RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM47 (Homo sapiens)

Ensembl gene IDs: ENSG00000132481

Ensembl transcript IDs: ENST00000254816.6, ENST00000585333.1, ENST00000586495.1, ENST00000587339.2, ENST00000587774.1, ENST00000592942.1, ENST00000593089.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCACCCTGGGAGCGGCCTAGCATGGCAGCTTCCCCCTCCTCGATaGAGCCCAGCACCTGGGTCTGGAAGCCCTGCAGGGCGGCCGCAG +
Preference number: 1 (lower is better)
Translates to: GHPGSGLAWQLPPPR*SPAPGSGSPAGRPQ
Trigger: CTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCCAGGGTGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp GGAGTGGGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGTaGGGAGAAGTCTTCGGCCATGACCCCCATGCTGACCCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: GVGVAAQPAAVVGLL*GEVFGHDPHADPAL
Trigger: GAGGGCTGGGTCAGCATGGGGGTCATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp GCCCAGCACCTGGGTCTGGAAGCCCTGCAGGGCGGCCGCAGCATCTaGAAACAGCCGGCTCACCCTCTCCCGCTCTGCTACGGCTGCACT +
Preference number: 1 (lower is better)
Translates to: AQHLGLEALQGGRSI*KQPAHPLPLCYGCT
Trigger: AGTGCAGCCGTAGCAGAGCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp CGGAGAAGCTGCGTCCATTCCACTGCAGGCAGCAGGAGTGGGCGTTaGGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGTGGGGAGAAGT +
Preference number: 1 (lower is better)
Translates to: RRSCVHSTAGSRSGR*GPAGRGRRALVGRS
Trigger: ACTTCTCCCCACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTGCAGTGGAATGGACGCAGCTTCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR TCA 90 bp GCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTGCTCCCACTGGTTaGCGCAGGCCACGGCCAGCATGTCTCTCACTGCACGGACAGCTT +
Preference number: 1 (lower is better)
Translates to: AHPRCHPAPSAAPTG*RRPRPACLSLHGQL
Trigger: AAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp CCCGGCGGGGCCGGGAGGCCTTCAGCCTCCGCAGGAGGCTCATCTTaGCGTCCCGTACAGCATAGAAGGCCAAGGCACGGTCAGCGTATT +
Preference number: 1 (lower is better)
Translates to: PGGAGRPSASAGGSS*RPVQHRRPRHGQRI
Trigger: AATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGAAGGCCTCCCGGCCCCGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp AGCATGGCAGCTTCCCCCTCCTCGATGAAGCCCAGCACCTGGGTCTaGAAGCCCTGCAGGGCGGCCGCAGCATCTGCAAACAGCCGGCTC +
Preference number: 1 (lower is better)
Translates to: SMAASPSSMKPSTWV*KPCRAAAASANSRL
Trigger: GAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGCTGCCATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp CGGCCTAGCATGGCAGCTTCCCCCTCCTCGATGAAGCCCAGCACCTaGGTCTGGAAGCCCTGCAGGGCGGCCGCAGCATCTGCAAACAGC +
Preference number: 1 (lower is better)
Translates to: RPSMAASPSSMKPST*VWKPCRAAAASANS
Trigger: GCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGCTGCCATGCTAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp TGTGGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTGCTCCCACTaGTTGACGCAGGCCACGGCCAGCATGTCTCTCACTGCACGGACA +
Preference number: 1 (lower is better)
Translates to: CGPSSLPPGPLSCSH*LTQATASMSLTART
Trigger: TGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR TCA 90 bp GCAGGCCACGGCCAGCATGTCTCTCACTGCACGGACAGCTTGGGATaGTTTGGTGAAGCTGAGCTCCCTCGGGGGTCCAGGCCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: AGHGQHVSHCTDSLG*FGEAELPRGSRPRA
Trigger: GGCCCTGGGCCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp TCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTaGTCCCACTGGTTGACGCAGGCCACGGCCAGCATGTCTCTCACT +
Preference number: 1 (lower is better)
Translates to: SSFCGPSSLPPGPLS*SHWLTQATASMSLT
Trigger: AGTGAGAGACATGCTGGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp AGAGGAGGCAGCTTCCTGGAGCAGAGACGGCAGCAGGAGCGCCCGTaGCCGGCATCACCTCCTCTTCAGCACGGATATGCAGGACTTCTT +
Preference number: 1 (lower is better)
Translates to: RGGSFLEQRRQQERP*PASPPLQHGYAGLL
Trigger: AAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCACGGGCGCTCCTGCTGCCGTCTCTGCTCCAGGAAGCTGCCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp TTGACGCAGGCCACGGCCAGCATGTCTCTCACTGCACGGACAGCTTaGGATGATTTGGTGAAGCTGAGCTCCCTCGGGGGTCCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: LTQATASMSLTARTA*DDLVKLSSLGGPGP
Trigger: TGGGCCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGCGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR TCA 90 bp GTGCCCGGCATCACCTCCTCTTCAGCACGGATATGCAGGACTTCTTaGGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGA +
Preference number: 1 (lower is better)
Translates to: VPGITSSSARICRTS*GARSASGRPHSPGR
Trigger: TCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 90 bp CTCCTCTTCAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTaGAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGT +
Preference number: 1 (lower is better)
Translates to: LLFSTDMQDFLRGPI*KWASTLSRKKAGLS
Trigger: ACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp TTCAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTaGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGTGG +
Preference number: 1 (lower is better)
Translates to: FSTDMQDFLRGPICK*ASTLSRKKAGLSLW
Trigger: CCACAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 90 bp GGGGTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTaGAAGCCTCTAGAAATGAGAAGGCTGGGTGTGTGGGACTCATGC +
Preference number: 1 (lower is better)
Translates to: GVLLPGRGKAECIKR*KPLEMRRLGVWDSC
Trigger: GCATGAGTCCCACACACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR CCA 90 bp TGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGTGTaGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: CIKRWKPLEMRRLGV*DSCWCLPRRRRGPR
Trigger: TCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR GCA 90 bp CACCCTCTTGACACCTTTGGTTCCAAACAGCTGCAGGAACTTGTCTaGTGTGTCGCTGTCCAAATCCACAATATAGGCAAACTTGAGGAA +
Preference number: 1 (lower is better)
Translates to: HPLDTFGSKQLQELV*CVAVQIHNIGKLEE
Trigger: TTCCTCAAGTTTGCCTATATTGTGGATTTGGACAGCGACACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp CAGGCAGCAGGAGTGGGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGGGCGGCCGCAGCATCTaGAAACAGCCGGCTCACCCT +
Preference number: 2 (lower is better)
Translates to: QAAGVGVAAQPAAVVGLLGGRSI*KQPAHP
Trigger: AGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCC...CAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 90 bp GCAGGAGTGGGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTaGTGGGGAGAAGTCTTCGGCCATGACCCCCATGCTGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: AGVGVAAQPAAVVGL*WGEVFGHDPHADPA
Trigger: GGCTGGGTCAGCATGGGGGTCATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 90 bp GGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTGCTCCCACTGGTaGACGCAGGCCACGGCCAGCATGTCTCTCACTGCACGGACAGCT +
Preference number: 2 (lower is better)
Translates to: GPSSLPPGPLSCSHW*TQATASMSLTARTA
Trigger: AGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR TCA 90 bp CAGGCAGCAGGAGTGGGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGCTGCAGGAAGCTGACTaGGTCAGCTTCAGGGACCTG +
Preference number: 2 (lower is better)
Translates to: QAAGVGVAAQPAAVVGLLLQEAD*VSFRDL
Trigger: CAGGTCCCTGAAGCTGACTCAGTCAGCTTCCTGCAG...CAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp CCGGCGGGGCCGGGAGGCCTTCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTGGGACTCATGCTGGTaGCTTCCCAGACGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: PAGPGGLQPPQEAHLAVPWDSCW*LPRRRR
Trigger: TCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCA...CGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGAAGGCCTCCCGGCCCCGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 90 bp GGCTCAGCATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTaGCCACCCGGCCCCCTCAGCTGCTCCCACTGGTTGACGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GSASASESSFCGPSS*PPGPLSCSHWLTQA
Trigger: GGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp ATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTCAGGGGAACAGGGTCTaGGGGTCCTCCTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: ISFRVQLLWPILVATRPPQGNRV*GSSCLG
Trigger: TCCCAGGCAGGAGGACCCCCAGACCCTGTTCCCCTG...AGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 90 bp GCCACGGCCAGCATGTCTCTCACTGCACGGACAGCTTGGGATGATTaGGTGAAGCTGAGCTCCCTCGGGGGTCCAGGCCCAGGGCCACAC +
Preference number: 2 (lower is better)
