RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000146054

Ensembl transcript IDs: ENST00000274773.12, ENST00000334421.5, ENST00000393315.5, ENST00000393319.7, ENST00000422067.2, ENST00000504241.1, ENST00000509199.1

Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGC +
Preference number: 1 (lower is better)
Translates to: GSGARRADPRRTRHL*GGDIPSHRQPRDRS
Trigger: GCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 90 bp ACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGAC +
Preference number: 1 (lower is better)
Translates to: TVTLLPRGCVCSRLS*AAGVRSTEGRPKTD
Trigger: GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 90 bp GCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGA +
Preference number: 1 (lower is better)
Translates to: AGSCPEGSSHDNKRG*PRPRPAPWQQRTAG
Trigger: TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR TCA 90 bp CCTCACCGGCCTCCACCTCCTGAAGGCTCTGGCCAAATCCACATGTaGCCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTC +
Preference number: 1 (lower is better)
Translates to: PHRPPPPEGSGQIHM*PQEGNTLRSPKPLF
Trigger: GAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR TCA 90 bp TCTGGCCCAGACTGTCCTCTGAGCTGGGAGCACAGGGCTCCTCCCTaGGTAGATGACCTGTCAGGTCAGCTGGATCCAGAGGTCCCACAA +
Preference number: 1 (lower is better)
Translates to: SGPDCPLSWEHRAPP*VDDLSGQLDPEVPQ
Trigger: TTGTGGGACCTCTGGATCCAGCTGACCTGACAGGTCATCTACTCAGGGAGGAGCCCTGTGCTCCCAGCTCAGAGGACAGTCTGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 90 bp GGTCAGGATGCACCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTaGAGAGCCGTGATGCCCACTGGCTGTTGTCCCGGGCTTGTCACT +
Preference number: 1 (lower is better)
Translates to: GQDAPITLYPPAKEC*RAVMPTGCCPGLVT
Trigger: AGTGACAAGCCCGGGACAACAGCCAGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGGTGCATCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR GCA 90 bp ATTGGTCAGGATGCACCCATCACTCTGTATCCTCCGGCTAAGGAGTaGTGGAGAGCCGTGATGCCCACTGGCTGTTGTCCCGGGCTTGTC +
Preference number: 1 (lower is better)
Translates to: IGQDAPITLYPPAKE*WRAVMPTGCCPGLV
Trigger: GACAAGCCCGGGACAACAGCCAGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGGTGCATCCTGACCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR GCA 90 bp GGAATGCCCTCCAGGGCATGGGCTGAGAAGGCCTTGGCACCAGGGTaGTCTGCTGTTGGCATTTTCCTGAGTCCGTCAGGAGCATATTTG +
Preference number: 1 (lower is better)
Translates to: GMPSRAWAEKALAPG*SAVGIFLSPSGAYL
Trigger: CAAATATGCTCCTGACGGACTCAGGAAAATGCCAACAGCAGAGCACCCTGGTGCCAAGGCCTTCTCAGCCCATGCCCTGGAGGGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CCA 90 bp TGGCACTGGAAAGTGCGGGAGTCAGGGGTTTGTGAGAGCACGTGTTaGTTGTCGCATTGGTCAGGATGCACCCATCACTCTGTATCCTCC +
Preference number: 1 (lower is better)
Translates to: WHWKVRESGVCESTC*LSHWSGCTHHSVSS
Trigger: GGAGGATACAGAGTGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR TCA 90 bp AGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTTGTaGGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCACCCATCA +
Preference number: 1 (lower is better)
Translates to: SVCTLALESAGVRGL*EHVLVVALVRMHPS
Trigger: TGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR TCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: TWLAQAQTCPLATENSRTGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR TCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: TWLAQAQTCPLATENSRTPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGCCCCCTGGAGAGCTaGGCTCCTGACCTCACCGGC +
Preference number: 2 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPSPLES*APDLTG
Trigger: GCCGGTGAGGTCAGGAGCCCAGCTCTCCAGGGGGCT...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR TCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR GCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAGCCCAGGCCCAGACCTaGCCCCTGGCAACAGAGAAC +
Preference number: 2 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIAQAQT*PLATEN
Trigger: GTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGC...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTCGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCC +
Preference number: 2 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPRTRHL*GGDIPS
Trigger: GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCG...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: TSGREHPQESKAPVPLLGCSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR TCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR GCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR GCA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCACCTCCGGCTAAGGAGTaGTGGAGAGCCGTGATGCCC +
Preference number: 2 (lower is better)
Translates to: GSQGFVRARVGCRIGQDAPPAKE*WRAVMP
Trigger: GGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGG...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR CCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCC +
Preference number: 2 (lower is better)
Translates to: KAELAAVQKAAAMITNVVRTRHL*GGDIPS
Trigger: GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGTTCCCCTGCTCGGTTaGCCACAGTCACTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPVPLLG*PQSLSC
Trigger: GCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAAC...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp CCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTGGAGAGCCGTGATGCCCACTCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PITLYPPAKECWRAVMPTLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR TCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: KAELAAVQKAAAMITNVVPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR GCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCAAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRAKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CAA 90 bp CACTGGAAAGTGCGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTaGTCGCATTGGTCAGGATGCACCCATCACTCTGTATCCTCCGGC +
Preference number: 2 (lower is better)
Translates to: HWKVRESGVCESTCW*SHWSGCTHHSVSSG
Trigger: GCCGGAGGATACAGAGTGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR GCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR CCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCATGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LSPSGAYLCSVCCLELAACSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR CCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR TCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCAGCAGGACTGGCTTTaGCATTGTTTTAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: KAELAAVQKAAAMITNVVQQDWL*HCFREP
Trigger: TGGCTCCCTAAAACAATGTCAAAGCCAGTCCTGCTG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR-3UTR GCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCACCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: LSPSGAYLCSVCCLELAAPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR CCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCAGCAGCGTTTGTACTTTaGCACTGGAAAGTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: LSPSGAYLCSVCCLELAAAAFVL*HWKVRE
Trigger: CTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGC...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR CCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCATGTTGGTTGTCGCATTaGTCAGGATGCACCCATCAC +
Preference number: 2 (lower is better)
Translates to: LSPSGAYLCSVCCLELAACWLSH*SGCTHH
Trigger: GTGATGGGTGCATCCTGACCAATGCGACAACCAACA...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CAA 90 bp GTAAATAAAGTTCCAGAAGCTTTGCTCTCCTTATCCAAGCAGCGTTaGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: VNKVPEALLSLSKQR*YFGTGKCGSQGFVR
Trigger: TCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAGGAGAGCAAAGCTTCTGGAACTTTATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR-3UTR TCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGACTCTATTATCTTTCTaGAATCGATTCTGCGGTTCC +
Preference number: 2 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPTLLSF*NRFCGS
Trigger: GGAACCGCAGAATCGATTTCAGAAAGATAATAGAGT...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
3UTR CCA 72 bp GCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCCCACCGGCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: ARRADPRRTRHL*GGDIPSHRQPR
Trigger: TCTGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 72 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCC +
Preference number: 3 (lower is better)
Translates to: LLPRGCVCSRLS*AAGVRSTEGRP
Trigger: GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR GCA 72 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: GNTLRSPKPLFP*SVGHSHSPASG
Trigger: CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR GCA 72 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: PVPLLGWPQSLS*LGVVSVAGSLG
Trigger: CCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 72 bp GCACCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTaGAGAGCCGTGATGCCCACTGGCTGTTGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: APITLYPPAKEC*RAVMPTGCCPG
Trigger: CCCGGGACAACAGCCAGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR GCA 72 bp GATGCACCCATCACTCTGTATCCTCCGGCTAAGGAGTaGTGGAGAGCCGTGATGCCCACTGGCTGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: DAPITLYPPAKE*WRAVMPTGCCP
Trigger: GGGACAACAGCCAGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGGTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CCA 72 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGA +
Preference number: 3 (lower is better)
Translates to: CPEGSSHDNKRG*PRPRPAPWQQR
Trigger: TCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 72 bp AACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTaGCAACAGAGAACAGCAGGACTGGCTTTGACATTG +
Preference number: 3 (lower is better)
Translates to: NKRGWPRPRPAP*QQRTAGLALTL
Trigger: CAATGTCAAAGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR TCA 72 bp CCTCCACCTCCTGAAGGCTCTGGCCAAATCCACATGTaGCCTCAGGAAGGGAACACCCTCAGGAGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: PPPPEGSGQIHM*PQEGNTLRSPK
Trigger: CTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAGCCTTCAGGAGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
3UTR CCA 72 bp TCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTaGTCAGGATGCACCCATCACTCTGTATCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: SGVCESTCWLSH*SGCTHHSVSSG
Trigger: GCCGGAGGATACAGAGTGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CCA 72 bp AAAGTGCGGGAGTCAGGGGTTTGTGAGAGCACGTGTTaGTTGTCGCATTGGTCAGGATGCACCCATCACTCT +
Preference number: 3 (lower is better)
Translates to: KVRESGVCESTC*LSHWSGCTHHS
Trigger: AGAGTGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CCA 72 bp GCTCTCCTTATCCAAGCAGCGTTTGTACTTTGGCACTaGAAAGTGCGGGAGTCAGGGGTTTGTGAGAGCACG +
Preference number: 3 (lower is better)
Translates to: ALLIQAAFVLWH*KVRESGVCEST
Trigger: CGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR TCA 72 bp CCTTGGCACCAGGGTGCTCTGCTGTTGGCATTTTCCTaGGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: PWHQGALLLAFS*VRQEHICALCV
Trigger: AACACACAGAGCACAAATATGCTCCTGACGGACTCAGGAAAATGCCAACAGCAGAGCACCCTGGTGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCCGCACGCGCGACAGGTaGCCGCAGCTGAGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPRTRDR*PQLRGD
Trigger: GTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCG...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCTACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GWPRPRPAPWQQRTAGLATGARS*GATARG
Trigger: GCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGT...AGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGGAGAGACTGGGGACTaGCGCCCGAGCCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRGETGD*RPSLPA
Trigger: GGCGGGGAGGCTCGGGCGGCAGTCCCCAGTCTCTCC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR GCA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCAGTCCCACAGCCGCCATaGGCGCTCTCCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: QDGPGISGEATSPPTGSPVPQPP*ALSAHP
Trigger: TGGGTGCGCGGAGAGCGCGCATGGCGGCTGTGGGAC...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR GCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSWPPLS*RAQTPS
Trigger: GGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCA...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCGCCCAGGCCCAGACCTaGCCCCTGGCAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPAQAQT*PLATEN
Trigger: GTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGC...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGTGGTTGGGCAGGTCCTaGGCCCGCTCGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QQGSGARRADPRRTRHLWWLGRS*ARSPRR
Trigger: GCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCA...CCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCGATCCAGAGAGAGGATaGGGCGCGGGTTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPDPERG*GAGWPC
Trigger: ACACGGCCAACCCGCGCCTCATCCTCTCTCTGGATC...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGAGTACTGGCCGCCGTTaGGCTGCAGGGCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRSTGRR*AAGPRR
Trigger: GCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACT...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGAACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGTGARS*GATARG
Trigger: GCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGT...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPWPPLS*RAQTPS
Trigger: GGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCA...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHWPPLS*RAQTPS
Trigger: GGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCA...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCCCTCCGGCTAAGGAGTaGTGGAGAGCCGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPPPAKE*WRAVMP
Trigger: GGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGG...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGGCGGCTGCGTGGCTGTaGCGGAGACTTCCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARAAAWL*RRLPAG
Trigger: GCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGC...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGCCGCCAGCTGCCGGTTaGGCCGCAGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARPPAAG*AAADWG
Trigger: GCCCCAGTCAGCTGCGGCCCAACCGGCAGCTGGCGG...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTTGGTTGGGCAGGTCCTaGGCCCGCTCGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTWLGRS*ARSPRR
Trigger: GCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCA...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCTCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGSKRQG*LGRSWA
Trigger: GGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGA...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGGCGACCGCTCGGGGCTaGTCACGGCCCAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGATARG*SRPSTG
Trigger: GCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGC...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGAGCCCCCTGGAGAGCTaGGCTCCTGACCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRSPLES*APDLTG
Trigger: GCCGGTGAGGTCAGGAGCCCAGCTCTCCAGGGGGCT...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTCAGCCGCGGGCAGGCTaGAGCGCCGCAGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGQPRAG*SAAGAW
Trigger: CCACGCTCCTGCGGCGCTTCAGCCTGCCCGCGGCTG...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR TCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCGCCCTCCTCGGGAGTaGAGGGCGTCAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHRPPRE*RASGPF
Trigger: GAAAGGGCCTGACGCCCTTCACTCCCGAGGAGGGCG...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCACGCCCTCCTCGGGAGTaGAGGGCGTCAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPARPPRE*RASGPF
Trigger: GAAAGGGCCTGACGCCCTTCACTCCCGAGGAGGGCG...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGACGAGGTGGGGACTTTaGGCAGAGCCCGCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRTRWGL*AEPASG
