
Trigger: TGGGCGCGTCTTCCCAGCCCAGCGAAGCCATGGCCC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGC +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGCRHV*NSGHHG
Trigger: GCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCTGCTGACTGGCGTATaGCTGCTCAGCTGTTGCGAC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLLTGV*LLSCCD
Trigger: GTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RLCYHCLLLRSATRIGLLKCYQD*PVGLGV
Trigger: AACTCCCAACCCAACAGGCCAATCCTGGTAGCACTT...CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp CCTGATGACACTCTTGTGGACAACATTCAGTCCTTAGAAGCTAGAATAACCCTCGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PDDTLVDNIQSLEARITLDIRLL*RLRWLR
Trigger: CCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...GAGGGTTATTCTAGCTTCTAAGGACTGAATGTTGTCCACAAGAGTGTCATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGGCGCCCCGGCTGTGTaGGGTAGCGGTGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGGAPAV*GSGGGF
Trigger: GAAGCCACCACCGCTACCTCACACAGCCGGGGCGCC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGACGTCCTCTGTGCGTaGCTCGTCCGGGTCGTCCAA +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIDVLCA*LVRVVQ
Trigger: TTGGACGACCCGGACGAGTCACGCACAGAGGACGTC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAGCGGAGCCGAGCTTTaGGCCACAGCCCCACCTACG +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLSGAEL*ATAPPT
Trigger: CGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGTTCATAGGTGTTAACTaGAGGGGGTTTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CYHCLLLRSATRIGLLGWFIGVN*RGFARE
Trigger: TTCCCTGGCAAACCCCCTTCAGTTAACACCTATGAA...CCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp GAGGTTGCGTTGGCTGCGGAGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCGGGAGTTGGGATAATTaGTCATTGCTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: EVALAAEAVLSLLAVEKCGSWDN*SLLERD
Trigger: ATCTCTTTCAAGCAATGATCAATTATCCCAACTCCC...GCACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCAACGCAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGCTGCCATCATTGGCTaGGGCCCGGTCGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVAAIIG*GPVAAP
Trigger: GGGAGCCGCGACCGGGCCGCAGCCAATGATGGCAGC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCCGGCCACGTGCTGCTaGAGGTACTCACTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLPATCC*RYSLWP
Trigger: CGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTGGCTGCTCAGCTGTTaGGACTGGGCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLWLLSC*DWARGA
Trigger: CGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTTGGTGCGCTGTGTGTaGCTGGCGCTAAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYLVRCV*LALRAA
Trigger: GGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAA...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCACT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDGGCVG*GGCAIT
Trigger: AGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCC...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGGCTGCTGTGGAGGTTaGGTTGGCTGCGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPGCCGG*VGCGGC
Trigger: ACAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCAGTGGGGAAGTCACTaGCTGCCTGTCTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMQWGSH*LPVSNA
Trigger: TGCATTGGAGACAGGCAGGCAGTGACTTCCCCACTG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGGGTGGGAGGCTGAGATaGGGCTGCAGTCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLGGRLR*GCSHWP
Trigger: GGGCCAGTGACTGCAGCCCCATCTCAGCCTCCCACC...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATCGTGCGCCCCCTGCATaGAGGCCACTACTACCACCA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYRAPPA*RPLLPP
Trigger: TGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACG...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATATGGGCCGGAGTGGGCTaGCTCATTTTCTCCGACGGG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIWAGVG*LIFSDG
Trigger: CCCGTCGGAGAAAATGAGCCAGCCCACTCCGGCCCA...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATCTCAGCTGTTGCGACTaGGCCAGAGGCGCGGGTACA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYLSCCD*ARGAGT
Trigger: TGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAG...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCAGCGCTGGGCTCTCTaGCTGAGGGAAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGQRWAL*LREGAA
Trigger: CGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGCGCTG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGCGCTTATTTTCAGCAATaGGAGAAAGTGGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RKLYAEETFGCCGGCVGCAYFQQ*EKVVVE
Trigger: CTCAACCACCACTTTCTCTCATTGCTGAAAATAAGC...GCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR TCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGGCGGGCGGGGGAGATaGCTTGAGGTCAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLGGRGR*LEVRSS
Trigger: TGAACTCCTGACCTCAAGTCATCTCCCCCGCCCGCC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGCAGATGCACAATTTATaGCCTGATGACACTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HCLLLRSATRIGLLGWELQMHNL*PDDTLV
Trigger: CACAAGAGTGTCATCAGGTCATAAATTGTGCATCTG...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAGGAGACGTCCTCTGTaGGTGACTCGTCCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIRRRPL*VTRPGR
Trigger: ACGACCCGGACGAGTCACGCACAGAGGACGTCTCCT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGACATAGCCGGCTaGGCCAGGGTTACATTCGTC +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVRDIAG*ARVTFV
Trigger: GACGAATGTAACCCTGGCGCAGCCGGCTATGTCCCT...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGACGCGCCCATGAGCTaGGCGCCCACCGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGDAPMS*APTEEA
Trigger: TGCTTCCTCGGTGGGCGCGCAGCTCATGGGCGCGTC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGTTTGCCAGGGAATCTaGAACAGGCGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMVCQGI*NRRLHN
Trigger: GTTGTGAAGCCGCCTGTTGCAGATTCCCTGGCAAAC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCACT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVGGCVG*GGCAIT
Trigger: AGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCTAAAACTCTGCGGCTaGGCCGGAGTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLLKLCG*AGVGWL
Trigger: GAGCCAGCCCACTCCGGCCCAGCCGCAGAGTTTTAG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGACCGAGGAAGCATTCTaGCCGGTGCCCACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLTEEAF*PVPTGR
Trigger: CCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGGT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTGGAGGTTGCGTTaGCTGCGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCGCAGCCAACGCAACCTCCACAG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp TGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WPVGLGVGIIDHCLKEILDIRLL*RLRWLR
Trigger: CCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...TAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTTTAAGAGTCACGGGCTaGTCCAGGCGCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGLRVTG*SRRWPP
Trigger: GGGCGGCCAGCGCCTGGATCAGCCCGTGACTCTTAA...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGTCTGCGCTGGGGTCTaGGGCCCGCCGCTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVVCAGV*GPPLLR
Trigger: TCTTAACAGCGGCGGGCCTCAGACCCCAGCGCAGAC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGGAGTTGGGATAATTaGTCATTGCTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: HCLLLRSATRIGLLGWELGSWDN*SLLERD
Trigger: ATCTCTTTCAAGCAATGATCAATTATCCCAACTCCC...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAATCACTGCTTGCTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGITACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGAT...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCTAGTATCGTCGACTTaGCCGACTAAAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDLVSST*PTKGWV
Trigger: GACCCAGCCTTTAGTCGGGCAAGTCGACGATACTAG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp TGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCACT +
Preference number: 4 (lower is better)
Translates to: WPVGLGVGIIDHCLKEILGGCVG*GGCAIT
Trigger: AGTGATAGCACAGCCTCCGCAGCCAACGCAACCTCC...TAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCCTGCCTGTCTCCAATaGAATTCTGTGGCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDPACLQ*NSVAAL
Trigger: TAGGGCAGCCACAGAATTGCATTGGAGACAGGCAGG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCTGGGAGGCGGAGGTTaGAGTGAGCCGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLLGGGG*SEPRSC
Trigger: GCAAGATCTCGGCTCACTGCAACCTCCGCCTCCCAG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLDIRLL*RLRWLR
Trigger: CCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATGTCAGTACCTACAGTaGGGGCCAGAACCTGTATTA +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGCQYLQ*GPEPVL
Trigger: TAATACAGGTTCTGGCCCCCACTGTAGGTACTGACA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCTCGATGTCGAGGTaGAAGGCTTTTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVGSMSR*KAFPLL
Trigger: AAGGAGGGGAAAAGCCTTCCACCTCGACATCGAGCC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTTCATAGGTGTTAACTaGAGGGGGTTTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMFIGVN*RGFARE
Trigger: TTCCCTGGCAAACCCCCTTCAGTTAACACCTATGAA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGAAGAAAGCTTTATGCTaGGGAGACATTCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMKKALC*GDIRLL
Trigger: CAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTT...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAAAGAAAATAGGCACCTaGTACCTGACACTGGGAATG +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGKKIGT*YLTLGM
Trigger: CATTCCCAGTGTCAGGTATCAGGTGCCTATTTTCTT...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGGCGGCGGCTGTGGCTaGCCAACGCTAAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGGGGCG*PTLKLC
Trigger: GCAGAGTTTTAGCGTTGGGCAGCCACAGCCGCCGCC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACTAGTATCGTCGACTTaGCCGACTAAAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKELVSST*PTKGWV
Trigger: GACCCAGCCTTTAGTCGGGCAAGTCGACGATACTAG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp CCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAACAGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: PVGLGVGIIDHCLKEILTEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...TGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGGGAACTACATGTGGTaGGAGGCTGAGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLGNYMW*EAEMGL
Trigger: CAGCCCCATCTCAGCCTCCCACCACATGTAGTTCCC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGGCTCTCCGCTCCCGTaGTCCAGCTTGATCACGCGA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVGSPLP*SSLITR
Trigger: TCGCGTGATCAAGCTGGACCACGGGAGCGGAGAGCC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAATCCCGCTCCGCAGTCTaGTCAAAAGTACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKESRSAV*SKVLLC