Translates to: ATASMSLTARTAWDD*VKLSSLGGPGPGPH
Trigger: GTGTGGCCCTGGGCCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp TGGGGCTCAGCATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTaGTCCCACTGGTTGACGCAG +
Preference number: 2 (lower is better)
Translates to: WGSASASESSFCGPSSLPPGPLS*SHWLTQ
Trigger: CTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGG...TGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTGAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR TCA 90 bp AGGCTTGAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGCTTCAGGGACCTGGCTaGGATTCTGGCGGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: RLESVGEEPRKVTVQAALLQGPG*DSGGLG
Trigger: GCCGAGCCCGCCAGAATCTCAGCCAGGTCCCTGAAG...CAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTCAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp TCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGTGGGTCTGGAAGCCCTaGAGGGCGGCCGCAGCATCT +
Preference number: 2 (lower is better)
Translates to: SASAGGSSCRPVQHRRPRWVWKP*RAAAAS
Trigger: AGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCA...CCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp GAGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTCCTCCCAGTAGTAGGTaGCTCGGTCCAGGGCACCCT +
Preference number: 2 (lower is better)
Translates to: EGPDLQVGVHTLQEEGRLPPSSR*LGPGHP
Trigger: AGGGTGCCCTGGACCGAGGCACCTACTACTGGGAGG...AAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp TCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGGGGAGCGGCCTAGCATaGCAGCTTCCCCCTCCTCGA +
Preference number: 2 (lower is better)
Translates to: SASAGGSSCRPVQHRRPRGSGLA*QLPPPR
Trigger: TCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCC...CCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR TCA 90 bp GAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGGAAGGGGGAGCCTCCAGCCCATaGAACCAGACGGAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: ESVGEEPRKVTVQAALEGGASSP*NQTEKL
Trigger: CAGCTTCTCCGTCTGGTTTCATGGGCTGGAGGCTCC...CCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp CAGCATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCGGGGTTAGGGTAGCTTaGAGCTGTCCCAGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: QHQLPSPASVAHPRCHPAGVRVA*SCPSCS
Trigger: GCTACAGCTGGGACAGCTCCAAGCTACCCTAACCCC...GGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp GAGCGCCCGTGCCCGGCATCACCTCCTCTTCAGCACGGATATGCAGGACTTCTTGGGCCACTGTGCGCCTaGACTGTGCAATGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: ERPCPASPPLQHGYAGLLGPLCA*TVQCQH
Trigger: GTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCC...AAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCACGGGCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 90 bp CGTGCCCGGCATCACCTCCTCTTCAGCACGGATATGCAGGACTTCTaGAGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RARHHLLFSTDMQDF*RGPICKWASTLSRK
Trigger: CTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp AGGCTTGAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RLESVGEEPRKVTVQAALCAPGL*NASTQL
Trigger: GAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACA...CAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp GAGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGTGTGGGACTCATGCTaGTGCCTTCCCAGACGAAGG +
Preference number: 2 (lower is better)
Translates to: EGPDLQVGVHTLQEEGRLVWDSC*CLPRRR
Trigger: CCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACAC...AAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp ATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTAGAAGGCTGGGTGTGTaGGACTCATGCTGGTGCCTT +
Preference number: 2 (lower is better)
Translates to: ISFRVQLLWPILVATRPPRRLGV*DSCWCL
Trigger: AAGGCACCAGCATGAGTCCCACACACCCAGCCTTCT...AGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp GGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTGGTGTGTGGGACTCATaGTGGTGCCTTCCCAGACGA +
Preference number: 2 (lower is better)
Translates to: GPICKWASTLSRKKAGLSGVWDS*WCLPRR
Trigger: TCGTCTGGGAAGGCACCAGCATGAGTCCCACACACC...ACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp CCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCGAGTCCAGCTTCTGTaGCCCATCCTCGTTGCCACC +
Preference number: 2 (lower is better)
Translates to: PWELHSPRGSYSRGLGAQRVQLL*PILVAT
Trigger: GGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCG...CTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGTCTGGGGGTCCTCCTaGCTGGGAGAGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLVWGSS*LGEGRL
Trigger: CAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGAC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR GCA 90 bp CCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCACCCTCTCCCGCTCTaGTACGGCTGCACTCTTGAT +
Preference number: 2 (lower is better)
Translates to: PWELHSPRGSYSRGLGAQHPLPL*YGCTLD
Trigger: ATCAAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTG...CTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACAGGGGAACAGGGTCTaGGGGTCCTCCTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLQGNRV*GSSCLG
Trigger: TCCCAGGCAGGAGGACCCCCAGACCCTGTTCCCCTG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR CCA 90 bp ATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTACTGCACGGACAGCTTaGGATGATTTGGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: ISFRVQLLWPILVATRPPTARTA*DDLVKL
Trigger: CAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGT...AGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR TCA 90 bp AGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGGACACAGCACCCTCTTaGCACCTTTGGTTCCAAACA +
Preference number: 2 (lower is better)
Translates to: RGPICKWASTLSRKKAGLDTAPS*HLWFQT
Trigger: TGTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTC...CAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp CTCCAGCCCATGAAACCAGACGGAGAAGCTGCGTCCATTCCACTGCAGGCAGCAAGTGCCAGCAGCTCCTaGAGGAAGCTGACTGAGTCA +
Preference number: 2 (lower is better)
Translates to: LQPMKPDGEAASIPLQAASASSS*RKLTES
Trigger: TGACTCAGTCAGCTTCCTGCAGGAGCTGCTGGCACT...TGCTGCCTGCAGTGGAATGGACGCAGCTTCTCCGTCTGGTTTCATGGGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp TCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGCTGCAGGAACTTGTCTaGTGTGTCGCTGTCCAAATC +
Preference number: 2 (lower is better)
Translates to: SASAGGSSCRPVQHRRPRLQELV*CVAVQI
Trigger: GATTTGGACAGCGACACAGCAGACAAGTTCCTGCAG...CCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGGCCTGGACTGTGCAATaGCAGCACCCAGCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRAWTVQ*QHPARP
Trigger: TGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGC...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGGGTGTGTGGGACTCATaGTGGTGCCTTCCCAGACGA +
Preference number: 2 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRGVWDS*WCLPRR
Trigger: TCGTCTGGGAAGGCACCAGCATGAGTCCCACACACC...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR TCA 90 bp TCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGCACGGTCAGCGTATTCCACAATATAGGCAAACTTaGGGAAATAGTCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SSCRPVQHRRPRHGQRIPQYRQT*GNSPWE
Trigger: CTCCCAGGGACTATTTCCTCAAGTTTGCCTATATTG...TGGAATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGTGGGACTCATGCTGGTaGCTTCCCAGACGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGWDSCW*LPRRRR
Trigger: TCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCA...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR CCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGTGTGGGACTCATGCTaGTGCCTTCCCAGACGAAGG +
Preference number: 2 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLVWDSC*CLPRRR
Trigger: CCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACAC...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGAGAAGGCTGGGTGTGTaGGACTCATGCTGGTGCCTT +
Preference number: 2 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGRRLGV*DSCWCL
Trigger: AAGGCACCAGCATGAGTCCCACACACCCAGCCTTCT...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAGTGTATAAAAAGGTaGAAGCCTCTAGAAATGAGA +
Preference number: 2 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLECIKR*KPLEMR
Trigger: TCTCATTTCTAGAGGCTTCCACCTTTTTATACACTC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR GCA 72 bp TGCGTCCATTCCACTGCAGGCAGCAGGAGTGGGCGTTaGGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: CVHSTAGSRSGR*GPAGRGRRALV
