RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM44 (Homo sapiens)

Ensembl gene IDs: ENSG00000166326

Ensembl transcript IDs: ENST00000299413.7, ENST00000532066.1

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGTGTCCTCCGCAACTGGGGAAGAGGAAGTAGGGCCTAATGATTaGTCTCGGAGACAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCT +
Preference number: 1 (lower is better)
Translates to: AVSSATGEEEVGPND*SRRQRVCCPGLYQP
Trigger: AGGCTGGTAAAGCCCAGGACAGCAGACTCTCTGTCTCCGAGAGCAATCATTAGGCCCTACTTCCTCTTCCCCAGTTGCGGAGGACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp ACCTGCACCCAGGCAAGACCCAATTCTGAGCTCTCTAACTTTTACTaGCCTGGCAGGAGGGAAGCCTCATCATGCTGGGGCTTAAGGCCA +
Preference number: 1 (lower is better)
Translates to: TCTQARPNSELSNFY*PGRREASSCWGLRP
Trigger: TGGCCTTAAGCCCCAGCATGATGAGGCTTCCCTCCTGCCAGGTCAGTAAAAGTTAGAGAGCTCAGAATTGGGTCTTGCCTGGGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp GAGAGTGAGATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTaGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAG +
Preference number: 1 (lower is better)
Translates to: ESEIQGVGDDLKVYG*GVPQEEGFWSELKE
Trigger: CTCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGATCTCACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp TCTGAGAATTTGTGCCTGGAATCCATGAGGCTCATGGTTTCCAGATaGAAAGGCCGGAAGAATAGGAGGCGGAGGAGTAGAGGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: SENLCLESMRLMVSR*KGRKNRRRRSRGRV
Trigger: CACCCTGCCTCTACTCCTCCGCCTCCTATTCTTCCGGCCTTTCCATCTGGAAACCATGAGCCTCATGGATTCCAGGCACAAATTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TCTGTTACTAAGAGGAGAGTGAGATCCAGGGTGTGGGAGATGATCTaGAGGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGT +
Preference number: 1 (lower is better)
Translates to: SVTKRRVRSRVWEMI*RSMGGECHRKKGSG
Trigger: ACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGATCTCACTCTCCTCTTAGTAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp CCTCCAAACACATTGTGGTTTGTTAAAACACTGAAGACTCCTAAGTaGTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCT +
Preference number: 1 (lower is better)
Translates to: PPNTLWFVKTLKTPK*YSGRQCHPTRQQCP
Trigger: AGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCACTTAGGAGTCTTCAGTGTTTTAACAAACCACAATGTGTTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp GCAGAGCAGCTCAGTGAGGGGCAACATGAAGGTGGCTCCATCTACTaGATCTCTAACAGGACTCCAGCACAACAGTCAGAAGCTACCATT +
Preference number: 1 (lower is better)
Translates to: AEQLSEGQHEGGSIY*ISNRTPAQQSEATI
Trigger: AATGGTAGCTTCTGACTGTTGTGCTGGAGTCCTGTTAGAGATTCAGTAGATGGAGCCACCTTCATGTTGCCCCTCACTGAGCTGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp CTGCTGTGGATCTGGGGACACATCTGGTGGAAGTACGTTTGTTGCTaGGCAGCTTTCACAGAAATCAGAAGCCGTTACATACACGCTGTC +
Preference number: 1 (lower is better)
Translates to: LLWIWGHIWWKYVCC*AAFTEIRSRYIHAV
Trigger: GACAGCGTGTATGTAACGGCTTCTGATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAGATGTGTCCCCAGATCCACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp AGTATCCGACTGATTCTGGAAACATTCATTACCTGCCTCCCTTGGTaGCTTCTCTTTAGGGGTTTCAGCAAACCCTGCCACCTGCACCCA +
Preference number: 1 (lower is better)
Translates to: SIRLILETFITCLPW*LLFRGFSKPCHLHP
Trigger: TGGGTGCAGGTGGCAGGGTTTGCTGAAACCCCTAAAGAGAAGTCACCAAGGGAGGCAGGTAATGAATGTTTCCAGAATCAGTCGGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TGTAGTGGCATGGCTTCAACAGAGCATTTGTCTCACCCTGAAATATaGAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAAT +
Preference number: 1 (lower is better)
Translates to: CSGMASTEHLSHPEI*RSNACLLKLSSAQN
Trigger: ATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTTCATATTTCAGGGTGAGACAAATGCTCTGTTGAAGCCATGCCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TCTCTGACCCTACCCGTCATTTTAGGCGCATGTAGAGAGAGAACATaGTGTGCCAAATGCCACACAACTTGTCAGTGGCAGAGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: SLTLPVILGACRERT*CAKCHTTCQWQSRD
Trigger: ATCCCTGCTCTGCCACTGACAAGTTGTGTGGCATTTGGCACATCATGTTCTCTCTCTACATGCGCCTAAAATGACGGGTAGGGTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp CAGGCTATACAAAGCAAGACCTTCTTTGCAAAAGGCAAACTCCTTTaGCCCAAGGCCATACTGTACATGTGTGGGGGTAGTTGTAGGGGG +
Preference number: 1 (lower is better)
Translates to: QAIQSKTFFAKGKLL*PKAILYMCGGSCRG
Trigger: CCCCCTACAACTACCCCCACACATGTACAGTATGGCCTTGGGGCAAAGGAGTTTGCCTTTTGCAAAGAAGGTCTTGCTTTGTATAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp GATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTaGTCGGAGTTAAAGGAGGATATATCTATATGCTGGGAGATGAGC +
Preference number: 1 (lower is better)
Translates to: DLKVYGWGVPQEEGF*SELKEDISICWEMS
Trigger: GCTCATCTCCCAGCATATAGATATATCCTCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp TGGGCATCCAAGTTTCCCATCTTATTAGACATCCTGGAGGAGGGCTaGAGTGCAATTTCCTTCAGGGCTGTCACTTTGACTCAGTGCCTT +
Preference number: 1 (lower is better)
Translates to: WASKFPILLDILEEG*SAISFRAVTLTQCL
Trigger: AAGGCACTGAGTCAAAGTGACAGCCCTGAAGGAAATTGCACTCCAGCCCTCCTCCAGGATGTCTAATAAGATGGGAAACTTGGATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TGTGAACTAGGCCAGGTCCCTTATTTGCTCTGCAAGTCTGCCATTTaGCAATGGGCCAGGTCTGAAGATAGACAGCAGTTTTGCATGTCC +
Preference number: 1 (lower is better)
Translates to: CELGQVPYLLCKSAI*QWARSEDRQQFCMS
Trigger: GGACATGCAAAACTGCTGTCTATCTTCAGACCTGGCCCATTGTCAAATGGCAGACTTGCAGAGCAAATAAGGGACCTGGCCTAGTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TACTATCTTATCTTACCAGGCAGGCCTCCAGAATCAAGAACTGCCTaGGTCTTATGGTTTCTGGAATGGGACAGGGTAGGGGGCTTCATA +
Preference number: 1 (lower is better)
Translates to: YYLILPGRPPESRTA*VLWFLEWDRVGGFI
Trigger: TATGAAGCCCCCTACCCTGTCCCATTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGAGGCCTGCCTGGTAAGATAAGATAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp AAGCACACAGTAAGCATAAAACTGGTCATCCCTTGGAGAGATATGTaGCTGCTGTGGATCTGGGGACACATCTGGTGGAAGTACGTTTGT +
Preference number: 1 (lower is better)
Translates to: KHTVSIKLVIPWRDM*LLWIWGHIWWKYVC
Trigger: ACAAACGTACTTCCACCAGATGTGTCCCCAGATCCACAGCAGGCACATATCTCTCCAAGGGATGACCAGTTTTATGCTTACTGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp TTAGGTCTAACTGGAGTAGTTAGACTCTCAGGTCACCAAAATGGCTaGGCATCCAAGTTTCCCATCTTATTAGACATCCTGGAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: LGLTGVVRLSGHQNG*ASKFPILLDILEEG
Trigger: GCCCTCCTCCAGGATGTCTAATAAGATGGGAAACTTGGATGCCCAGCCATTTTGGTGACCTGAGAGTCTAACTACTCCAGTTAGACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp ATTATACTATCTTATCTTACCAGGCAGGCCTCCAGAATCAAGAACTaGCTGAGTCTTATGGTTTCTGGAATGGGACAGGGTAGGGGGCTT +
Preference number: 1 (lower is better)
Translates to: IILSYLTRQASRIKN*LSLMVSGMGQGRGL
Trigger: AAGCCCCCTACCCTGTCCCATTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGAGGCCTGCCTGGTAAGATAAGATAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp ACCCAAGCTGAGAAATTTCCCAAACATCTGAAATCTGAGAATTTGTaGCTGGAATCCATGAGGCTCATGGTTTCCAGATGGAAAGGCCGG +
Preference number: 1 (lower is better)