Trigger: CCCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGT...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCTGGGGCCAGGCACATTaGTACACCTGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPWGQAH*YTCSAC
Trigger: GCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCA...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCCGCACGCGCGACAGGTaGCCGCAGCTGAGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPRTRDR*PQLRGD
Trigger: GTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCG...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCCGCACGCGCGACAGGTaGCCGCAGCTGAGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: RKGTPSGVQSPCSPARLARTRDR*PQLRGD
Trigger: GTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCG...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCGCGGCTGCGTGGCTGTaGCGGAGACTTCCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPAAAWL*RRLPAG
Trigger: GCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGC...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCGCACACCACGCAGATaGCGCGTCCGTCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASRTPRR*RVRRPG
Trigger: GCCAGGACGACGGACGCGCCATCTGCGTGGTGTGCG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGTTGGGCAGGTCCTaGGCCCGCTCGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPWLGRS*ARSPRR
Trigger: GCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCA...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACTCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDSKRQG*LGRSWA
Trigger: GGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGA...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATGCGACCGCTCGGGGCTaGTCACGGCCCAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHATARG*SRPSTG
Trigger: GCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGC...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCCCCAGACCTGCCCCCTaGCAACAGAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPPRPAP*QQRTAG
Trigger: TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGG...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATAGTACTGGCCGCCGTTaGGCTGCAGGGCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHSTGRR*AAGPRR
Trigger: GCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACT...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATTTCCCAGGGGAGCGCTaGGCAGGGAGTAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHFPGER*AGSSPL
Trigger: CAGTGGGCTACTCCCTGCTCAGCGCTCCCCTGGGAA...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACACGTCGCCTCGCCCTaGAGCTCTGCCGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGHVASP*SSAASA
Trigger: AGCGCTGGCGGCAGAGCTGCAGGGCGAGGCGACGTG...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR GCA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCAAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QDGPGISGEATSPPTGSPSSRPS*STRKAL
Trigger: GAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCT...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSWPPLS*RAQTPS
Trigger: GGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCA...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGCCCAGGCCCAGACCTaGCCCCTGGCAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QQGSGARRADPRRTRHLWAQAQT*PLATEN
Trigger: GTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGC...CCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCACCTCCGGCTAAGGAGTaGTGGAGAGCCGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: QDGPGISGEATSPPTGSPPPAKE*WRAVMP
Trigger: GGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGG...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAAGATCTGGTCGCGCCTaGGCGGCCACTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPARSGRA*AATGPH
Trigger: GTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCT...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCGCGACCGCTCGGGGCTaGTCACGGCCCAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPATARG*SRPSTG
Trigger: GCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGC...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCACGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPARTRHL*GGDIPS
Trigger: GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCG...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCCCCCTGGAGAGCTaGGCTCCTGACCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRSPLES*APDLTG
Trigger: GCCGGTGAGGTCAGGAGCCCAGCTCTCCAGGGGGCT...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCGGGAGCCCCCTCCCTaGACATCTTGGCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASREPPP*TSWRGP
Trigger: AGGACCTCGCCAAGATGTCCAGGGAGGGGGCTCCCG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR TCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGGCTTGGACAGCTGGGTaGTCTCAACCCCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGAWTAG*SQPRAG
Trigger: CCCAGCTCGGGGTTGAGATCACCCAGCTGTCCAAGC...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTAGTACTGGCCGCCGTTaGGCTGCAGGGCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSSTGRR*AAGPRR
Trigger: GCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACT...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCAGGAAGGGAGTCCTGTaGAGTTGGGAGACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPRKGVL*SWETWV
Trigger: AACCCAGGTCTCCCAACTTCACAGGACTCCCTTCCT...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR GCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGCCCCCACCTTCTCCTaGTCCGCTGCCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGAPTFS*SAAICF
Trigger: GAAACAGATGGCAGCGGAGCAGGAGAAGGTGGGGGC...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGCCCCCACCTTCTCCTaGTCCGCTGCCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRAPTFS*SAAICF
Trigger: GAAACAGATGGCAGCGGAGCAGGAGAAGGTGGGGGC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCCAGGAAAGCCCTCAGTaGCTGGAACTCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGQESPQ*LELCPH
Trigger: GTGGGGGCAGAGTTCCAGGCACTGAGGGCTTTCCTG...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCAAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: QDGPGISGEATSPPTGSPKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTCCGCGGGCAGAGAGCTaGGGAGACGCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSPRAES*GDADQA
Trigger: AGCCTGGTCTGCGTCTCCGCAGCTCTCTGCCCGCGG...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR GCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCAGTGGGGGCAGCGGCTaGGTGGCTGTGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGSGGSG*VAVPET
Trigger: AGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACT...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCAGAGCTCTAGGCAGATaGAGCACGTCGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGRALGR*STSPRP
Trigger: AGGGCGAGGCGACGTGCTCCATCTGCCTAGAGCTCT...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGATCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGSKRQG*LGRSWA
Trigger: GGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGA...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTTCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSSKRQG*LGRSWA
Trigger: GGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGA...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGCCAGGACGCGGGTGTTaGTGTCGAAGCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRPGRGC*CRSGRG
Trigger: ACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGG...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCAGGACGCGGGTGTTaGTGTCGAAGCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHPGRGC*CRSGRG
Trigger: ACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGCGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRRTRHL*GGDIPS
Trigger: GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCG...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCAGCCCCCTGGAGAGCTaGGCTCCTGACCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGSPLES*APDLTG
Trigger: GCCGGTGAGGTCAGGAGCCCAGCTCTCCAGGGGGCT...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCAGCCGTGATGCCCACTaGCTGTTGTCCCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSSRDAH*LLSRAC
Trigger: ACAAGCCCGGGACAACAGCCAGTGGGCATCACGGCT...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCAGGGGCAGCGGCTGCGTaGCTGTGCCGGAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPGAAAA*LCRRLP
Trigger: GGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCC...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCGGGAGCCCCCTCCCTaGACATCTTGGCGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHREPPP*TSWRGP
Trigger: AGGACCTCGCCAAGATGTCCAGGGAGGGGGCTCCCG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR TCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGATCCAGAGAGAGGATaGGGCGCGGGTTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTDPERG*GAGWPC
Trigger: ACACGGCCAACCCGCGCCTCATCCTCTCTCTGGATC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGTACTGGCCGCCGTTaGGCTGCAGGGCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCSTGRR*AAGPRR
Trigger: GCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACT...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCGCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDRAPGS*RGRCRG
Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGCG...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCGCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHRAPGS*RGRCRG
Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGCG...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCTCTGGACCAGCCAGACTaGAACACAAGCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GWPRPRPAPWQQRTAGLALDQPD*NTSSGS
Trigger: GCTGCCGGAGCTTGTGTTTCAGTCTGGCTGGTCCAG...AGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR GCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCCAGGAAAGCCCTCAGTaGCTGGAACTCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPQESPQ*LELCPH
Trigger: GTGGGGGCAGAGTTCCAGGCACTGAGGGCTTTCCTG...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCAGGAAAGCCCTCAGTaGCTGGAACTCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASQESPQ*LELCPH
Trigger: GTGGGGGCAGAGTTCCAGGCACTGAGGGCTTTCCTG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHSSRPS*STRKAL
Trigger: GAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCT...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSARFSF*FCATSR
Trigger: CCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGC...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGTGGGGCCAGGCACATTaGTACACCTGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QQGSGARRADPRRTRHLWWGQAH*YTCSAC
Trigger: GCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCA...CCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGAGCTCCCCAGCAGTaGCCCTCAAGGCCAGATTCG +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTGAPQQ*PSRPDS
Trigger: CGAATCTGGCCTTGAGGGGCACTGCTGGGGAGCTCC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGCAGGGAGTAGCCCACTaGCACCCTTCCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGQGVAH*HPSRSP
Trigger: TGGGCTTCTGGAAGGGTGGCAGTGGGCTACTCCCTG...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCTTCTCCTGCTCCGCTaGCATCTGTTTCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRLLLLR*HLFRAL
Trigger: CAGGGCTCGAAACAGATGGCAGCGGAGCAGGAGAAG...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422067.2
CDS-3UTR CCA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCCCGCGCACCCAGATCTaGTCGCGCCTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RESGVCESTCWLSHWSGCPRTQI*SRLGGH
Trigger: GTGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGG...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAACTCCAAGAGCTCCTTaGCCTCCTGCACCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPATPRAP*PPAPPR
Trigger: ACGAGGCGGTGCAGGAGGCCAAGGAGCTCTTGGAGT...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCCTGAGCTTGGACAGCTaGGTGATCTCAACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGLSLDS*VISTPS
Trigger: GCTCGGGGTTGAGATCACCCAGCTGTCCAAGCTCAG...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGCTGTCTCCTGGATCTaGCTGCTGAGCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRAVSWI*LLSLDS
Trigger: GCTGTCCAAGCTCAGCAGCCAGATCCAGGAGACAGC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGTGGTTGGGCAGGTCCTaGGCCCGCTCGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWWLGRS*ARSPRR
Trigger: GCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCA...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTGTCACGGCCCAGTACTaGCCGCCGTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GNTLRSPKPLFPCSVGHSVTAQY*PPLSCR
Trigger: CCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGAC...ACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTGGGAACACGCGCTCCTaGAAGTTGACGCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASGNTRS*KLTRKV
Trigger: CACCTTCCGCGTCAACTTCCAGGAGCGCGTGTTCCC...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCGCAAGTAGGTGCCCGTaGAGCAAACAGAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPASRCP*SKQRKA
Trigger: CGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGC...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGCSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATGTTCCCCTGCTCGGTTaGCCACAGTCACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHVPLLG*PQSLSC
Trigger: GCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAAC...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACGTTCCCCTGCTCGGTTaGCCACAGTCACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDVPLLG*PQSLSC
Trigger: GCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAAC...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCCCAGACCTGCCCCCTaGCAACAGAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASPRPAP*QQRTAG
Trigger: TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGDNKRG*PRPRPA
Trigger: GGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATC...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGGGGCTGAGAAGGCCTTaGCACCAGGGTGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARGLRRP*HQGALL
Trigger: CAGCAGAGCACCCTGGTGCCAAGGCCTTCTCAGCCC...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCCAGCAAGGAGAGACTaGGGACTGCCGCCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GNTLRSPKPLFPCSVGHSPARRD*GLPPEP
Trigger: AGGCTCGGGCGGCAGTCCCCAGTCTCTCCTTGCTGG...ACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCCGTCCCTGTCACTGCTaGAGGATCGGAGACACACCC +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPRPCHC*RIGDTP
Trigger: GGGTGTGTCTCCGATCCTCCAGCAGTGACAGGGACG...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR TCA 90 bp GGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCAGATCCAGAGAGAGGATaGGGCGCGGGTTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GREHPQESKAPVPLLGWPDPERG*GAGWPC
Trigger: ACACGGCCAACCCGCGCCTCATCCTCTCTCTGGATC...TGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVTGARS*GATARG
Trigger: GCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGT...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKTGARS*GATARG
Trigger: GCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGT...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCTCCTCCCTGAGTAGATaGCCTGTCAGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSSSLSR*PVRSAG
Trigger: TCCAGCTGACCTGACAGGTCATCTACTCAGGGAGGA...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCTCCTCCCTGAGTAGATaGCCTGTCAGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGSSLSR*PVRSAG
Trigger: TCCAGCTGACCTGACAGGTCATCTACTCAGGGAGGA...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCACAGGGCTCCTCCCTaGGTAGATGACCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASHRAPP*VDDLSG
Trigger: ACCTGACAGGTCATCTACTCAGGGAGGAGCCCTGTG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCAAAGTCCGATGCCAGTaGCCAGAGGTAGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSKVRCQ*PEVAAH