Trigger: CACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTGCAGTGGAATGGACGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 72 bp CTGGGTCTGGAAGCCCTGCAGGGCGGCCGCAGCATCTaGAAACAGCCGGCTCACCCTCTCCCGCTCTGCTAC +
Preference number: 3 (lower is better)
Translates to: LGLEALQGGRSI*KQPAHPLPLCY
Trigger: GTAGCAGAGCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp GCTTCCCCCTCCTCGATGAAGCCCAGCACCTGGGTCTaGAAGCCCTGCAGGGCGGCCGCAGCATCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: ASPSSMKPSTWV*KPCRAAAASAN
Trigger: GTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp ATGGCAGCTTCCCCCTCCTCGATGAAGCCCAGCACCTaGGTCTGGAAGCCCTGCAGGGCGGCCGCAGCATCT +
Preference number: 3 (lower is better)
Translates to: MAASPSSMKPST*VWKPCRAAAAS
Trigger: AGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCATCGAGGAGGGGGAAGCTGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 72 bp GCCGGGAGGCCTTCAGCCTCCGCAGGAGGCTCATCTTaGCGTCCCGTACAGCATAGAAGGCCAAGGCACGGT +
Preference number: 3 (lower is better)
Translates to: AGRPSASAGGSS*RPVQHRRPRHG
Trigger: ACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGAAGGCCTCCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp TTGGGGCTCAGCATCAGCTTCCGAGTCCAGCTTCTGTaGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: LGLSISFRVQLL*PILVATRPPQL
Trigger: CAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTGAGCCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 72 bp AGCTTCCTGGAGCAGAGACGGCAGCAGGAGCGCCCGTaGCCGGCATCACCTCCTCTTCAGCACGGATATGCA +
Preference number: 3 (lower is better)
Translates to: SFLEQRRQQERP*PASPPLQHGYA
Trigger: TGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCACGGGCGCTCCTGCTGCCGTCTCTGCTCCAGGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CAA 90 bp GGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTGCTACGGCTGCACTCTaGATGAGGGCCACTGTGCGC +
Preference number: 3 (lower is better)
Translates to: GPICKWASTLSRKKAGLSATAAL*MRATVR
Trigger: GCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGC...ACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 72 bp TGCACTCTTGATGAGGGCCACTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTCGTCCATGCGGTCCTC +
Preference number: 3 (lower is better)
Translates to: CTLDEGHCAPGL*NASTQLVHAVL
Trigger: GAGGACCGCATGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CAA 90 bp CCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGGCGGTCGTAGGGCTCTaGTGGGGAGAAGTCTTCGGC +
Preference number: 3 (lower is better)
Translates to: PICKWASTLSRKKAGLSLAVVGL*WGEVFG
Trigger: GCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGC...CAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR TCA 72 bp GGCCAGCATGTCTCTCACTGCACGGACAGCTTGGGATaGTTTGGTGAAGCTGAGCTCCCTCGGGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: GQHVSHCTDSLG*FGEAELPRGSR
Trigger: CCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp GCCACGGCCAGCATGTCTCTCACTGCACGGACAGCTTaGGATGATTTGGTGAAGCTGAGCTCCCTCGGGGGT +
Preference number: 3 (lower is better)
Translates to: ATASMSLTARTA*DDLVKLSSLGG
Trigger: ACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCTGGCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CAA 90 bp AGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGGGACACAGCACCCTCTaGACACCTTTGGTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RGPICKWASTLSRKKAGLGHSTL*TPLVPN
Trigger: GTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTCC...CAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR GCA 72 bp CCTCTAGAAATGAGAAGGCTGGGTGTGTGGGACTCATaGTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: PLEMRRLGVWDS*WCLPRRRRGPR
Trigger: TCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCCAGCCTTCTCATTTCTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR GCA 72 bp AGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTaGAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: STDMQDFLRGPI*KWASTLSRKKA
Trigger: TGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp CTAGAAATGAGAAGGCTGGGTGTGTGGGACTCATGCTaGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: LEMRRLGVWDSC*CLPRRRRGPRG
Trigger: TCCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCCAGCCTTCTCATTTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR CCA 72 bp GATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTaGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: DMQDFLRGPICK*ASTLSRKKAGL
Trigger: CAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR-3UTR CAA 90 bp CCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGACCCTCTTGACACCTTaGGTTCCAAACAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: PICKWASTLSRKKAGLSLTLLTP*VPNSCR
Trigger: CCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGT...CAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR TCA 72 bp GGGTCTGGGGGTCCTCCTGCCTGGGAGAGGGAAGGCTaGGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAG +
Preference number: 3 (lower is better)
Translates to: GSGGPPAWEREG*VYKKVEASRNE
Trigger: CTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR GCA 72 bp CACAGCACCCTCTTGACACCTTTGGTTCCAAACAGCTaGAGGAACTTGTCTGCTGTGTCGCTGTCCAAATCC +
Preference number: 3 (lower is better)
Translates to: HSTLLTPLVPNS*RNLSAVSLSKS
Trigger: GGATTTGGACAGCGACACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CCA 72 bp CTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTaGAAGCCTCTAGAAATGAGAAGGCTGGGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: LPGRGKAECIKR*KPLEMRRLGVW
Trigger: CCACACACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
3UTR GCA 72 bp GACACCTTTGGTTCCAAACAGCTGCAGGAACTTGTCTaGTGTGTCGCTGTCCAAATCCACAATATAGGCAAA +
Preference number: 3 (lower is better)
Translates to: DTFGSKQLQELV*CVAVQIHNIGK
Trigger: TTTGCCTATATTGTGGATTTGGACAGCGACACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAAAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp CAGGCAGCAGGAGTGGGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTTGCCGGAGCCCACCTCCTaGAGCGCGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QAAGVGVAAQPAAVVGLLPEPTS*SARSCS
Trigger: GGAGCAGGAGCGCGCGCTTCAGGAGGTGGGCTCCGG...CAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCTGCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp CCTGCAGGGCGGCCGCAGCATCTGCAAACAGCCGGCTCACCCTCTCCCGCTCTGGTGGCCCATCCTCGTTaGCACCCGGCCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PAGRPQHLQTAGSPSPALVAHPR*HPAPSA
Trigger: AGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCAC...CAGAGCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGGCCGCGGTGCTCCTGTaGGGCGCAGGCCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRAAVLL*GAGLAQ
Trigger: CTGTGCGAGGCCTGCGCCGCACAGGAGCACCGCGGC...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGCTCGGCTCAGGCGGCTGCGCTGTTCCTCCTGTCGCCGCAGGTCACCCTGGGCGAGTCCAGCTTCTGTaGCCCATCCTCGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: GLGSGGCAVPPVAAGHPGRVQLL*PILVAT
Trigger: GGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCG...CCCAGGGTGACCTGCGGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGCTCGGCTCAGGCGGCTGCGCTGTTCCTCCTGTCGCCGCAGGTCACCCTGGGCGGCGCTCAGGACTTTaGACTGCTCAGCCCGAGTGT +
Preference number: 4 (lower is better)
Translates to: GLGSGGCAVPPVAAGHPGRRSGL*TAQPEC
Trigger: ACACTCGGGCTGAGCAGTCCAAAGTCCTGAGCGCCG...CCCAGGGTGACCTGCGGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 72 bp GGCGTTGCGGCCCAGCCGGCCGCGGTCGTAGGGCTCTaGTGGGGAGAAGTCTTCGGCCATGACCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: GVAAQPAAVVGL*WGEVFGHDPHA
Trigger: AGCATGGGGGTCATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGCGGCCGGCTGGGCCGCAACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp CGCCGCAGGTCACCCTGGGAGCGGCCTAGCATGGCAGCTTCCCCCTCCTCGATGCCCTCGCCCAGCACCTaGTCACAATGGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RRRSPWERPSMAASPSSMPSPST*SQWVKR
Trigger: CCGCTTCACCCATTGTGAGCAGGTGCTGGGCGAGGG...CATCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCCAGGGTGACCTGCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp CGCCGCAGGTCACCCTGGGAGCGGCCTAGCATGGCAGCTTCCCCCTCCTCGATGCTGCGTCCATTCCACTaGAGGCAGCAGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RRRSPWERPSMAASPSSMLRPFH*RQQEWA