Trigger: ACACAGCAGTACTTTTGACCAGACTGCGGAGCGGGA...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp CCTGATGACACTCTTGTGGACAACATTCAGTCCTTAGAAGCTAGAATAACCCTCAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PDDTLVDNIQSLEARITLKCYQD*PVGLGV
Trigger: AACTCCCAACCCAACAGGCCAATCCTGGTAGCACTT...GAGGGTTATTCTAGCTTCTAAGGACTGAATGTTGTCCACAAGAGTGTCATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGAAAATACTAGGTCAGTaGGGAAGTCACTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMKILGQ*GSHCLP
Trigger: AGGCAGGCAGTGACTTCCCCACTGACCTAGTATTTT...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACCTCCCATCTGCCACTaGAATTGTGCACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEPPICH*NCAHPA
Trigger: TGCTGGATGTGCACAATTCCAGTGGCAGATGGGAGG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACATGTGGTGGGAGGCTaGGATGGGGCTGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVHVVGG*DGAAVT
Trigger: AGTGACTGCAGCCCCATCTCAGCCTCCCACCACATG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACAGGACGCTGCTGTCTaGATCCCTCTCATAGTATTC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEQDAAV*IPLIVF
Trigger: GAATACTATGAGAGGGATTCAGACAGCAGCGTCCTG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGAGAGAAAGTGGTGGTTaGGGTAGGGGTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMRESGG*GRGSDF
Trigger: AAAATCAGAACCCCTACCTCAACCACCACTTTCTCT...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATAAGAAAGCTTTATGCTaGGGAGACATTCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDKKALC*GDIRLL
Trigger: CAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR TCA 90 bp CCTGATGACACTCTTGTGGACAACATTCAGTCCTTAGAAGCTAGAATAACCCTCAAGAAAGCTTTATGCTaGGGAGACATTCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PDDTLVDNIQSLEARITLKKALC*GDIRLL
Trigger: CAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTT...GAGGGTTATTCTAGCTTCTAAGGACTGAATGTTGTCCACAAGAGTGTCATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR TCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAATGGTGTGGCAAGCTGTaGGATCACATCGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEWCGKL*DHIGTN
Trigger: GTTTGTTCCGATGTGATCTCACAGCTTGCCACACCA...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGTGGCTGCGGAGGCTGTaGTATCACTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLWLRRL*YHCLLL
Trigger: CAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCA...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAAAGATGGGGCTGAAATaGCCGCGCCAGGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVKMGLK*PRQGCW
Trigger: CCAGCATCCCTGGCGCGGCCATTTCAGCCCCATCTT...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATAGCAGCTCTTCTTCTTaGCCGGCATCTTGGACATGG +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYSSSSS*PASWTW
Trigger: CCATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGCTGCTCCTGCTGACTaGCGTATGGCTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVAAPAD*RMAAQL
Trigger: CAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEKCYQD*PVGLGV
Trigger: AACTCCCAACCCAACAGGCCAATCCTGGTAGCACTT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR CCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGDIRLL*RLRWLR
Trigger: CCGCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
3UTR CAA 72 bp GGCTGCCCTAGGAGCCTTGTTTATACTTTTAAGCCATaGAGTTCTCTTTTCTTGTGCTTGGAACACCCTTCC +
Preference number: 4 (lower is better)
Translates to: GCPRSLVYTFKP*SSLFLCLEHPS
Trigger: GGAAGGGTGTTCCAAGCACAAGAAAAGAGAACTCAATGGCTTAAAAGTATAAACAAGGCTCCTAGGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTATCACAATAACTGGTaGCTACCTGTACAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMYHNNW*LPVQLH
Trigger: GTGCAACTGTACAGGTAGTCACCAGTTATTGTGATA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTTCTCTTCGGAAGAGCTaGGCTCGCAGACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGSLRKS*ARRPPQ
Trigger: CTGAGGAGGTCTGCGAGCGCAGCTCTTCCGAAGAGA...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGTTTGCCAGGGAATCTaGAACAGGCGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLVCQGI*NRRLHN
Trigger: GTTGTGAAGCCGCCTGTTGCAGATTCCCTGGCAAAC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACTTGCTGTTGAGAAGTaGTACCAGGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKELAVEK*YQDWPV
Trigger: AACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGGACATCAACAGCGCTaGATGACATCTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIGHQQR*MTSQRE
Trigger: CTCTCTCTGAGATGTCATGCAGCGCTGTTGATGTCC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTATGTGGGACCTTaGTCTATGGGCATTACACTG +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVAYVGP*SMGITL
Trigger: CAGTGTAATGCCCATAGAGCAAGGTCCCACATAAGC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAACCTACCTCCCATCTaGCACTGGAATTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKENLPPI*HWNCAH
Trigger: ATGTGCACAATTCCAGTGGCAGATGGGAGGTAGGTT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGAAAATTCCCCAAACTaGCTAGTCTATCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMENSPN*LVYQFP
Trigger: GGGAAACTGATAGACTAGGCAGTTTGGGGAATTTTC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACTGTGGAGGTTGCGTTaGCTGCGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCGCAGCCAACGCAACCTCCACAG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCTTTTACACTTACACTaGACTGAGCTCATTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLLHLH*TELIGA
Trigger: TGCTCCAATGAGCTCAGTCCAGTGTAAGTGTAAAAG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp CTGAAAAGGCCAAACACACAACCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LKRPNTQPKHGY*LSYKVERTPVA
Trigger: TGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCCTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATTCATAGGTGTTAACTaGAGGGGGTTTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPFIGVN*RGFARE
Trigger: TTCCCTGGCAAACCCCCTTCAGTTAACACCTATGAA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR TCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATATCACTGCTTGCTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYITACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGAT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp TGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAATCACTGCTTGCTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: WPVGLGVGIIDHCLKEILITACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGAT...TAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp TGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAAAGAAAGCTTTATGCTaGGGAGACATTCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WPVGLGVGIIDHCLKEILKKALC*GDIRLL
Trigger: CAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTT...TAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAATGGACCATGAGTTaGGTATCTTCTCCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVQWTMS*VSSPVV
Trigger: AACGACAGGAGAAGATACTCAACTCATGGTCCATTG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCACTGGACAAAGGGATaGTTCCTGTCCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGHWTKG*FLSQAG
Trigger: TCCTGCCTGGGACAGGAATCATCCCTTTGTCCAGTG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATGTGTGTGTGTGATGTaGTTTAACATCACTAGTATC +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGCVCVM*FNITSI
Trigger: GATACTAGTGATGTTAAATCACATCACACACACACA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATGGCTGCGGAGGCTGTaGTATCACTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVWLRRL*YHCLLL
Trigger: CAACAGCAAGCAGTGATAGCACAGCCTCCGCAGCCA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp GTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAACAGTGGGACATCAACAGCGCTaGATGACATCTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGLGVGIIDHCLKEILTVGHQQR*MTSQRE
Trigger: CTCTCTCTGAGATGTCATGCAGCGCTGTTGATGTCC...CACTGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTTCTCTTTTCTTGTaGTTGGAACACCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVSSLFL*LEHPSL
Trigger: GAGGGAAGGGTGTTCCAAGCACAAGAAAAGAGAACT...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAAATGGACTGCGCCAGTaGAAAATACCAGCGTCTTAC +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPNGLRQ*KIPASY
Trigger: GTAAGACGCTGGTATTTTGCACTGGCGCAGTCCATT...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCAGGGCCATAATCCGTaGCCCGAGAGACGTCGAAAA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGQGHNP*PERRRK
Trigger: TTTTCGACGTCTCTCGGGCCACGGATTATGGCCCTG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYRRGYI*HSNRSG
Trigger: ACCACTTCTGTTACTATGCCAAATGTACCCGCGCCT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAAGTGCTACCAGGATTaGCCTGTTGGGTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLKCYQD*PVGLGV
Trigger: AACTCCCAACCCAACAGGCCAATCCTGGTAGCACTT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCTCAGGGTAAATCCATaGGTAATAGGAAACATGGGA +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDLRVNP*VIGNMG
Trigger: TCCCATGTTTCCTATTACCCATGGATTTACCCTGAG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAAAAGCAGAGGAATCGTaGCAATTTCTCTTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ISQLPVSATLTYLPSATGKAEES*QFLLES
Trigger: ACTTTCTAAGAGAAATTGCCACGATTCCTCTGCTTT...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAGTGGGAGAAAAGGTCTaGTTTTGGATAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIVGEKV*FWIGRR
Trigger: TCTCCTGCCTATCCAAAACCAGACCTTTTCTCCCAC...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp GGTGGTGGGCAAGCAAGAATGTCTGTGAACTTTAACTaGCTTCAGAGTGCCTCACTTAGCATTTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: GGGQARMSVNFN*LQSASLSIFIY
Trigger: ATAGATGAAAATGCTAAGTGAGGCACTCTGAAGCAAGTTAAAGTTCACAGACATTCTTGCTTGCCCACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp CAGATAAGGGGGTCTACTGTACAAGCAAAGGTGCAATaGACATCATTGTACAGGCTATCTTGTGAACACATG +
Preference number: 4 (lower is better)
Translates to: QIRGSTVQAKVQ*TSLYRLSCEHM
Trigger: CATGTGTTCACAAGATAGCCTGTACAATGATGTCAATTGCACCTTTGCTTGTACAGTAGACCCCCTTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAATTGAACAATGGACCATaGGTTGAGTATCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKELNNGP*VEYLLL
Trigger: CAGGAGAAGATACTCAACTCATGGTCCATTGTTCAA...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGAATCCTTGCAACCTATaGAGGAAAGCCATACATTTA +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMNPCNL*RKAIHL
Trigger: TAAATGTATGGCTTTCCTTCATAGGTTGCAAGGATT...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATTTTTTATGGAGAAGTTaGACTGTGGCATTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDFLWRS*TVAFAL
Trigger: CAAGGCAAATGCCACAGTTCAACTTCTCCATAAAAA...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATACCCTTTCCAGCTTTTaGTTTGTATGCACGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDTLSSF*FVCTLN
Trigger: ATTTAGCGTGCATACAAATCAAAAGCTGGAAAGGGT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTAAGGGCAGCCCAACATaGTGGATTATGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGKGSPT*WIMLLL