Translates to: TQAEKFPKHLKSENL*LESMRLMVSRWKGR
Trigger: CCGGCCTTTCCATCTGGAAACCATGAGCCTCATGGATTCCAGGCACAAATTCTCAGATTTCAGATGTTTGGGAAATTTCTCAGCTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp GATCAGGGCCAGGTTACCCCAGAGTGCTCAATAATCCATGAGAAATaGATCCTATCTTCGTTCCAGGGCTTAGTATTGGCATTACACCAT +
Preference number: 1 (lower is better)
Translates to: DQGQVTPECSIIHEK*ILSSFQGLVLALHH
Trigger: ATGGTGTAATGCCAATACTAAGCCCTGGAACGAAGATAGGATTCATTTCTCATGGATTATTGAGCACTCTGGGGTAACCTGGCCCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp GTCATCAGATCAGGGCCAGGTTACCCCAGAGTGCTCAATAATCCATaGGAAATGAATCCTATCTTCGTTCCAGGGCTTAGTATTGGCATT +
Preference number: 1 (lower is better)
Translates to: VIRSGPGYPRVLNNP*EMNPIFVPGLSIGI
Trigger: AATGCCAATACTAAGCCCTGGAACGAAGATAGGATTCATTTCTCATGGATTATTGAGCACTCTGGGGTAACCTGGCCCTGATCTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TTGTTATCAGTGGTTTGTCATCCTCCCCACCTGAAACTACCCTACTaGCACTCCCTATTGCCCTACTATCACCAAGTCAAAGAGCAATCT +
Preference number: 1 (lower is better)
Translates to: LLSVVCHPPHLKLPY*HSLLPYYHQVKEQS
Trigger: AGATTGCTCTTTGACTTGGTGATAGTAGGGCAATAGGGAGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGACAAACCACTGATAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp GATAAATGCTGCCGGCAGGAACTTAGAAGCCTGGGCAAAAGCTGCTaGACTGTGTTTAATGCTTCCCTGGTTAAAGTTTTATCAGGTACT +
Preference number: 1 (lower is better)
Translates to: DKCCRQELRSLGKSC*TVFNASLVKVLSGT
Trigger: AGTACCTGATAAAACTTTAACCAGGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp GCAAGAGAATATTTTCTACTTGGGGAGAGAGGACTTCCTAGACCCTaGCACAACTACAAGGTCATGAATTCTGCATTTGTGCCCTTAGGT +
Preference number: 1 (lower is better)
Translates to: AREYFLLGERGLPRP*HNYKVMNSAFVPLG
Trigger: ACCTAAGGGCACAAATGCAGAATTCATGACCTTGTAGTTGTGGCAGGGTCTAGGAAGTCCTCTCTCCCCAAGTAGAAAATATTCTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp CAGACCATTCTAGGAATCCTGGCTTCTTTATACCACTTAAACATATaGAATGGCAGATGCCCCGGTGACCTAATTCTTCCACGTCTTGTC +
Preference number: 1 (lower is better)
Translates to: QTILGILASLYHLNI*NGRCPGDLILPRLV
Trigger: GACAAGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTATAAAGAAGCCAGGATTCCTAGAATGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp CTAGTTCTTACATTGATAAATGCTGCCGGCAGGAACTTAGAAGCCTaGGCAAAAGCTGCTGCACTGTGTTTAATGCTTCCCTGGTTAAAG +
Preference number: 1 (lower is better)
Translates to: LVLTLINAAGRNLEA*AKAAALCLMLPWLK
Trigger: CTTTAACCAGGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGTAAGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TGGTCGGAGTTAAAGGAGGATATATCTATATGCTGGGAGATGAGCTaGATTCAGAACACATGGAATGGGAACAATTCTCCCCATACTGCG +
Preference number: 1 (lower is better)
Translates to: WSELKEDISICWEMS*IQNTWNGNNSPHTA
Trigger: CGCAGTATGGGGAGAATTGTTCCCATTCCATGTGTTCTGAATTCAGCTCATCTCCCAGCATATAGATATATCCTCCTTTAACTCCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp AAATGTTTAACTACACTCTGGCTTAGGGAGGAAAGCAAGCAGAGGTaGATGTATCCTGTAGTGGCATGGCTTCAACAGAGCATTTGTCTC +
Preference number: 1 (lower is better)
Translates to: KCLTTLWLREESKQR*MYPVVAWLQQSICL
Trigger: GAGACAAATGCTCTGTTGAAGCCATGCCACTACAGGATACATTCACCTCTGCTTGCTTTCCTCCCTAAGCCAGAGTGTAGTTAAACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp ATTGATAAATGCTGCCGGCAGGAACTTAGAAGCCTGGGCAAAAGCTaGTGCACTGTGTTTAATGCTTCCCTGGTTAAAGTTTTATCAGGT +
Preference number: 1 (lower is better)
Translates to: IDKCCRQELRSLGKS*CTVFNASLVKVLSG
Trigger: ACCTGATAAAACTTTAACCAGGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp GGAATCCTGGCTTCTTTATACCACTTAAACATATGCAATGGCAGATaGCCCGGTGACCTAATTCTTCCACGTCTTGTCCTCATAATAGAG +
Preference number: 1 (lower is better)
Translates to: GILASLYHLNICNGR*PGDLILPRLVLIIE
Trigger: CTCTATTATGAGGACAAGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTATAAAGAAGCCAGGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp AAGCGATACTGTTTGGTAATACAATATTATGGGGGCTGGCTTTCCTaGGTAAGTTCAAAGCAGCCATTGAGGGATTACCTGAAGGACCTT +
Preference number: 1 (lower is better)
Translates to: KRYCLVIQYYGGWLS*VSSKQPLRDYLKDL
Trigger: AAGGTCCTTCAGGTAATCCCTCAATGGCTGCTTTGAACTTACTCAGGAAAGCCAGCCCCCATAATATTGTATTACCAAACAGTATCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp TTAAAACAGATAAGCTCCTTTTGCTGTTGTCCCTTTCCAAGAATATaGAGCTGGCCTGACGTCAAGCTGTTGGAGAGCCTTCAACATGTT +
Preference number: 1 (lower is better)
Translates to: LKQISSFCCCPFPRI*SWPDVKLLESLQHV
Trigger: AACATGTTGAAGGCTCTCCAACAGCTTGACGTCAGGCCAGCTTCATATTCTTGGAAAGGGACAACAGCAAAAGGAGCTTATCTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp AATACCCATTTTTATTGTTATCAGTGGTTTGTCATCCTCCCCACCTaGAACTACCCTACTGACACTCCCTATTGCCCTACTATCACCAAG +
Preference number: 1 (lower is better)
Translates to: NTHFYCYQWFVILPT*NYPTDTPYCPTITK
Trigger: CTTGGTGATAGTAGGGCAATAGGGAGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGACAAACCACTGATAACAATAAAAATGGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp GGCTTCTTTATACCACTTAAACATATGCAATGGCAGATGCCCCGGTaGCCTAATTCTTCCACGTCTTGTCCTCATAATAGAGGTAAGAGA +
Preference number: 1 (lower is better)
Translates to: GFFIPLKHMQWQMPR*PNSSTSCPHNRGKR
Trigger: TCTCTTACCTCTATTATGAGGACAAGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTATAAAGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp CAGATCCTTCCTAACAAAGCGATACTGTTTGGTAATACAATATTATaGGGGCTGGCTTTCCTGAGTAAGTTCAAAGCAGCCATTGAGGGA +
Preference number: 1 (lower is better)
Translates to: QILPNKAILFGNTIL*GLAFLSKFKAAIEG
Trigger: TCCCTCAATGGCTGCTTTGAACTTACTCAGGAAAGCCAGCCCCCATAATATTGTATTACCAAACAGTATCGCTTTGTTAGGAAGGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp AAGCTCCTTTTGCTGTTGTCCCTTTCCAAGAATATGAAGCTGGCCTaGCGTCAAGCTGTTGGAGAGCCTTCAACATGTTTAATTAAATCA +
Preference number: 1 (lower is better)
Translates to: KLLLLLSLSKNMKLA*RQAVGEPSTCLIKS
Trigger: TGATTTAATTAAACATGTTGAAGGCTCTCCAACAGCTTGACGTCAGGCCAGCTTCATATTCTTGGAAAGGGACAACAGCAAAAGGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp CCCAACTATATGGTGACACTTGTAATTAGGGCTGACAGAAATCTTTaGAGTAGTACGCAAGATAATGAAGGGGCTGCTTTGAGTTTTCCT +
Preference number: 1 (lower is better)
Translates to: PNYMVTLVIRADRNL*SSTQDNEGAALSFP
Trigger: AGGAAAACTCAAAGCAGCCCCTTCATTATCTTGCGTACTACTTCAAAGATTTCTGTCAGCCCTAATTACAAGTGTCACCATATAGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 90 bp AGGAGGTGCCTGATGACTAGATGTATGGCCTTTGTCTTATGCGTTTaGTTCATGGTATTTATTTCAATTGGTTGGAAGCCTTGTTTGCTT +
Preference number: 1 (lower is better)
Translates to: RRCLMTRCMAFVLCV*FMVFISIGWKPCLL
Trigger: AAGCAAACAAGGCTTCCAACCAATTGAAATAAATACCATGAAGCAAACGCATAAGACAAAGGCCATACATCTAGTCATCAGGCACCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp CCAGATTCACTGGACTTTGAATTGCCACATCCTCACAGAGTACACTaGCGGCTAAGTTTACTAAAATATGAAGATTTCCTTTTCTACAGG +
Preference number: 1 (lower is better)
Translates to: PDSLDFELPHPHRVH*RLSLLKYEDFLFYR
Trigger: CCTGTAGAAAAGGAAATCTTCATATTTTAGTAAACTTAGCCGCCAGTGTACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 90 bp TTTGTTTCTATTTCTGTGACATCTTCTCTTATTACGACTTTCTGTTaGGTGTCTCTAACTCTGGTGCCTTGTGAAGGCCAGGAGATATTC +