Trigger: CGCCCACTCCTGCTGCCTGCAGTGGAATGGACGCAG...CATCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCCAGGGTGACCTGCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp AAGCCCTGCAGGGCGGCCGCAGCATCTGCAAACAGCCGGCTCACCCTCTCCCGCTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KPCRAAAASANSRLTLSRCAPGL*NASTQL
Trigger: GAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACA...GCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCCCTGCAGGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp TGGCGGGCTCGGCTCAGGCGGCTGCGCTGTTCCTCCTGTCGCCGCAGGTCACCCAGTGCCAGCAGCTCCTaGAGGAAGCTGACTGAGTCA +
Preference number: 4 (lower is better)
Translates to: WRARLRRLRCSSCRRRSPSASSS*RKLTES
Trigger: TGACTCAGTCAGCTTCCTGCAGGAGCTGCTGGCACT...GGGTGACCTGCGGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGCTTCAGGGACCTGGCTaGGATTCTGGCGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRLQGPG*DSGGLG
Trigger: GCCGAGCCCGCCAGAATCTCAGCCAGGTCCCTGAAG...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp CCGGCGGGGCCGGGAGGCCTTCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGGACACAGCACCCTCTTaGCACCTTTGGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: PAGPGGLQPPQEAHLAVPDTAPS*HLWFQT
Trigger: TGTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTC...CGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGAAGGCCTCCCGGCCCCGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp TGGGGCTCAGCATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCATCGTGCGGGCCCAGGTaGGCGGGGCAAAAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WGSASASESSFCGPSSLPSCGPR*AGQKEA
Trigger: CGCCTCCTTTTGCCCCGCGCACCTGGGCCCGCACGA...TGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGATGCTGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp CTCCAGCCCATGAAACCAGACGGAGAAGCTGCGTCCATTCCACTGCAGGCAGCAAGCTCGTGGCCGCGGTaGTCCTGTGCGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQPMKPDGEAASIPLQAASSWPR*SCAAQA
Trigger: GGCCTGCGCCGCACAGGAGCACCGCGGCCACGAGCT...TGCTGCCTGCAGTGGAATGGACGCAGCTTCTCCGTCTGGTTTCATGGGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGGAAGGGCTCGGCTCAGGCGGCTaGGCTGTTCCTCCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: ESVGEEPRKVTVQAALEGLGSGG*AVPPVA
Trigger: GGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAG...CCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGCAGCAGGAGCGCCCGTaGCCGGCATCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRQQERP*PASPPL
Trigger: AAGAGGAGGTGATGCCGGGCACGGGCGCTCCTGCTG...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGCTCAGCTGCTCCCACTaGTTGACGCAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRLSCSH*LTQATA
Trigger: GGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAG...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGCCCTCGCCCAGCACCTaGTCACAATGGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRPSPST*SQWVKR
Trigger: CCGCTTCACCCATTGTGAGCAGGTGCTGGGCGAGGG...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CGCCGCAGGTCACCCTGGGAGCGGCCTAGCATGGCAGCTTCCCCCTCCTCGATGTGGGACTCATGCTGGTaGCTTCCCAGACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRRSPWERPSMAASPSSMWDSCW*LPRRRR
Trigger: TCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCA...CATCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCCAGGGTGACCTGCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGTCGAGCGGCCGTAGGTaGCGCGGGCACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PWELHSPRGSYSRGLGAQSSGRR*RGHRLS
Trigger: GGAGAGCCTGTGCCCGCGCCACCTACGGCCGCTCGA...CTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp TCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGCACGGTCAGCGTATTCCACGCGTCGCAGCGCACTaGCTCTTCGCCCGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSCRPVQHRRPRHGQRIPRVAAH*LFARGP
Trigger: TGGCCCGCGGGCGAAGAGCCAGTGCGCTGCGACGCG...TGGAATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp GAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGGAAGGGTCTGGAAGGGGTCAATaGGGGAGGCCGGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: ESVGEEPRKVTVQAALEGSGRGQ*GRPGCH
Trigger: GTGGCATCCCGGCCTCCCCCATTGACCCCTTCCAGA...CCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GCTACGGCTGCACTCTTGATGAGGGCCACTGTGCGCCTGGACTGTGCAATGCCACCTCCCAGTAGTAGGTaGCTCGGTCCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ATAALLMRATVRLDCAMPPPSSR*LGPGHP
Trigger: AGGGTGCCCTGGACCGAGGCACCTACTACTGGGAGG...TGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp AGGCTTGAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGGGGCCACTGTGCGCCTaGACTGTGCAATGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLESVGEEPRKVTVQAALGPLCA*TVQCQH
Trigger: GTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCC...CAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTCAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGGGGAGCGGCCTAGCATaGCAGCTTCCCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PWELHSPRGSYSRGLGAQGSGLA*QLPPPR
Trigger: TCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCC...CTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp ATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTTCAGCTTCAGGGACCTaGCTGAGATTCTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ISFRVQLLWPILVATRPPSASGT*LRFWRA
Trigger: AGCCCGCCAGAATCTCAGCCAGGTCCCTGAAGCTGA...AGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTGGGCGTCCACGGCCCGATCTGCAAGTaGGCGTCCACACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QHGYAGLLEGPDLQVGVHGPICK*ASTLSR
Trigger: CCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCC...GTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp AGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGCTGCAGGAAGCTGACTaGGTCAGCTTCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: RGPICKWASTLSRKKAGLLQEAD*VSFRDL
Trigger: CAGGTCCCTGAAGCTGACTCAGTCAGCTTCCTGCAG...CAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGAGTGCCAGCAGCTCCTaGAGGAAGCTGACTGAGTCA +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRSASSS*RKLTES
Trigger: TGACTCAGTCAGCTTCCTGCAGGAGCTGCTGGCACT...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTGGGCGTCCACCTCAGGACTTTGGACTaGTCAGCCCGAGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QHGYAGLLEGPDLQVGVHLRTLD*SARVCP
Trigger: GGGGCACACTCGGGCTGAGCAGTCCAAAGTCCTGAG...GTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTATCGAGCGGCCGTAGGTaGCGCGGGCACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLSSGRR*RGHRLS
Trigger: GGAGAGCCTGTGCCCGCGCCACCTACGGCCGCTCGA...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACCCAGCACCTGGGTCTaGAAGCCCTGCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLPSTWV*KPCRAA
Trigger: GGCCGCCCTGCAGGGCTTCCAGACCCAGGTGCTGGG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCACTCAGCTGCTCCCACTaGTTGACGCAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: LGASLSKRFVLSRSWGSALSCSH*LTQATA
Trigger: GGCCGTGGCCTGCGTCAACCAGTGGGAGCAGCTGAG...TGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp TCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGAGCACCTGCTCACAATaGGTGAAGCGGGTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SASAGGSSCRPVQHRRPRSTCSQ*VKRVGD
Trigger: GTCGCCCACCCGCTTCACCCATTGTGAGCAGGTGCT...CCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACTCGGCTCAGGCGGCTaGGCTGTTCCTCCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLLGSGG*AVPPVA
Trigger: GGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGGAAGGGGCAGGAGGCTCATCTTaGCGTCCCGTACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: ESVGEEPRKVTVQAALEGAGGSS*RPVQHR
Trigger: TCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGC...CCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp TCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGCACGGTCAGCGTATTCCAGTCTGGGGGTCCTCCTaGCTGGGAGAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCRPVQHRRPRHGQRIPVWGSS*LGEGRL
Trigger: CAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGAC...TGGAATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CTCCAGCCCATGAAACCAGACGGAGAAGCTGCGTCCATTCCACTGCAGGCAGCAATGAAGCCCAGCACCTaGGTCTGGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPMKPDGEAASIPLQAAMKPST*VWKPCR