Trigger: GTGTGCTGCTACCTCTGGTCACTGGCATCGGACTTT...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR GCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTCCCAGCAGCGCCCTATaGAGGCGCGGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGPSSAL*RRGRSC
Trigger: ACAGCTTCTGCCGCGCCTGCATAGGGCGCTGCTGGG...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR GCA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCGCGGGCTCGCGGCACTaGGGACAGGGCAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RESGVCESTCWLSHWSGCAGSRH*GQGSGK
Trigger: CTTCCCACTGCCCTGTCCGCAGTGCCGCGAGCCCGC...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR GCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCTCATTCTGCTTCTGTaGCACCTCCCGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSLILLL*HLPGQF
Trigger: GAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAG...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATTGGGGCCAGGCACATTaGTACACCTGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHWGQAH*YTCSAC
Trigger: GCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCA...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCGGAGCTCCCCAGCAGTaGCCCTCAAGGCCAGATTCG +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPGAPQQ*PSRPDS
Trigger: CGAATCTGGCCTTGAGGGGCACTGCTGGGGAGCTCC...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCAGCCCAGGCCCAGACCTaGCCCCTGGCAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPAQAQT*PLATEN
Trigger: GTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGC...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAAGCCCTCAGTGCCTaGAACTCTGCCCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPKALSA*NSAPTF
Trigger: GAAGGTGGGGGCAGAGTTCCAGGCACTGAGGGCTTT...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGGCGACCGCTCGGGGCTaGTCACGGCCCAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWATARG*SRPSTG
Trigger: GCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGC...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGGTTCCCCTGCTCGGTTaGCCACAGTCACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRVPLLG*PQSLSC
Trigger: GCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAAC...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPADNKRG*PRPRPA
Trigger: GGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATC...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASDNKRG*PRPRPA
Trigger: GGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATC...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTATGCCCTCCAGGGCATaGGCTGAGAAGGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTMPSRA*AEKALA
Trigger: TGCCAAGGCCTTCTCAGCCCATGCCCTGGAGGGCAT...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGGGGGCAGCGGCTGCGTaGCTGTGCCGGAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWGAAAA*LCRRLP
Trigger: GGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCC...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCTCAAGACCCTCAGCCTaGACTCCAAGAGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGSRPSA*TPRALR
Trigger: CCTCAGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGA...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR TCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCCCTGGCAGTAGAGCTTaGAGGGTTCGCCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGPGSRA*RVRHAA
Trigger: GGCAGCATGGCGAACCCTTCAAGCTCTACTGCCAGG...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR TCA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCATGTCGGGATCCAAGGTaGGCTCCACTTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QDGPGISGEATSPPTGSPCRDPR*APLSPL
Trigger: AAGAGGAGAAAGTGGAGCTCACCTTGGATCCCGACA...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCGATCCAGAGAGAGGATaGGGCGCGGGTTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPDPERG*GAGWPC
Trigger: ACACGGCCAACCCGCGCCTCATCCTCTCTCTGGATC...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCCGCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGRAPGS*RGRCRG
Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGCG...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCCCGGCCTCCACCTCCTaGAGGCTCTGGCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPPASTS*RLWPNP
Trigger: TGGATTTGGCCAGAGCCTTCAGGAGGTGGAGGCCGG...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCTTCCTCCCTGAGTAGATaGCCTGTCAGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GWPRPRPAPWQQRTAGLASSLSR*PVRSAG
Trigger: TCCAGCTGACCTGACAGGTCATCTACTCAGGGAGGA...AGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTCCTCCCTGAGTAGATaGCCTGTCAGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGSSLSR*PVRSAG
Trigger: TCCAGCTGACCTGACAGGTCATCTACTCAGGGAGGA...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTGGAGTCAGGGGTTTGTaGGAGCACGTGTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASGVRGL*EHVLVV
Trigger: GACAACCAACACGTGCTCTCACAAACCCCTGACTCC...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCTTCTCCTGCTCCGCTaGCATCTGTTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDLLLLR*HLFQQL
Trigger: GAGCTGCTGAAACAGATGGCAGCGGAGCAGGAGAAG...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCAGGAAAGCCCTCAGTaGCTGGAACTCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GNTLRSPKPLFPCSVGHSQESPQ*LELCPH
Trigger: GTGGGGGCAGAGTTCCAGGCACTGAGGGCTTTCCTG...ACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCATTCTGCTTCTGTaGCACCTCCCGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHLILLL*HLPGQF
Trigger: GAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAG...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCTGGGGCCAGGCACATTaGTACACCTGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RKGTPSGVQSPCSPARLAWGQAH*YTCSAC
Trigger: GCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCA...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCGGAGCTCCCCAGCAGTaGCCCTCAAGGCCAGATTCG +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPGAPQQ*PSRPDS
Trigger: CGAATCTGGCCTTGAGGGGCACTGCTGGGGAGCTCC...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCTCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: GWPRPRPAPWQQRTAGLAPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...AGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QQGSGARRADPRRTRHLWPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...CCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGAGTGGGGGCAGCGGCTaGGTGGCTGTGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWSGGSG*VAVPET
Trigger: AGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACT...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR GCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGGCTACAGGTTACACTaGGAGGTGACTCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRGYRLH*EVTLKV
Trigger: GACCTTCAGAGTCACCTCGCAGTGTAACCTGTAGCC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp AAATCGATTCTGCGGTTCCATAGCACACACTCCAACACCACACACACCGAGCCCAGCGCCGCAGGAGCGTaGCCACTGCCGCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KSILRFHSTHSNTTHTEPSAAGA*PLPPAA
Trigger: GGCAGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCT...GGGCTCGGTGTGTGTGGTGTTGGAGTGTGTGCTATGGAACCGCAGAATCGATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGATCTCAACCCCGAGCTaGGCCAGGTTCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGISTPS*ARFSFC
Trigger: GCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGAT...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATATCTCAACCCCGAGCTaGGCCAGGTTCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHISTPS*ARFSFC
Trigger: GCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGAT...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGGCTGTCTCCTGGATCTaGCTGCTGAGCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRAVSWI*LLSLDS
Trigger: GCTGTCCAAGCTCAGCAGCCAGATCCAGGAGACAGC...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAAGACTGTGGTTGGCTTaGGGCCAGGCACATTGCTAC +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPARLWLA*GQAHCY
Trigger: GTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCT...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCAGGGAACACGCGCTCCTaGAAGTTGACGCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GREHPQESKAPVPLLGWPGNTRS*KLTRKV
Trigger: CACCTTCCGCGTCAACTTCCAGGAGCGCGTGTTCCC...TGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCGGGAACACGCGCTCCTaGAAGTTGACGCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPGNTRS*KLTRKV
Trigger: CACCTTCCGCGTCAACTTCCAGGAGCGCGTGTTCCC...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGCSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTTGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSCSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGATGTAGCAGGCTCTCTTaGGCAGCAGGGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGCSRLS*AAGVRS
Trigger: GCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACA...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAGCCCCCTGGAGAGCTaGGCTCCTGACCTCACCGGC +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMISPLES*APDLTG
Trigger: GCCGGTGAGGTCAGGAGCCCAGCTCTCCAGGGGGCT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGCTCTCAAGGCAGAGCTaGCAGCTGTCCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARLSRQS*QLSRRQ
Trigger: CTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAG...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGAAGCCGTGATGCCCACTaGCTGTTGTCCCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGSRDAH*LLSRAC
Trigger: ACAAGCCCGGGACAACAGCCAGTGGGCATCACGGCT...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGAGGGTGCTCTGCTGTTaGCATTTTCCTGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRRVLCC*HFPESV
Trigger: GACGGACTCAGGAAAATGCCAACAGCAGAGCACCCT...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCATGCCCTCCAGGGCATaGGCTGAGAAGGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGMPSRA*AEKALA
Trigger: TGCCAAGGCCTTCTCAGCCCATGCCCTGGAGGGCAT...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGAATCGACAGCGTTaGCACAGTCAGACGGCTCTA +
Preference number: 4 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRQNRQR*HSQTAL
Trigger: TAGAGCCGTCTGACTGTGCCAACGCTGTCGATTCTG...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTAGGAAGCCCCGTGGCTaGGAGAGTTGGAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSRKPRG*ESWSRM
Trigger: CATCCTGCTCCAACTCTCCCAGCCACGGGGCTTCCT...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGTCAAGACCCTCAGCCTaGACTCCAAGAGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRSRPSA*TPRAPS
Trigger: CGAGGGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGA...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422067.2
CDS-3UTR TCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCATCAAGGTCAGGCTTTTaGGCTGTCTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPASRSGF*AVSWIW
Trigger: CCAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGA...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCTCAAGGTCAGGCTTTTaGGCTGTCTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPSRSGF*AVSWIW
Trigger: CCAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGA...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACTGTCGGGATCCAAGGTaGGCTCCACTTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDCRDPR*APLSPL
Trigger: AAGAGGAGAAAGTGGAGCTCACCTTGGATCCCGACA...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCACGCCCTCCTCGGGAGTaGAGGGCGTCAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSQGFVRARVGCRIGQDARPPRE*RASGPF
Trigger: GAAAGGGCCTGACGCCCTTCACTCCCGAGGAGGGCG...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGACGAGGTGGGGACTTTaGGCAGAGCCCGCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWTRWGL*AEPASG
Trigger: CCCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGT...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR GCA 90 bp AAATCGATTCTGCGGTTCCATAGCACACACTCCAACACCACACACACCGAGCCCCACGTCGCCTCGCCCTaGAGCTCTGCCGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KSILRFHSTHSNTTHTEPHVASP*SSAASA
Trigger: AGCGCTGGCGGCAGAGCTGCAGGGCGAGGCGACGTG...GGGCTCGGTGTGTGTGGTGTTGGAGTGTGTGCTATGGAACCGCAGAATCGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAACAGGAGCGTGGCCACTaGCGCCAGCTGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKQERGH*RQLPVG
Trigger: CCCAACCGGCAGCTGGCGGCAGTGGCCACGCTCCTG...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR GCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGCCCCCACCTTCTCCTaGTCCGCTGCCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQAPTFS*SAAICF
Trigger: GAAACAGATGGCAGCGGAGCAGGAGAAGGTGGGGGC...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGCCACAGTCACTCTCCTaGCTCGGGGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARPQSLS*LGVVSV
Trigger: TACAGACACAACCCCGAGGCAGGAGAGTGACTGTGG...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGAAGCCCCTGTTCCCCTaGTCGGTTGGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQKPLFP*SVGHSH
Trigger: GTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTT...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCTCGCATTGGTCAGGATaGACCCATCACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: RRADPRRTRHLWGGDIPSSHWSG*THHSVS
Trigger: GGATACAGAGTGATGGGTGCATCCTGACCAATGCGA...GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCACCAGGGTGCTCTaGTGTTGGCATTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTGTRVL*CWHFPE
Trigger: CTCAGGAAAATGCCAACAGCAGAGCACCCTGGTGCC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGCCTTGGCACCAGGGTaGTCTGCTGTTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTALAPG*SAVGIF
Trigger: GAAAATGCCAACAGCAGAGCACCCTGGTGCCAAGGC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCCCGCGGGCAGAGAGCTaGGGAGACGCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLPRAES*GDADQA
Trigger: AGCCTGGTCTGCGTCTCCGCAGCTCTCTGCCCGCGG...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAACGCCTGGGCGGCCACTaGACCTCACAGGACGCGGAG +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKRLGGH*TSQDAE
Trigger: CTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCG...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTAGCGCCGCAGGAGCGTaGCCACTGCCGCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVSAAGA*PLPPAA
Trigger: GGCAGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCT...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTAAAGCCCTCAGTGCCTaGAACTCTGCCCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSKALSA*NSAPTF
Trigger: GAAGGTGGGGGCAGAGTTCCAGGCACTGAGGGCTTT...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGAAAAGCCCTCAGTGCCTaGAACTCTGCCCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGKALSA*NSAPTF
Trigger: GAAGGTGGGGGCAGAGTTCCAGGCACTGAGGGCTTT...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTCTGAGCTTGGACAGCTaGGTGATCTCAACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSLSLDS*VISTPS
Trigger: GCTCGGGGTTGAGATCACCCAGCTGTCCAAGCTCAG...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCGTGCTTTTGAATTCCTaGAGAAAGTCAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPVLLNS*RKSRSG
Trigger: GCCTGACCTTGACTTTCTCCAGGAATTCAAAAGCAC...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGAACACGCGCTCCTaGAAGTTGACGCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQGNTRS*KLTRKV
Trigger: CACCTTCCGCGTCAACTTCCAGGAGCGCGTGTTCCC...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGCCCAGACCTGCCCCCTaGCAACAGAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQPRPAP*QQRTAG
Trigger: TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGG...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATACCTGTCAGGTCAGCTaGATCCAGAGGTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHTCQVS*IQRSHN
Trigger: GTTGTGGGACCTCTGGATCCAGCTGACCTGACAGGT...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGCCGGCTAAGGAGTGCTaGAGAGCCGTGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQPAKEC*RAVMPT
Trigger: AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGG...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGAATCGACAGCGTTaGCACAGTCAGACGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDQNRQR*HSQTAL