Preference number: 1 (lower is better)
Translates to: FVSISVTSSLITTFC*VSLTLVPCEGQEIF
Trigger: GAATATCTCCTGGCCTTCACAAGGCACCAGAGTTAGAGACACCCAACAGAAAGTCGTAATAAGAGAAGATGTCACAGAAATAGAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp CTATATATAATCAGCGTGGCACATGTTTTTACAGTCATGCAGTGTTaGAAGCAGTGCATCATGGGAGAAAAGATAGTTCTAGTCACATGC +
Preference number: 1 (lower is better)
Translates to: LYIISVAHVFTVMQC*KQCIMGEKIVLVTC
Trigger: GCATGTGACTAGAACTATCTTTTCTCCCATGATGCACTGCTTTCAACACTGCATGACTGTAAAAACATGTGCCACGCTGATTATATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp ATAGGTATGGAAAAATCCTTGCCTGGGTACCAAATGGGATGCAGCTaGTTTAGACCATCTCTATATATAATCAGCGTGGCACATGTTTTT +
Preference number: 1 (lower is better)
Translates to: IGMEKSLPGYQMGCS*FRPSLYIISVAHVF
Trigger: AAAAACATGTGCCACGCTGATTATATATAGAGATGGTCTAAATCAGCTGCATCCCATTTGGTACCCAGGCAAGGATTTTTCCATACCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 90 bp GAACAAGTAAATACATACGGTAATTTGAGGTACTTACCGTTGATATaGAAAAGTACATGGGGATGTGGTACAGAGGGCTATGAAACAGCC +
Preference number: 1 (lower is better)
Translates to: EQVNTYGNLRYLPLI*KSTWGCGTEGYETA
Trigger: GGCTGTTTCATAGCCCTCTGTACCACATCCCCATGTACTTTTTCATATCAACGGTAAGTACCTCAAATTACCGTATGTATTTACTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGCCAGGGTGTGGGAGATaGTCTGAAGGTCTATGGGTG +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLPGCGR*SEGLWV
Trigger: CACCCATAGACCTTCAGATCATCTCCCACACCCTGG...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGGAAGCCTCATCATGCTaGGGCTTAAGGCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLEASSC*GLRPSS
Trigger: GCTGCTTGGCCTTAAGCCCCAGCATGATGAGGCTTC...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAGAAGCATATATGCCTaGGAGCTTCCTGGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLRSIYA*ELPGLK
Trigger: TTTGAGGCCAGGAAGCTCCCAGGCATATATGCTTCT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGCCTCAATGCCATTTCTaGGCCCTAACTATAACTGTG +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLPQCHF*ALTITV
Trigger: CACAGTTATAGTTAGGGCTCAGAAATGGCATTGAGG...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAGGACCTTTCTTAATTaGTCCTGGTGGATCAAAGGG +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLRTFLN*SWWIKG
Trigger: CCCTTTGATCCACCAGGAGCAATTAAGAAAGGTCCT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGTTCATTTTTCTGCTCTaGCCCTCGTTCTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLFIFLL*PSFCCF
Trigger: GAAACAGCAGAACGAGGGCCAGAGCAGAAAAATGAA...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGATAGGCAGAGGACAATaGATTCATTGGTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLIGRGQ*IHWFSP
Trigger: TGGGGAGAACCAATGAATCCATTGTCCTCTGCCTAT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGCAAGGTCATGAATTCTaGATTTGTGCCCTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLQGHEF*ICALRS
Trigger: AGACCTAAGGGCACAAATGCAGAATTCATGACCTTG...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGGTTCTCCCCATTCATaGAGTGTGGCCTGTCACTGT +
Preference number: 2 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEGSPHS*SVACHC
Trigger: ACAGTGACAGGCCACACTGCATGAATGGGGAGAACC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAGAGTCCAGATTCACTaGACTTTGAATTGCCACATC +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLRVQIH*TLNCHI
Trigger: GATGTGGCAATTCAAAGTCCAGTGAATCTGGACTCT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGATCCTGGAGGAGGGCTaGAGTGCAATTTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEILEEG*SAISFR
Trigger: CCTGAAGGAAATTGCACTCCAGCCCTCCTCCAGGAT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGCAAAAGTGCTTTCCTTaGGGATCACAGAGATATGAT +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLQKCFP*GSQRYD
Trigger: ATCATATCTCTGTGATCCTCAAGGAAAGCACTTTTG...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTGTGTGGTTTTGGAGCTaGGTTGGGAAGAGGATGGAT +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAVWFWS*VGKRMD
Trigger: ATCCATCCTCTTCCCAACTCAGCTCCAAAACCACAC...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCAACAGGAGAGTACCTaGCCCAGAGAAAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAQQEST*PRERAK
Trigger: CTTAGCTCTTTCTCTGGGCCAGGTACTCTCCTGTTG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTAAAGAAGGTGCCTTTTaGTGGTGCCACCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAKEGAF*WCHLLW
Trigger: CCAAAGCAGGTGGCACCACCAAAAGGCACCTTCTTT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGGATGCTTCAAGAAGATaGAGGTTTTTAAGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLDASRR*RFLSLQ
Trigger: CTGCAAACTTAAAAACCTGCATCTTCTTGAAGCATC...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGATGGTTCTAGTTGTATaGTTCGTAAGTGAACACCAA +
Preference number: 2 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLMVLVV*FVSEHQ
Trigger: TTGGTGTTCACTTACGAAGCATACAACTAGAACCAT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGCACTGGACTTTGAATTaGCACATCCTCACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEHWTLN*HILTEY
Trigger: GTACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTG...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp GTGCCTGCTGTGGATCTGGGGACACATCTGGTGGAAGTACGTTTGTaGCTGAGCAGCTTTCACAGAAATCAGAAGCCGTTACATACACGC +
Preference number: 2 (lower is better)
Translates to: VPAVDLGTHLVEVRL*LSSFHRNQKPLHTR
Trigger: GCGTGTATGTAACGGCTTCTGATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAGATGTGTCCCCAGATCCACAGCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATAGGGAAGCCTCATCATaGTGGGGCTTAAGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNREASS*WGLRPS
Trigger: GCTTGGCCTTAAGCCCCAGCATGATGAGGCTTCCCT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGGTTTCAGCAAACCCTaGCACCTGCACCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFGFSKP*HLHPGK
Trigger: CTTGCCTGGGTGCAGGTGGCAGGGTTTGCTGAAACC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTAAATCTGAGAATTTGTaGCTGGAATCCATGAGGCTC +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAKSENL*LESMRL
Trigger: GAGCCTCATGGATTCCAGGCACAAATTCTCAGATTT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCTGAAGGTCTATGGGTaGGGAGTGCCACAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWLKVYG*GVPQEE
Trigger: TTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp CTAGGGGAAGGTAGTGCCACTGCAGGAAGCATCCTAGTTCTTACATaGATAAATGCTGCCGGCAGGAACTTAGAAGCCTGGGCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: LGEGSATAGSILVLT*INAAGRNLEAWAKA
Trigger: AGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGTAAGAACTAGGATGCTTCCTGCAGTGGCACTACCTTCCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAGGCCTCTGAGTATATaGCTTCTGATTTCAATGCAA +
Preference number: 2 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLERPLSI*LLISMQ
Trigger: TTGCATTGAAATCAGAAGTCATATACTCAGAGGCCT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTGGCAGATGCCCCGGTaGCCTAATTCTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFWQMPR*PNSSTS