Trigger: CCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCAT...TGCTGCCTGCAGTGGAATGGACGCAGCTTCTCCGTCTGGTTTCATGGGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTGGGCGTCCACGGGGTTAGGGTAGCTTaGAGCTGTCCCAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QHGYAGLLEGPDLQVGVHGVRVA*SCPSCS
Trigger: GCTACAGCTGGGACAGCTCCAAGCTACCCTAACCCC...GTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587339.2
3UTR CAA 72 bp AGCATGTCTCTCACTGCACGGACAGCTTGGGATGATTaGGTGAAGCTGAGCTCCCTCGGGGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SMSLTARTAWDD*VKLSSLGGPGP
Trigger: TGGGCCTGGACCCCCGAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGTGAGAGACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGTCCACTGCCGTCCATaGCTCCGCGGCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGVHCRP*LRGRPG
Trigger: CCCTGGGCGGCCGCGGAGTCATGGACGGCAGTGGAC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR TCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGCAGATGGGGCAGCTaGAGGGTCCACTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGRWGS*RVHCRP
Trigger: TGGACGGCAGTGGACCCTTCAGCTGCCCCATCTGCC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR TCA 90 bp GAGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTATATGCAGGACTTCTTaGGGGGCCCGATCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: EGPDLQVGVHTLQEEGRLICRTS*GARSAS
Trigger: ACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATAT...AAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTCCACTCGCGCCACGATaGGGCCAGAGCGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGPLAPR*GQSAPR
Trigger: CCTGGGCGCGCTCTGGCCGCATCGTGGCGCGAGTGG...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGCCGCGGTGCTCCTGTaGGGCGCAGGCCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGAAVLL*GAGLAQ
Trigger: CTGTGCGAGGCCTGCGCCGCACAGGAGCACCGCGGC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGAGCTCGTGGCCGCGGTaGTCCTGTGCGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRSSWPR*SCAAQA
Trigger: GGCCTGCGCCGCACAGGAGCACCGCGGCCACGAGCT...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACACCCAGCTCGTCCATaGGGTCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLHPARP*GPPRRS
Trigger: TGAGCGCCGTGGAGGACCGCATGGACGAGCTGGGTG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGCGGCCGCAGCATCTaGAAACAGCCGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGGRSI*KQPAHP
Trigger: AGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTATGGGTCTGGAAGCCCTaGAGGGCGGCCGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLWVWKP*RAAAAS
Trigger: AGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCA...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTAGCAGGAGTGGGCGTTaGGGCCCAGCCGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGSRSGR*GPAGRG
Trigger: ACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCT...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGAGCAGGAGTGGGCGTTaGGGCCCAGCCGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRSRSGR*GPAGRG
Trigger: ACCGCGGCCGGCTGGGCCGCAACGCCCACTCCTGCT...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCATTGAGGGGCCCGATCTaGAAGTGGGCGTCCACACTC +
Preference number: 4 (lower is better)
Translates to: LGASLSKRFVLSRSWGSALRGPI*KWASTL
Trigger: GAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAA...TGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp CCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGGGTGTGTGGGACTCATaGTGGTGCCTTCCCAGACGA +
Preference number: 4 (lower is better)
Translates to: PICKWASTLSRKKAGLSLGVWDS*WCLPRR
Trigger: TCGTCTGGGAAGGCACCAGCATGAGTCCCACACACC...CAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGCGCGTCGCAGCGCACTaGCTCTTCGCCCGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGRVAAH*LFARGP
Trigger: TGGCCCGCGGGCGAAGAGCCAGTGCGCTGCGACGCG...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGGAGCGGCCTAGCATaGCAGCTTCCCCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGSGLA*QLPPPR
Trigger: TCGAGGAGGGGGAAGCTGCCATGCTAGGCCGCTCCC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGACTGCACGGACAGCTTaGGATGATTTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRTARTA*DDLVKL
Trigger: CAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGT...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTGTCGTAGGGCTCTTGTaGGGAGAAGTCTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GPICKWASTLSRKKAGLSVVGLL*GEVFGH
Trigger: ATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGAC...ACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp TCAGCCTCCGCAGGAGGCTCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGACGGACAGCTTGGGATaGTTTGGTGAAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SASAGGSSCRPVQHRRPRTDSLG*FGEAEL
Trigger: GAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGT...CCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGCGGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp ATCAGCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTTGCCACCCGGCCCCCTTGGGAGAGGGAAGGCTaGGTGTATAAAAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ISFRVQLLWPILVATRPPWEREG*VYKKVE
Trigger: TTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCA...AGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGTGTGTGGGACTCATGCTGGTGCCTTCCCAGACGAAGGAGAGGGCCCAGAGGTTGGTTCCAAACAGCTaGAGGAACTTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GCVGLMLVPSQTKERAQRLVPNS*RNLSAV
Trigger: CACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAA...CCTCTGGGCCCTCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACCTCCCAGTAGTAGGTaGCTCGGTCCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLPPSSR*LGPGHP
Trigger: AGGGTGCCCTGGACCGAGGCACCTACTACTGGGAGG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTAGCGGCACCAGCTCGTaGCCGCGGTGCTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGSGTSS*PRCSCA
Trigger: CGCACAGGAGCACCGCGGCCACGAGCTGGTGCCGCT...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGCCCGATCTGCAAGTaGGCGTCCACACTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGPICK*ASTLSR
Trigger: CCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGAGAAGGCTGGGTGTGTaGGACTCATGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PICKWASTLSRKKAGLSLRRLGV*DSCWCL
Trigger: AAGGCACCAGCATGAGTCCCACACACCCAGCCTTCT...CAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGACTGCTCAGCCTCCTaGAGCGCGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGDCSAS*SARSCS
Trigger: GGAGCAGGAGCGCGCGCTTCAGGAGGCTGAGCAGTC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAACAGCGTGTGGTTCTTaGGGAGCTGAAGGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLTACGS*GAEGRR
Trigger: CCGACGGCCTTCAGCTCCGCAAGAACCACACGCTGT...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGAGCCCTGGCGGAGCTaGAGCAGCTCGGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGEPWRS*SSSDSV
Trigger: CACGCTGTCCGAGCTGCTGCAGCTCCGCCAGGGCTC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGTCGTGCGGGCCCAGGTaGGCGGGGCAAAAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLSCGPR*AGQKEA
Trigger: CGCCTCCTTTTGCCCCGCGCACCTGGGCCCGCACGA...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp TCATCTTGCCGTCCCGTACAGCATAGAAGGCCAAGGCACGGTCAGCGTATTCCACACCCTCTCCCGCTCTaGTACGGCTGCACTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SSCRPVQHRRPRHGQRIPHPLPL*YGCTLD
Trigger: ATCAAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTG...TGGAATACGCTGACCGTGCCTTGGCCTTCTATGCTGTACGGGACGGCAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTCCCGGCCCCCTCAGCTaGTCCCACTGGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGPGPLS*SHWLTQ
Trigger: CTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGG...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGCCCGGCCCCCTCAGCTaGTCCCACTGGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGPGPLS*SHWLTQ
Trigger: CTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGG...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGTGCTCAGCCCGAGTGTaGCCCCGGAGCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRCSARV*PRSPPP
Trigger: AGGAGGTGGGCTCCGGGGGCACACTCGGGCTGAGCA...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGTGGTTCTTGCGGAGCTaGAGGCCGTCGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRWFLRS*RPSGKG