Trigger: TAGAGCCGTCTGACTGTGCCAACGCTGTCGATTCTG...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTCGTGGCTGGGAGAGTTaGAGCAGGATGGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCRGWES*SRMGQQ
Trigger: TTGCTGGCCCATCCTGCTCCAACTCTCCCAGCCACG...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR TCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAACGCCCTCCTCGGGAGTaGAGGGCGTCAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKRPPRE*RASGPF
Trigger: GAAAGGGCCTGACGCCCTTCACTCCCGAGGAGGGCG...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGGAGAGCTGGGCTCCTaGCCTCACCGGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKGELGS*PHRPPP
Trigger: AGGTGGAGGCCGGTGAGGTCAGGAGCCCAGCTCTCC...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCCAGCAGGACTGGCTTTaGCATTGTTTTAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPQQDWL*HCFREP
Trigger: TGGCTCCCTAAAACAATGTCAAAGCCAGTCCTGCTG...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTCACAGGGCTCCTCCCTaGGTAGATGACCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGHRAPP*VDDLSG
Trigger: ACCTGACAGGTCATCTACTCAGGGAGGAGCCCTGTG...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGAGGAGTCAGGGGTTTGTaGGAGCACGTGTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGGVRGL*EHVLVV
Trigger: GACAACCAACACGTGCTCTCACAAACCCCTGACTCC...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCCTGTTGGCATTTTCCTaGGTCCGTCAGGAGCATATT +
Preference number: 4 (lower is better)
Translates to: GSGARRADPRRTRHLWGGLLAFS*VRQEHI
Trigger: AATATGCTCCTGACGGACTCAGGAAAATGCCAACAG...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCATTCCCAGGGGAGCGCTaGGCAGGGAGTAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRAFPGER*AGSSPL
Trigger: CAGTGGGCTACTCCCTGCTCAGCGCTCCCCTGGGAA...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCAAGGAACGAAGTaGGAATATGCGGCATGCAAG +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHPQGTK*EYAACK
Trigger: CTTGCATGCCGCATATTCTCACTTCGTTCCTTGGGG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR GCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMISSRPS*STRKAL
Trigger: GAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPSSRPS*STRKAL
Trigger: GAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCT...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCTCATTCTGCTTCTGTaGCACCTCCCGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: GNTLRSPKPLFPCSVGHSLILLL*HLPGQF
Trigger: GAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAG...ACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTCTCATTCTGCTTCTGTaGCACCTCCCGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSLILLL*HLPGQF
Trigger: GAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAG...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGARFSF*FCATSR
Trigger: CCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGC...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQARFSF*FCATSR
Trigger: CCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGC...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCACGCACGCGCGACAGGTaGCCGCAGCTGAGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: LSPSGAYLCSVCCLELAARTRDR*PQLRGD
Trigger: GTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCG...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCAGCCCAGGCCCAGACCTaGCCCCTGGCAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRAAQAQT*PLATEN
Trigger: GTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGC...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCATTCCCCAAAAGCATCTaGTGGACCAGCCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPAFPKSI*WTSQTE
Trigger: TTCAGTCTGGCTGGTCCAGCAGATGCTTTTGGGGAA...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR GCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGCAAGGTGTCCTACAATaGCCCCACCTTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRQGVLQ*PHLSFS
Trigger: GCTGAAGGAAAGGTGGGGGCATTGTAGGACACCTTG...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp CAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGTCTCCTTCTTTTCCGTaGACCGGAACACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: QQGSGARRADPRRTRHLWSPSFP*TGTPHS
Trigger: ACTGTGAGGTGTTCCGGTCCACGGAAAAGAAGGAGA...CCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGAAAGCCCTCAGTGCCTaGAACTCTGCCCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQKALSA*NSAPTF
Trigger: GAAGGTGGGGGCAGAGTTCCAGGCACTGAGGGCTTT...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGCTGAGCTTGGACAGCTaGGTGATCTCAACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQLSLDS*VISTPS
Trigger: GCTCGGGGTTGAGATCACCCAGCTGTCCAAGCTCAG...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTGCTGTCTCCTGGATCTaGCTGCTGAGCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCAVSWI*LLSLDS
Trigger: GCTGTCCAAGCTCAGCAGCCAGATCCAGGAGACAGC...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTGCTGTCTCCTGGATCTaGCTGCTGAGCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGAVSWI*LLSLDS
Trigger: GCTGTCCAAGCTCAGCAGCCAGATCCAGGAGACAGC...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRRRDCG*LGARHI
Trigger: AATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCT...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCACCAGGACGCGGGTGTTaGTGTCGAAGCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRAPGRGC*CRSGRG
Trigger: ACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGG...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGCAAGTAGGTGCCCGTaGAGCAAACAGAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTASRCP*SKQRKA
Trigger: CGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGGGGCTGAGAAGGCCTTaGCACCAGGGTGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWGLRRP*HQGALL
Trigger: CAGCAGAGCACCCTGGTGCCAAGGCCTTCTCAGCCC...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp GGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCATCAAGGTCAGGCTTTTaGGCTGTCTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GREHPQESKAPVPLLGWPSRSGF*AVSWIW
Trigger: CCAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGA...TGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATACGCGCTCCTGGAAGTTaGCGCGGAAGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIRAPGS*RGRCRG
Trigger: ACCTCTACACCTTCCGCGTCAACTTCCAGGAGCGCG...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCACCTTCTCCTaGTCCGCTGCCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPAPTFS*SAAICF
Trigger: GAAACAGATGGCAGCGGAGCAGGAGAAGGTGGGGGC...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCGGAGCTCCCCAGCAGTaGCCCTCAAGGCCAGATTCG +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLGAPQQ*PSRPDS
Trigger: CGAATCTGGCCTTGAGGGGCACTGCTGGGGAGCTCC...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTTGCTCTTTTCTCCCCTaGCACAGATGCACCCACACA +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSCSFLP*HRCTHT
Trigger: TGTGTGGGTGCATCTGTGGCAGGGGAGAAAAGAGCA...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR GCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTCTTCTCCTGCTCCGCTaGCATCTGTTTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCLLLLR*HLFLSQ
Trigger: CTGGGACAGAAACAGATGGCAGCGGAGCAGGAGAAG...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTTCAAGACCCTCAGCCTaGACTCCAAGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCSRPSA*TPRAPW
Trigger: CCAAGGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGA...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CCA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCAAGACTGTGGTTGGCTTaGGGCCAGGCACATTGCTAC +
Preference number: 4 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPRLWLA*GQAHCY
Trigger: GTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCT...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCCAGGACGCGGGTGTTaGTGTCGAAGCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVPGRGC*CRSGRG
Trigger: ACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGTCACGGCCCAGTACTaGCCGCCGTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKVTAQY*PPLSCR
Trigger: CCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGAC...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCGGCTAAGGAGTGCTaGAGAGCCGTGATGCCCACT +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWPAKEC*RAVMPT
Trigger: AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGG...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTTTTGTACTTTGGCACTaGAAAGTGCGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TWLAQAQTCPLATENSRTFVLWH*KVRESG
Trigger: CCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAA...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCGCAGCGTTTGTACTTTaGCACTGGAAAGTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGAAFVL*HWKVRE
Trigger: CTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGC...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCAGCTACCCAGAAGCTaGAGAACAAGTAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHQLPRS*RTSRQG
Trigger: CCCTTGTCTACTTGTTCTCCAGCTTCTGGGTAGCTG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGCAGCTACCCAGAAGCTaGAGAACAAGTAGACAAGGG +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARQLPRS*RTSRQG
Trigger: CCCTTGTCTACTTGTTCTCCAGCTTCTGGGTAGCTG...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTGGAGAGCCGTGATGCCCACTCCTCCCTGGACATCTTaGCGAGGTCCTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: PITLYPPAKECWRAVMPTPPWTS*RGPLTQ
Trigger: CTGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGG...AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGAGTTGGAGCAGGATaGGCCAGCAAGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPRVGAG*ASKERL
Trigger: CAGTCTCTCCTTGCTGGCCCATCCTGCTCCAACTCT...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR TCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGTCAAGGTCAGGCTTTTaGGCTGTCTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQSRSGF*AVSWIW
Trigger: CCAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGA...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACTGCTCAGCGTGCTTTTaGATTCCTGGAGAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDCSACF*IPGESQ
Trigger: TTGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCA...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCCCCGAAGGTCCTCTTTaGACTTCTTCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGPEGPL*TSSASL
Trigger: AAGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGG...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGTCGGGATCCAAGGTaGGCTCCACTTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGCRDPR*APLSPL
Trigger: AAGAGGAGAAAGTGGAGCTCACCTTGGATCCCGACA...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTAACTGGAGGATCACTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGNWRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAGTGATCCTCCAGTT...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWARFSF*FCATSR
Trigger: CCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGC...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGAAGATTCGCAAGTAGGTaGCCGTGGAGCAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGRFASR*PWSKQR
Trigger: TCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCT...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTTTGGCACTGGAAAGTaGGGGAGTCAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGFGTGK*GSQGFV
Trigger: CACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAA...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATTTGGCACTGGAAAGTaGGGGAGTCAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPFGTGK*GSQGFV
Trigger: CACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAA...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATAAGTTCCAGAAGCTTTaGTCTCCTTATCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGQQGSGARRADPRRTRHKFQKL*SPYPSS
Trigger: GCTGCTTGGATAAGGAGAGCAAAGCTTCTGGAACTT...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCCAGGGAGTAGCCCACTaGCACCCTTCCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLQGVAH*HPSRSP
Trigger: TGGGCTTCTGGAAGGGTGGCAGTGGGCTACTCCCTG...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTTCTCCTTCTTTTCCGTaGACCGGAACACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GNTLRSPKPLFPCSVGHSSPSFP*TGTPHS
Trigger: ACTGTGAGGTGTTCCGGTCCACGGAAAAGAAGGAGA...ACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTCGGACCAGGCATCTCTaGGGAGGCGACATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVRTRHL*GGDIPS
Trigger: GGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCG...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAGATAACAAACGTGGTTaGCCCAGGCCCAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIDNKRG*PRPRPA
Trigger: GGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATC...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTGGAGAGCCGTGATGCCCACTACCTGTCAGGTCAGCTaGATCCAGAGGTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: PITLYPPAKECWRAVMPTTCQVS*IQRSHN
Trigger: GTTGTGGGACCTCTGGATCCAGCTGACCTGACAGGT...AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCTTTGTACTTTGGCACTaGAAAGTGCGGGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RKGTPSGVQSPCSPARLAFVLWH*KVRESG
Trigger: CCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAA...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTCCTCCCTGGACATCTTaGCGAGGTCCTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPPPWTS*RGPLTQ
Trigger: CTGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGG...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCCCCAAAAGCATCTGCTaGACCAGCCAGACTGAAACA +
Preference number: 4 (lower is better)
Translates to: RKGTPSGVQSPCSPARLAPKSIC*TSQTET
Trigger: TGTTTCAGTCTGGCTGGTCCAGCAGATGCTTTTGGG...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR TCA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCACCCGAAGGTCCTCTTTaGACTTCTTCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPPEGPL*TSSASL
Trigger: AAGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGG...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCCCCGAAGGTCCTCTTTaGACTTCTTCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPPEGPL*TSSASL
Trigger: AAGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGG...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGCAGCAGGACTGGCTTTaGCATTGTTTTAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQQQDWL*HCFREP
Trigger: TGGCTCCCTAAAACAATGTCAAAGCCAGTCCTGCTG...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp TGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTCAGCAGGACTGGCTTTaGCATTGTTTTAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CSPARLATVTLLPRGCVCQQDWL*HCFREP
Trigger: TGGCTCCCTAAAACAATGTCAAAGCCAGTCCTGCTG...ACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCCACAGGGCTCCTCCCTaGGTAGATGACCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLHRAPP*VDDLSG
Trigger: ACCTGACAGGTCATCTACTCAGGGAGGAGCCCTGTG...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTAGATTCGCAAGTAGGTaGCCGTGGAGCAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: TSGREHPQESKAPVPLLGRFASR*PWSKQR
Trigger: TCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCT...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCTTCGTCCCTGTCACTaGTGGAGGATCGGAGACACA +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWLRPCH*WRIGDT
Trigger: TGTGTCTCCGATCCTCCAGCAGTGACAGGGACGAAG...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCATCTCAACCCCGAGCTaGGCCAGGTTCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: RESGVCESTCWLSHWSGCISTPS*ARFSFC
Trigger: GCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGAT...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCACTGAGCTTGGACAGCTaGGTGATCTCAACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSQGFVRARVGCRIGQDALSLDS*VISTPS
Trigger: GCTCGGGGTTGAGATCACCCAGCTGTCCAAGCTCAG...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGGTGCTTTTGAATTCCTaGAGAAAGTCAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARVLLNS*RKSRSG