Trigger: AGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTTTTGCATGTCCTCATaGGGCTGTTTCAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAFCMSS*GCFSDY
Trigger: ATAATCACTGAAACAGCCTCATGAGGACATGCAAAA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTCTTACATTGATAAATaGTGCCGGCAGGAACTTAGA +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREASYIDK*CRQELR
Trigger: TCTAAGTTCCTGCCGGCAGCATTTATCAATGTAAGA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTTATTTTCATTTTTCTaGTCTGGCCCTCGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLELFSFF*SGPRSA
Trigger: AGCAGAACGAGGGCCAGAGCAGAAAAATGAAAATAA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAGGTAATACAATATTATaGGGGCTGGCTTTCCTGAGT +
Preference number: 2 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGGNTIL*GLAFLS
Trigger: ACTCAGGAAAGCCAGCCCCCATAATATTGTATTACC...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCACAAGCTGTCACGCTaGTATTATATCTACATAACG +
Preference number: 2 (lower is better)
Translates to: CRLHSKHDAGICSASREAHKLSR*YYIYIT
Trigger: CGTTATGTAGATATAATACCAGCGTGACAGCTTGTG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATACCACAACCAGGGGATaGGAAGCACACAGTAAGCAT +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNTTTRG*EAHSKH
Trigger: ATGCTTACTGTGTGCTTCTCATCCCCTGGTTGTGGT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCTGAAGACTCCTAAGTaGTACAGTGGCAGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFLKTPK*YSGRQC
Trigger: GCACTGCCTGCCACTGTAGCACTTAGGAGTCTTCAG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGATCTGGGGACACATCTaGTGGAAGTACGTTTGTTGC +
Preference number: 2 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQIWGHI*WKYVCC
Trigger: GCAACAAACGTACTTCCACCAGATGTGTCCCCAGAT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAAACTGGTCATCCCTTaGAGAGATATGTGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQKLVIP*RDMCLL
Trigger: CAGCAGGCACATATCTCTCCAAGGGATGACCAGTTT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp TATGTGCCTGCTGTGGATCTGGGGACACATCTGGTGGAAGTACGTTaGTTGCTGAGCAGCTTTCACAGAAATCAGAAGCCGTTACATACA +
Preference number: 2 (lower is better)
Translates to: YVPAVDLGTHLVEVR*LLSSFHRNQKPLHT
Trigger: TGTATGTAACGGCTTCTGATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAGATGTGTCCCCAGATCCACAGCAGGCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGGAGAGATATGTGCCTaGTGTGGATCTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLGEICA*CGSGDT
Trigger: TGTGTCCCCAGATCCACAGCAGGCACATATCTCTCC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATGTGTGTGGTACAAAGTaGCTGTCCACAGAATTAGGG +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNVCGTK*LSTELG
Trigger: CCCTAATTCTGTGGACAGGCACTTTGTACCACACAC...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTTATTGATTTCCAAATaGACAGGGGCACCAAGTCCG +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFLLISK*TGAPSP
Trigger: CGGACTTGGTGCCCCTGTGCATTTGGAAATCAATAA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATCCCTCCAGATACACCTaGTGGTGGGTTTTAGGATTT +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNPSRYT*WWVLGF
Trigger: AAATCCTAAAACCCACCAGCAGGTGTATCTGGAGGG...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTCAGGGCTGTCACTTTaGCTCAGTGCCTTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSSGLSL*LSALGA
Trigger: AGCTCCTAAGGCACTGAGTCAAAGTGACAGCCCTGA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCACACTCAACTTGCGCTaGGGTCCAGTTTCTTTTTAT +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFTLNLR*GPVSFY
Trigger: ATAAAAAGAAACTGGACCTCAGCGCAAGTTGAGTGT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCATGCAAGCAATTCTTTaGTTGATGGCTCCAACATGG +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFMQAIL*LMAPTW
Trigger: CCATGTTGGAGCCATCAATCAAAGAATTGCTTGCAT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTCTATGGGTGGGGAGTaGCACAGGAAGAAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSSMGGE*HRKKGS
Trigger: AGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTACATTGATAAATGCTaGCGGCAGGAACTTAGAAGC +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFYIDKC*RQELRS
Trigger: GCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGTA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCCAGGTTACCCCAGAGTaGTCAATAATCCATGAGAAA +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFQVTPE*SIIHEK
Trigger: TTTCTCATGGATTATTGAGCACTCTGGGGTAACCTG...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTTTCTTAATTGCTCCTaGTGGATCAAAGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQFLNCS*WIKGAL
Trigger: AAGAGCCCCTTTGATCCACCAGGAGCAATTAAGAAA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCAACTCTGGTGCCTTGTaGAGGCCAGGAGATATTCCA +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSNSGAL*RPGDIP
Trigger: TGGAATATCTCCTGGCCTTCACAAGGCACCAGAGTT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTCAGGCCAGAAGATTTaGCTGCTACCCTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFSGQKI*LLPLDF
Trigger: AAAGTCTAAGGGTAGCAGTCAAATCTTCTGGCCTGA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCCCTTGGAGAGATATGTaGCTGCTGTGGATCTGGGGA +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPPWRDM*LLWIWG
Trigger: TCCCCAGATCCACAGCAGGCACATATCTCTCCAAGG...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCCCCTAGTACATCCCTaGTTACTCGGGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIPLVHP*LLGSTK
Trigger: CTTTGTGCTCCCGAGTAAGCAGGGATGTACTAGGGG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATCCTTTGCTAGGGAATTaGTCTTCCTGTAAGCAAGTA +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNPLLGN*SSCKQV
Trigger: TACTTGCTTACAGGAAGAGCAATTCCCTAGCAAAGG...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTCCAGAATCAAGAACTaGCTGAGTCTTATGGTTTCT +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFSRIKN*LSLMVS
Trigger: AGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAAAGGCAAACTCCTTTaGCCCAAGGCCATACTGTAC +
Preference number: 2 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLKGKLL*PKAILY
Trigger: GTACAGTATGGCCTTGGGGCAAAGGAGTTTGCCTTT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTCAGGAAGAAGGGTTCTaGTCGGAGTTAAAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLQEEGF*SELKED
Trigger: ATCCTCCTTTAACTCCGACCAGAACCCTTCTTCCTG...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGATTCATAAATTGGGATaGTCAGCACACAGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQIHKLG*SAHSGK
Trigger: TTTCCCACTGTGTGCTGACCATCCCAATTTATGAAT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCAGAAGATTCATAAATTaGGATGGTCAGCACACAGTG +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFRRFIN*DGQHTV
Trigger: CACTGTGTGCTGACCATCCCAATTTATGAATCTTCT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATATTACGACTTTCTGTTaGGTGTCTCTAACTCTGGTG +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNITTFC*VSLTLV