Trigger: GCCCTTCCCCGACGGCCTTCAGCTCCGCAAGAACCA...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGGGCGGCCGCAGCATCTaGAAACAGCCGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRGGRSI*KQPAHP
Trigger: AGGGTGAGCCGGCTGTTTGCAGATGCTGCGGCCGCC...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGTGGCCCATCCTCGTTaGCACCCGGCCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLVAHPR*HPAPSA
Trigger: AGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCAC...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCTGCAGGAACTTGTCTaGTGTGTCGCTGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: PWELHSPRGSYSRGLGAQLQELV*CVAVQI
Trigger: GATTTGGACAGCGACACAGCAGACAAGTTCCTGCAG...CTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GAGCGCCCGTGCCCGGCATCACCTCCTCTTCAGCACGGATATGCAGGACTTCTTTTGGTTCCAAACAGCTaGAGGAACTTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERPCPASPPLQHGYAGLLLVPNS*RNLSAV
Trigger: CACAGCAGACAAGTTCCTGCAGCTGTTTGGAACCAA...AAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGATGCCGGGCACGGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR GCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGTGTGTGGGACTCATaGTGGTGCCTTCCCAGACGA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGVWDS*WCLPRR
Trigger: TCGTCTGGGAAGGCACCAGCATGAGTCCCACACACC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGGTCTGGGGGTCCTCCTaGCTGGGAGAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRVWGSS*LGEGRL
Trigger: CAGCCTTCCCTCTCCCAGGCAGGAGGACCCCCAGAC...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGACCTGGCTGAGATTCTaGCGGGCTCGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGTWLRF*RARLRR
Trigger: CCGCCTGAGCCGAGCCCGCCAGAATCTCAGCCAGGT...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTCTGACTGCACGGACAGCTTaGGATGATTTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PICKWASTLSRKKAGLSLTARTA*DDLVKL
Trigger: CAGCTTCACCAAATCATCCCAAGCTGTCCGTGCAGT...CAGACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGTGTGGGACTCATGCTaGTGCCTTCCCAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLVWDSC*CLPRRR
Trigger: CCTTCGTCTGGGAAGGCACCAGCATGAGTCCCACAC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCAGGGGAACAGGGTCTaGGGGTCCTCCTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRQGNRV*GSSCLG
Trigger: TCCCAGGCAGGAGGACCCCCAGACCCTGTTCCCCTG...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTAAGAGCCCCGCAAAGTaGCTGTCCAGGCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGKSPAK*LSRRLW
Trigger: CCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTT...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGAAGAGCCCCGCAAAGTaGCTGTCCAGGCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGKSPAK*LSRRLW
Trigger: CCAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTT...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGCACCCAGCTCGTCCATaGGGTCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLHPARP*GPPRRS
Trigger: TGAGCGCCGTGGAGGACCGCATGGACGAGCTGGGTG...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGTGGGTCTGGAAGCCCTaGAGGGCGGCCGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLWVWKP*RAAAAS
Trigger: AGATGCTGCGGCCGCCCTGCAGGGCTTCCAGACCCA...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTCTGCGTCCATTCCACTaGAGGCAGCAGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGLRPFH*RQQEWA
Trigger: CGCCCACTCCTGCTGCCTGCAGTGGAATGGACGCAG...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGGGCCACTGTGCGCCTaGACTGTGCAATGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGGPLCA*TVQCQH
Trigger: GTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTTCTGGAAGGGGTCAATaGGGGAGGCCGGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGSGRGQ*GRPGCH
Trigger: GTGGCATCCCGGCCTCCCCCATTGACCCCTTCCAGA...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGTCCAGGCGGCTCTaGAAGGGGTCAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRLSRRL*KGSMGE
Trigger: CTCCCCCATTGACCCCTTCCAGAGCCGCCTGGACAG...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGGAGCCTCCAGCCCATaGAACCAGACGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGGASSP*NQTEKL
Trigger: CAGCTTCTCCGTCTGGTTTCATGGGCTGGAGGCTCC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAATATGCAGGACTTCTTaGGGGGCCCGATCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLICRTS*GARSAS
Trigger: ACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATAT...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGCCTGGACTGTGCAATaGCAGCACCCAGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGAWTVQ*QHPARP
Trigger: TGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRCAPGL*NASTQL
Trigger: GAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACA...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGTTGAGGGGCCCGATCTaGAAGTGGGCGTCCACACTC +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGLRGPI*KWASTL
Trigger: GAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAA...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTCGAGTCCAGCTTCTGTaGCCCATCCTCGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGRVQLL*PILVAT
Trigger: GGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCG...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGAGCACCTGCTCACAATaGGTGAAGCGGGTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRSTCSQ*VKRVGD
Trigger: GTCGCCCACCCGCTTCACCCATTGTGAGCAGGTGCT...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGCTGTCCAGGCGGCTCTaGAAGGGGTCAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLLSRRL*KGSMGE
Trigger: CTCCCCCATTGACCCCTTCCAGAGCCGCCTGGACAG...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGACACAGCACCCTCTTaGCACCTTTGGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLDTAPS*HLWFQT
Trigger: TGTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGAGCCTCCAGCCCATaGAACCAGACGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLGASSP*NQTEKL
Trigger: CAGCTTCTCCGTCTGGTTTCATGGGCTGGAGGCTCC...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCGGCGCTCAGGACTTTaGACTGCTCAGCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRRRSGL*TAQPPE
Trigger: TTCAGGAGGCTGAGCAGTCCAAAGTCCTGAGCGCCG...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR CCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGATGAAGCCCAGCACCTaGGTCTGGAAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLMKPST*VWKPCR
Trigger: CCTGCAGGGCTTCCAGACCCAGGTGCTGGGCTTCAT...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGTCAGCTTCAGGGACCTaGCTGAGATTCTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGSASGT*LRFWRA
Trigger: AGCCCGCCAGAATCTCAGCCAGGTCCCTGAAGCTGA...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GAGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTGTATAAAAAGGTaGAAGCCTCTAGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: EGPDLQVGVHTLQEEGRLECIKR*KPLEMR
Trigger: TCTCATTTCTAGAGGCTTCCACCTTTTTATACACTC...AAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGGGGTTAGGGTAGCTTaGAGCTGTCCCAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGGVRVA*SCPSCS
Trigger: GCTACAGCTGGGACAGCTCCAAGCTACCCTAACCCC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGCTGCAGGAAGCTGACTaGGTCAGCTTCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLLQEAD*VSFRDL
Trigger: CAGGTCCCTGAAGCTGACTCAGTCAGCTTCCTGCAG...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTATGGGAGAGGGAAGGCTaGGTGTATAAAAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLWEREG*VYKKVE
Trigger: TTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCA...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGCACCCTCTCCCGCTCTaGTACGGCTGCACTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLHPLPL*YGCTLD
Trigger: ATCAAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTG...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGCAGGAGGCTCATCTTaGCGTCCCGTACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGAGGSS*RPVQHR
Trigger: TCTATGCTGTACGGGACGGCAAGATGAGCCTCCTGC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTTGGGACTCATGCTGGTaGCTTCCCAGACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGWDSCW*LPRRRR
Trigger: TCTCCTTCGTCTGGGAAGGCACCAGCATGAGTCCCA...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGTCGTAGGGCTCTTGTaGGGAGAAGTCTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGVVGLL*GEVFGH