Trigger: GAGCAGCAGCATAATCCAGCATGTTGGGCTGCCCTT...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTAACACCTCCCCCAGATaGACTATCCCAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGNTSPR*TIPEAL
Trigger: AAGAGCCTCTGGGATAGTGCATCTGGGGGAGGTGTT...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GTCAATGGCTACAACACCTCCCCCAGATGCACAATTTATGACCTGATGACACTCTTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: VNGYNTSPRCTIYDLMTLFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...GAGTGTCATCAGGTCATAAATTGTGCATCTGGGGGAGGTGTTGTAGCCATTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR GCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCTTGCTGTTGAGAAGTaGTACCAGGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLLAVEK*YQDWPV
Trigger: AACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAACAGTGCTTGCTGTTGAGAAGTaGTACCAGGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VGLGVGIIDHCLKEILTVLAVEK*YQDWPV
Trigger: AACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG...CACTGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR GCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATATGCAATTCTGTGGCTaGCCTAGGAGCCTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYMQFCG*PRSLVY
Trigger: ATAAACAAGGCTCCTAGGGCAGCCACAGAATTGCAT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGGGGAAGTCACTGCCTaGCTGTCTCCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGGEVTA*LSPMQF
Trigger: GAATTGCATTGGAGACAGGCAGGCAGTGACTTCCCC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATTGTAGCAGCTCTACTTaGAATCTTACTACACATCCT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDCSSST*NLTTHP
Trigger: AGGATGTGTAGTAAGATTCCAAGTAGAGCTGCTACA...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAACAGAAAAGCTTATGTaGGACCTTGCTCTATGGGCA +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPTEKLM*DLALWA
Trigger: TGCCCATAGAGCAAGGTCCCACATAAGCTTTTCTGT...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAAACCTATTCTGCCTTaGGCTGTCAGTACCTACAGT +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIKPILP*AVSTYS
Trigger: ACTGTAGGTACTGACAGCCCAAGGCAGAATAGGTTT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAGAAAAGGTCTGGTTTTaGATAGGCAGGAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEEKVWF*IGRRLR
Trigger: TCTAAGTCTCCTGCCTATCCAAAACCAGACCTTTTC...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCTGTCCCAGGCAGGATaGAGAGGGATAGTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGLSQAG*RGIVRD
Trigger: ATCTCTCACTATCCCTCTCCATCCTGCCTGGGACAG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGGTAGCTCCCCCATCATaGAGGATATTTTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLVAPPS*RIFSKT
Trigger: GGTCTTGGAAAATATCCTCCATGATGGGGGAGCTAC...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp TATTATTTCCATCTCAAGTGTGGGGAAAATGTTCCCTaGCTGTCTCTGATCTTCCTCAGGTATGATATGACC +
Preference number: 4 (lower is better)
Translates to: YYFHLKCGENVP*LSLIFLRYDMT
Trigger: GGTCATATCATACCTGAGGAAGATCAGAGACAGCAAGGGAACATTTTCCCCACACTTGAGATGGAAATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGAGAGAAAGTGGTGGTTaGGGTAGGGGTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLRESGG*GRGSDF
Trigger: AAAATCAGAACCCCTACCTCAACCACCACTTTCTCT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp CCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAACAAGAGAAAGTGGTGGTTaGGGTAGGGGTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: PVGLGVGIIDHCLKEILTRESGG*GRGSDF
Trigger: AAAATCAGAACCCCTACCTCAACCACCACTTTCTCT...TGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGCTTATTTTCAGCAATaGGAGAAAGTGGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPAYFQQ*EKVVVE
Trigger: CTCAACCACCACTTTCTCTCATTGCTGAAAATAAGC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR TCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCTACAGGCACCTTTCTaGATTCAAGTAAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDLQAPF*IQVKVL
Trigger: CAAAACTTTTACTTGAATTCAGAAAGGTGCCTGTAG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAGAAGCCTGCAGGACTaGCCTATGTCAAAGAATAAA +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIRSLQD*PMSKNK
Trigger: TTTATTCTTTGACATAGGTCAGTCCTGCAGGCTTCT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATACATTGCATGCCTGTaGAATGACAGCAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPYIACL*NDSKNC
Trigger: ACAGTTCTTGCTGTCATTTCACAGGCATGCAATGTA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGTGGTTGACCTTGGATaGCTGAAACCTCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLVVDLG*LKPQKV
Trigger: CACTTTTTGAGGTTTCAGTCATCCAAGGTCAACCAC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATGCCTGAAACCATaGATAATACCAAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVECLKP*IIPNPL
Trigger: TAGAGGGTTTGGTATTATTCATGGTTTCAGGCATTC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATGACTACCTGTACAGTTaGACTATGTTCTTCATACTT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDDYLYS*TMFFIL
Trigger: AAGTATGAAGAACATAGTGCAACTGTACAGGTAGTC...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTGGCTACAGATGCAGTaGATGTTAATTTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYWLQMQ*MLISTG
Trigger: GCCTGTAGAAATTAACATGCACTGCATCTGTAGCCA...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATATTCCTGTAAGACTGTaGCTCCAAATTGGGATCTCA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYIPVRL*LQIGIS
Trigger: TGAGATCCCAATTTGGAGGCACAGTCTTACAGGAAT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYCFRIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCA...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATAAAGCAGAGGAATCGTaGCAATTTCTCTTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDKAEES*QFLLES
Trigger: ACTTTCTAAGAGAAATTGCCACGATTCCTCTGCTTT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCTCCTGTCGTTACACTaGAAAGCTTATTATTTAAGG +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDLLSLH*KAYYLR
Trigger: CCTTAAATAATAAGCTTTCCAGTGTAACGACAGGAG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCTGGAGTTTGCAACTTaGAGAAATATAATCATTCAC +
Preference number: 4 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLEFAT*RNIIIH
Trigger: GTGAATGATTATATTTCTCCAAGTTGCAAACTCCAG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGCTTATTTTCAGCAATaGGAGAAAGTGGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLAYFQQ*EKVVVE
Trigger: CTCAACCACCACTTTCTCTCATTGCTGAAAATAAGC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTTTCATAGGTGTTAACTaGAGGGGGTTTGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGFIGVN*RGFARE
Trigger: TTCCCTGGCAAACCCCCTTCAGTTAACACCTATGAA...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGGGAGTTGGGATAATTaGTCATTGCTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPGSWDN*SLLERD
Trigger: ATCTCTTTCAAGCAATGATCAATTATCCCAACTCCC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTATCAACAGCGCTGCATaGCATCTCAGAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGINSAA*HLRERK
Trigger: TTTCCTCTCTCTGAGATGTCATGCAGCGCTGTTGAT...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATGCTGGATAAAAACATaGGGTACGAAAGTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPCWIKT*GTKVVQ
Trigger: TTGAACCACTTTCGTACCTCATGTTTTTATCCAGCA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATTGCTGGATAAAAACATaGGGTACGAAAGTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYCWIKT*GTKVVQ
Trigger: TTGAACCACTTTCGTACCTCATGTTTTTATCCAGCA...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGCTGTAGAAATTCTGTaGACTGGTACAGAAATACAG +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPAVEIL*TGTEIQ
Trigger: CTGTATTTCTGTACCAGTTCACAGAATTTCTACAGC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAGATCTTCCTCAGGTATaGTATGACCTATCTATAGAT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEDLPQV*YDLSID
Trigger: ATCTATAGATAGGTCATATCATACCTGAGGAAGATC...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTATCAGTCACCTaGGTTATTCTTAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVLVSVT*VILNLV
Trigger: AACCAAGTTAAGAATAACTCAGGTGACTGATACCAA...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTACAGGCTATCTTGTaGACACATGTATGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVVQAIL*THVCFF
Trigger: AAAGAAACATACATGTGTTCACAAGATAGCCTGTAC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTAGGCTGTGCTATCACTaGTTGCTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATTCCATTACACAGCTTTaGTTCTTTGGTTACAAAGTA +
Preference number: 4 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDSITQL*FFGYKV
Trigger: TACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGA...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTGAATAGATaGCAAAATACTAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVCFLNR*QNTRSV
Trigger: CACTGACCTAGTATTTTGGCATCTATTCAGAAAGCA...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAACCAGCGTCTTACTTTaGCATCACCAATCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPTSVLL*HHQSEN
Trigger: ATTTTCAGATTGGTGATGGCAAAGTAAGACGCTGGT...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCTCAGGGTAAATCCATaGGTAATAGGAAACATGGGA +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLLRVNP*VIGNMG
Trigger: TCCCATGTTTCCTATTACCCATGGATTTACCCTGAG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACATGAGGTACGAAAGTaGTTCAAAGATTATAGGTCA +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEHEVRK*FKDYRS
Trigger: TGACCTATAATCTTTGAACCACTTTCGTACCTCATG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACGGAGAACTAACTACTaGTTCTCATTAACTCTGATT +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKERRTNY*FSLTLI
Trigger: AATCAGAGTTAATGAGAACCAGTAGTTAGTTCTCCG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAGGTCCATGAATTACTaGAGTTTGCAACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIRSMNY*SLQLGE
Trigger: TTCTCCAAGTTGCAAACTCCAGTAATTCATGGACCT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTTGTGGAGAGGAAAATaGTACAGAAAGACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLLWRGK*YRKTQD
Trigger: GTCTTGGGTCTTTCTGTACCATTTTCCTCTCCACAA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGGAAAGGCTTTaGAATCAACATCCTAATCCT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVFRERL*NQHPNP
Trigger: AGGATTAGGATGTTGATTCCAAAGCCTTTCCCTAAA...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATTCAACAACTAAATaGACTGCGCCAGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: STLYSICVCVCVCVCVCVNSTTK*TAPVQN
Trigger: ATTTTGCACTGGCGCAGTCCATTTAGTTGTTGAATT...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp CAGCTCTACTTGGAATCTTACTACACATCCTTAGGGTaGCTTACTCAAGCCTATGTACTTAGTTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: QLYLESYYTSLG*LTQAYVLSSLI
Trigger: AATCAAGGAACTAAGTACATAGGCTTGAGTAAGCAACCCTAAGGATGTGTAGTAAGATTCCAAGTAGAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp CCATCTGCCACTGGAATTGTGCACATCCAGCATAATTaGAGCATAGTATCCCATTGCTTAAAACCATTCAAT +
Preference number: 4 (lower is better)
Translates to: PSATGIVHIQHN*SIVSHCLKPFN
Trigger: ATTGAATGGTTTTAAGCAATGGGATACTATGCTCAAATTATGCTGGATGTGCACAATTCCAGTGGCAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp GGGTCTACTGTACAAGCAAAGGTGCAATTGACATCATaGTACAGGCTATCTTGTGAACACATGTATGTTTCT +