Trigger: GCCTGACCTTGACTTTCTCCAGGAATTCAAAAGCAC...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp TGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTACCTGTCAGGTCAGCTaGATCCAGAGGTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: CPEGSSHDNKRGWPRPRPTCQVS*IQRSHN
Trigger: GTTGTGGGACCTCTGGATCCAGCTGACCTGACAGGT...AGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCACAGGGCTCCTCCCTaGGTAGATGACCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVHRAPP*VDDLSG
Trigger: ACCTGACAGGTCATCTACTCAGGGAGGAGCCCTGTG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGCTGTTGGCATTTTCCTaGGTCCGTCAGGAGCATATT +
Preference number: 4 (lower is better)
Translates to: QSLSCLGVVSVAGSLGQQLLAFS*VRQEHI
Trigger: AATATGCTCCTGACGGACTCAGGAAAATGCCAACAG...CTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp CTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGTTGGAGAGGGACTTaGACATGGAGACATAACATT +
Preference number: 4 (lower is better)
Translates to: LGVVSVAGSLGQQGSGARSWRGT*TWRHNI
Trigger: AATGTTATGTCTCCATGTTCAAGTCCCTCTCCAACT...CCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR GCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCACTTCTCCTGCTCCGCTaGCATCTGTTTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRALLLLR*HLFQQL
Trigger: GAGCTGCTGAAACAGATGGCAGCGGAGCAGGAGAAG...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCGGCACCAGGGTGCTCTaGTGTTGGCATTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLGTRVL*CWHFPE
Trigger: CTCAGGAAAATGCCAACAGCAGAGCACCCTGGTGCC...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATATCACCAGCAGCTCCTTaGTCTCCTTCTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMISPAAP*SPSFPW
Trigger: CCACGGAAAAGAAGGAGAGCAAGGAGCTGCTGGTGA...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422067.2
CDS-3UTR GCA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCATCAGATGCAGACTCATaGCCTGATCTCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: RPKTDQASLGRRHPLPPASDADS*PDLLIF
Trigger: AAAAATCAAGAGATCAGGGCATGAGTCTGCATCTGA...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCAAGACTGTGGTTGGCTTaGGGCCAGGCACATTGCTAC +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRARLWLA*GQAHCY
Trigger: GTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCT...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIRRDCG*LGARHI
Trigger: AATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAGCAAGTAGGTGCCCGTaGAGCAAACAGAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIASRCP*SKQRKA
Trigger: CGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGC...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAGGGTGCTCTGCTGTTaGCATTTTCCTGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIRVLCC*HFPESV
Trigger: GACGGACTCAGGAAAATGCCAACAGCAGAGCACCCT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
3UTR CAA 72 bp GTGCGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTaGTCGCATTGGTCAGGATGCACCCATCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: VRESGVCESTCW*SHWSGCTHHSV
Trigger: TACAGAGTGATGGGTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR TCA 90 bp GGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCTGCTCAGCGTGCTTTTaGATTCCTGGAGAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GSCPEGSSHDNKRGWPRPCSACF*IPGESQ
Trigger: TTGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCA...GGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCTCGCATTGGTCAGGATaGACCCATCACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: RESGVCESTCWLSHWSGCSHWSG*THHSVS
Trigger: GGATACAGAGTGATGGGTGCATCCTGACCAATGCGA...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCACACCTACGCACGCAGTaGGTGCTCTATTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRAHLRTQ*VLYCQC
Trigger: ACACTGACAATAGAGCACGCACTGCGTGCGTAGGTG...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp TTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCAGGCCCTACGCCTGGGCGGCCACTaGACCTCACAGGACGCGGAG +
Preference number: 4 (lower is better)
Translates to: FLCRNSNVFHYKMLPQALRLGGH*TSQDAE
Trigger: CTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCG...TAGGGCCTGCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAATCTCAACCCCGAGCTaGGCCAGGTTCTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKISTPS*ARFSFC
Trigger: GCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGAT...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAACCTGTCAGGTCAGCTaGATCCAGAGGTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKTCQVS*IQRSHN
Trigger: GTTGTGGGACCTCTGGATCCAGCTGACCTGACAGGT...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATATGTGAGAGCACGTGTTaGTTGTCGCATTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMICESTC*LSHWSG
Trigger: TCCTGACCAATGCGACAACCAACACGTGCTCTCACA...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp TTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCAGGCCCTAGGGCGGGGCTGCCACTaGGCAGGCAGAGACTCGAGC +
Preference number: 4 (lower is better)
Translates to: FLCRNSNVFHYKMLPQALGRGCH*AGRDSS
Trigger: GCTCGAGTCTCTGCCTGCCCAGTGGCAGCCCCGCCC...TAGGGCCTGCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR TCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCAGCCGCGGGCAGGCTaGAGCGCCGCAGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPQPRAG*SAAGAW
Trigger: CCACGCTCCTGCGGCGCTTCAGCCTGCCCGCGGCTG...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR TCA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGTTAAGACAAAGGTCTTaGGAGAAACATTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRLRQRS*EKHSRL
Trigger: AAGTCTGGAATGTTTCTCTCAAGACCTTTGTCTTAA...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAATGTCGGGATCCAAGGTaGGCTCCACTTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKCRDPR*APLSPL
Trigger: AAGAGGAGAAAGTGGAGCTCACCTTGGATCCCGACA...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR GCA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCAAGATTCGCAAGTAGGTaGCCGTGGAGCAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: GSQGFVRARVGCRIGQDARFASR*PWSKQR
Trigger: TCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCT...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTGCCTTGGCACCAGGGTaGTCTGCTGTTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVALAPG*SAVGIF
Trigger: GAAAATGCCAACAGCAGAGCACCCTGGTGCCAAGGC...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CCCATCACTCTGTATCCTCCGGCTAAGGAGTGCTGGAGAGCCGTGATGCCCACTGTGCTTTTGAATTCCTaGAGAAAGTCAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PITLYPPAKECWRAVMPTVLLNS*RKSRSG
Trigger: GCCTGACCTTGACTTTCTCCAGGAATTCAAAAGCAC...AGTGGGCATCACGGCTCTCCAGCACTCCTTAGCCGGAGGATACAGAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVRRDCG*LGARHI
Trigger: AATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCT...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGCAAGTAGGTGCCCGTaGAGCAAACAGAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVASRCP*SKQRKA
Trigger: CGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGC...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CCA 90 bp AGGACTGGCTTTGACATTGTTTTAGGGAGCCAGGCACCCTTCCCAGTCAGGGCATGTTGGTTGTCGCATTaGTCAGGATGCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RTGFDIVLGSQAPFPVRACWLSH*SGCTHH
Trigger: GTGATGGGTGCATCCTGACCAATGCGACAACCAACA...TGCCCTGACTGGGAAGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCATGTTGGTTGTCGCATTaGTCAGGATGCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: GSQGFVRARVGCRIGQDACWLSH*SGCTHH
Trigger: GTGATGGGTGCATCCTGACCAATGCGACAACCAACA...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCAGCGTTTGTACTTTaGCACTGGAAAGTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKAAFVL*HWKVRE
Trigger: CTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGC...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCGCGCCGAGGGCCCACTaGGAGAGGAAGGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSAPRAH*ERKGGA
Trigger: AGCCCCGCCCTTCCTCTCCCAGTGGGCCCTCGGCGC...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR TCA 90 bp GGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTGGTGCTCAGCGTGCTTTTaGATTCCTGGAGAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GRAGSCPEGSSHDNKRGWCSACF*IPGESQ
Trigger: TTGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCA...CCAACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCTTAAGACAAAGGTCTTaGGAGAAACATTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: RKGTPSGVQSPCSPARLALRQRS*EKHSRL
Trigger: AAGTCTGGAATGTTTCTCTCAAGACCTTTGTCTTAA...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTTAAGACAAAGGTCTTaGGAGAAACATTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPLRQRS*EKHSRL
Trigger: AAGTCTGGAATGTTTCTCTCAAGACCTTTGTCTTAA...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTTTAAGACAAAGGTCTTaGGAGAAACATTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: PVPLLGWPQSLSCLGVVSLRQRS*EKHSRL
Trigger: AAGTCTGGAATGTTTCTCTCAAGACCTTTGTCTTAA...AGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCCCGAAGGTCCTCTTTaGACTTCTTCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: KAELAAVQKAAAMITNVVPEGPL*TSSASL
Trigger: AAGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTAACTGGAGGATCACTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVNWRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAGTGATCCTCCAGTT...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp TATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCGTCCCACAGCCGCCATaGGCGCTCTCCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: YPCFSAEIVMCSITRCFRVPQPP*ALSAHP
Trigger: TGGGTGCGCGGAGAGCGCGCATGGCGGCTGTGGGAC...GCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCGCGGGCTCGCGGCACTaGGGACAGGGCAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSAGSRH*GQGSGK
Trigger: CTTCCCACTGCCCTGTCCGCAGTGCCGCGAGCCCGC...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCCAGGAGCGTGGCCACTaGCGCCAGCTGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSQERGH*RQLPVG
Trigger: CCCAACCGGCAGCTGGCGGCAGTGGCCACGCTCCTG...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCCGCCAGCTGCCGGTTaGGCCGCAGCTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPPPAAG*AAADWG
Trigger: GCCCCAGTCAGCTGCGGCCCAACCGGCAGCTGGCGG...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCAAGACTGTGGTTGGCTTaGGGCCAGGCACATTGCTAC +
Preference number: 4 (lower is better)
Translates to: LSPSGAYLCSVCCLELAARLWLA*GQAHCY
Trigger: GTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCT...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVRRDCG*LGARHI
Trigger: AATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCT...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCACAGGACGCGGAGCTaGGCGCCGAGGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPHRTRS*APRAHW
Trigger: CCAGTGGGCCCTCGGCGCCCAGCTCCGCGTCCTGTG...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTAGATTCGCAAGTAGGTaGCCGTGGAGCAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVRFASR*PWSKQR
Trigger: TCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCT...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTAAGGTCTCGGGATCTTaGTTCCCCAAAAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVKVSGS*FPKSIC
Trigger: GCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTT...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCCGCACACCACGCAGATaGCGCGTCCGTCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSRTPRR*RVRRPG
Trigger: GCCAGGACGACGGACGCGCCATCTGCGTGGTGTGCG...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR TCA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCACAGCAGGACTGGCTTTaGCATTGTTTTAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSPSGAYLCSVCCLELAAQQDWL*HCFREP
Trigger: TGGCTCCCTAAAACAATGTCAAAGCCAGTCCTGCTG...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAAAGTTCCAGAAGCTTTaGTCTCCTTATCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKKFQKL*SPYPSS
Trigger: GCTGCTTGGATAAGGAGAGCAAAGCTTCTGGAACTT...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR GCA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAAACGAAGTGAGAATATaGGGCATGCAAGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: PQPLKAELAAVQKAAAMINEVRI*GMQVSY
Trigger: ATATGACACTTGCATGCCGCATATTCTCACTTCGTT...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CCA 90 bp TATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCAGATCTGGTCGCGCCTaGGCGGCCACTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: YPCFSAEIVMCSITRCFRRSGRA*AATGPH
Trigger: GTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCT...GCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp CTCTGGCCAAATCCACATGTGACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGTGCTTTTGAATTCCTaGAGAAAGTCAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LWPNPHVTSGREHPQESKVLLNS*RKSRSG
Trigger: GCCTGACCTTGACTTTCTCCAGGAATTCAAAAGCAC...TTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGTCACATGTGGATTTGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR TCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCCCTGGCAGTAGAGCTTaGAGGGTTCGCCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSPGSRA*RVRHAA
Trigger: GGCAGCATGGCGAACCCTTCAAGCTCTACTGCCAGG...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp TATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCAGAGCTCTAGGCAGATaGAGCACGTCGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: YPCFSAEIVMCSITRCFRRALGR*STSPRP
Trigger: AGGGCGAGGCGACGTGCTCCATCTGCCTAGAGCTCT...GCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp TATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCACTCCAAGAGCTCCTTaGCCTCCTGCACCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: YPCFSAEIVMCSITRCFRTPRAP*PPAPPR
Trigger: ACGAGGCGGTGCAGGAGGCCAAGGAGCTCTTGGAGT...GCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGTCAAGACCCTCAGCCTaGACTCCAAGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPSRPSA*TPRAPW
Trigger: CCAAGGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGA...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGTCACCAGCAGCTCCTTaGTCTCCTTCTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPSPAAP*SPSFPW
Trigger: CCACGGAAAAGAAGGAGAGCAAGGAGCTGCTGGTGA...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CCA 90 bp TATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGCTCTCCTTCTTTTCCGTaGACCGGAACACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: YPCFSAEIVMCSITRCFRSPSFP*TGTPHS
Trigger: ACTGTGAGGTGTTCCGGTCCACGGAAAAGAAGGAGA...GCGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR GCA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCTTTGTTGACAAAACATaGCATGAGGCTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSFVDKT*HEALYC
Trigger: ACAATAAAGAGCCTCATGGCATGTTTTGTCAACAAA...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS GCA 90 bp CGGGGCAGCCGCGGGCAGGCTGAAGCGCCGCAGGAGCGTGGCCACTaGCGCCAGCTGCCGGTTGGGCCGCAGCTGACTGGGGCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: RGSRGQAEAPQERGH*RQLPVGPQLTGARG
Trigger: CCCGCGCGCCCCAGTCAGCTGCGGCCCAACCGGCAGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCTTCAGCCTGCCCGCGGCTGCCCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS GCA 90 bp CCTCGGCGCCGGTTCCGGGGCCGGTCCGCGGTCCCACAGCCGCCATaGGCGCTCTCCGCGCACCCAGATCTGGTCGCGCCTGGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PRRRFRGRSAVPQPP*ALSAHPDLVAPGRP
Trigger: TGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGGAGAGCGCGCATGGCGGCTGTGGGACCGCGGACCGGCCCCGGAACCGGCGCCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS TCA 90 bp CGGCCGCCTGAGACCCGTGCTCTCCCGGGGCAGCCGCGGGCAGGCTaGAGCGCCGCAGGAGCGTGGCCACTGCCGCCAGCTGCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: RPPETRALPGQPRAG*SAAGAWPLPPAAGW
Trigger: CCAACCGGCAGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCTTCAGCCTGCCCGCGGCTGCCCCGGGAGAGCACGGGTCTCAGGCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS TCA 90 bp CCTCCAGGTCCAGGGCCACCCGCACGCGCGACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGCTGGTCACGGCCCAGTACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: PPGPGPPARATGARS*GATARGWSRPSTGR