Trigger: ATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGAC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGAGAAGGCTGGGTGTGTaGGACTCATGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRRRLGV*DSCWCL
Trigger: AAGGCACCAGCATGAGTCCCACACACCCAGCCTTCT...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTACAATATAGGCAAACTTaGGGAAATAGTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLQYRQT*GNSPWE
Trigger: CTCCCAGGGACTATTTCCTCAAGTTTGCCTATATTG...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR TCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGACGGACAGCTTGGGATaGTTTGGTGAAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLTDSLG*FGEAEL
Trigger: GAGCTCAGCTTCACCAAATCATCCCAAGCTGTCCGT...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR GCA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGCTGCAGGAACTTGTCTaGTGTGTCGCTGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLLQELV*CVAVQI
Trigger: GATTTGGACAGCGACACAGCAGACAAGTTCCTGCAG...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CCA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGAGTGTATAAAAAGGTaGAAGCCTCTAGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGECIKR*KPLEMR
Trigger: TCTCATTTCTAGAGGCTTCCACCTTTTTATACACTC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS GCA 90 bp CAGCGGGCCGCGCCTCCGGGTCCGCCGGCTCCACTCGCGCCACGATaGGGCCAGAGCGCGCCCAGGCAGGCGAGACAGAAGTTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: QRAAPPGPPAPLAPR*GQSAPRQARQKLWP
Trigger: CGGCCACAACTTCTGTCTCGCCTGCCTGGGCGCGCTCTGGCCGCATCGTGGCGCGAGTGGAGCCGGCGGACCCGGAGGCGCGGCCCGCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS TCA 90 bp GACTTTGGACTGCTCAGCCCGAGTGTGCCCCCGGAGCCCACCTCCTaGAGCGCGCGCTCCTGCTCCAGCGGCACCAGCTCGTGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: DFGLLSPSVPPEPTS*SARSCSSGTSSWPR
Trigger: CCGCGGCCACGAGCTGGTGCCGCTGGAGCAGGAGCGCGCGCTTCAGGAGGTGGGCTCCGGGGGCACACTCGGGCTGAGCAGTCCAAAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS TCA 90 bp TGGCGGAGCTGCAGCAGCTCGGACAGCGTGTGGTTCTTGCGGAGCTaGAGGCCGTCGGGGAAGGGCTCCTGGCACAGCGGGCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: WRSCSSSDSVWFLRS*RPSGKGSWHSGQRA
Trigger: GGCCCGCTGCCCGCTGTGCCAGGAGCCCTTCCCCGACGGCCTTCAGCTCCGCAAGAACCACACGCTGTCCGAGCTGCTGCAGCTCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS GCA 90 bp CCGAGCCCTGGCGGAGCTGCAGCAGCTCGGACAGCGTGTGGTTCTTaGGGAGCTGAAGGCCGTCGGGGAAGGGCTCCTGGCACAGCGGGC +
Preference number: 5 (lower is better)
Translates to: PSPGGAAAARTACGS*GAEGRRGRAPGTAG
Trigger: GCCCGCTGTGCCAGGAGCCCTTCCCCGACGGCCTTCAGCTCCGCAAGAACCACACGCTGTCCGAGCTGCTGCAGCTCCGCCAGGGCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS-3UTR CAA 90 bp TGGCGGGCTCGGCTCAGGCGGCTGCGCTGTTCCTCCTGTCGCCGCAGGTCACCCGCTACGGCTGCACTCTaGATGAGGGCCACTGTGCGC +
Preference number: 5 (lower is better)
Translates to: WRARLRRLRCSSCRRRSPATAAL*MRATVR
Trigger: GCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGC...GGGTGACCTGCGGCGACAGGAGGAACAGCGCAGCCGCCTGAGCCGAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS CCA 90 bp TGCCAGAGGTGCCTGCAGCCCAGGCTGGTGCCTTTCCTGAACGCCTaGGGGGCGTGCAGGCTGACTGGGTGTCTGCCTCGGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: CQRCLQPRLVPFLNA*GACRLTGCLPRVSD
Trigger: GTCAGAGACCCGAGGCAGACACCCAGTCAGCCTGCACGCCCCCCAGGCGTTCAGGAAAGGCACCAGCCTGGGCTGCAGGCACCTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS GCA 90 bp TGCTACGGCTGCACTCTTGATGAGGGCCACTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTCGTCCATGCGGTCCTCCACGGCGCT +
Preference number: 5 (lower is better)
Translates to: CYGCTLDEGHCAPGL*NASTQLVHAVLHGA
Trigger: AGCGCCGTGGAGGACCGCATGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254816.6
ENST00000586495.1
ENST00000587339.2
CDS GCA 90 bp GGAGGGGTGTTTGACCTTGATGAGGGCCACTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTCGTCCATGCGGTCCTCCACGGCGCT +
Preference number: 5 (lower is better)
Translates to: GGVFDLDEGHCAPGL*NASTQLVHAVLHGA
Trigger: AGCGCCGTGGAGGACCGCATGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGGTCAAACACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CCA 90 bp CTACACTCGGGTCCCAGGCCTTGCCAGGGGAGAGAAGGGGGTGACTaGGGAGTGGTATCTGTGCATCAGGTGGGACTGGAGTGGCCACGA +
Preference number: 5 (lower is better)
Translates to: LHSGPRPCQGREGGD*GVVSVHQVGLEWPR
Trigger: TCGTGGCCACTCCAGTCCCACCTGATGCACAGATACCACTCCCCAGTCACCCCCTTCTCTCCCCTGGCAAGGCCTGGGACCCGAGTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CCA 90 bp CATGCGGTCCTCCACGGCGCTCAGGACTTTGGACTGCTCAGCCTGTaGACAACACCCTCCATGAGTGTGAGGTCTGGCAGAGGCCACAGC +
Preference number: 5 (lower is better)
Translates to: HAVLHGAQDFGLLSL*TTPSMSVRSGRGHS
Trigger: GCTGTGGCCTCTGCCAGACCTCACACTCATGGAGGGTGTTGTCCACAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAGGACCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CCA 90 bp CAGCACCCAGCTCGTCCATGCGGTCCTCCACGGCGCTCAGGACTTTaGACTGCTCAGCCTGTGGACAACACCCTCCATGAGTGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: QHPARPCGPPRRSGL*TAQPVDNTLHECEV
Trigger: GACCTCACACTCATGGAGGGTGTTGTCCACAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAGGACCGCATGGACGAGCTGGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS-3UTR CAA 90 bp CAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTGGGCGTCCACACGGCGCTCAGGACTTaGGACTGCTCAGCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: QHGYAGLLEGPDLQVGVHTALRT*DCSARV
Trigger: CACTCGGGCTGAGCAGTCCAAAGTCCTGAGCGCCGT...GTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS GCA 90 bp AGCATCTGCAAACAGCCGGCTCACCCTCTCCCGCTCTGCTACGGCTaGACTCTGCACAGGACGACAGTAGAGGGGGCAATGAGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SICKQPAHPLPLCYG*TLHRTTVEGAMRAK
Trigger: CTTTGCCCTCATTGCCCCCTCTACTGTCGTCCTGTGCAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTGAGCCGGCTGTTTGCAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CCA 90 bp GAACTTCCTCCGGCGGGGAAGAGGCAGAGAGTAAGCCAGTTAGGTTaGGAGGTGGGCGGCGGAGGGGTGACTGCACAAGGAGGCATTAAG +
Preference number: 5 (lower is better)
Translates to: ELPPAGKRQRVSQLG*EVGGGGVTAQGGIK
Trigger: CTTAATGCCTCCTTGTGCAGTCACCCCTCCGCCGCCCACCTCCCAACCTAACTGGCTTACTCTCTGCCTCTTCCCCGCCGGAGGAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CCA 90 bp GGGGGTGACTGGGGAGTGGTATCTGTGCATCAGGTGGGACTGGAGTaGCCACGATGTCCCATAATATGCCAGAGGTGCCTGCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGDWGVVSVHQVGLE*PRCPIICQRCLQPR
Trigger: CCTGGGCTGCAGGCACCTCTGGCATATTATGGGACATCGTGGCCACTCCAGTCCCACCTGATGCACAGATACCACTCCCCAGTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS TCA 90 bp GTGGGCGGCGGAGGGGTGACTGCACAAGGAGGCATTAAGCTGTCCTaGGGATCACTGTTCCCAAAGAGCCTGCATCCACAGTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGGGGVTAQGGIKLS*GSLFPKSLHPQSRP
Trigger: AGGCCTGGACTGTGGATGCAGGCTCTTTGGGAACAGTGATCCTCAGGACAGCTTAATGCCTCCTTGTGCAGTCACCCCTCCGCCGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS GCA 90 bp TCTGTGCATCAGGTGGGACTGGAGTGGCCACGATGTCCCATAATATaGCAGAGGTGCCTGCAGCCCAGGCTGGTGCCTTTCCTGAACGCC +
Preference number: 5 (lower is better)
Translates to: SVHQVGLEWPRCPII*QRCLQPRLVPFLNA
Trigger: GGCGTTCAGGAAAGGCACCAGCCTGGGCTGCAGGCACCTCTGGCATATTATGGGACATCGTGGCCACTCCAGTCCCACCTGATGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS-3UTR CAA 90 bp AGGGGCCCGATCTGCAAGTGGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGGATATGCAGGACTTCTaGAGGGGCCCGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RGPICKWASTLSRKKAGLDMQDF*RGPICK
Trigger: CTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATC...CAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CAA 90 bp AGGCTTGAGTCTGTGGGTGAAGAGCCCCGCAAAGTGACTGTCCAGGCGGCTCTGACCCTCTTGACACCTTaGGTTCCAAACAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RLESVGEEPRKVTVQAALTLLTP*VPNSCR
Trigger: CCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGT...CAGAGCCGCCTGGACAGTCACTTTGCGGGGCTCTTCACCCACAGACTCAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS CCA 90 bp TTCAGCACGGATATGCAGGACTTCTTGAGGGGCCCGATCTGCAAGTaGGCGTCCACACTCTCCAGGAAGAAGGCAGGCTTGAGTAGCATA +
Preference number: 5 (lower is better)
Translates to: FSTDMQDFLRGPICK*ASTLSRKKAGLSSI
Trigger: TATGCTACTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGACGCCCACTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585333.1