Preference number: 4 (lower is better)
Translates to: GSTVQAKVQLTS*YRLSCEHMYVS
Trigger: AGAAACATACATGTGTTCACAAGATAGCCTGTACAATGATGTCAATTGCACCTTTGCTTGTACAGTAGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATAGGTCACAGGGTATGTaGCTTTTAAAATTTAATGGG +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYRSQGM*LLKFNG
Trigger: CCCATTAAATTTTAAAAGTCACATACCCTGTGACCT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTTTCCAAGACCCTCACTaGATGCCTGAAACCATGAAT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGFQDPH*MPETMN
Trigger: ATTCATGGTTTCAGGCATTCAGTGAGGGTCTTGGAA...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAATCCATTACACAGCTTTaGTTCTTTGGTTACAAAGTA +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKESITQL*FFGYKV
Trigger: TACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGA...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACATTTAAAGGGATCTTaGTGTAGAAATTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEHLKGS*CRNSVN
Trigger: GTTCACAGAATTTCTACAGCAAGATCCCTTTAAATG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAAGTTCTTTGCTTATGTaGATTTTCAAATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLISSLLM*IFKWTG
Trigger: CCCTGTCCATTTGAAAATGCACATAAGCAAAGAACT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAACAGCTTTGCTTCTTTaGTTACAAAGTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPTALLL*LQSRLN
Trigger: GTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGT...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCACATGAGGTACGAAAGTaGTTCAAAGATTATAGGTCA +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPHEVRK*FKDYRS
Trigger: TGACCTATAATCTTTGAACCACTTTCGTACCTCATG...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATACAGAATTAGATAGATaGCATTCCTGTAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYTELDR*HSCKTV
Trigger: CACAGTCTTACAGGAATGCCATCTATCTAATTCTGT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGTGATCCCCAGTCACTaGAGGCTTGATTATAAAACG +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGVIPSH*RLDYKT
Trigger: CGTTTTATAATCAAGCCTCCAGTGACTGGGGATCAC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAGAAATTCTGTGAACTaGTACAGAAATACAGGACAA +
Preference number: 4 (lower is better)
Translates to: GQTHNQSMATCFRIKWKERNSVN*YRNTGQ
Trigger: TTGTCCTGTATTTCTGTACCAGTTCACAGAATTTCT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATGGAGAAGTTGAACTGTaGCATTTGCCTTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYGEVEL*HLPCFK
Trigger: TTTAAAACAAGGCAAATGCCACAGTTCAACTTCTCC...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp ATGACAGCAAGAACTGTGATCCGGATAACATTTGGATaGCAGCAGGCAAGAGTATTTTACAGTTGTTATATG +
Preference number: 4 (lower is better)
Translates to: MTARTVIRITFG*QQARVFYSCYM
Trigger: CATATAACAACTGTAAAATACTCTTGCCTGCTGCAATCCAAATGTTATCCGGATCACAGTTCTTGCTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACAAAGTGCTTGCCACTaGGCCATAAAGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVQSACH*AIKLLL
Trigger: TAAAAGAAGCTTTATGGCTCAGTGGCAAGCACTTTG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGACCATCCAGGTATGCTaGACAAATTCAACAACTAAA +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLTIQVC*TNSTTK
Trigger: TTTAGTTGTTGAATTTGTTCAGCATACCTGGATGGT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATACATCCCAATTTTATaGCTTGTTTGTTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPYIPIL*LVCLWL
Trigger: TAGCCACAAACAAACAAGGCATAAAATTGGGATGTA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATCTTGTGTTTTAATGTaGACTTCCCTTATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPSCVLM*TSLILL
Trigger: CAGCAAAATAAGGGAAGTGCACATTAAAACACAAGA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATGCTTTCGTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVCFRIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATCACTGCATTATCAGTTaGCTTATTATGTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYHCIIS*LIMSSN
Trigger: ATTTGAGGACATAATAAGCCAACTGATAATGCAGTG...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATTTCCATCTCAAGTGTaGGGAAAATGTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVFPSQV*GKCSLA
Trigger: AGCAAGGGAACATTTTCCCCACACTTGAGATGGAAA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR TCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTGGGAGTTGGGATAATTaGTCATTGCTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGGSWDN*SLLERD
Trigger: ATCTCTTTCAAGCAATGATCAATTATCCCAACTCCC...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR TCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGTGTGTGTGTGTGTGTaGTGTGATTTAACATCACTA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVVCVCV*CDLTSL
Trigger: TAGTGATGTTAAATCACATCACACACACACACACAC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGACAAGTATTCCTCACTaGATTATCAGTTGGCTTATT +
Preference number: 4 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLTSIPH*IISWLI
Trigger: AATAAGCCAACTGATAATGCAGTGAGGAATACTTGT...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACTGTGCCAATTTGTATaGTCACTAGCAATGTATTCC +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVLCQFV*SLAMYS
Trigger: GGAATACATTGCTAGTGAGCATACAAATTGGCACAG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CCA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTCTCCAAAGCTGAATTaGAAGTTACTTAAGATCCTA +
Preference number: 4 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLSPKLN*KLLKIL
Trigger: TAGGATCTTAAGTAACTTCCAATTCAGCTTTGGAGA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACAAAGCATGGCTACTTaGTTTCGTATAAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVQSMAT*FRIKWK
Trigger: TTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCAAAGCATGGCTACTTaGTTTCGTATAAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGQSMAT*FRIKWK
Trigger: TTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGACTACCTGTACAGTTaGACTATGTTCTTCATACTT +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVDYLYS*TMFFIL
Trigger: AAGTATGAAGAACATAGTGCAACTGTACAGGTAGTC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAACTGTGCCTCCAAATTaGGATCTCAATCAGTTAATA +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVTVPPN*DLNQLI
Trigger: TATTAACTGATTGAGATCCCAATTTGGAGGCACAGT...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp AAATTGGGATCTCAATCAGTTAATATTTACAACTATTaGGAGCAGGAGACTAAATCTCCAAAGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: KLGSQSVNIYNY*EQETKSPKLNW
Trigger: CCAATTCAGCTTTGGAGATTTAGTCTCCTGCTCCAAATAGTTGTAAATATTAACTGATTGAGATCCCAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
3UTR CAA 72 bp AGCATTTTCATCTATGAACACAGCATGTCATACCAATaGTACTCCACAAAAGATATAGTTACAGTAGCACTT +
Preference number: 4 (lower is better)
Translates to: SIFIYEHSMSYQ*YSTKDIVTVAL
Trigger: AAGTGCTACTGTAACTATATCTTTTGTGGAGTACAATTGGTATGACATGCTGTGTTCATAGATGAAAATGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR GCA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KMQTLLALINPIYYSPCVFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS CCA 90 bp CCGAGGAAGCATTCTGGCCGGTGCCCACGGGAAGGGTGGCCGCCGTaGCGGGGCTCGCTGCGGCGCCGGTGGACGAGGGCTGCGCGGGGC +
Preference number: 5 (lower is better)
Translates to: PRKHSGRCPREGWPP*RGSLRRRWTRAARG
Trigger: GCCCCGCGCAGCCCTCGTCCACCGGCGCCGCAGCGAGCCCCGCCACGGCGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GGCCCGGTCGCGGCTCCCGGGAACGGCGGCAGCGGAGCCGAGCTTTaGGCCACAGCCCCACCTACGGGTGGCGGCGGCGGCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GPVAAPGNGGSGAEL*ATAPPTGGGGGCGC
Trigger: GCAGCCACAGCCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTGCCGCCGTTCCCGGGAGCCGCGACCGGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GCGCGCCCACCGAGGAAGCATTCTGGCCGGTGCCCACGGGAAGGGTaGCCGCCGTGGCGGGGCTCGCTGCGGCGCCGGTGGACGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ARPPRKHSGRCPREG*PPWRGSLRRRWTRA
Trigger: AGCCCTCGTCCACCGGCGCCGCAGCGAGCCCCGCCACGGCGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGGTGGGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GGCGGGGCTCGCTGCGGCGCCGGTGGACGAGGGCTGCGCGGGGCTTaGCGGCTGCAGGCCGGCCACGTGCTGCTGCAGGTACTCACTCTG +
Preference number: 5 (lower is better)
Translates to: GGARCGAGGRGLRGA*RLQAGHVLLQVLTL
Trigger: CAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTCGTCCACCGGCGCCGCAGCGAGCCCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GCGGCGGCAGACCGCTGGCACGGGACCGGAGGCGCCCCGGCTGTGTaGGGTAGCGGTGGTGGCTTCTCCGGCTCCTCCTCGGTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: AAADRWHGTGGAPAV*GSGGGFSGSSSVRP
Trigger: TGGGCGCACCGAGGAGGAGCCGGAGAAGCCACCACCGCTACCTCACACAGCCGGGGCGCCTCCGGTCCCGTGCCAGCGGTCTGCCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp CTCGCTGCGGCGCCGGTGGACGAGGGCTGCGCGGGGCTTGGCGGCTaGAGGCCGGCCACGTGCTGCTGCAGGTACTCACTCTGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LAAAPVDEGCAGLGG*RPATCCCRYSLWPE
Trigger: CTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTCGTCCACCGGCGCCGCAGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp AGCGGACCACTGCCACCCATCTGCGGCGGAGGCACGGACTGGGGCTaGCCAGCCCCGGCAGGACCGAGGCACGGCTGCACCACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SGPLPPICGGGTDWG*PAPAGPRHGCTTPP
Trigger: GGGAGGCGTGGTGCAGCCGTGCCTCGGTCCTGCCGGGGCTGGGCAGCCCCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGGTCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GGCTGCACCACGCCTCCCACAGTAGCCGGGGGCACTCCAGTCGGCTaGCAAGGCGCGACCTGCCCGCCTTGCGCTGGTCCCGTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GCTTPPTVAGGTPVG*QGATCPPCAGPVRG
Trigger: CCCCCGGACGGGACCAGCGCAAGGCGGGCAGGTCGCGCCTTGTCAGCCGACTGGAGTGCCCCCGGCTACTGTGGGAGGCGTGGTGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GTGGACGAGGGCTGCGCGGGGCTTGGCGGCTGCAGGCCGGCCACGTaGTGCTGCAGGTACTCACTCTGGCCGGAGGGCTGGACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: VDEGCAGLGGCRPAT*CCRYSLWPEGWTGS
Trigger: GCTGCCCGTCCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTCGTCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp CCCAGGGGCGGGCCGGCTGCTTCCTCTCTCGTCTCCGGGCAGCCGTaGTCAGTCCAGCTCGGCGCTCGGCGCGGTCAGCAGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PRGGPAASSLVSGQP*SVQLGARRGQQALA
Trigger: AGCCAAGGCCTGCTGACCGCGCCGAGCGCCGAGCTGGACTGACCACGGCTGCCCGGAGACGAGAGAGGAAGCAGCCGGCCCGCCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GCGCCCACTGCAGGGCCCGGCTGCGGAGGCAGGGACATAGCCGGCTaGGCCAGGGTTACATTCGTCGGCGGCAGAGTCTGTCCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: APTAGPGCGGRDIAG*ARVTFVGGRVCPPG
Trigger: GCCCGGGGGACAGACTCTGCCGCCGACGAATGTAACCCTGGCGCAGCCGGCTATGTCCCTGCCTCCGCAGCCGGGCCCTGCAGTGGGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GCACCACGGCGTGAGGGCCACCAGGTACGGCTGACAGCGGACCACTaGCACCCATCTGCGGCGGAGGCACGGACTGGGGCTGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: APRREGHQVRLTADH*HPSAAEARTGAAQP
Trigger: GGGCTGGGCAGCCCCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGGTCCGCTGTCAGCCGTACCTGGTGGCCCTCACGCCGTGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp TGGGAAGACGCGCCCATGAGCTGCGCGCCCACCGAGGAAGCATTCTaGCCGGTGCCCACGGGAAGGGTGGCCGCCGTGGCGGGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: WEDAPMSCAPTEEAF*PVPTGRVAAVAGLA
Trigger: AGCGAGCCCCGCCACGGCGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGGTGGGCGCGCAGCTCATGGGCGCGTCTTCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GACGAGGGCTGCGCGGGGCTTGGCGGCTGCAGGCCGGCCACGTGCTaGTGCAGGTACTCACTCTGGCCGGAGGGCTGGACGGGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: DEGCAGLGGCRPATC*CRYSLWPEGWTGSK
Trigger: TTTGCTGCCCGTCCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp ATTCCCTCAGAGGCGGCGAGAGCGCGAACCCAGGGGCGGGCCGGCTaGTTCCTCTCTCGTCTCCGGGCAGCCGTGGTCAGTCCAGCTCGG +
Preference number: 5 (lower is better)
Translates to: IPSEAARARTQGRAG*FLSRLRAAVVSPAR
Trigger: CCGAGCTGGACTGACCACGGCTGCCCGGAGACGAGAGAGGAAGCAGCCGGCCCGCCCCTGGGTTCGCGCTCTCGCCGCCTCTGAGGGAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GAGGGCTGCGCGGGGCTTGGCGGCTGCAGGCCGGCCACGTGCTGCTaGAGGTACTCACTCTGGCCGGAGGGCTGGACGGGCAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: EGCAGLGGCRPATCC*RYSLWPEGWTGSKC
Trigger: ACATTTGCTGCCCGTCCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp CGAGCGCCCCAGACACGCTCCGGGCCGAAACGACTCCTCCTCCGTTaGCGGGAGCAGCAGCCGCCGCTGCCAGCTGCCCATCTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RAPQTRSGPKRLLLR*REQQPPLPAAHLGG
Trigger: TCCTCCTAGATGGGCAGCTGGCAGCGGCGGCTGCTGCTCCCGCCAACGGAGGAGGAGTCGTTTCGGCCCGGAGCGTGTCTGGGGCGCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp CGGCGGCAGCGGAGCCGAGCTTTGAGCCACAGCCCCACCTACGGGTaGCGGCGGCGGCTGTGGCTGCCCAACGCTAAAACTCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RRQRSRALSHSPTYG*RRRLWLPNAKTLRL
Trigger: CAGCCGCAGAGTTTTAGCGTTGGGCAGCCACAGCCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GCGGGCACGGCTGCAGGCACGTTTGGAACTCCGGGCACCACGGCGTaGGGGCCACCAGGTACGGCTGACAGCGGACCACTGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: AGTAAGTFGTPGTTA*GPPGTADSGPLPPI
Trigger: GATGGGTGGCAGTGGTCCGCTGTCAGCCGTACCTGGTGGCCCTCACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp GCAGTCAAGGAGCTGTCAGTTCCCGACTCGGGCCCGTGCGCCCCCTaGATGGAGGCCACTACTACCACCACCGACCCTCCGGTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: AVKELSVPDSGPCAP*MEATTTTTDPPVAP
Trigger: GGGCGCCACCGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAGTCGGGAACTGACAGCTCCTTGACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp TCAAGGAGCTGTCAGTTCCCGACTCGGGCCCGTGCGCCCCCTGCATaGAGGCCACTACTACCACCACCGACCCTCCGGTGGCGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SRSCQFPTRARAPPA*RPLLPPPTLRWRPG
Trigger: GCCTGGGCGCCACCGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAGTCGGGAACTGACAGCTCCTTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp CGCTCGGGCTCCTCAGGCCGGTGCCGGCGTCAGCGCTGGGCTCTCTaGCTGAGGGAAGGAGCGGCGAGTCCGGAGTCGGAGATGCCTAAT +
Preference number: 5 (lower is better)
Translates to: RSGSSGRCRRQRWAL*LREGAASPESEMPN
Trigger: ATTAGGCATCTCCGACTCCGGACTCGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGCGCTGACGCCGGCACCGGCCTGAGGAGCCCGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GTTTGGAACTCCGGGCACCACGGCGTGAGGGCCACCAGGTACGGCTaGCAGCGGACCACTGCCACCCATCTGCGGCGGAGGCACGGACTG +
Preference number: 5 (lower is better)
Translates to: VWNSGHHGVRATRYG*QRTTATHLRRRHGL
Trigger: CAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGGTCCGCTGTCAGCCGTACCTGGTGGCCCTCACGCCGTGGTGCCCGGAGTTCCAAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GCGCCCCCTGCATGGAGGCCACTACTACCACCACCGACCCTCCGGTaGCGCCCAGGCCGCTGTCCCGCTCCGCAGTCTGGTCAAAAGTAC +
Preference number: 5 (lower is better)
Translates to: APPAWRPLLPPPTLR*RPGRCPAPQSGQKY
Trigger: GTACTTTTGACCAGACTGCGGAGCGGGACAGCGGCCTGGGCGCCACCGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp CGGGCTCCTCAGGCCGGTGCCGGCGTCAGCGCTGGGCTCTCTGACTaGGGGAAGGAGCGGCGAGTCCGGAGTCGGAGATGCCTAATTCAG +
Preference number: 5 (lower is better)
Translates to: RAPQAGAGVSAGLSD*GKERRVRSRRCLIQ
Trigger: CTGAATTAGGCATCTCCGACTCCGGACTCGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGCGCTGACGCCGGCACCGGCCTGAGGAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp TGTGACACAGCAGTCAAGGAGCTGTCAGTTCCCGACTCGGGCCCGTaGGCCCCCTGCATGGAGGCCACTACTACCACCACCGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: CDTAVKELSVPDSGP*APCMEATTTTTDPP
Trigger: CGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAGTCGGGAACTGACAGCTCCTTGACTGCTGTGTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GGAGGGCAGAGCACGGGCCCCCAAAGACAAAGTCCGAGTCTGCGCTaGGGTCTGAGGCCCGCCGCTGTTAAGAGTCACGGGCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: GGQSTGPQRQSPSLR*GLRPAAVKSHGLIQ
Trigger: CTGGATCAGCCCGTGACTCTTAACAGCGGCGGGCCTCAGACCCCAGCGCAGACTCGGACTTTGTCTTTGGGGGCCCGTGCTCTGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp AACAGAAGTGGTAGACACACTAGGCACGCTTGGAGCGGGCACGGCTaGAGGCACGTTTGGAACTCCGGGCACCACGGCGTGAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: NRSGRHTRHAWSGHG*RHVWNSGHHGVRAT
Trigger: GGTGGCCCTCACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCAAGCGTGCCTAGTGTGTCTACCACTTCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp TCCAGCTTGATCACGCGAAAACGGGAACTACATGTGGTGGGAGGCTaGGATGGGGCTGCAGTCACTGGCCCGGCGGATGAGCCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: SSLITRKRELHVVGG*DGAAVTGPADEPAS
Trigger: GCTCGCGGGCTCATCCGCCGGGCCAGTGACTGCAGCCCCATCTCAGCCTCCCACCACATGTAGTTCCCGTTTTCGCGTGATCAAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GGCCCGAGAGACGTCGAAAATCTCGGAGGAGACGTCCTCTGTGCGTaGCTCGTCCGGGTCGTCCAAGCTCTCGGTGTCCTCGGTGATGCT +
Preference number: 5 (lower is better)
Translates to: GPRDVENLGGDVLCA*LVRVVQALGVLGDA
Trigger: AGCATCACCGAGGACACCGAGAGCTTGGACGACCCGGACGAGTCACGCACAGAGGACGTCTCCTCCGAGATTTTCGACGTCTCTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp ACCGACCCTCCGGTGGCGCCCAGGCCGCTGTCCCGCTCCGCAGTCTaGTCAAAAGTACTGCTGTGTCTAATGCAATCCCCGGATCTAGTC +
Preference number: 5 (lower is better)
Translates to: TDPPVAPRPLSRSAV*SKVLLCLMQSPDLV
Trigger: GACTAGATCCGGGGATTGCATTAGACACAGCAGTACTTTTGACCAGACTGCGGAGCGGGACAGCGGCCTGGGCGCCACCGGAGGGTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GCAGCTCTTCTTCTTGGCCGGCATCTTGGACATGGTGAAGAAGGCTaGAGGGCAGAGAGGCACGCCGGCTCCTCTGGGTCCTGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: AALLLGRHLGHGEEG*RAERHAGSSGSCRK
Trigger: TTTCCGACAGGACCCAGAGGAGCCGGCGTGCCTCTCTGCCCTCCAGCCTTCTTCACCATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp CTTCGGAAGAGCTGCGCTCGCAGACCTCCTCAGGGCCATAATCCGTaGCCCGAGAGACGTCGAAAATCTCGGAGGAGACGTCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LRKSCARRPPQGHNP*PERRRKSRRRRPLC
Trigger: GCACAGAGGACGTCTCCTCCGAGATTTTCGACGTCTCTCGGGCCACGGATTATGGCCCTGAGGAGGTCTGCGAGCGCAGCTCTTCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp GTTGGTGCGCTGTGTGTGCCTGGCGCTAAGGGCAGCCCAACATGCTaGATTATGCTGCTGCTCCTGCTGACTGGCGTATGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VGALCVPGAKGSPTC*IMLLLLLTGVWLLS
Trigger: GCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAATCCAGCATGTTGGGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000480589.1
CDS TCA 90 bp TCCATCGGCCGCGTCTATAGGGCTCTCCGCTCCCGTGGTCCAGCTTaGTCACGCGAAAACGGGAACTACATGTGGTGGGAGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: SIGRVYRALRSRGPA*SRENGNYMWWEAEM
Trigger: CATCTCAGCCTCCCACCACATGTAGTTCCCGTTTTCGCGTGATCAAGCTGGACCACGGGAGCGGAGAGCCCTATAGACGCGGCCGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp ACATCCTCCTCCTCGTTTCCTTCTCTGTGTCGGTCTCTTCGGCTCTaGCCCCGTCTCAGTCCCGCGGCGGCTCCTCCTTCCTTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: TSSSSFPSLCRSLRL*PRLSPAAAPPSFLA
Trigger: AGCTAAAAAGGAAGGAGGAGCCGCCGCGGGACTGAGACGGGGGCAGAGCCGAAGAGACCGACACAGAGAAGGAAACGAGGAGGAGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp CTTGTTGGTGCGCTGTGTGTGCCTGGCGCTAAGGGCAGCCCAACATaGTGGATTATGCTGCTGCTCCTGCTGACTGGCGTATGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LVGALCVPGAKGSPT*WIMLLLLLTGVWLL
Trigger: GAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAATCCAGCATGTTGGGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000480589.1
CDS CCA 90 bp AGCCCAACATGCTGGATTATGCTGCTGCTCCTGCTGACTGGCGTATaGCTGCTCAGCTGTTGCGACTGGGCCAGAGGCGCGGGTACATTT +
Preference number: 5 (lower is better)
Translates to: SPTCWIMLLLLLTGV*LLSCCDWARGAGTF
Trigger: AAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAATCCAGCATGTTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp CTGCTGCTCCTGCTGACTGGCGTATGGCTGCTCAGCTGTTGCGACTaGGCCAGAGGCGCGGGTACATTTGGCATAGTAACAGAAGTGGTA +
Preference number: 5 (lower is better)
Translates to: LLLLLTGVWLLSCCD*ARGAGTFGIVTEVV
Trigger: TACCACTTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCGGCTGCTGTGGAGGTaGCGTTGGCTGCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVRLLWR*RWLRRL
Trigger: CAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCCG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS GCA 90 bp CGGCTGTGTGAGGTAGCGGTGGTGGCTTCTCCGGCTCCTCCTCGGTaGGCCCAATTCCTAAACCCCGAAGAAACTGAAATTCAAACTGCT +
Preference number: 5 (lower is better)
Translates to: RLCEVAVVASPAPPR*AQFLNPEETEIQTA
Trigger: AGCAGTTTGAATTTCAGTTTCTTCGGGGTTTAGGAATTGGGCGCACCGAGGAGGAGCCGGAGAAGCCACCACCGCTACCTCACACAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 90 bp ACTGGCTTAGGTCAGACTGTGGTAGACTTGTTGGTGCGCTGTGTGTaGCTGGCGCTAAGGGCAGCCCAACATGCTGGATTATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TGLGQTVVDLLVRCV*LALRAAQHAGLCCC
Trigger: GCAGCAGCATAATCCAGCATGTTGGGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAACAAGTCTACCACAGTCTGACCTAAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000480589.1
CDS CCA 90 bp TACATTTGGCATAGTAACAGAAGTGGTAGACACACTAGGCACGCTTaGAGCGGGCACGGCTGCAGGCACGTTTGGAACTCCGGGCACCAC +
Preference number: 5 (lower is better)
Translates to: YIWHSNRSGRHTRHA*SGHGCRHVWNSGHH
Trigger: GTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCAAGCGTGCCTAGTGTGTCTACCACTTCTGTTACTATGCCAAATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 90 bp ATGGCTGCTCAGCTGTTGCGACTGGGCCAGAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGTAGACACACTAGGCACGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: MAAQLLRLGQRRGYI*HSNRSGRHTRHAWS
Trigger: GCTCCAAGCGTGCCTAGTGTGTCTACCACTTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp TGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGCGGCTGCTGTGGAGGTaGCGTTGGCTGCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CYQDWPVGLGVGIIDHCLRLLWR*RWLRRL
Trigger: CAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCCG...CAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS GCA 90 bp ATTATGCTGCTGCTCCTGCTGACTGGCGTATGGCTGCTCAGCTGTTaGGACTGGGCCAGAGGCGCGGGTACATTTGGCATAGTAACAGAA +
Preference number: 5 (lower is better)
Translates to: IMLLLLLTGVWLLSC*DWARGAGTFGIVTE
Trigger: TTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCAGCGGAGCCGAGCTTaGAGCCACAGCCCCACCTAC +