Trigger: GCGGCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCGGGTGGCCCTGGACCTGGAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS GCA 90 bp ACGGCTCCCACCTCCAGGTCCAGGGCCACCCGCACGCGCGACAGGTaGCCGCAGCTGAGGGGCGACCGCTCGGGGCTGGTCACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TAPTSRSRATRTRDR*PQLRGDRSGLVTAQ
Trigger: CTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCGGGTGGCCCTGGACCTGGAGGTGGGAGCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 90 bp GCGCGCTCTCCGCGCACCCAGATCTGGTCGCGCCTGGGCGGCCACTaGACCTCACAGGACGCGGAGCTGGGCGCCGAGGGCCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: ARSPRTQIWSRLGGH*TSQDAELGAEGPLG
Trigger: TCCCAGTGGGCCCTCGGCGCCCAGCTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGGAGAGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS CCA 90 bp ACAGCCGCCATGCGCGCTCTCCGCGCACCCAGATCTGGTCGCGCCTaGGCGGCCACTGGACCTCACAGGACGCGGAGCTGGGCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TAAMRALRAPRSGRA*AATGPHRTRSWAPR
Trigger: CCTCGGCGCCCAGCTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGGAGAGCGCGCATGGCGGCTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS CCA 90 bp CCGCAGCTGAGGGGCGACCGCTCGGGGCTGGTCACGGCCCAGTACTaGCCGCCGTTGAGCTGCAGGGCCCAGACGCCCTCCTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PQLRGDRSGLVTAQY*PPLSCRAQTPSSGV
Trigger: CACTCCCGAGGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCTCAGCTGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS GCA 90 bp GACCGCTCGGGGCTGGTCACGGCCCAGTACTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCCTCGGGAGTGAAGGGCGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: DRSGLVTAQYWPPLS*RAQTPSSGVKGVRP
Trigger: GGGCCTGACGCCCTTCACTCCCGAGGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 90 bp CCGCAGGACGCCAGGACGCGGGTGTTGGTGTCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCCCGCTCGCCGAGGCGCACGCCCTTA +
Preference number: 5 (lower is better)
Translates to: PQDARTRVLVSKRQG*LGRSWARSPRRTPL
Trigger: TAAGGGCGTGCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGCGTCCTGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS-3UTR CAA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGCCAGGACGCGGGTGTaGGTGTCGAAGCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRARTRV*VSKRQG
Trigger: CCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CCA 90 bp ACGCGGGTGTTGGTGTCGAAGCGGCAGGGGTGGTTGGGCAGGTCCTaGGCCCGCTCGCCGAGGCGCACGCCCTTAAGATCCAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TRVLVSKRQGWLGRS*ARSPRRTPLRSRER
Trigger: CCTCTCTCTGGATCTTAAGGGCGTGCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGACACCAACACCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 90 bp GAGCCCGCTTCGGGGAAAGAGATAAGAGTGGGGGCAGCGGCTGCGTaGCTGTGCCGGAGACTTCCCGCGGGCAGAGAGCTGCGGAGACGC +
Preference number: 5 (lower is better)
Translates to: EPASGKEIRVGAAAA*LCRRLPAGRELRRR
Trigger: GCGTCTCCGCAGCTCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACTCTTATCTCTTTCCCCGAAGCGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CAA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATGCCAGGACGCGGGTGTaGGTGTCGAAGCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LGQQGSGARRADPRRTRHARTRV*VSKRQG
Trigger: CCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGC...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGGCTGCCAGGACGCGGGTGTaGGTGTCGAAGCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GWPRPRPAPWQQRTAGLAARTRV*VSKRQG
Trigger: CCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGC...AGCCAGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS GCA 90 bp ACCTCCCGGGACAGTTCCTCCAGGCGGCCTAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTCAGTGCCTGGAACTCTGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: TSRDSSSRRPSSRPS*STRKALSAWNSAPT
Trigger: GGTGGGGGCAGAGTTCCAGGCACTGAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCTAGGCCGCCTGGAGGAACTGTCCCGGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS GCA 90 bp AGCAGAGCCCGCTTCGGGGAAAGAGATAAGAGTGGGGGCAGCGGCTaGGTGGCTGTGCCGGAGACTTCCCGCGGGCAGAGAGCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: SRARFGERDKSGGSG*VAVPETSRGQRAAE
Trigger: CTCCGCAGCTCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACTCTTATCTCTTTCCCCGAAGCGGGCTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CAA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGGCCAGGACGCGGGTGTaGGTGTCGAAGCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRARTRV*VSKRQG
Trigger: CCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGC...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GGCGACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTGCCCCCCTCCCTGGACATCTaGGCGAGGTCCTCTCACTCA +
Preference number: 5 (lower is better)
Translates to: GDIPSHRQPRDRSSPAVPPSLDI*ARSSHS
Trigger: TGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGGG...GGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGTCGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS GCA 90 bp CAGCGGCTGCGTGGCTGTGCCGGAGACTTCCCGCGGGCAGAGAGCTaGGGAGACGCAGACCAGGCTAGAGGCTCCGAACAGACAGGAAGA +
Preference number: 5 (lower is better)
Translates to: QRLRGCAGDFPRAES*GDADQARGSEQTGR
Trigger: TCTTCCTGTCTGTTCGGAGCCTCTAGCCTGGTCTGCGTCTCCGCAGCTCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CAA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCACGAGGTGGGGACTTaGAGCAGAGCCCGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: LGQQGSGARRADPRRTRHHEVGT*SRARFG
Trigger: CCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGTG...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CAA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCATTGGGGCCAGGCACATaGCTACACCTGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: QDGPGISGEATSPPTGSPLGPGT*LHLLSV
Trigger: CACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAA...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS GCA 90 bp ACATCCCCTCCCACCGGCAGCCCAGAGACAGGAGCTCCCCAGCAGTaGCCCTCAAGGCCAGATTCGCAAGTAGGTGCCCGTGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TSPPTGSPETGAPQQ*PSRPDSQVGARGAN
Trigger: GTTTGCTCCACGGGCACCTACTTGCGAATCTGGCCTTGAGGGGCACTGCTGGGGAGCTCCTGTCTCTGGGCTGCCGGTGGGAGGGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS-3UTR CAA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCACAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: QDGPGISGEATSPPTGSPQKRLW*AWGQAH
Trigger: ATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTG...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACTGTTCCCCTGCTCGGTaGGCCACAGTCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: RLSWAAGVRSTEGRPKTDCSPAR*ATVTLL
Trigger: CAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA...GTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCTGTTCCCCTGCTCGGTaGGCCACAGTCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPCSPAR*ATVTLL
Trigger: CAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCCCGTGGCTGGGAGAGTaGGAGCAGGATGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: RKGTPSGVQSPCSPARLAPWLGE*EQDGPA
Trigger: TGCTGGCCCATCCTGCTCCAACTCTCCCAGCCACGG...GGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS GCA 90 bp GACAGCTGGGTGATCTCAACCCCGAGCTGGGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGGGACAGTTCCTCCAGGCGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: DSWVISTPSWARFSF*FCATSRDSSSRRPS
Trigger: GCTAGGCCGCCTGGAGGAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGATCACCCAGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTGACTCCAAGAGCTCCTaGGCCTCCTGCACCGCCTCG +
Preference number: 5 (lower is better)
Translates to: TSGREHPQESKAPVPLLGDSKSS*ASCTAS
Trigger: CGAGGCGGTGCAGGAGGCCAAGGAGCTCTTGGAGTC...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274773.12
CDS-3UTR CAA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATTTGGGGCCAGGCACATaGCTACACCTGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHLGPGT*LHLLSV
Trigger: CACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAA...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASQKRLW*AWGQAH
Trigger: ATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCGCTGTTGTCCCGGGCTaGTCACTCAAAGACGGGACA +
Preference number: 5 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPAVVPG*SLKDGT
Trigger: TGTCCCGTCTTTGAGTGACAAGCCCGGGACAACAGC...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGGAGAGCACGTGTTGGTaGTCGCATTGGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRESTCW*SHWSGC
Trigger: GCATCCTGACCAATGCGACAACCAACACGTGCTCTC...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 90 bp GTGGGGGAGCCTGGCAGTGCAAAGGCCCCGGGATGGGTGTGTGCTTaGTACACTGAAGGAACAGCAGGGAGGATGTGTAGCTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: VGEPGSAKAPGWVCA*YTEGTAGRMCSCVE
Trigger: CTCCACGCAGCTACACATCCTCCCTGCTGTTCCTTCAGTGTACCAAGCACACACCCATCCCGGGGCCTTTGCACTGCCAGGCTCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp CTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATATCTGGCTGCTGAGCTaGGACAGCTGGGTGATCTCA +
Preference number: 5 (lower is better)
Translates to: LGQQGSGARRADPRRTRHIWLLS*DSWVIS
Trigger: TGAGATCACCCAGCTGTCCAAGCTCAGCAGCCAGAT...ATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTA +
Preference number: 5 (lower is better)
Translates to: TWLAQAQTCPLATENSRTETVVG*GPGTLL
Trigger: TAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTC...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTA +
Preference number: 5 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRETVVG*GPGTLL
Trigger: TAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTC...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHQKRLW*AWGQAH
Trigger: ATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTG...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCACCCCGAAGGTCCTCTTaGAACTTCTTCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: QDGPGISGEATSPPTGSPPRRSS*NFFSIP
Trigger: AGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGGG...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCCCCGAAGGTCCTCTTaGAACTTCTTCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRPRRSS*NFFSIP
Trigger: AGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGGG...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGTGTTGGTTGTCGCATaGGTCAGGATGCACCCATCA +
Preference number: 5 (lower is better)
Translates to: GSGARRADPRRTRHLWGGVLVVA*VRMHPS
Trigger: TGATGGGTGCATCCTGACCAATGCGACAACCAACAC...GCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp CCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGGAGAGCACGTGTTGGTaGTCGCATTGGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: PKPLFPCSVGHSHSPASGESTCW*SHWSGC
Trigger: GCATCCTGACCAATGCGACAACCAACACGTGCTCTC...CCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTCCAGAATCGACAGCGTaGGCACAGTCAGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: TWLAQAQTCPLATENSRTPESTA*AQSDGS
Trigger: AGAGCCGTCTGACTGTGCCAACGCTGTCGATTCTGG...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS TCA 90 bp AGTGAGGCTAGAGCCCGTGGGCCCTTGAGACCTCCATGGGGACTCTaGCCTTTACCAAGTCAGAGGGGCTGTGGCAGGGCTCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SEARARGPLRPPWGL*PLPSQRGCGRALSR
Trigger: TCTGCTCAGAGCCCTGCCACAGCCCCTCTGACTTGGTAAAGGTCAGAGTCCCCATGGAGGTCTCAAGGGCCCACGGGCTCTAGCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp CTGCTCGGTTGGCCACAGTCACTCTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTA +
Preference number: 5 (lower is better)
Translates to: LLGWPQSLSCLGVVSVAGETVVG*GPGTLL
Trigger: TAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTC...GCCTGCTACAGACACAACCCCGAGGCAGGAGAGTGACTGTGGCCAACCGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: KRGWPRPRPAPWQQRTAGQKRLW*AWGQAH
Trigger: ATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTG...TCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCGTGTTGGTTGTCGCATaGGTCAGGATGCACCCATCA +
Preference number: 5 (lower is better)
Translates to: VCSRLSWAAGVRSTEGRPVLVVA*VRMHPS
Trigger: TGATGGGTGCATCCTGACCAATGCGACAACCAACAC...GGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 90 bp ATCTGGCTGCTGAGCTTGGACAGCTGGGTGATCTCAACCCCGAGCTaGGCCAGGTTCTCATTCTGCTTCTGTGCCACCTCCCGGGACAGT +
Preference number: 5 (lower is better)
Translates to: IWLLSLDSWVISTPS*ARFSFCFCATSRDS
Trigger: ACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGATCACCCAGCTGTCCAAGCTCAGCAGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CCA 90 bp ACCAAGTCAGAGGGGCTGTGGCAGGGCTCTGAGCAGAGGAGGGCCTaGTCTCACTCAGGTGTTTTAGGTGGCACCCAGACACACTCTGAC +
Preference number: 5 (lower is better)
Translates to: TKSEGLWQGSEQRRA*SHSGVLGGTQTHSD
Trigger: GTCAGAGTGTGTCTGGGTGCCACCTAAAACACCTGAGTGAGACCAGGCCCTCCTCTGCTCAGAGCCCTGCCACAGCCCCTCTGACTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp AGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCATGTTTCAGCAGCTCCTaGCTCTCCTTCTTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: RPKTDQASLGRRHPLPPACFSSS*LSFFSV
Trigger: CACGGAAAAGAAGGAGAGCAAGGAGCTGCTGAAACA...TGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTTGTTTCAGCAGCTCCTaGCTCTCCTTCTTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASCFSSS*LSFFSV
Trigger: CACGGAAAAGAAGGAGAGCAAGGAGCTGCTGAAACA...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTGCTGTTGTCCCGGGCTaGTCACTCAAAGACGGGACA +
Preference number: 5 (lower is better)
Translates to: TSGREHPQESKAPVPLLGAVVPG*SLKDGT
Trigger: TGTCCCGTCTTTGAGTGACAAGCCCGGGACAACAGC...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGAGCAGCGTTTGTACTTaGGCACTGGAAAGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRSSVCT*ALESAG
Trigger: TCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCT...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp GCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGTTTGTGCTCTGTGTGTaGTTTAGAGCTGGCTGCATC +
Preference number: 5 (lower is better)
Translates to: ADPRRTRHLWGGDIPSHRFVLCV*FRAGCI
Trigger: GATGCAGCCAGCTCTAAACAACACACAGAGCACAAA...CCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 90 bp TTTCCATCCATCTTGGAGTGGGGACCGGGTAGAGGCTCACCCAGGTaGCCGAGAAGCCTTTCCCAGTCTGAGTATCTCGAGGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: FPSILEWGPGRGSPR*PRSLSQSEYLEVQG
Trigger: GCCCTGTACCTCGAGATACTCAGACTGGGAAAGGCTTCTCGGCCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGATGGATGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 90 bp CTGTATACACCCCATTCCCAGGAGAGGTTTCCATCCATCTTGGAGTaGGGACCGGGTAGAGGCTCACCCAGGTGGCCGAGAAGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LYTPHSQERFPSILE*GPGRGSPRWPRSLS
Trigger: GGAAAGGCTTCTCGGCCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGATGGATGGAAACCTCTCCTGGGAATGGGGTGTATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp GAAGGCAGCAGCCATGATAACAAACGTGGTTGGCCCAGGCCCAGACCTGCCCCCGTCAAGGTCAGGCTTTaGAGCTGTCTCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: EGSSHDNKRGWPRPRPAPVKVRL*SCLLDL
Trigger: CAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGAC...GGGGGCAGGTCTGGGCCTGGGCCAACCACGTTTGTTATCATGGCTGCTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp TGGGCAGCAGGGGTCAGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGCTCAGCGTGCTTTaGAATTCCTGGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: WAAGVRSTEGRPKTDQASLLSVL*NSWRKS
Trigger: TGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCAG...AGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCTGACCCCTGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATATTGGGGCCAGGCACATaGCTACACCTGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PQPLKAELAAVQKAAAMILGPGT*LHLLSV
Trigger: CACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAA...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATATGTTCCCCTGCTCGGTaGGCCACAGTCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: PQPLKAELAAVQKAAAMICSPAR*ATVTLL