CDS-3UTR CAA 90 bp CTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTTGGGGCTCAGCAACAGCTTGGGATGATTaGGTGAAGCTGAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGASLSKRFVLSRSWGSATAWDD*VKLSSL
Trigger: GAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGT...TGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS-3UTR CAA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGCTACGGCTGCACTCTaGATGAGGGCCACTGTGCGC +
Preference number: 5 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGATAAL*MRATVR
Trigger: GCGCACAGTGGCCCTCATCAAGAGTGCAGCCGTAGC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGGCGGTCGTAGGGCTCTaGTGGGGAGAAGTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGAVVGL*WGEVFG
Trigger: GCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGC...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp GGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGGCGGTCGTAGGGCTCTaGTGGGGAGAAGTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: GRGKAECIKRWKPLEMRRAVVGL*WGEVFG
Trigger: GCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGC...CCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp GTCCTCCTGCCTGGGAGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGGACACAGCACCCTCTaGACACCTTTGGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VLLPGRGKAECIKRWKPLGHSTL*TPLVPN
Trigger: GTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTCC...TAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCTCCCAGGCAGGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGATATGCAGGACTTCTaGAGGGGCCCGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGDMQDF*RGPICK
Trigger: CTTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGAACAGCTGCAGGAACTaGTCTGCTGTGTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLNSCRN*SAVSLS
Trigger: GGACAGCGACACAGCAGACAAGTTCCTGCAGCTGTT...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp CATCTACTACATGCCAGACACTATTCTAGAAACCTGGGAAAGGAGGGGTTAGGGACCCTCTTGACACCTTaGGTTCCAAACAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HLLHARHYSRNLGKEGLGTLLTP*VPNSCR
Trigger: CCTGCAGCTGTTTGGAACCAAAGGTGTCAAGAGGGT...CCCTAACCCCTCCTTTCCCAGGTTTCTAGAATAGTGTCTGGCATGTAGTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp GGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGGGTGGACACAGCACCCTCTaGACACCTTTGGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GKAECIKRWKPLEMRRLGGHSTL*TPLVPN
Trigger: GTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTCC...ACCCAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS-3UTR CAA 90 bp AGAGGGAAGGCTGAGTGTATAAAAAGGTGGAAGCCTCTAGAAATGAGAAGGCTGACAGCTTGGGATGATTaGGTGAAGCTGAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RGKAECIKRWKPLEMRRLTAWDD*VKLSSL
Trigger: GAGGGAGCTCAGCTTCACCAAATCATCCCAAGCTGT...CAGCCTTCTCATTTCTAGAGGCTTCCACCTTTTTATACACTCAGCCTTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587339.2
CDS GCA 72 bp GCGCCTCCGGGTCCGCCGGCTCCACTCGCGCCACGATaGGGCCAGAGCGCGCCCAGGCAGGCGAGACAGAAG +
Preference number: 6 (lower is better)
Translates to: APPGPPAPLAPR*GQSAPRQARQK
Trigger: CTTCTGTCTCGCCTGCCTGGGCGCGCTCTGGCCGCATCGTGGCGCGAGTGGAGCCGGCGGACCCGGAGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254816.6
CDS TCA 72 bp CTGCTCAGCCCGAGTGTGCCCCCGGAGCCCACCTCCTaGAGCGCGCGCTCCTGCTCCAGCGGCACCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LLSPSVPPEPTS*SARSCSSGTSS
Trigger: CGAGCTGGTGCCGCTGGAGCAGGAGCGCGCGCTTCAGGAGGTGGGCTCCGGGGGCACACTCGGGCTGAGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587339.2
CDS CCA 72 bp CGTGGGGCGGTGCCCACCTTCCGAGTCCAGCTTCTGTaGCCCATCCTCGTTGCCACCCGGCCCCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: RGAVPTFRVQLL*PILVATRPPQL
Trigger: CAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGGTGGGCACCGCCCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593089.1
CDS CAA 90 bp GGGCGGTGCCCACCTTCCGAGTCCAGCTTCTGTGGCCCATCCTCGTaGCCACCCGGCCCCCTCAGCTGCTCCCACTGGTTGACGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GRCPPSESSFCGPSS*PPGPLSCSHWLTQA
Trigger: GGCCTGCGTCAACCAGTGGGAGCAGCTGAGGGGGCCGGGTGGCAACGAGGATGGGCCACAGAAGCTGGACTCGGAAGGTGGGCACCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593089.1
CDS CCA 72 bp TGCCTGCAGCCCAGGCTGGTGCCTTTCCTGAACGCCTaGGGGGCGTGCAGGCTGACTGGGTGTCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: CLQPRLVPFLNA*GACRLTGCLPR
Trigger: CCGAGGCAGACACCCAGTCAGCCTGCACGCCCCCCAGGCGTTCAGGAAAGGCACCAGCCTGGGCTGCAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CCA 72 bp GCTCGTCCATGCGGTCCTCCACGGCGCTCAGGACTTTaGACTGCTCAGCCTCCTGAAGCGCGCGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: ARPCGPPRRSGL*TAQPPEARAPA
Trigger: AGCAGGAGCGCGCGCTTCAGGAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAGGACCGCATGGACGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254816.6
ENST00000587774.1
CDS CAA 72 bp TCCGGCGGGGAAGAGGCAGAGAGTAAGCCAGTTAGGTaGGGAGGTGGGCGGCGGAGGGGTGACTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: SGGEEAESKPVR*GGGRRRGDCTR
Trigger: CCTTGTGCAGTCACCCCTCCGCCGCCCACCTCCCAACCTAACTGGCTTACTCTCTGCCTCTTCCCCGCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS GCA 72 bp AAACAGCCGGCTCACCCTCTCCCGCTCTGCTACGGCTaGACTCTGCACAGGACGACAGTAGAGGGGGCAATG +
Preference number: 6 (lower is better)
Translates to: KQPAHPLPLCYG*TLHRTTVEGAM
Trigger: CATTGCCCCCTCTACTGTCGTCCTGTGCAGAGTGCAGCCGTAGCAGAGCGGGAGAGGGTGAGCCGGCTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CCA 72 bp GCTCGTCCATGCGGTCCTCCACGGCGCTCAGGACTTTaGACTGCTCAGCCTGTGGACAACACCCTCCATGAG +
Preference number: 6 (lower is better)
Translates to: ARPCGPPRRSGL*TAQPVDNTLHE
Trigger: CTCATGGAGGGTGTTGTCCACAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAGGACCGCATGGACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS GCA 72 bp TTTGACCTTGATGAGGGCCACTGTGCGCCTGGACTGTaGAATGCCAGCACCCAGCTCGTCCATGCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FDLDEGHCAPGL*NASTQLVHAVL
Trigger: GAGGACCGCATGGACGAGCTGGGTGCTGGCATTGCACAGTCCAGGCGCACAGTGGCCCTCATCAAGGTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CCA 72 bp CTCCACGGCGCTCAGGACTTTGGACTGCTCAGCCTGTaGACAACACCCTCCATGAGTGTGAGGTCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LHGAQDFGLLSL*TTPSMSVRSGR
Trigger: TCTGCCAGACCTCACACTCATGGAGGGTGTTGTCCACAGGCTGAGCAGTCCAAAGTCCTGAGCGCCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CAA 72 bp GGGCCGTCCGCTGGTCTCAGTGTTGCTCAGATGAATTaGAGAACTTCCTCCGGCGGGGAAGAGGCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GPSAGLSVAQMN*RTSSGGEEAES
Trigger: ACTCTCTGCCTCTTCCCCGCCGGAGGAAGTTCTCAAATTCATCTGAGCAACACTGAGACCAGCGGACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS GCA 72 bp CCTGTCCTGGATCTGGGCCAGGTCAGGGGACACTTGTaGTCAGTAGGTATGGGCATGGTTTGTTTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: PVLDLGQVRGHL*SVGMGMVCLEW
Trigger: CCACTCCAAACAAACCATGCCCATACCTACTGAGCACAAGTGTCCCCTGACCTGGCCCAGATCCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CAA 90 bp CCTAGTACAGGGCCGTCCGCTGGTCTCAGTGTTGCTCAGATGAATTaGAGAACTTCCTCCGGCGGGGAAGAGGCAGAGAGTAAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: PSTGPSAGLSVAQMN*RTSSGGEEAESKPV
Trigger: AACTGGCTTACTCTCTGCCTCTTCCCCGCCGGAGGAAGTTCTCAAATTCATCTGAGCAACACTGAGACCAGCGGACGGCCCTGTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586495.1
CDS CAA 90 bp GTCCCTGGGAGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTaGGGGCTCAGCATCAGCTGTAGAAGAGGAGACAGTGGTGAGAAC +
Preference number: 6 (lower is better)
Translates to: VPGSFTLQEVRTLEV*GLSISCRRGDSGEN
Trigger: GTTCTCACCACTGTCTCCTCTTCTACAGCTGATGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCTCCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592942.1
CDS CAA 72 bp CAGGGGACACTTGTGCTCAGTAGGTATGGGCATGGTTaGTTTGGAGTGGATTGTTCCATGCTGAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: QGTLVLSRYGHG*FGVDCSMLREG
Trigger: CCCCTCCCTCAGCATGGAACAATCCACTCCAAACAAACCATGCCCATACCTACTGAGCACAAGTGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587774.1
CDS CAA 72 bp AGCTTCACTCTCCAAGAGGTTCGTACTCTCGAGGTCTaGGGGCTCAGCATCAGCTGTAGAAGAGGAGACAGT +
Preference number: 6 (lower is better)
Translates to: SFTLQEVRTLEV*GLSISCRRGDS
Trigger: ACTGTCTCCTCTTCTACAGCTGATGCTGAGCCCCAAGACCTCGAGAGTACGAACCTCTTGGAGAGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592942.1