Trigger: CACCAGAGTTAGAGACACCCAACAGAAAGTCGTAAT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp ATGACCCAAGCTGAGAAATTTCCCAAACATCTGAAATCTGAGAATTaGTGCCTGGAATCCATGAGGCTCATGGTTTCCAGATGGAAAGGC +
Preference number: 2 (lower is better)
Translates to: MTQAEKFPKHLKSEN*CLESMRLMVSRWKG
Trigger: GCCTTTCCATCTGGAAACCATGAGCCTCATGGATTCCAGGCACAAATTCTCAGATTTCAGATGTTTGGGAAATTTCTCAGCTTGGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGCAGGGAGAAAACTCTaGCTTCCCTTCAAGATTATT +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFAGRKL*LPFKII
Trigger: AATAATCTTGAAGGGAAGTCAGAGTTTTCTCCCTGC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCAGCCCTTCACGTTGTaGCAAGCCCATAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLQPFTL*QAHKTC
Trigger: GCAGGTTTTATGGGCTTGTCACAACGTGAAGGGCTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCTCTCTAACTTTTACTaGCCTGGCAGGAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLLSNFY*PGRREA
Trigger: GGCTTCCCTCCTGCCAGGTCAGTAAAAGTTAGAGAG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTGCACAGCCATTATATaGATGTGGAATTTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFCTAII*MWNFRN
Trigger: ATTCCTGAAATTCCACATTCATATAATGGCTGTGCA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCAATGGATGTGGTGTTaGGATACTGGCACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIQWMWC*DTGTRK
Trigger: CTTCCTGGTGCCAGTATCTCAACACCACATCCATTG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAATATGAAGCTGGCCTaGCGTCAAGCTGTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPNMKLA*RQAVGE
Trigger: CTCTCCAACAGCTTGACGTCAGGCCAGCTTCATATT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCCCCTTTCCAAGAATATaGAGCTGGCCTGACGTCAAG +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPPFPRI*SWPDVK
Trigger: CTTGACGTCAGGCCAGCTTCATATTCTTGGAAAGGG...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCAAGCCCATAAAACCTaGAGAATTCACCCAAATAAT +
Preference number: 2 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQQAHKT*RIHPNN
Trigger: ATTATTTGGGTGAATTCTGCAGGTTTTATGGGCTTG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGAAGATAGCCAGAAATTaGTATGAGTATCCGACTGAT +
Preference number: 2 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWKIARN*YEYPTD
Trigger: ATCAGTCGGATACTCATAGCAATTTCTGGCTATCTT...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTCCTTCTGTTTTTAGGTaGACCATGGTGTGTGGTACA +
Preference number: 2 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLPSVFR*TMVCGT
Trigger: TGTACCACACACCATGGTCCACCTAAAAACAGAAGG...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAGTGTCCTCCGCAACTaGGGAAGAGGAAGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLSVLRN*GRGSRA
Trigger: GGCCCTACTTCCTCTTCCCCAGTTGCGGAGGACACT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp GCATTACCACAGTCAAGTATGCAGCTCGTCATAAATATTTACACCTaGCAGGGTCCTTTGTGCACAACTCTGAGAGACAAATGGCATTTC +
Preference number: 2 (lower is better)
Translates to: ALPQSSMQLVINIYT*QGPLCTTLRDKWHF
Trigger: GAAATGCCATTTGTCTCTCAGAGTTGTGCACAAAGGACCCTGCAAGGTGTAAATATTTATGACGAGCTGCATACTTGACTGTGGTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATGCTGACAGAAATCTTTaGAGTAGTACGCAAGATAAT +
Preference number: 2 (lower is better)
Translates to: SEATNGHPQAREPYLDSNADRNL*SSTQDN
Trigger: ATTATCTTGCGTACTACTTCAAAGATTTCTGTCAGC...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTACAACTACAAGGTCATaGATTCTGCATTTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLTTTRS*ILHLCP
Trigger: AGGGCACAAATGCAGAATTCATGACCTTGTAGTTGT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCAAATGGGATGCAGCTaGTTTAGACCATCTCTATAT +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFQMGCS*FRPSLY
Trigger: ATATAGAGATGGTCTAAATCAGCTGCATCCCATTTG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAGGGATTTCCCCCAGTaGAGGCTCCTTTGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLRDFPQ*RLLWFC
Trigger: GCAGAACCAAAGGAGCCTGCACTGGGGGAAATCCCT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAGCCTGGGCAAAAGCTaGTGCACTGTGTTTAATGCT +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSLGKS*CTVFNA
Trigger: AGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCAAACCAGCTTGGAATTaGTTCATTTACAACTCATTC +
Preference number: 2 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFKPAWN*FIYNSF
Trigger: GAATGAGTTGTAAATGAAGCAATTCCAAGCTGGTTT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACCTAACTCCTGGGGGTaGGCTCAAGTCAGCAATGTG +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTPNSWG*AQVSNV
Trigger: CACATTGCTGACTTGAGCCCACCCCCAGGAGTTAGG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCTGACGTCAAGCTGTTaGAGAGCCTTCAACATGTTT +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSLTSSC*RAFNMF
Trigger: AAACATGTTGAAGGCTCTCCAACAGCTTGACGTCAG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp TATATGAATGTGGAATTTCAGGAATGGCAAGAGAATATTTTCTACTaGGGGAGAGAGGACTTCCTAGACCCTGCCACAACTACAAGGTCA +
Preference number: 2 (lower is better)
Translates to: YMNVEFQEWQENIFY*GREDFLDPATTTRS
Trigger: TGACCTTGTAGTTGTGGCAGGGTCTAGGAAGTCCTCTCTCCCCAAGTAGAAAATATTCTCTTGCCATTCCTGAAATTCCACATTCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGTTCAAGATTTGGCTTaGGTATTTCCTAGCTGTATA +
Preference number: 2 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFVQDLA*VFPSCI
Trigger: TATACAGCTAGGAAATACTCAAGCCAAATCTTGAAC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGAATCAAGAACTGCCTaGGTCTTATGGTTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSESRTA*VLWFLE
Trigger: TTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGTCATCCTCCCCACCTaGAACTACCCTACTGACACT +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTVILPT*NYPTDT
Trigger: AGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGAC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCTGGGCAAAAGCTGCTaGACTGTGTTTAATGCTTCC +
Preference number: 2 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLLGKSC*TVFNAS
Trigger: GGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTCTGGCCCTCGTTCTaGTGTTTCTGGTATGTTCTC +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELWPSF*CFWYVL
Trigger: GAGAACATACCAGAAACAGCAGAACGAGGGCCAGAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTTGCAGGGTCCTTTGTaGACAACTCTGAGAGACAAA +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIILQGPL*TTLRDK
Trigger: TTTGTCTCTCAGAGTTGTGCACAAAGGACCCTGCAA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCGCAAACCATATCACATaGCTTGTGCACATTTGGAGC +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPANHIT*LVHIWS
Trigger: GCTCCAAATGTGCACAAGCCATGTGATATGGTTTGC...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp ACATTAACCCAAACGTGTAATTCCCTTGAAAGATTCAGTGTTCCCTaGTTTAATGTAAAGGGTGGAAGGGGAAGATTCCTAAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: TLTQTCNSLERFSVP*FNVKGGRGRFLRRE
Trigger: TTCCCTCCTTAGGAATCTTCCCCTTCCACCCTTTACATTAAACAAGGGAACACTGAATCTTTCAAGGGAATTACACGTTTGGGTTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGTGCTGGGAGATGAGCTaGATTCAGAACACATGGAAT +