Trigger: CAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCCCCTCCCTGGACATCTaGGCGAGGTCCTCTCACTCA +
Preference number: 5 (lower is better)
Translates to: RESGVCESTCWLSHWSGCPSLDI*ARSSHS
Trigger: TGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGGG...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CAA 90 bp CAAGACGGACCAGGCATCTCTGGGGAGGCGACATCCCCTCCCACCGGCAGCCCATATGTGAACACACGTTaGGCACTCAATATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QDGPGISGEATSPPTGSPYVNTR*ALNMSH
Trigger: GTGGGACATATTGAGTGCCAAACGTGTGTTCACATA...TGGGCTGCCGGTGGGAGGGGATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 90 bp GAGGTGACTCTGAAGGTCTCGGGATCTTGCTTCCCCAAAAGCATCTaGTGGACCAGCCAGACTGAAACACAAGCTCCGGCAGCCCTACCC +
Preference number: 5 (lower is better)
Translates to: EVTLKVSGSCFPKSI*WTSQTETQAPAALP
Trigger: GGGTAGGGCTGCCGGAGCTTGTGTTTCAGTCTGGCTGGTCCAGCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTCAGAGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CAA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTGTCAAGGTCAGGCTTTaGAGCTGTCTCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: TSGREHPQESKAPVPLLGVKVRL*SCLLDL
Trigger: CAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGAC...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCAGTCAAGGTCAGGCTTTaGAGCTGTCTCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPVKVRL*SCLLDL
Trigger: CAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGAC...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp ACGTGGTTGGCCCAGGCCCAGACCTGCCCCCTGGCAACAGAGAACAGCAGGACTCTGCTCAGCGTGCTTTaGAATTCCTGGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TWLAQAQTCPLATENSRTLLSVL*NSWRKS
Trigger: TGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCAG...AGTCCTGCTGTTCTCTGTTGCCAGGGGGCAGGTCTGGGCCTGGGCCAACCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCTGTTCCCCTGCTCGGTaGGCCACAGTCACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLCSPAR*ATVTLL
Trigger: CAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACA...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTCACGAGGTGGGGACTTaGAGCAGAGCCCGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVHEVGT*SRARFG
Trigger: CCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGTG...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS-3UTR CAA 90 bp CCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAGGGAGTCCTGTGAAGTaGGGAGACCTGGGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: PQPLKAELAAVQKAAAMIGSPVK*GDLGSR
Trigger: CCTTGAACCCAGGTCTCCCAACTTCACAGGACTCCC...TATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 90 bp CTGTCACTGCTGGAGGATCGGAGACACACCCACCTACGCACGCAGTaGGTGCTCTATTGTCAGTGTCCCAGCTCTGAACAAGCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LSLLEDRRHTHLRTQ*VLYCQCPSSEQAVV
Trigger: GACTACAGCTTGTTCAGAGCTGGGACACTGACAATAGAGCACGCACTGCGTGCGTAGGTGGGTGTGTCTCCGATCCTCCAGCAGTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CAA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTTTGGGGCCAGGCACATaGCTACACCTGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: KAELAAVQKAAAMITNVVLGPGT*LHLLSV
Trigger: CACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAA...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CTCCTGCCTCGGGGTTGTGTCTGTAGCAGGCTCTCTTGGGCAGCAGGGGTCAGGTTATCCAAGCAGCGTTaGTACTTTGGCACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLPRGCVCSRLSWAAGVRLSKQR*YFGTGK
Trigger: CTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAA...CCTGACCCCTGCTGCCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp GGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTTGGCCATTTGTGCTCTGTGTGTaGTTTAGAGCTGGCTGCATC +
Preference number: 5 (lower is better)
Translates to: GREHPQESKAPVPLLGWPFVLCV*FRAGCI
Trigger: GATGCAGCCAGCTCTAAACAACACACAGAGCACAAA...TGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS GCA 90 bp AGGAACAGGGTTGCTGAGGTGGGTGGGCTGAAGGAACCGACCATATaGAAAACCCTGAGATGGTCACGAGCAGGGAGTAGGATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: RNRVAEVGGLKEPTI*KTLRWSRAGSRISV
Trigger: CACAGAGATCCTACTCCCTGCTCGTGACCATCTCAGGGTTTTGCATATGGTCGGTTCCTTCAGCCCACCCACCTCAGCAACCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 90 bp CCGCTGCCATCTGTTTCAGCAGCTCCTTGCTCTCCTTCTTTTCCGTaGACCGGAACACCTCACAGTCCTCCAGTTCCTTCTTCAAGACCC +
Preference number: 5 (lower is better)
Translates to: PLPSVSAAPCSPSFP*TGTPHSPPVPSSRP
Trigger: GGGTCTTGAAGAAGGAACTGGAGGACTGTGAGGTGTTCCGGTCCACGGAAAAGAAGGAGAGCAAGGAGCTGCTGAAACAGATGGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp ACCTCAGGAAGGGAACACCCTCAGGAGTCCAAAGCCCCTGTTCCCCTGCTCGGTCTGCTCAGCGTGCTTTaGAATTCCTGGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TSGREHPQESKAPVPLLGLLSVL*NSWRKS
Trigger: TGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCAG...ACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp AGGTCCCACAACCTCTCAAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCACTGCTCAGCGTGCTTTaGAATTCCTGGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RSHNLSRQSWQLSRRQQPLLSVL*NSWRKS
Trigger: TGACTTTCTCCAGGAATTCAAAAGCACGCTGAGCAG...TGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTGAGAGGTTGTGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS-3UTR CAA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCAGCAGCGTTTGTACTTaGGCACTGGAAAGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: RESGVCESTCWLSHWSGCSSVCT*ALESAG
Trigger: TCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCT...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCCAGAATCGACAGCGTaGGCACAGTCAGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: KAELAAVQKAAAMITNVVPESTA*AQSDGS
Trigger: AGAGCCGTCTGACTGTGCCAACGCTGTCGATTCTGG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS-3UTR CAA 90 bp CGGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCGAAGGTCTCGGGATCTaGCTTCCCCAAAAGCATCTG +
Preference number: 5 (lower is better)
Translates to: RESGVCESTCWLSHWSGCEGLGI*LPQKHL
Trigger: CAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTC...GCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS TCA 90 bp AAGTTCCTCTTCCTTAAAACTCCTGGGCGGAGGAAGGGAGTCCTGTaGAGTTGGGAGACCTGGGTTCAAGGTGTCCTACAATGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: KFLFLKTPGRRKGVL*SWETWVQGVLQCPH
Trigger: GTGGGGGCATTGTAGGACACCTTGAACCCAGGTCTCCCAACTTCACAGGACTCCCTTCCTCCGCCCAGGAGTTTTAAGGAAGAGGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS TCA 90 bp GGCCTGGTCTCACTCAGGTGTTTTAGGTGGCACCCAGACACACTCTaGCTTAGCTCAGACATCAGCATCAGGAATATGTGCCCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GLVSLRCFRWHPDTL*LSSDISIRNMCPPL
Trigger: GAGGGGAGGGCACATATTCCTGATGCTGATGTCTGAGCTAAGTCAGAGTGTGTCTGGGTGCCACCTAAAACACCTGAGTGAGACCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp GGGAGTCAGGGGTTTGTGAGAGCACGTGTTGGTTGTCGCATTGGTCAGGATGCAGTCAAGGTCAGGCTTTaGAGCTGTCTCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GSQGFVRARVGCRIGQDAVKVRL*SCLLDL
Trigger: CAGATCCAGGAGACAGCTCAAAAGCCTGACCTTGAC...TGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp AGGAGCACGGAGGGCAGACCCAAGACGGACCAGGCATCTCTGGGGAGGCGACATGTGCCAACTTGTGTTTaGTGTTTCAAAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RSTEGRPKTDQASLGRRHVPTCV*CFKVPE
Trigger: TTCTGGAACTTTGAAACACAAAACACAAGTTGGCAC...ATGTCGCCTCCCCAGAGATGCCTGGTCCGTCTTGGGTCTGCCCTCCGTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS GCA 90 bp GGCTACAGGTTACACTGCGAGGTGACTCTGAAGGTCTCGGGATCTTaGTTCCCCAAAAGCATCTGCTGGACCAGCCAGACTGAAACACAA +
Preference number: 5 (lower is better)
Translates to: GYRLHCEVTLKVSGS*FPKSICWTSQTETQ
Trigger: TTGTGTTTCAGTCTGGCTGGTCCAGCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTCAGAGTCACCTCGCAGTGTAACCTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS CCA 90 bp ACATGCTCTTTTCTCCCCTGCCACAGATGCACCCACACATGTCTGTaGACCTGTGCTCCATCACCTAAACCAAGGCAGCTTCATACTCCC +
Preference number: 5 (lower is better)
Translates to: TCSFLPCHRCTHTCL*TCAPSPKPRQLHTP
Trigger: GGGAGTATGAAGCTGCCTTGGTTTAGGTGATGGAGCACAGGTCCACAGACATGTGTGGGTGCATCTGTGGCAGGGGAGAAAAGAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS CCA 90 bp TGCAAAACCCTGAGATGGTCACGAGCAGGGAGTAGGATCTCTGTGTaGCAGACAGTCCATACTCGCCATCACAGCACCATCCCTACCTTT +
Preference number: 5 (lower is better)
Translates to: CKTLRWSRAGSRISV*QTVHTRHHSTIPTF
Trigger: AAAGGTAGGGATGGTGCTGTGATGGCGAGTATGGACTGTCTGCCACACAGAGATCCTACTCCCTGCTCGTGACCATCTCAGGGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCAGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTA +
Preference number: 5 (lower is better)
Translates to: LSPSGAYLCSVCCLELAAETVVG*GPGTLL
Trigger: TAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTC...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 90 bp TGCGTGCTCTATTGTCAGTGTCCCAGCTCTGAACAAGCTGTAGTCTaGACACATGCTCTTTTCTCCCCTGCCACAGATGCACCCACACAT +
Preference number: 5 (lower is better)
Translates to: CVLYCQCPSSEQAVV*THALFSPATDAPTH
Trigger: ATGTGTGGGTGCATCTGTGGCAGGGGAGAAAAGAGCATGTGTCCAGACTACAGCTTGTTCAGAGCTGGGACACTGACAATAGAGCACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CAA 90 bp CTTATCCAAGCAGCGTTTGTACTTTGGCACTGGAAAGTGCGGGAGTCAGGGGTTCCCCGAAGGTCCTCTTaGAACTTCTTCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: LIQAAFVLWHWKVRESGVPRRSS*NFFSIP
Trigger: AGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGGG...AACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp CTGAGTCCGTCAGGAGCATATTTGTGCTCTGTGTGTTGTTTAGAGCTGGCTGCACCCCGAAGGTCCTCTTaGAACTTCTTCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: LSPSGAYLCSVCCLELAAPRRSS*NFFSIP
Trigger: AGGGATGCTGAAGAAGTTCAAAGAGGACCTTCGGGG...TGCAGCCAGCTCTAAACAACACACAGAGCACAAATATGCTCCTGACGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTTTATCCAAGCAGCGTTaGTACTTTGGCACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KAELAAVQKAAAMITNVVLSKQR*YFGTGK
Trigger: CTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAA...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS-3UTR CAA 90 bp AAGGCAGAGCTGGCAGCTGTCCAGAAGGCAGCAGCCATGATAACAAACGTGGTTCTGCAGCTTCCTCACTaGAAAAGCAGAAGGGATAAA +
Preference number: 5 (lower is better)
Translates to: KAELAAVQKAAAMITNVVLQLPH*KSRRDK
Trigger: TTTATCCCTTCTGCTTTTCAAGTGAGGAAGCTGCAG...AACCACGTTTGTTATCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS-3UTR CAA 90 bp ATATCCATGTTTCTCTGCAGAAATAGTAATGTGTTCCATTACAAGATGCTTCCGGACTCCAAGAGCTCCTaGGCCTCCTGCACCGCCTCG +
Preference number: 5 (lower is better)
Translates to: ISMFLCRNSNVFHYKMLPDSKSS*ASCTAS
Trigger: CGAGGCGGTGCAGGAGGCCAAGGAGCTCTTGGAGTC...CGGAAGCATCTTGTAATGGAACACATTACTATTTCTGCAGAGAAACATGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS-3UTR CAA 90 bp GTCACTCAAAGACGGGACAGATGTCTCCTTCCAGTTCTGGCCCAGACTGTCCTCGTGCCAACTTGTGTTTaGTGTTTCAAAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: VTQRRDRCLLPVLAQTVLVPTCV*CFKVPE
Trigger: TTCTGGAACTTTGAAACACAAAACACAAGTTGGCAC...GAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 90 bp AGAAACATTCCAGACTTTATTCTTCATCTCAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATTGCTACACCTGCTCAGCGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: RNIPDFILHLRRDCG*LGARHIATPAQRAF
Trigger: AAAAGCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGGAATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS GCA 90 bp GTGACCAGAGGTAGCAGCACACCCCCAAGGAACGAAGTGAGAATATaGGGCATGCAAGTGTCATATTCTGTTCTTTCCATTAACAGCATA +
Preference number: 5 (lower is better)
Translates to: VTRGSSTPPRNEVRI*GMQVSYSVLSINSI
Trigger: TATGCTGTTAATGGAAAGAACAGAATATGACACTTGCATGCCGCATATTCTCACTTCGTTCCTTGGGGGTGTGCTGCTACCTCTGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS CCA 90 bp CGACCACTCAACAAGTACTTACTGAAATCAAACAAATGCAATGTGTaGGCCTGGTTTGAACCCCAATTCAACAGATGGGGATATTTGAAT +
Preference number: 5 (lower is better)
Translates to: RPLNKYLLKSNKCNV*AWFEPQFNRWGYLN
Trigger: ATTCAAATATCCCCATCTGTTGAATTGGGGTTCAAACCAGGCCCACACATTGCATTTGTTTGATTTCAGTAAGTACTTGTTGAGTGGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 90 bp CTCAACAAGTACTTACTGAAATCAAACAAATGCAATGTGTGGGCCTaGTTTGAACCCCAATTCAACAGATGGGGATATTTGAATGCTAGA +
Preference number: 5 (lower is better)
Translates to: LNKYLLKSNKCNVWA*FEPQFNRWGYLNAR
Trigger: TCTAGCATTCAAATATCCCCATCTGTTGAATTGGGGTTCAAACCAGGCCCACACATTGCATTTGTTTGATTTCAGTAAGTACTTGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS-3UTR CAA 90 bp ATTCGCTGGGACAGCTCCAGTTTAAGCCAGTTGTTTTGCAATAATTATTTTAGCTTCACTACTGTTTTGTaGACAAAACATGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: IRWDSSSLSQLFCNNYFSFTTVL*TKHAMR
Trigger: CCTCATGGCATGTTTTGTCAACAAAACAGTAGTGAA...GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGCTGTCCCAGCGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334421.5
CDS TCA 72 bp CCAGGGCCACCCGCACGCGCGACAGGTGCCCGCAGCTaGGGGGCGACCGCTCGGGGCTGGTCACGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: PGPPARATGARS*GATARGWSRPS
Trigger: ACTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCTCAGCTGCGGGCACCTGTCGCGCGTGCGGGTGGCCCTGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS TCA 72 bp GAGACCCGTGCTCTCCCGGGGCAGCCGCGGGCAGGCTaGAGCGCCGCAGGAGCGTGGCCACTGCCGCCAGCT +
Preference number: 6 (lower is better)
Translates to: ETRALPGQPRAG*SAAGAWPLPPA
Trigger: AGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCTTCAGCCTGCCCGCGGCTGCCCCGGGAGAGCACGGGTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS GCA 72 bp CGGTTCCGGGGCCGGTCCGCGGTCCCACAGCCGCCATaGGCGCTCTCCGCGCACCCAGATCTGGTCGCGCCT +
Preference number: 6 (lower is better)
Translates to: RFRGRSAVPQPP*ALSAHPDLVAP
Trigger: AGGCGCGACCAGATCTGGGTGCGCGGAGAGCGCGCATGGCGGCTGTGGGACCGCGGACCGGCCCCGGAACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS GCA 72 bp CGCGGGCAGGCTGAAGCGCCGCAGGAGCGTGGCCACTaGCGCCAGCTGCCGGTTGGGCCGCAGCTGACTGGG +
Preference number: 6 (lower is better)
Translates to: RGQAEAPQERGH*RQLPVGPQLTG
Trigger: CCCAGTCAGCTGCGGCCCAACCGGCAGCTGGCGGCAGTGGCCACGCTCCTGCGGCGCTTCAGCCTGCCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS CCA 72 bp CCGCGCACCCAGATCTGGTCGCGCCTGGGCGGCCACTaGACCTCACAGGACGCGGAGCTGGGCGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: PRTQIWSRLGGH*TSQDAELGAEG
Trigger: GCCCTCGGCGCCCAGCTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS CCA 72 bp GGACGCGGGTGTTGGTGTCGAAGCGGCAGGGGTGGTTaGGCAGGTCCTGGGCCCGCTCGCCGAGGCGCACGC +
Preference number: 6 (lower is better)
Translates to: GRGCWCRSGRGG*AGPGPARRGAR
Trigger: GCGTGCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGACACCAACACCCGCGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 72 bp GCCAGGACGCGGGTGTTGGTGTCGAAGCGGCAGGGGTaGTTGGGCAGGTCCTGGGCCCGCTCGCCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: ARTRVLVSKRQG*LGRSWARSPRR
Trigger: GCGCCTCGGCGAGCGGGCCCAGGACCTGCCCAACCACCCCTGCCGCTTCGACACCAACACCCGCGTCCTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 72 bp AGGGGCGACCGCTCGGGGCTGGTCACGGCCCAGTACTaGCCGCCGTTGAGCTGCAGGGCCCAGACGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RGDRSGLVTAQY*PPLSCRAQTPS
Trigger: GGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CAA 90 bp AGGGGCGACCGCTCGGGGCTGGTCACGGCCCAGTACTGGCCGCCGTaGAGCTGCAGGGCCCAGACGCCCTCCTCGGGAGTGAAGGGCGTC +
Preference number: 6 (lower is better)
Translates to: RGDRSGLVTAQYWPP*SCRAQTPSSGVKGV
Trigger: GACGCCCTTCACTCCCGAGGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGACCAGCCCCGAGCGGTCGCCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS GCA 72 bp GGGCTGGTCACGGCCCAGTACTGGCCGCCGTTGAGCTaGAGGGCCCAGACGCCCTCCTCGGGAGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: GLVTAQYWPPLS*RAQTPSSGVKG
Trigger: GCCCTTCACTCCCGAGGAGGGCGTCTGGGCCCTGCAGCTCAACGGCGGCCAGTACTGGGCCGTGACCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 72 bp ATGCGCGCTCTCCGCGCACCCAGATCTGGTCGCGCCTaGGCGGCCACTGGACCTCACAGGACGCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: MRALRAPRSGRA*AATGPHRTRSW
Trigger: CCAGCTCCGCGTCCTGTGAGGTCCAGTGGCCGCCCAGGCGCGACCAGATCTGGGTGCGCGGAGAGCGCGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS TCA 72 bp CGCAGATGGCGCGTCCGTCGTCCTGGCAGTAGAGCTTaGAGGGTTCGCCATGCTGCCCGCAGCGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RRWRVRRPGSRA*RVRHAARSGQP