Preference number: 5 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMQRSRA*SHSPTY
Trigger: GTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 90 bp GCTGTGTCTAATGCAATCCCCGGATCTAGTCAGGACGCTGCTGTCTaGATCCCTCTCATAGTATTCCATACACGTCCATCGGCCGCGTCT +
Preference number: 5 (lower is better)
Translates to: AVSNAIPGSSQDAAV*IPLIVFHTRPSAAS
Trigger: AGACGCGGCCGATGGACGTGTATGGAATACTATGAGAGGGATTCAGACAGCAGCGTCCTGACTAGATCCGGGGATTGCATTAGACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATAACGACTCCTCCTCCGTaGGCGGGAGCAGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLITTPPP*AGAAAA
Trigger: GGCGGCTGCTGCTCCCGCCAACGGAGGAGGAGTCGT...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGACTGTGGTAGACTTGTaGGTGCGCTGTGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: RLCYHCLLLRSATRIGLLTVVDL*VRCVCL
Trigger: CAGGCACACACAGCGCACCAACAAGTCTACCACAGT...CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR CAA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGGCTGCTGTGGAGGTaGCGTTGGCTGCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: STLYSICVCVCVCVCVCVRLLWR*RWLRRL
Trigger: CAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCCG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAGCGCGGCTGCCATCATaGGCTGCGGCCCGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVARLPS*AAARSR
Trigger: CCGCGACCGGGCCGCAGCCAATGATGGCAGCCGCGC...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCAGACTGTGGTAGACTaGTTGGTGCGCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVQTVVD*LVRCVC
Trigger: GCACACACAGCGCACCAACAAGTCTACCACAGTCTG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR CAA 90 bp TGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATTAACTGAAGGGGGTTaGCCAGGGAATCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: CLLLRSATRIGLLGWELGLTEGG*PGNLQQ
Trigger: CTGTTGCAGATTCCCTGGCAAACCCCCTTCAGTTAA...TCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGAAGTGCTACCAGGATaGGCCTGTTGGGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVEVLPG*ACWVGS
Trigger: ACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTC...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGCTGTGCTATCACTGCTaGCTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: HCLLLRSATRIGLLGWELLCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAG...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp AGGCTGTGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGTTAACTGAAGGGGGTTaGCCAGGGAATCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: RLCYHCLLLRSATRIGLLLTEGG*PGNLQQ
Trigger: CTGTTGCAGATTCCCTGGCAAACCCCCTTCAGTTAA...CAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp TGCTATCACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGCTGTGCTATCACTGCTaGCTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: CYHCLLLRSATRIGLLGWLCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAG...CCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTGATAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGAAGTGCTACCAGGATaGGCCTGTTGGGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMEVLPG*ACWVGS
Trigger: ACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTCGGCTGCAGGCACGTTaGGAACTCCGGGCACCACGG +
Preference number: 5 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGRLQAR*ELRAPR
Trigger: CCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCG...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCAGACTGTGGTAGACTaGTTGGTGCGCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDQTVVD*LVRCVC
Trigger: GCACACACAGCGCACCAACAAGTCTACCACAGTCTG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACGGCTGCTGTGGAGGTaGCGTTGGCTGCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVRLLWR*RWLRRL
Trigger: CAGCCTCCGCAGCCAACGCAACCTCCACAGCAGCCG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGTTAACTGAAGGGGGTTaGCCAGGGAATCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLTEGG*PGNLQQ
Trigger: CTGTTGCAGATTCCCTGGCAAACCCCCTTCAGTTAA...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp CTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGGATATATCCCAGAGGCTCTTaGATTCCTTTAACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: LAVEKCYQDWPVGLGVGIYPRGS*IPLTCS
Trigger: TGAACACGTTAAAGGAATCAAAGAGCCTCTGGGATA...TATCCCAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CAA 90 bp CACTGCTTGCTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGTTGGGAGTTGGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCT +
Preference number: 5 (lower is better)
Translates to: HCLLLRSATRIGLLGWELACSIL*SMATTP
Trigger: AGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...CAACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTCTCAACAGCAAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CAA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAGAAGTGCTACCAGGATaGGCCTGTTGGGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEEVLPG*ACWVGS
Trigger: ACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTC...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGCTGTGCTATCACTGCTaGCTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMLCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAG...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACAGCTGGGGGAAGGGTaGACAGTAGGGATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GQTHNQSMATCFRIKWKEQLGEG*TVGIVW
Trigger: CCAAACTATCCCTACTGTCAACCCTTCCCCCAGCTG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGGCGGGGGAGATGACTaGAGGTCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPGGGDD*RSGVQD
Trigger: GTCTTGAACTCCTGACCTCAAGTCATCTCCCCCGCC...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCTCCCGTGGTCCAGCTaGATCACGCGAAAACGGGAA +
Preference number: 5 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLLPWSS*ITRKRE
Trigger: TTCCCGTTTTCGCGTGATCAAGCTGGACCACGGGAG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACAGACTGTGGTAGACTaGTTGGTGCGCTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIQTVVD*LVRCVC
Trigger: GCACACACAGCGCACCAACAAGTCTACCACAGTCTG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVPKHGY*LSYKVE
Trigger: TTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480589.1
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAAAGCAGCTCTTCTTCTaGGCCGGCATCTTGGACATG +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPKQLFF*AGILDM
Trigger: CATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCTT...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGACTGTGGTAGACTTGTaGGTGCGCTGTGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLTVVDL*VRCVCL
Trigger: CAGGCACACACAGCGCACCAACAAGTCTACCACAGT...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GTCAATGGCTACAACACCTCCCCCAGATGCACAATTTATGACCTGATGACACTCCTTGGTAGAAAGCAGTaGAAGGATTCCTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: VNGYNTSPRCTIYDLMTLLGRKQ*KDSCLH
Trigger: ATGAAGACAGGAATCCTTCAACTGCTTTCTACCAAG...GAGTGTCATCAGGTCATAAATTGTGCATCTGGGGGAGGTGTTGTAGCCATTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CAA 90 bp CCTGTTGGGTTGGGAGTTGGGATAATTGATCATTGCTTGAAAGAGATTTTAACAGAAGTGCTACCAGGATaGGCCTGTTGGGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: PVGLGVGIIDHCLKEILTEVLPG*ACWVGS
Trigger: ACTCCCAACCCAACAGGCCAATCCTGGTAGCACTTC...TGTTAAAATCTCTTTCAAGCAATGATCAATTATCCCAACTCCCAACCCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480589.1
ENST00000485421.1
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATCCGCATCCCCAACATaGTTAAGCGTCTCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPSASPT*LSVSSE
Trigger: TTCCGAAGAGACGCTTAACAATGTTGGGGATGCGGA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACTGTGCTATCACTGCTaGCTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLILCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAGCAAGCAGTGATAGCACAG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGACTCCATTACACAGCTTaGCTTCTTTGGTTACAAAGT +
Preference number: 5 (lower is better)
Translates to: ISQLPVSATLTYLPSATGLHYTA*LLWLQS
Trigger: ACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAG...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATACAATGGACCATGAGTaGAGTATCTTCTCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDTMDHE*SIFSCR
Trigger: ACGACAGGAGAAGATACTCAACTCATGGTCCATTGT...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAAAGCTTATGTGGGACCTaGCTCTATGGGCATTACACT +
Preference number: 5 (lower is better)
Translates to: GQTHNQSMATCFRIKWKESLCGT*LYGHYT
Trigger: AGTGTAATGCCCATAGAGCAAGGTCCCACATAAGCT...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGATGGGGAAAGTTAGGTTaGAATTGTAGACAATTACCG +
Preference number: 5 (lower is better)
Translates to: ISQLPVSATLTYLPSATGWGKLG*NCRQLP
Trigger: CGGTAATTGTCTACAATTCAAACCTAACTTTCCCCA...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGATTATTAAGAGGCTaGAAGCAGAAGGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: STLYSICVCVCVCVCVCVGLLRG*KQKEVG
Trigger: TCCCACCTCCTTCTGCTTCAAGCCTCTTAATAATCC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAACTGTGGTAGACTTGTaGGTGCGCTGTGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVTVVDL*VRCVCL
Trigger: CAGGCACACACAGCGCACCAACAAGTCTACCACAGT...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGTTAACTGAAGGGGGTTaGCCAGGGAATCTGCAACAG +
Preference number: 5 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLLTEGG*PGNLQQ
Trigger: CTGTTGCAGATTCCCTGGCAAACCCCCTTCAGTTAA...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp TGGGTAATAGGAAACATGGGAGAGCCACCAAAACTCTTAAAGACCCCACTCATGGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCT +
Preference number: 5 (lower is better)
Translates to: WVIGNMGEPPKLLKTPLMACSIL*SMATTP
Trigger: AGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...CATGAGTGGGGTCTTTAAGAGTTTTGGTGGCTCTCCCATGTTTCCTATTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp GTCAATGGCTACAACACCTCCCCCAGATGCACAATTTATGACCTGATGACACTCCACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: VNGYNTSPRCTIYDLMTLHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...GAGTGTCATCAGGTCATAAATTGTGCATCTGGGGGAGGTGTTGTAGCCATTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485421.1
CDS-3UTR CAA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCCAAAGCATGGCTACTaGCTTTCGTATAAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDPKHGY*LSYKVE
Trigger: TTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS-3UTR CAA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAATTGAGTTCTCTTTTCTaGTGCTTGGAACACCCTTCC +
Preference number: 5 (lower is better)
Translates to: GQTHNQSMATCFRIKWKELSSLF*CLEHPS
Trigger: GGAAGGGTGTTCCAAGCACAAGAAAAGAGAACTCAA...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp ATTTCTCAGCTTCCAGTTTCAGCTACTCTAACCTACCTCCCATCTGCCACTGGAGTTGAACTGTGGCATTaGCCTTGTTTTAAAATTCAG +
Preference number: 5 (lower is better)
Translates to: ISQLPVSATLTYLPSATGVELWH*PCFKIQ