Preference number: 2 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLCWEMS*IQNTWN
Trigger: ATTCCATGTGTTCTGAATTCAGCTCATCTCCCAGCA...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCAAAGCACTGTAGCATaGAAGTCACTTACAAAGCTG +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIQSTVA*KSLTKL
Trigger: CAGCTTTGTAAGTGACTTTCATGCTACAGTGCTTTG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGGGCTTCATAAGCACTaGTGGATAAAGGCAATAATA +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSGLHKH*WIKAII
Trigger: TATTATTGCCTTTATCCAGCAGTGCTTATGAAGCCC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCACCTCCACTGTTCATaGCATTATATGCAAAGCACT +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIHLHCS*HYMQST
Trigger: AGTGCTTTGCATATAATGGCATGAACAGTGGAGGTG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTCAGAACACATGGAATaGGAACAATTCTCCCCATAC +
Preference number: 2 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIISEHME*EQFSPY
Trigger: GTATGGGGAGAATTGTTCCCATTCCATGTGTTCTGA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAGGAACTTAGAAGCCTaGGCAAAAGCTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLRNLEA*AKAAAL
Trigger: CAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACCCATTCATGCAGTGTaGCCTGTCACTGTAGAAAGA +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEPIHAV*PVTVER
Trigger: TCTTTCTACAGTGACAGGCCACACTGCATGAATGGG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp CTGACACTCCCTATTGCCCTACTATCACCAAGTCAAAGAGCAATCTaGTTCCTCTATCATAGTTCTTCCTACTTAGAAGCTGAATTTCAT +
Preference number: 2 (lower is better)
Translates to: LTLPIALLSPSQRAI*FLYHSSSYLEAEFH
Trigger: ATGAAATTCAGCTTCTAAGTAGGAAGAACTATGATAGAGGAACAAGATTGCTCTTTGACTTGGTGATAGTAGGGCAATAGGGAGTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACAGCAACCCAGAGTCTaGTTGGATATGGTTCTAGTT +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEQQPRV*LDMVLV
Trigger: AACTAGAACCATATCCAAGCAGACTCTGGGTTGCTG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTCCCTCACTGTACATTaGATTTTACAGGCTATACAA +
Preference number: 2 (lower is better)
Translates to: FITLESWHLHCSCHYMQSSLTVH*ILQAIQ
Trigger: TTGTATAGCCTGTAAAATGCAATGTACAGTGAGGGA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTTGAGTCTTCACATTTaGCTCCTGAAGGCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLLSLHI*LLKASE
Trigger: CTCAGAGGCCTTCAGGAGCCAAATGTGAAGACTCAA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp TCTATATATAATCAGCGTGGCACATGTTTTTACAGTCATGCAGTGTaGAAAGCAGTGCATCATGGGAGAAAAGATAGTTCTAGTCACATG +
Preference number: 2 (lower is better)
Translates to: SIYNQRGTCFYSHAV*KAVHHGRKDSSSHM
Trigger: CATGTGACTAGAACTATCTTTTCTCCCATGATGCACTGCTTTCAACACTGCATGACTGTAAAAACATGTGCCACGCTGATTATATATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAATGAAGGGGCTGCTTTaGGTTTTCCTTAGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTMKGLL*VFLSSQ
Trigger: TTGAGAGCTAAGGAAAACTCAAAGCAGCCCCTTCAT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACTTTGTGCACAACTCTaGGAGACAAATGGCATTTCC +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTLCAQL*ETNGIS
Trigger: GGAAATGCCATTTGTCTCTCAGAGTTGTGCACAAAG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCAGTATCTACCATCTTaGGTCTTCACATTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLQYLPS*VFTFGS
Trigger: GGAGCCAAATGTGAAGACTCAAGATGGTAGATACTG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACAGATAAGCTCCTTTTaGTGTTGTCCCTTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEQISSF*CCPFPR
Trigger: TCTTGGAAAGGGACAACAGCAAAAGGAGCTTATCTG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACTTAATTGCTCCTGGTaGATCAAAGGGGCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTLNCSW*IKGALF
Trigger: GAAAAGAGCCCCTTTGATCCACCAGGAGCAATTAAG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp GCACACAGTAAACGTGCAGTTAATTTTCTTATTGAGAAGCATGTATaGCACAGCCATTATATGAATGTGGAATTTCAGGAATGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: AHSKRAVNFLIEKHV*HSHYMNVEFQEWQE
Trigger: CTCTTGCCATTCCTGAAATTCCACATTCATATAATGGCTGTGCAATACATGCTTCTCAATAAGAAAATTAACTGCACGTTTACTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAAGTACGTTTGTTGCTaGGCAGCTTTCACAGAAATC +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTKYVCC*AAFTEI
Trigger: GATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGGTTTTGCCTCTCGTTaGTTTTCTTATTTATGGCCT +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEGFASR*FSYLWP
Trigger: AGGCCATAAATAAGAAAATCAACGAGAGGCAAAACC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCCACAAGAGTTAATTTaGCCCTACCTTGCTCTCATT +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLPQELI*PYLALI
Trigger: AATGAGAGCAAGGTAGGGCCAAATTAACTCTTGTGG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCACATATGATCAGATATaGAGAACCAATGATCTGTCT +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPTYDQI*RTNDLS
Trigger: AGACAGATCATTGGTTCTCCATATCTGATCATATGT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAACTCCAAGCACTTCTTaGGACTGTCCTGGATTTAAT +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTTPSTS*DCPGFN
Trigger: ATTAAATCCAGGACAGTCCCAAGAAGTGCTTGGAGT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACCTCACAGAGTACACTaGCGGCTAAGTTTACTAAAA +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTPHRVH*RLSLLK
Trigger: TTTTAGTAAACTTAGCCGCCAGTGTACTCTGTGAGG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTTATCTCCCTCTCTTaGACAATTTTCTCAAGGTTC +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELISLS*TIFSRF
Trigger: GAACCTTGAGAAAATTGTCCAAGAGAGGGAGATAAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGAAATGGGGCCATGTTaGACCAAACAAAGAGTAATA +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEEMGPC*TKQRVI
Trigger: TATTACTCTTTGTTTGGTCCAACATGGCCCCATTTC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTCATTGTCAAACCACTaGTTTAGATTTTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSLSNH*FRFCVQ
Trigger: CTGAACACAAAATCTAAACCAGTGGTTTGACAATGA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 90 bp AAGAGCTGGAGAAATACAAGTGAGAACCTGTTATTACAGGTTAAATaGTGTAACACTCAACTTGCGCTGAGGTCCAGTTTCTTTTTATTA +
Preference number: 2 (lower is better)
Translates to: KSWRNTSENLLLQVK*CNTQLALRSSFFLL
Trigger: TAATAAAAAGAAACTGGACCTCAGCGCAAGTTGAGTGTTACACAATTTAACCTGTAATAACAGGTTCTCACTTGTATTTCTCCAGCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGGTTTGTTAAAACACTaGAGACTCCTAAGTGCTACA +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTGLLKH*RLLSAT
Trigger: TGTAGCACTTAGGAGTCTTCAGTGTTTTAACAAACC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAAATTTGGCCCTACCTTaGTCTCATTTATTTCATGCT +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQENLALP*SHLFHA
Trigger: AGCATGAAATAAATGAGAGCAAGGTAGGGCCAAATT...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAATGGCCTTTGTCTTATaGGTTTGCTTCATGGTATTT +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTMAFVL*VCFMVF