Trigger: CGGCTGCCCGCTGCGGGCAGCATGGCGAACCCTTCAAGCTCTACTGCCAGGACGACGGACGCGCCATCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS GCA 72 bp CGTGGCTGTGCCGGAGACTTCCCGCGGGCAGAGAGCTaGGGAGACGCAGACCAGGCTAGAGGCTCCGAACAG +
Preference number: 6 (lower is better)
Translates to: RGCAGDFPRAES*GDADQARGSEQ
Trigger: CTGTTCGGAGCCTCTAGCCTGGTCTGCGTCTCCGCAGCTCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS CCA 72 bp CCAGGAAGCCCCGTGGCTGGGAGAGTTGGAGCAGGATaGGCCAGCAAGGAGAGACTGGGGACTGCCGCCCGA +
Preference number: 6 (lower is better)
Translates to: PGSPVAGRVGAG*ASKERLGTAAR
Trigger: TCGGGCGGCAGTCCCCAGTCTCTCCTTGCTGGCCCATCCTGCTCCAACTCTCCCAGCCACGGGGCTTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS GCA 72 bp CGCTTCGGGGAAAGAGATAAGAGTGGGGGCAGCGGCTaGGTGGCTGTGCCGGAGACTTCCCGCGGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: RFGERDKSGGSG*VAVPETSRGQR
Trigger: TCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACTCTTATCTCTTTCCCCGAAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS CCA 72 bp CGACGGACACCGGCTCACGAAAGAGCTCTAGGCAGATaGAGCACGTCGCCTCGCCCTGCAGCTCTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RRTPAHERALGR*STSPRPAALPP
Trigger: TGGCGGCAGAGCTGCAGGGCGAGGCGACGTGCTCCATCTGCCTAGAGCTCTTTCGTGAGCCGGTGTCCGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000334421.5
CDS CCA 72 bp TCGGGGAAAGAGATAAGAGTGGGGGCAGCGGCTGCGTaGCTGTGCCGGAGACTTCCCGCGGGCAGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SGKEIRVGAAAA*LCRRLPAGREL
Trigger: CAGCTCTCTGCCCGCGGGAAGTCTCCGGCACAGCCACGCAGCCGCTGCCCCCACTCTTATCTCTTTCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS CCA 72 bp CGCGGCTTAACCCGGGAGCCCCCTCCCTGGACATCTTaGCGAGGTCCTCTCACTCAGTTCCACGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: RGLTREPPPWTS*RGPLTQFHEVG
Trigger: CCCCACCTCGTGGAACTGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGGGGGCTCCCGGGTTAAGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS CAA 72 bp GCGCGGCTTAACCCGGGAGCCCCCTCCCTGGACATCTaGGCGAGGTCCTCTCACTCAGTTCCACGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: ARLNPGAPSLDI*ARSSHSVPRGG
Trigger: CCCACCTCGTGGAACTGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGGGGGCTCCCGGGTTAAGCCGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS GCA 72 bp GACAGTTCCTCCAGGCGGCCTAGCAGCCGACCCTCCTaGTCCACCAGGAAAGCCCTCAGTGCCTGGAACTCT +
Preference number: 6 (lower is better)
Translates to: DSSSRRPSSRPS*STRKALSAWNS
Trigger: AGAGTTCCAGGCACTGAGGGCTTTCCTGGTGGAGCAGGAGGGTCGGCTGCTAGGCCGCCTGGAGGAACTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CAA 90 bp GCTCTAGGTGCGCGGCTTAACCCGGGAGCCCCCTCCCTGGACATCTaGGCGAGGTCCTCTCACTCAGTTCCACGAGGTGGGGACTTTGAG +
Preference number: 6 (lower is better)
Translates to: ALGARLNPGAPSLDI*ARSSHSVPRGGDFE
Trigger: CTCAAAGTCCCCACCTCGTGGAACTGAGTGAGAGGACCTCGCCAAGATGTCCAGGGAGGGGGCTCCCGGGTTAAGCCGCGCACCTAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS CAA 90 bp TCCTGTAGTCCCAGCTACTCGAGGACGCCCAGGAGAGAGGATCGCTaGAGCTTGCGGGGTGGAGGCTGCAGTTCCACTGCACTCCACCCT +
Preference number: 6 (lower is better)
Translates to: SCSPSYSRTPRREDR*SLRGGGCSSTALHP
Trigger: AGGGTGGAGTGCAGTGGAACTGCAGCCTCCACCCCGCAAGCTCAAGCGATCCTCTCTCCTGGGCGTCCTCGAGTAGCTGGGACTACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS TCA 72 bp AGAGCCCGTGGGCCCTTGAGACCTCCATGGGGACTCTaGCCTTTACCAAGTCAGAGGGGCTGTGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RARGPLRPPWGL*PLPSQRGCGRA
Trigger: AGCCCTGCCACAGCCCCTCTGACTTGGTAAAGGTCAGAGTCCCCATGGAGGTCTCAAGGGCCCACGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS GCA 72 bp GAGTCATCCCACAGGGCAAGGCTTCGTCCCTGTCACTaGTGGAGGATCGGAGACACACCCACCTACGCACGC +
Preference number: 6 (lower is better)
Translates to: ESSHRARLRPCH*WRIGDTPTYAR
Trigger: GCGTGCGTAGGTGGGTGTGTCTCCGATCCTCCAGCAGTGACAGGGACGAAGCCTTGCCCTGTGGGATGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 72 bp CGGGTTGGCCGTGTCGGGATCCAAGGTGAGCTCCACTaGAGACAGAGACAGGGAGAAATGTCCCCACGCAGC +
Preference number: 6 (lower is better)
Translates to: RVGRVGIQGELH*RQRQGEMSPRS
Trigger: GCTGCGTGGGGACATTTCTCCCTGTCTCTGTCTGCAGTGGAGCTCACCTTGGATCCCGACACGGCCAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp CCCCATTCCCAGGAGAGGTTTCCATCCATCTTGGAGTaGGGACCGGGTAGAGGCTCACCCAGGTGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: PHSQERFPSILE*GPGRGSPRWPR
Trigger: TCTCGGCCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGATGGATGGAAACCTCTCCTGGGAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS GCA 72 bp GTGATCTCAACCCCGAGCTGGGCCAGGTTCTCATTCTaGTTCTGTGCCACCTCCCGGGACAGTTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VISTPSWARFSF*FCATSRDSSSR
Trigger: CCTGGAGGAACTGTCCCGGGAGGTGGCACAGAAGCAGAATGAGAACCTGGCCCAGCTCGGGGTTGAGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CCA 72 bp TCATCCCACAGGGCAAGGCTTCGTCCCTGTCACTGCTaGAGGATCGGAGACACACCCACCTACGCACGCAGT +
Preference number: 6 (lower is better)
Translates to: SSHRARLRPCHC*RIGDTPTYARS
Trigger: ACTGCGTGCGTAGGTGGGTGTGTCTCCGATCCTCCAGCAGTGACAGGGACGAAGCCTTGCCCTGTGGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 72 bp CCAGCAGTGCCCCTCAAGGCCAGATTCGCAAGTAGGTaGCCGTGGAGCAAACAGAGAAAAGCGGGAACACGC +
Preference number: 6 (lower is better)
Translates to: PAVPLKARFASR*PWSKQRKAGTR
Trigger: GCGTGTTCCCGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCTGGCCTTGAGGGGCACTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 72 bp GTGCCCCTCAAGGCCAGATTCGCAAGTAGGTGCCCGTaGAGCAAACAGAGAAAAGCGGGAACACGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: VPLKARFASRCP*SKQRKAGTRAP
Trigger: AGGAGCGCGTGTTCCCGCTTTTCTCTGTTTGCTCCACGGGCACCTACTTGCGAATCTGGCCTTGAGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
ENST00000504241.1
CDS CCA 72 bp CACAGTCCTCCAGTTCCTTCTTCAAGACCCTCAGCCTaGACTCCAAGAGCTCTGAGGGGGAGGCCGGGTAGA +
Preference number: 6 (lower is better)
Translates to: HSPPVPSSRPSA*TPRALRGRPGR
Trigger: TCTACCCGGCCTCCCCCTCAGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGAAGAAGGAACTGGAGGACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000509199.1
CDS CCA 72 bp CACAGTCCTCCAGTTCCTTCTTCAAGACCCTCAGCCTaGACTCCAAGAGCTCCCTCGCTGAGGCTCAGCGAG +
Preference number: 6 (lower is better)
Translates to: HSPPVPSSRPSA*TPRAPSLRLSE
Trigger: CTCGCTGAGCCTCAGCGAGGGAGCTCTTGGAGTCCAGGCTGAGGGTCTTGAAGAAGGAACTGGAGGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422067.2
CDS CCA 72 bp ATCTTGGAGTGGGGACCGGGTAGAGGCTCACCCAGGTaGCCGAGAAGCCTTTCCCAGTCTGAGTATCTCGAG +
Preference number: 6 (lower is better)
Translates to: ILEWGPGRGSPR*PRSLSQSEYLE
Trigger: CTCGAGATACTCAGACTGGGAAAGGCTTCTCGGCCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp ATACACCCCATTCCCAGGAGAGGTTTCCATCCATCTTaGAGTGGGGACCGGGTAGAGGCTCACCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: IHPIPRRGFHPS*SGDRVEAHPGG
Trigger: GCCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGATGGATGGAAACCTCTCCTGGGAATGGGGTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 90 bp ATCTCGAGGTACAGGGCATTCCTGCTCCTAACCAACCTGCAGCATTaGGGCCAACATCTGAGGGTGTCAGAGCTCCCAGGATGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: ISRYRAFLLLTNLQH*GQHLRVSELPGWGG
Trigger: CCCTCCCCATCCTGGGAGCTCTGACACCCTCAGATGTTGGCCCAAATGCTGCAGGTTGGTTAGGAGCAGGAATGCCCTGTACCTCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS GCA 72 bp CCTGGGGGTACCACAGAGTATCAGAGTAGTCCTGCCTaGCTGCAGCTTCCTTCCCACAGGGAGAGGATTGAG +
Preference number: 6 (lower is better)
Translates to: PGGTTEYQSSPA*LQLPSHRERIE
Trigger: CTCAATCCTCTCCCTGTGGGAAGGAAGCTGCAGGCAGGCAGGACTACTCTGATACTCTGTGGTACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp TATAAAGAAGGCAAAGAAGCAGGCCACAGGACTGGCTaGGGAAAGCATGCTCCAGGTAGGGGCCTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: YKEGKEAGHRTG*GKHAPGRGLGW
Trigger: CCACCCCAGGCCCCTACCTGGAGCATGCTTTCCCCAGCCAGTCCTGTGGCCTGCTTCTTTGCCTTCTTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 72 bp TATACACCCCATTCCCAGGAGAGGTTTCCATCCATCTaGGAGTGGGGACCGGGTAGAGGCTCACCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: YTPHSQERFPSI*EWGPGRGSPRW
Trigger: CCACCTGGGTGAGCCTCTACCCGGTCCCCACTCCAAGATGGATGGAAACCTCTCCTGGGAATGGGGTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS TCA 72 bp GAGGTCCTCTCACTCAGTTCCACGAGGTGGGGACTTTaGGCAGAGCCCGCTTCGGGGAAAGAGATAAGAGTG +
Preference number: 6 (lower is better)
Translates to: EVLSLSSTRWGL*AEPASGKEIRV
Trigger: CACTCTTATCTCTTTCCCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGTGGAACTGAGTGAGAGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS GCA 72 bp CTGGAGGATCGGAGACACACCCACCTACGCACGCAGTaGGTGCTCTATTGTCAGTGTCCCAGCTCTGAACAA +
Preference number: 6 (lower is better)
Translates to: LEDRRHTHLRTQ*VLYCQCPSSEQ
Trigger: TTGTTCAGAGCTGGGACACTGACAATAGAGCACGCACTGCGTGCGTAGGTGGGTGTGTCTCCGATCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 72 bp GTTGCTGAGGTGGGTGGGCTGAAGGAACCGACCATATaGAAAACCCTGAGATGGTCACGAGCAGGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: VAEVGGLKEPTI*KTLRWSRAGSR
Trigger: CCTACTCCCTGCTCGTGACCATCTCAGGGTTTTGCATATGGTCGGTTCCTTCAGCCCACCCACCTCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 72 bp CGAGGTCCTCTCACTCAGTTCCACGAGGTGGGGACTTaGAGCAGAGCCCGCTTCGGGGAAAGAGATAAGAGT +
Preference number: 6 (lower is better)
Translates to: RGPLTQFHEVGT*SRARFGERDKS
Trigger: ACTCTTATCTCTTTCCCCGAAGCGGGCTCTGCTCAAAGTCCCCACCTCGTGGAACTGAGTGAGAGGACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393315.5
ENST00000422067.2
CDS GCA 72 bp CTGAAGGTCTCGGGATCTTGCTTCCCCAAAAGCATCTaGTGGACCAGCCAGACTGAAACACAAGCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: LKVSGSCFPKSI*WTSQTETQAPA
Trigger: TGCCGGAGCTTGTGTTTCAGTCTGGCTGGTCCAGCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS CCA 72 bp CTGAGATGGTCACGAGCAGGGAGTAGGATCTCTGTGTaGCAGACAGTCCATACTCGCCATCACAGCACCATC +
Preference number: 6 (lower is better)
Translates to: LRWSRAGSRISV*QTVHTRHHSTI
Trigger: GATGGTGCTGTGATGGCGAGTATGGACTGTCTGCCACACAGAGATCCTACTCCCTGCTCGTGACCATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 72 bp GTTACACTGCGAGGTGACTCTGAAGGTCTCGGGATCTaGCTTCCCCAAAAGCATCTGCTGGACCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: VTLRGDSEGLGI*LPQKHLLDQPD
Trigger: GTCTGGCTGGTCCAGCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTCAGAGTCACCTCGCAGTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS CAA 72 bp TACAGGGCATTCCTGCTCCTAACCAACCTGCAGCATTaGGGCCAACATCTGAGGGTGTCAGAGCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: YRAFLLLTNLQH*GQHLRVSELPG
Trigger: TCCTGGGAGCTCTGACACCCTCAGATGTTGGCCCAAATGCTGCAGGTTGGTTAGGAGCAGGAATGCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS GCA 72 bp TTACACTGCGAGGTGACTCTGAAGGTCTCGGGATCTTaGTTCCCCAAAAGCATCTGCTGGACCAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: LHCEVTLKVSGS*FPKSICWTSQT
Trigger: AGTCTGGCTGGTCCAGCAGATGCTTTTGGGGAAGCAAGATCCCGAGACCTTCAGAGTCACCTCGCAGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS CCA 72 bp TTTCTCCCCTGCCACAGATGCACCCACACATGTCTGTaGACCTGTGCTCCATCACCTAAACCAAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: FLPCHRCTHTCL*TCAPSPKPRQL
Trigger: AAGCTGCCTTGGTTTAGGTGATGGAGCACAGGTCCACAGACATGTGTGGGTGCATCTGTGGCAGGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS CAA 72 bp GAGGCCAAGGCCAATGGGTCACATGAGGTCAGAAGTTaGGGACCAGCTTGGGCAACATGGCGGAAAACTTGT +
Preference number: 6 (lower is better)
Translates to: EAKANGSHEVRS*GPAWATWRKTC
Trigger: ACAAGTTTTCCGCCATGTTGCCCAAGCTGGTCCCAAACTTCTGACCTCATGTGACCCATTGGCCTTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS TCA 72 bp TTCCTTAAAACTCCTGGGCGGAGGAAGGGAGTCCTGTaGAGTTGGGAGACCTGGGTTCAAGGTGTCCTACAA +
Preference number: 6 (lower is better)
Translates to: FLKTPGRRKGVL*SWETWVQGVLQ
Trigger: TTGTAGGACACCTTGAACCCAGGTCTCCCAACTTCACAGGACTCCCTTCCTCCGCCCAGGAGTTTTAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393319.7
CDS GCA 72 bp CGGGTAGAAGTCATCTCTACAGGCTACAGGTTACACTaGGAGGTGACTCTGAAGGTCTCGGGATCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: RVEVISTGYRLH*EVTLKVSGSCF
Trigger: GAAGCAAGATCCCGAGACCTTCAGAGTCACCTCGCAGTGTAACCTGTAGCCTGTAGAGATGACTTCTACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393315.5
CDS CCA 72 bp TCTGTTTCAGCAGCTCCTTGCTCTCCTTCTTTTCCGTaGACCGGAACACCTCACAGTCCTCCAGTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SVSAAPCSPSFP*TGTPHSPPVPS
Trigger: AGAAGGAACTGGAGGACTGTGAGGTGTTCCGGTCCACGGAAAAGAAGGAGAGCAAGGAGCTGCTGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274773.12
ENST00000393315.5
CDS CCA 72 bp CTTTATTCTTCATCTCAGAAGAGACTGTGGTTGGCTTaGGGCCAGGCACATTGCTACACCTGCTCAGCGTGC +
Preference number: 6 (lower is better)
Translates to: LYSSSQKRLWLA*GQAHCYTCSAC
Trigger: GCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CCA 72 bp CCAGACTTTATTCTTCATCTCAGAAGAGACTGTGGTTaGCTTGGGGCCAGGCACATTGCTACACCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: PDFILHLRRDCG*LGARHIATPAQ
Trigger: CTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CAA 72 bp ACTTTATTCTTCATCTCAGAAGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTACACCTGCTCAGCGTG +
Preference number: 6 (lower is better)
Translates to: TLFFISEETVVG*GPGTLLHLLSV
Trigger: CACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS TCA 72 bp GGTTGCAGTGAGCAGAGATCAGGCCACTGTACTCCATaGTCTCACTCCAGAGTAAGACCCTGTCTCAGAAAA +
Preference number: 6 (lower is better)
Translates to: GCSEQRSGHCTP*SHSRVRPCLRK
Trigger: TTTTCTGAGACAGGGTCTTACTCTGGAGTGAGATCATGGAGTACAGTGGCCTGATCTCTGCTCACTGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 72 bp TCCAGACTTTATTCTTCATCTCAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACATTGCTACACCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRLYSSSQKRLW*AWGQAHCYTCS
Trigger: TGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CAA 90 bp GAGAAACATTCCAGACTTTATTCTTCATCTCAGAAGAGACTGTGGTaGGCTTGGGGCCAGGCACATTGCTACACCTGCTCAGCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: EKHSRLYSSSQKRLW*AWGQAHCYTCSACF
Trigger: AAAGCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGGAATGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS TCA 72 bp TCACTCAGGTGTTTTAGGTGGCACCCAGACACACTCTaGCTTAGCTCAGACATCAGCATCAGGAATATGTGC +
Preference number: 6 (lower is better)
Translates to: SLRCFRWHPDTL*LSSDISIRNMC
Trigger: GCACATATTCCTGATGCTGATGTCTGAGCTAAGTCAGAGTGTGTCTGGGTGCCACCTAAAACACCTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CAA 90 bp ACATTCCAGACTTTATTCTTCATCTCAGAAGAGACTGTGGTTGGCTaGGGGCCAGGCACATTGCTACACCTGCTCAGCGTGCTTTTGAAT +
Preference number: 6 (lower is better)
Translates to: TFQTLFFISEETVVG*GPGTLLHLLSVLLN
Trigger: ATTCAAAAGCACGCTGAGCAGGTGTAGCAATGTGCCTGGCCCCAAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274773.12
ENST00000393315.5
ENST00000393319.7
ENST00000422067.2
CDS CCA 72 bp AATGTGTGGGCCTGGTTTGAACCCCAATTCAACAGATaGGGATATTTGAATGCTAGACATTGGAAAGAATCA +
Preference number: 6 (lower is better)
Translates to: NVWAWFEPQFNR*GYLNARHWKES
Trigger: TGATTCTTTCCAATGTCTAGCATTCAAATATCCCCATCTGTTGAATTGGGGTTCAAACCAGGCCCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp AACAAGTACTTACTGAAATCAAACAAATGCAATGTGTaGGCCTGGTTTGAACCCCAATTCAACAGATGGGGA +
Preference number: 6 (lower is better)
Translates to: NKYLLKSNKCNV*AWFEPQFNRWG
Trigger: TCCCCATCTGTTGAATTGGGGTTCAAACCAGGCCCACACATTGCATTTGTTTGATTTCAGTAAGTACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp TACTTACTGAAATCAAACAAATGCAATGTGTGGGCCTaGTTTGAACCCCAATTCAACAGATGGGGATATTTG +
Preference number: 6 (lower is better)
Translates to: YLLKSNKCNVWA*FEPQFNRWGYL
Trigger: CAAATATCCCCATCTGTTGAATTGGGGTTCAAACCAGGCCCACACATTGCATTTGTTTGATTTCAGTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504241.1
CDS CCA 72 bp CAATTCAACAGATGGGGATATTTGAATGCTAGACATTaGAAAGAATCATTAATCTGTCCAGGTGTGAGGACT +
Preference number: 6 (lower is better)
Translates to: QFNRWGYLNARH*KESLICPGVRT
Trigger: AGTCCTCACACCTGGACAGATTAATGATTCTTTCCAATGTCTAGCATTCAAATATCCCCATCTGTTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504241.1