Trigger: CTGAATTTTAAAACAAGGCAAATGCCACAGTTCAAC...TCCAGTGGCAGATGGGAGGTAGGTTAGAGTAGCTGAAACTGGAAGCTGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GGCCAAACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACTCAAATTGTCAATTTaGAGGGCTGGGTTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: GQTHNQSMATCFRIKWKELKLSI*RAGFCP
Trigger: AGGACAAAACCCAGCCCTCAAAATTGACAATTTGAG...TTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGATGGCATTCCTGTAAGACTGTGCCTCCAAATTGGGATCTCAATCAGTTAATACATCTGCCACTGGAATaGTGCACATCCAGCATAATT +
Preference number: 5 (lower is better)
Translates to: RWHSCKTVPPNWDLNQLIHLPLE*CTSSII
Trigger: AATTATGCTGGATGTGCACAATTCCAGTGGCAGATG...TATTAACTGATTGAGATCCCAATTTGGAGGCACAGTCTTACAGGAATGCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTTCCCTTATTTaGCTGAGATTGAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: STLYSICVCVCVCVCVCVCTSLI*LRLSFS
Trigger: AGAGAAGCTCAATCTCAGCAAAATAAGGGAAGTGCA...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCACTTGGTAGAAAGCAGTaGAAGGATTCCTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPLGRKQ*KDSCLH
Trigger: ATGAAGACAGGAATCCTTCAACTGCTTTCTACCAAG...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCT +
Preference number: 5 (lower is better)
Translates to: STLYSICVCVCVCVCVCVACSIL*SMATTP
Trigger: AGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp CATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCAGTGGCACACAAGGATCACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: HGYLLSYKVERTPVAHKDHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...ATCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGCCTAACCCCTACTATTaGTTTTTGGTGTGGCAAGCT +
Preference number: 5 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLPNPYY*FLVWQA
Trigger: AGCTTGCCACACCAAAAACAAATAGTAGGGGTTAGG...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCACGGATAACATTTGGATaGCAGCAGGCAAGAGTATTT +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPRITFG*QQARVF
Trigger: AAATACTCTTGCCTGCTGCAATCCAAATGTTATCCG...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGTACACTATACAGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: STLYSICVCVCVCVCVCVHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...CACACACACACACACACACACACACACACACACACAAATACTGTATAGTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGGGTAAAATGCAGACTTaGCTCGCTTTAATAAACCCC +
Preference number: 5 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLGKMQT*LALINP
Trigger: GGGGTTTATTAAAGCGAGCAAAGTCTGCATTTTACC...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AGTGTATTGTACACTAGCTCAGCTCCACCAAACTACCTGTTCGTTCTCTTTTATAAGTCATACGAAATGTaGAAAAGCAGAGGAATCGTG +
Preference number: 5 (lower is better)
Translates to: SVLYTSSAPPNYLFVLFYKSYEM*KSRGIV
Trigger: CACGATTCCTCTGCTTTTCAACATTTCGTATGACTT...ATAAAAGAGAACGAACAGGTAGTTTGGTGGAGCTGAGCTAGTGTACAATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCCAGTCACTGGAGGCTaGATTATAAAACGTTATCTC +
Preference number: 5 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLPVTGG*IIKRYL
Trigger: GAGATAACGTTTTATAATCAAGCCTCCAGTGACTGG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAACCATCCCTGACTGTACATAGTAACAAGTATTCCTCACTGCATTATCAGTTGCACATCCAGCATAATTaGAGCATAGTATCCCATTGC +
Preference number: 5 (lower is better)
Translates to: KPSLTVHSNKYSSLHYQLHIQHN*SIVSHC
Trigger: GCAATGGGATACTATGCTCAAATTATGCTGGATGTG...CAACTGATAATGCAGTGAGGAATACTTGTTACTATGTACAGTCAGGGATGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTTTACAACTAGTGTATaGTACACTAGCTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLFTTSV*YTSSAP
Trigger: TGGAGCTGAGCTAGTGTACAATACACTAGTTGTAAA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTAAATGTCACAAAGTGCTaGCCACTGAGCCATAAAGCT +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVNVTKC*PLSHKA
Trigger: AGCTTTATGGCTCAGTGGCAAGCACTTTGTGACATT...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AACACACAACCAAAGCATGGCTACTTGCTTTCGTATAAAGTGGAAAGAACACCATCACTGCATTATCAGTaGGCTTATTATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: NTQPKHGYLLSYKVERTPSLHYQ*AYYVLK
Trigger: TTTGAGGACATAATAAGCCAACTGATAATGCAGTGA...TGGTGTTCTTTCCACTTTATACGAAAGCAAGTAGCCATGCTTTGGTTGTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATATCCCAGAGGCTCTTaGATTCCTTTAACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVYPRGS*IPLTCS
Trigger: TGAACACGTTAAAGGAATCAAAGAGCCTCTGGGATA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTTACACATCCTTAGGGTaGCTTACTCAAGCCTATGTA +
Preference number: 5 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGYTSLG*LTQAYV
Trigger: TACATAGGCTTGAGTAAGCAACCCTAAGGATGTGTA...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATCTGTGAACTTTAACTaGCTTCAGAGTGCCTCACTT +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVSVNFN*LQSASL
Trigger: AAGTGAGGCACTCTGAAGCAAGTTAAAGTTCACAGA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp GCAGGATGGAGAGGGATAGTGAGAGATTTTTATTATACTATGCAGAAAGGTTTGTCTTATTTTTCTTATTaGATGATTCCATGGCGGGGT +
Preference number: 5 (lower is better)
Translates to: AGWRGIVRDFYYTMQKGLSYFSY*MIPWRG
Trigger: ACCCCGCCATGGAATCATCAAATAAGAAAAATAAGA...CAAACCTTTCTGCATAGTATAATAAAAATCTCTCACTATCCCTCTCCATCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTACTCCATTACACAGCTTaGCTTCTTTGGTTACAAAGT +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVLHYTA*LLWLQS
Trigger: ACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAG...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp AAAATGCAGACTTTGCTCGCTTTAATAAACCCCATCTATTATTCTCCTTGTGTATTTACAACTAGTGTATaGTACACTAGCTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: KMQTLLALINPIYYSPCVFTTSV*YTSSAP
Trigger: TGGAGCTGAGCTAGTGTACAATACACTAGTTGTAAA...TACACAAGGAGAATAATAGATGGGGTTTATTAAAGCGAGCAAAGTCTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000466814.1
CDS-3UTR CAA 90 bp ATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTATAGGTATGGGTGATACACAATaGTCTTTAAAAGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IRVLDKNMRYESGSKIIGMGDTQ*SLKEAV
Trigger: CACAGCCTCTTTTAAAGACAATTGTGTATCACCCAT...ACCTATAATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 90 bp CGGCCCGGTCGCGGCTCCCGGGAACGGCGGCAGCGGAGCCGAGCTTaGAGCCACAGCCCCACCTACGGGTGGCGGCGGCGGCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: RPGRGSRERRQRSRA*SHSPTYGWRRRLWL
Trigger: CAGCCACAGCCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTGCCGCCGTTCCCGGGAGCCGCGACCGGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp GCGGCTCCCGGGAACGGCGGCAGCGGAGCCGAGCTTTaGGCCACAGCCCCACCTACGGGTGGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: AAPGNGGSGAEL*ATAPPTGGGGG
Trigger: GCCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTGCCGCCGTTCCCGGGAGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp TGGGGCTGGCTGGGCTGCGCGGCTGCCATCATTGGCTaGGGCCCGGTCGCGGCTCCCGGGAACGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: WGWLGCAAAIIG*GPVAAPGNGGS
Trigger: GCTGCCGCCGTTCCCGGGAGCCGCGACCGGGCCGCAGCCAATGATGGCAGCCGCGCAGCCCAGCCAGCCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CGCTGCGGCGCCGGTGGACGAGGGCTGCGCGGGGCTTaGCGGCTGCAGGCCGGCCACGTGCTGCTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: RCGAGGRGLRGA*RLQAGHVLLQV
Trigger: TACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCCCTCGTCCACCGGCGCCGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CCGAGGAAGCATTCTGGCCGGTGCCCACGGGAAGGGTaGCCGCCGTGGCGGGGCTCGCTGCGGCGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: PRKHSGRCPREG*PPWRGSLRRRW
Trigger: CCACCGGCGCCGCAGCGAGCCCCGCCACGGCGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 72 bp CGCGGCTCCCGGGAACGGCGGCAGCGGAGCCGAGCTTaGAGCCACAGCCCCACCTACGGGTGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RGSRERRQRSRA*SHSPTYGWRRR
Trigger: CCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCGCTGCCGCCGTTCCCGGGAGCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp AGGCTGAGATGGGGCTGCAGTCACTGGCCCGGCGGATaGGCCCGCGAGCTGGGGGCCGCCGGGTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RLRWGCSHWPGG*ARELGAAGCSG
Trigger: CCCGGAGCACCCGGCGGCCCCCAGCTCGCGGGCTCATCCGCCGGGCCAGTGACTGCAGCCCCATCTCAGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp CTGCCACCCATCTGCGGCGGAGGCACGGACTGGGGCTaGCCAGCCCCGGCAGGACCGAGGCACGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: LPPICGGGTDWG*PAPAGPRHGCT
Trigger: GGTGCAGCCGTGCCTCGGTCCTGCCGGGGCTGGGCAGCCCCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp GGGCGGGGGCCGAAGTGGCAGCCGCCGCCAGGGTACTaGCGAGCGCCCCAGACACGCTCCGGGCCGAAACGA +
Preference number: 6 (lower is better)
Translates to: GRGPKWQPPPGY*RAPQTRSGPKR
Trigger: TCGTTTCGGCCCGGAGCGTGTCTGGGGCGCTCGCCAGTACCCTGGCGGCGGCTGCCACTTCGGCCCCCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp GGACCACTGCCACCCATCTGCGGCGGAGGCACGGACTaGGGCTGCCCAGCCCCGGCAGGACCGAGGCACGGC +
Preference number: 6 (lower is better)
Translates to: GPLPPICGGGTD*GCPAPAGPRHG
Trigger: GCCGTGCCTCGGTCCTGCCGGGGCTGGGCAGCCCCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GCGGGGCTTGGCGGCTGCAGGCCGGCCACGTGCTGCTaGAGGTACTCACTCTGGCCGGAGGGCTGGACGGGC +
Preference number: 6 (lower is better)
Translates to: AGLGGCRPATCC*RYSLWPEGWTG
Trigger: GCCCGTCCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GGCTGCGCGGGGCTTGGCGGCTGCAGGCCGGCCACGTaGTGCTGCAGGTACTCACTCTGGCCGGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GCAGLGGCRPAT*CCRYSLWPEGW
Trigger: CCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp GCGCCCATGAGCTGCGCGCCCACCGAGGAAGCATTCTaGCCGGTGCCCACGGGAAGGGTGGCCGCCGTGGCG +
Preference number: 6 (lower is better)
Translates to: APMSCAPTEEAF*PVPTGRVAAVA
Trigger: CGCCACGGCGGCCACCCTTCCCGTGGGCACCGGCCAGAATGCTTCCTCGGTGGGCGCGCAGCTCATGGGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp GACCGCTGGCACGGGACCGGAGGCGCCCCGGCTGTGTaGGGTAGCGGTGGTGGCTTCTCCGGCTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: DRWHGTGGAPAV*GSGGGFSGSSS
Trigger: CGAGGAGGAGCCGGAGAAGCCACCACCGCTACCTCACACAGCCGGGGCGCCTCCGGTCCCGTGCCAGCGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GAGGCGGCGAGAGCGCGAACCCAGGGGCGGGCCGGCTaGTTCCTCTCTCGTCTCCGGGCAGCCGTGGTCAGT +
Preference number: 6 (lower is better)
Translates to: EAARARTQGRAG*FLSRLRAAVVS
Trigger: ACTGACCACGGCTGCCCGGAGACGAGAGAGGAAGCAGCCGGCCCGCCCCTGGGTTCGCGCTCTCGCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp TGCGCGGGGCTTGGCGGCTGCAGGCCGGCCACGTGCTaGTGCAGGTACTCACTCTGGCCGGAGGGCTGGACG +
Preference number: 6 (lower is better)
Translates to: CAGLGGCRPATC*CRYSLWPEGWT
Trigger: CGTCCAGCCCTCCGGCCAGAGTGAGTACCTGCAGCAGCACGTGGCCGGCCTGCAGCCGCCAAGCCCCGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp AGATGCCTAATTCAGCCGGGAGCCGCGGGCCGGAGCTaGCTGAAGGTCCGCGGGCGGGCGGTGGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RCLIQPGAAGRS*LKVRGRAVGLW
Trigger: CCACAGCCCCACCGCCCGCCCGCGGACCTTCAGCCAGCTCCGGCCCGCGGCTCCCGGCTGAATTAGGCATCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp ACGCCTCCCACAGTAGCCGGGGGCACTCCAGTCGGCTaGCAAGGCGCGACCTGCCCGCCTTGCGCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: TPPTVAGGTPVG*QGATCPPCAGP