Trigger: AAATACCATGAAGCAAACGCATAAGACAAAGGCCAT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR GCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAATGTTTTTACAGTCATaGAGTGTTGAAAGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTMFLQS*SVESSA
Trigger: TGCACTGCTTTCAACACTGCATGACTGTAAAAACAT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTTCATAAGCACTGCTaGATAAAGGCAATAATAATG +
Preference number: 2 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELHKHC*IKAIIM
Trigger: CATTATTATTGCCTTTATCCAGCAGTGCTTATGAAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACATTTAGGCAGGGCTTaGTATTTTCTAATTCACACA +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTHLGRA*YFLIHT
Trigger: TGTGTGAATTAGAAAATACCAAGCCCTGCCTAAATG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAGATACACCTGCTGGTaGGTTTTAGGATTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTRYTCW*VLGFLN
Trigger: GTTTAAAAATCCTAAAACCCACCAGCAGGTGTATCT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCCTCCAAACACATTGTaGTTTGTTAAAACACTGAAG +
Preference number: 2 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLPPNTL*FVKTLK
Trigger: CTTCAGTGTTTTAACAAACCACAATGTGTTTGGAGG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAAGGGGCTCTTTTCCTaGACCTACCACAACCAGGGG +
Preference number: 3 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLKGLFS*TYHNQG
Trigger: CCCCTGGTTGTGGTAGGTCAAGGAAAAGAGCCCCTT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TCCGCAACTGGGGAAGAGGAAGTAGGGCCTAATGATTaGTCTCGGAGACAGAGAGTCTGCTGTCCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: SATGEEEVGPND*SRRQRVCCPGL
Trigger: AAGCCCAGGACAGCAGACTCTCTGTCTCCGAGAGCAATCATTAGGCCCTACTTCCTCTTCCCCAGTTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAGATTCAGTGTTCCCTaGTTTAATGTAAAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLRFSVP*FNVKGG
Trigger: TCCACCCTTTACATTAAACAAGGGAACACTGAATCT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp AAGAGGAGAGTGAGATCCAGGGTGTGGGAGATGATCTaGAGGTCTATGGGTGGGGAGTGCCACAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: KRRVRSRVWEMI*RSMGGECHRKK
Trigger: CTTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGATCTCACTCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CAGGCAAGACCCAATTCTGAGCTCTCTAACTTTTACTaGCCTGGCAGGAGGGAAGCCTCATCATGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: QARPNSELSNFY*PGRREASSCWG
Trigger: GCCCCAGCATGATGAGGCTTCCCTCCTGCCAGGTCAGTAAAAGTTAGAGAGCTCAGAATTGGGTCTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp GAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTaGGTGACCTTGAGTGACTTATCTCCCTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: ESAVLGFTSLAC*VTLSDLSPSLG
Trigger: TCCAAGAGAGGGAGATAAGTCACTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTGGTGGAAGTACGTTaGTTGCTGAGCAGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLVEVR*LLSSFH
Trigger: GTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CCACACAACTTGTCAGTGGCAGAGCAGGGATGGGAGTaGGGCTTCTCAACTCTCTTCCCTCTTTTCATGGGA +
Preference number: 3 (lower is better)
Translates to: PHNLSVAEQGWE*GFSTLFPLFMG
Trigger: TCCCATGAAAAGAGGGAAGAGAGTTGAGAAGCCTCACTCCCATCCCTGCTCTGCCACTGACAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp AATCTGGGGTCCGAGCCAGGCATTATCATTGGGAAGTaGTGGACAATTTCCCTCTCCCTCCCTCCTCGTTTT +
Preference number: 3 (lower is better)
Translates to: NLGSEPGIIIGK*WTISLSLPPRF
Trigger: AAAACGAGGAGGGAGGGAGAGGGAAATTGTCCACCACTTCCCAATGATAATGCCTGGCTCGGACCCCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTCACTGGACTTTGAATaGCCACATCCTCACAGAGTA +
Preference number: 3 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLESLDFE*PHPHRV
Trigger: TACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTGA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTAGCCAGGCATTATCATaGGGAAGTGGTGGACAATTT +
Preference number: 3 (lower is better)
Translates to: CRLHSKHDAGICSASREASQALS*GSGGQF
Trigger: AAATTGTCCACCACTTCCCAATGATAATGCCTGGCT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCTAGATGTATGGCCTTaGTCTTATGCGTTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: CRLHSKHDAGICSASREALDVWP*SYAFAS
Trigger: TGAAGCAAACGCATAAGACAAAGGCCATACATCTAG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATCTTACCAGGCAGGCCTCCAGAATCAAGAACTGCCTaGGTCTTATGGTTTCTGGAATGGGACAGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: ILPGRPPESRTA*VLWFLEWDRVG
Trigger: CCCTACCCTGTCCCATTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGAGGCCTGCCTGGTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GGGCGGATGTTGTTAAATCATGAGAAAACTCCCCCATaGTCCAATCTTCCCACCAGGTCCCACCTCCAGCAT +
Preference number: 3 (lower is better)
Translates to: GRMLLNHEKTPP*SNLPTRSHLQH
Trigger: ATGCTGGAGGTGGGACCTGGTGGGAAGATTGGATCATGGGGGAGTTTTCTCATGATTTAACAACATCCGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GGAAACTTACAATCATGGTGGAAGGCAAAGGGGGAGTaGGCACTTTACATGGCCAGAGCAGAAGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: GNLQSWWKAKGE*ALYMARAEGRW
Trigger: CCACCTTCCTTCTGCTCTGGCCATGTAAAGTGCTCACTCCCCCTTTGCCTTCCACCATGATTGTAAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp ACATTGTGGTTTGTTAAAACACTGAAGACTCCTAAGTaGTACAGTGGCAGGCAGTGCCACCCCACCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TLWFVKTLKTPK*YSGRQCHPTRQ
Trigger: CTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCACTTAGGAGTCTTCAGTGTTTTAACAAACCACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TTCTGCAGGCTGCACAGCAAGCATGATGCTGGCATCTaGTCAGCTTCTAGGGAGGCTTCAGGAAACTTACAA +
Preference number: 3 (lower is better)
Translates to: FCRLHSKHDAGI*SASREASGNLQ
Trigger: TTGTAAGTTTCCTGAAGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATACCTTGCAGGGTCCTTaGTGCACAACTCTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: SEATNGHPQAREPYLDSNTLQGP*CTTLRD
Trigger: GTCTCTCAGAGTTGTGCACAAAGGACCCTGCAAGGT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTaGCTTATCTCCCTCTCTTGGACAATTTTCTCAAGG +
Preference number: 3 (lower is better)
Translates to: GLYQPGLLGDLE*LISLSWTIFSR
Trigger: CCTTGAGAAAATTGTCCAAGAGAGGGAGATAAGTCACTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ACTACACTCTGGCTTAGGGAGGAAAGCAAGCAGAGGTaGATGTATCCTGTAGTGGCATGGCTTCAACAGAGC +
Preference number: 3 (lower is better)
Translates to: TTLWLREESKQR*MYPVVAWLQQS
Trigger: GCTCTGTTGAAGCCATGCCACTACAGGATACATTCACCTCTGCTTGCTTTCCTCCCTAAGCCAGAGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CTCAGTGAGGGGCAACATGAAGGTGGCTCCATCTACTaGATCTCTAACAGGACTCCAGCACAACAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LSEGQHEGGSIY*ISNRTPAQQSE
Trigger: TTCTGACTGTTGTGCTGGAGTCCTGTTAGAGATTCAGTAGATGGAGCCACCTTCATGTTGCCCCTCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp GTAAGCATAAAACTGGTCATCCCTTGGAGAGATATGTaGCTGCTGTGGATCTGGGGACACATCTGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: VSIKLVIPWRDM*LLWIWGHIWWK