Trigger: GGGACCAGCGCAAGGCGGGCAGGTCGCGCCTTGTCAGCCGACTGGAGTGCCCCCGGCTACTGTGGGAGGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp CAGGCCGGTGCCGGCGTCAGCGCTGGGCTCTCTGACTaGGGGAAGGAGCGGCGAGTCCGGAGTCGGAGATGC +
Preference number: 6 (lower is better)
Translates to: QAGAGVSAGLSD*GKERRVRSRRC
Trigger: GCATCTCCGACTCCGGACTCGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGCGCTGACGCCGGCACCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp TCCTCAGGCCGGTGCCGGCGTCAGCGCTGGGCTCTCTaGCTGAGGGAAGGAGCGGCGAGTCCGGAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: SSGRCRRQRWAL*LREGAASPESE
Trigger: CTCCGACTCCGGACTCGCCGCTCCTTCCCTCAGTCAGAGAGCCCAGCGCTGACGCCGGCACCGGCCTGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp GGGCCATGGCTTCGCTGGGCTGGGAAGACGCGCCCATaGGCTGCGCGCCCACCGAGGAAGCATTCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: GPWLRWAGKTRP*AARPPRKHSGR
Trigger: CCGGCCAGAATGCTTCCTCGGTGGGCGCGCAGCTCATGGGCGCGTCTTCCCAGCCCAGCGAAGCCATGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp CGTGAGGGCCACCAGGTACGGCTGACAGCGGACCACTaGCACCCATCTGCGGCGGAGGCACGGACTGGGGCT +
Preference number: 6 (lower is better)
Translates to: REGHQVRLTADH*HPSAAEARTGA
Trigger: AGCCCCAGTCCGTGCCTCCGCCGCAGATGGGTGGCAGTGGTCCGCTGTCAGCCGTACCTGGTGGCCCTCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp AGGCACGCTTGGAGCGGGCACGGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGCGTGAGGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: RHAWSGHGCRHV*NSGHHGVRATR
Trigger: CCTGGTGGCCCTCACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCAAGCGTGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GAGCTGTCAGTTCCCGACTCGGGCCCGTGCGCCCCCTaGATGGAGGCCACTACTACCACCACCGACCCTCCG +
Preference number: 6 (lower is better)
Translates to: ELSVPDSGPCAP*MEATTTTTDPP
Trigger: CGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAGTCGGGAACTGACAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GCAGGGCCCGGCTGCGGAGGCAGGGACATAGCCGGCTaGGCCAGGGTTACATTCGTCGGCGGCAGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: AGPGCGGRDIAG*ARVTFVGGRVC
Trigger: ACAGACTCTGCCGCCGACGAATGTAACCCTGGCGCAGCCGGCTATGTCCCTGCCTCCGCAGCCGGGCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp TGTCAGTTCCCGACTCGGGCCCGTGCGCCCCCTGCATaGAGGCCACTACTACCACCACCGACCCTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: CQFPTRARAPPA*RPLLPPPTLRW
Trigger: CCACCGGAGGGTCGGTGGTGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAGTCGGGAACTGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp GCTGCAGGCACGTTTGGAACTCCGGGCACCACGGCGTaGGGGCCACCAGGTACGGCTGACAGCGGACCACTG +
Preference number: 6 (lower is better)
Translates to: AAGTFGTPGTTA*GPPGTADSGPL
Trigger: CAGTGGTCCGCTGTCAGCCGTACCTGGTGGCCCTCACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CGGAGCCGAGCTTTGAGCCACAGCCCCACCTACGGGTaGCGGCGGCGGCTGTGGCTGCCCAACGCTAAAACT +
Preference number: 6 (lower is better)
Translates to: RSRALSHSPTYG*RRRLWLPNAKT
Trigger: AGTTTTAGCGTTGGGCAGCCACAGCCGCCGCCGCCACCCGTAGGTGGGGCTGTGGCTCAAAGCTCGGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GGTAGACACACTAGGCACGCTTGGAGCGGGCACGGCTaGAGGCACGTTTGGAACTCCGGGCACCACGGCGTG +
Preference number: 6 (lower is better)
Translates to: GRHTRHAWSGHG*RHVWNSGHHGV
Trigger: CACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCAAGCGTGCCTAGTGTGTCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp AGCACGGGCCCCCAAAGACAAAGTCCGAGTCTGCGCTaGGGTCTGAGGCCCGCCGCTGTTAAGAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: STGPQRQSPSLR*GLRPAAVKSHG
Trigger: CCCGTGACTCTTAACAGCGGCGGGCCTCAGACCCCAGCGCAGACTCGGACTTTGTCTTTGGGGGCCCGTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CTTCTTGGCCGGCATCTTGGACATGGTGAAGAAGGCTaGAGGGCAGAGAGGCACGCCGGCTCCTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: LLGRHLGHGEEG*RAERHAGSSGS
Trigger: GGACCCAGAGGAGCCGGCGTGCCTCTCTGCCCTCCAGCCTTCTTCACCATGTCCAAGATGCCGGCCAAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp TGCTGGATTATGCTGCTGCTCCTGCTGACTGGCGTATaGCTGCTCAGCTGTTGCGACTGGGCCAGAGGCGCG +
Preference number: 6 (lower is better)
Translates to: CWIMLLLLLTGV*LLSCCDWARGA
Trigger: CGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAATCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 72 bp GGGGAGACGGTCCCGGGAGTCTCCGCATCCCCAACATaGTTAAGCGTCTCTTCGGAAGAGCTGCGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: GETVPGVSASPT*LSVSSEELRSQ
Trigger: CTGCGAGCGCAGCTCTTCCGAAGAGACGCTTAACAATGTTGGGGATGCGGAGACTCCCGGGACCGTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp GACGTCGAAAATCTCGGAGGAGACGTCCTCTGTGCGTaGCTCGTCCGGGTCGTCCAAGCTCTCGGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: DVENLGGDVLCA*LVRVVQALGVL
Trigger: GAGGACACCGAGAGCTTGGACGACCCGGACGAGTCACGCACAGAGGACGTCTCCTCCGAGATTTTCGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp ATCACGCGAAAACGGGAACTACATGTGGTGGGAGGCTaGGATGGGGCTGCAGTCACTGGCCCGGCGGATGAG +
Preference number: 6 (lower is better)
Translates to: ITRKRELHVVGG*DGAAVTGPADE
Trigger: CTCATCCGCCGGGCCAGTGACTGCAGCCCCATCTCAGCCTCCCACCACATGTAGTTCCCGTTTTCGCGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp CTGCTCCTGCTGACTGGCGTATGGCTGCTCAGCTGTTaGGACTGGGCCAGAGGCGCGGGTACATTTGGCATA +
Preference number: 6 (lower is better)
Translates to: LLLLTGVWLLSC*DWARGAGTFGI
Trigger: TATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp AGCTGCGCTCGCAGACCTCCTCAGGGCCATAATCCGTaGCCCGAGAGACGTCGAAAATCTCGGAGGAGACGT +
Preference number: 6 (lower is better)
Translates to: SCARRPPQGHNP*PERRRKSRRRR
Trigger: ACGTCTCCTCCGAGATTTTCGACGTCTCTCGGGCCACGGATTATGGCCCTGAGGAGGTCTGCGAGCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 90 bp AGGAGGTTTGGGGAGACGGTCCCGGGAGTCTCCGCATCCCCAACATaGTTAAGCGTCTCTTCGGAAGAGCTGCGCTCGCAGACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RRFGETVPGVSASPT*LSVSSEELRSQTSS
Trigger: TGAGGAGGTCTGCGAGCGCAGCTCTTCCGAAGAGACGCTTAACAATGTTGGGGATGCGGAGACTCCCGGGACCGTCTCCCCAAACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp CGCGTCTATAGGGCTCTCCGCTCCCGTGGTCCAGCTTaGTCACGCGAAAACGGGAACTACATGTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: RVYRALRSRGPA*SRENGNYMWWE
Trigger: CTCCCACCACATGTAGTTCCCGTTTTCGCGTGATCAAGCTGGACCACGGGAGCGGAGAGCCCTATAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GAGAGACGTCGAAAATCTCGGAGGAGACGTCCTCTGTaGGTGACTCGTCCGGGTCGTCCAAGCTCTCGGTGT +
Preference number: 6 (lower is better)
Translates to: ERRRKSRRRRPL*VTRPGRPSSRC
Trigger: ACACCGAGAGCTTGGACGACCCGGACGAGTCACGCACAGAGGACGTCTCCTCCGAGATTTTCGACGTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CTGTGTGTGCCTGGCGCTAAGGGCAGCCCAACATGCTaGATTATGCTGCTGCTCCTGCTGACTGGCGTATGG +
Preference number: 6 (lower is better)
Translates to: LCVPGAKGSPTC*IMLLLLLTGVW
Trigger: CCATACGCCAGTCAGCAGGAGCAGCAGCATAATCCAGCATGTTGGGCTGCCCTTAGCGCCAGGCACACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000480589.1
CDS CAA 90 bp ACCTGGGCCGTGGTGACACTGGTGATCTGGAAGCAGCTCTTCTTCTaGGCCGGCATCTTGGACATGGTGAAGAAGGCTGGAGGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: TWAVVTLVIWKQLFF*AGILDMVKKAGGQR
Trigger: TCTCTGCCCTCCAGCCTTCTTCACCATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCTTCCAGATCACCAGTGTCACCACGGCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CTGCTGACTGGCGTATGGCTGCTCAGCTGTTGCGACTaGGCCAGAGGCGCGGGTACATTTGGCATAGTAACA +
Preference number: 6 (lower is better)
Translates to: LLTGVWLLSCCD*ARGAGTFGIVT
Trigger: TGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 90 bp GATTATGCTGCTGCTCCTGCTGACTGGCGTATGGCTGCTCAGCTGTaGCGACTGGGCCAGAGGCGCGGGTACATTTGGCATAGTAACAGA +
Preference number: 6 (lower is better)
Translates to: DYAAAPADWRMAAQL*RLGQRRGYIWHSNR
Trigger: TCTGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTGAGCAGCCATACGCCAGTCAGCAGGAGCAGCAGCATAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GAGGTAGCGGTGGTGGCTTCTCCGGCTCCTCCTCGGTaGGCCCAATTCCTAAACCCCGAAGAAACTGAAATT +
Preference number: 6 (lower is better)
Translates to: EVAVVASPAPPR*AQFLNPEETEI
Trigger: AATTTCAGTTTCTTCGGGGTTTAGGAATTGGGCGCACCGAGGAGGAGCCGGAGAAGCCACCACCGCTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS GCA 72 bp GGTCAGACTGTGGTAGACTTGTTGGTGCGCTGTGTGTaGCTGGCGCTAAGGGCAGCCCAACATGCTGGATTA +
Preference number: 6 (lower is better)
Translates to: GQTVVDLLVRCV*LALRAAQHAGL
Trigger: TAATCCAGCATGTTGGGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAACAAGTCTACCACAGTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361875.7
ENST00000480589.1
CDS CCA 72 bp CATAGTAACAGAAGTGGTAGACACACTAGGCACGCTTaGAGCGGGCACGGCTGCAGGCACGTTTGGAACTCC +
Preference number: 6 (lower is better)
Translates to: HSNRSGRHTRHA*SGHGCRHVWNS
Trigger: GGAGTTCCAAACGTGCCTGCAGCCGTGCCCGCTCCAAGCGTGCCTAGTGTGTCTACCACTTCTGTTACTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 72 bp GTGATCTGGAAGCAGCTCTTCTTCTTGGCCGGCATCTaGGACATGGTGAAGAAGGCTGGAGGGCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: VIWKQLFFLAGI*DMVKKAGGQRG
Trigger: GCCTCTCTGCCCTCCAGCCTTCTTCACCATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCTTCCAGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CCA 72 bp CAGCTGTTGCGACTGGGCCAGAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGTAGACACACTAGGCAC +
Preference number: 6 (lower is better)
Translates to: QLLRLGQRRGYI*HSNRSGRHTRH
Trigger: GTGCCTAGTGTGTCTACCACTTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGCCCAGTCGCAACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 72 bp TTTGAAACTGGCTTAGGTCAGACTGTGGTAGACTTGTaGGTGCGCTGTGTGTGCCTGGCGCTAAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: FETGLGQTVVDL*VRCVCLALRAA
Trigger: GGCTGCCCTTAGCGCCAGGCACACACAGCGCACCAACAAGTCTACCACAGTCTGACCTAAGCCAGTTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1
CDS CAA 72 bp GTGGTGACACTGGTGATCTGGAAGCAGCTCTTCTTCTaGGCCGGCATCTTGGACATGGTGAAGAAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: VVTLVIWKQLFF*AGILDMVKKAG
Trigger: TCCAGCCTTCTTCACCATGTCCAAGATGCCGGCCAAGAAGAAGAGCTGCTTCCAGATCACCAGTGTCACCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp AATGCAATCCCCGGATCTAGTCAGGACGCTGCTGTCTaGATCCCTCTCATAGTATTCCATACACGTCCATCG +
Preference number: 6 (lower is better)
Translates to: NAIPGSSQDAAV*IPLIVFHTRPS
Trigger: CGATGGACGTGTATGGAATACTATGAGAGGGATTCAGACAGCAGCGTCCTGACTAGATCCGGGGATTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS CAA 72 bp CAACACCTCCCCCAGATGCACTATCCCAGAGGCTCTTaGATTCCTTTAACGTGTTCAAATGGAACGCTTGGT +
Preference number: 6 (lower is better)
Translates to: QHLPQMHYPRGS*IPLTCSNGTLG
Trigger: ACCAAGCGTTCCATTTGAACACGTTAAAGGAATCAAAGAGCCTCTGGGATAGTGCATCTGGGGGAGGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361875.7
CDS TCA 72 bp CAACAGGCGGCTTCACAACAGGCTTATTTTCAGCAATaGGAGAAAGTGGTGGTTGAGGTAGGGGTTCTGATT +
Preference number: 6 (lower is better)
Translates to: QQAASQQAYFQQ*EKVVVEVGVLI
Trigger: AATCAGAACCCCTACCTCAACCACCACTTTCTCTCATTGCTGAAAATAAGCCTGTTGTGAAGCCGCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361875.7
ENST00000466814.1
ENST00000480589.1