Trigger: CTTCCACCAGATGTGTCCCCAGATCCACAGCAGGCACATATCTCTCCAAGGGATGACCAGTTTTATGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TGCTGCCGGCAGGAACTTAGAAGCCTGGGCAAAAGCTaGTGCACTGTGTTTAATGCTTCCCTGGTTAAAGTT +
Preference number: 3 (lower is better)
Translates to: CCRQELRSLGKS*CTVFNASLVKV
Trigger: AACTTTAACCAGGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TCTGTTTTTAGGTGGACCATGGTGTGTGGTACAAAGTaGCTGTCCACAGAATTAGGGGGAGCTGCGTTCAAG +
Preference number: 3 (lower is better)
Translates to: SVFRWTMVCGTK*LSTELGGAAFK
Trigger: CTTGAACGCAGCTCCCCCTAATTCTGTGGACAGGCACTTTGTACCACACACCATGGTCCACCTAAAAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TCCCATCTTATTAGACATCCTGGAGGAGGGCTGGAGTaGAATTTCCTTCAGGGCTGTCACTTTGACTCAGTG +
Preference number: 3 (lower is better)
Translates to: SHLIRHPGGGLE*NFLQGCHFDSV
Trigger: CACTGAGTCAAAGTGACAGCCCTGAAGGAAATTGCACTCCAGCCCTCCTCCAGGATGTCTAATAAGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGTGGAAGTACGTTTGTaGCTGAGCAGCTTTCACAGA +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFVEVRL*LSSFHR
Trigger: TCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCAC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGAGTTCAAAGCAGCCATaGAGGGATTACCTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWSSKQP*RDYLKD
Trigger: GTCCTTCAGGTAATCCCTCAATGGCTGCTTTGAACT...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCAAAGTTCTATATCTTaGAAGGCCAAGAAACACCTT +
Preference number: 3 (lower is better)
Translates to: CRLHSKHDAGICSASREAQSSIS*KAKKHL
Trigger: AAGGTGTTTCTTGGCCTTCAAAGATATAGAACTTTG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTAGTCAAAGAGCAATCTaGTTCCTCTATCATAGTTCT +
Preference number: 3 (lower is better)
Translates to: CRLHSKHDAGICSASREASQRAI*FLYHSS
Trigger: AGAACTATGATAGAGGAACAAGATTGCTCTTTGACT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CTGATTCTGGAAACATTCATTACCTGCCTCCCTTGGTaGCTTCTCTTTAGGGGTTTCAGCAAACCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: LILETFITCLPW*LLFRGFSKPCH
Trigger: GTGGCAGGGTTTGCTGAAACCCCTAAAGAGAAGTCACCAAGGGAGGCAGGTAATGAATGTTTCCAGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GTGGTTTGTCATCCTCCCCACCTGAAACTACCCTACTaGCACTCCCTATTGCCCTACTATCACCAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: VVCHPPHLKLPY*HSLLPYYHQVK
Trigger: TTTGACTTGGTGATAGTAGGGCAATAGGGAGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGACAAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CTACCCGTCATTTTAGGCGCATGTAGAGAGAGAACATaGTGTGCCAAATGCCACACAACTTGTCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: LPVILGACRERT*CAKCHTTCQWQ
Trigger: CTGCCACTGACAAGTTGTGTGGCATTTGGCACATCATGTTCTCTCTCTACATGCGCCTAAAATGACGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TCTTATCTTACCAGGCAGGCCTCCAGAATCAAGAACTaGCTGAGTCTTATGGTTTCTGGAATGGGACAGGGT +
Preference number: 3 (lower is better)
Translates to: SYLTRQASRIKN*LSLMVSGMGQG
Trigger: ACCCTGTCCCATTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGAGGCCTGCCTGGTAAGATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp CAAAGCAAGACCTTCTTTGCAAAAGGCAAACTCCTTTaGCCCAAGGCCATACTGTACATGTGTGGGGGTAGT +
Preference number: 3 (lower is better)
Translates to: QSKTFFAKGKLL*PKAILYMCGGS
Trigger: ACTACCCCCACACATGTACAGTATGGCCTTGGGGCAAAGGAGTTTGCCTTTTGCAAAGAAGGTCTTGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp ACATTGATAAATGCTGCCGGCAGGAACTTAGAAGCCTaGGCAAAAGCTGCTGCACTGTGTTTAATGCTTCCC +
Preference number: 3 (lower is better)
Translates to: TLINAAGRNLEA*AKAAALCLMLP
Trigger: GGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCAACCCAGAGTCTGCTaGGATATGGTTCTAGTTGTA +
Preference number: 3 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQQPRVC*DMVLVV
Trigger: TACAACTAGAACCATATCCAAGCAGACTCTGGGTTG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCATCCTAGTTCTTACATaGATAAATGCTGCCGGCAGG +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFILVLT*INAAGR
Trigger: CCTGCCGGCAGCATTTATCAATGTAAGAACTAGGAT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTTTCAGGGCTGTCACTTaGACTCAGTGCCTTAGGAGC +
Preference number: 3 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLFRAVT*TQCLRS
Trigger: GCTCCTAAGGCACTGAGTCAAAGTGACAGCCCTGAA...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTAAAACTGGTCATCCCTaGGAGAGATATGTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFKTGHP*ERYVPA
Trigger: AGCAGGCACATATCTCTCCAAGGGATGACCAGTTTT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAAGTTATTTCCCTTCTaGGGCTGTCAGAGCCGAGAC +
Preference number: 3 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLKLFPF*GCQSRD
Trigger: GTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCACAGTATCTACCATCTaGAGTCTTCACATTTGGCTC +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFTVSTI*SLHIWL
Trigger: GAGCCAAATGTGAAGACTCAAGATGGTAGATACTGT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGCATTTAGGCAGGGCTaGGTATTTTCTAATTCACAC +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFAFRQG*VFSNSH
Trigger: GTGTGAATTAGAAAATACCAAGCCCTGCCTAAATGC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GACTTTCTGTTGGGTGTCTCTAACTCTGGTGCCTTGTaGAGGCCAGGAGATATTCCAGACAAGCTGAAATTC +
Preference number: 3 (lower is better)
Translates to: DFLLGVSNSGAL*RPGDIPDKLKF
Trigger: GAATTTCAGCTTGTCTGGAATATCTCCTGGCCTTCACAAGGCACCAGAGTTAGAGACACCCAACAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATAAGCTCCTTTTGCTGTTGTCCCTTTCCAAGAATATaGAGCTGGCCTGACGTCAAGCTGTTGGAGAGCCTT +
Preference number: 3 (lower is better)
Translates to: ISSFCCCPFPRI*SWPDVKLLESL
Trigger: AAGGCTCTCCAACAGCTTGACGTCAGGCCAGCTTCATATTCTTGGAAAGGGACAACAGCAAAAGGAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp TCAGGGCCAGGTTACCCCAGAGTGCTCAATAATCCATaGGAAATGAATCCTATCTTCGTTCCAGGGCTTAGT +
Preference number: 3 (lower is better)
Translates to: SGPGYPRVLNNP*EMNPIFVPGLS
Trigger: ACTAAGCCCTGGAACGAAGATAGGATTCATTTCTCATGGATTATTGAGCACTCTGGGGTAACCTGGCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp AAGTTTCCCATCTTATTAGACATCCTGGAGGAGGGCTaGAGTGCAATTTCCTTCAGGGCTGTCACTTTGACT +
Preference number: 3 (lower is better)
Translates to: KFPILLDILEEG*SAISFRAVTLT
Trigger: AGTCAAAGTGACAGCCCTGAAGGAAATTGCACTCCAGCCCTCCTCCAGGATGTCTAATAAGATGGGAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTTCAGGCCAGAAGATTaGACTGCTACCCTTAGACTT +
Preference number: 3 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFFRPED*TATLRL
Trigger: AAGTCTAAGGGTAGCAGTCAAATCTTCTGGCCTGAA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATCTGGGGACACATCTGGTGGAAGTACGTTTGTTGCTaGGCAGCTTTCACAGAAATCAGAAGCCGTTACATA +
Preference number: 3 (lower is better)
Translates to: IWGHIWWKYVCC*AAFTEIRSRYI
Trigger: TATGTAACGGCTTCTGATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAGATGTGTCCCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GAAAACCTCCAAACACATTGTGGTTTGTTAAAACACTaGAGACTCCTAAGTGCTACAGTGGCAGGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: ENLQTHCGLLKH*RLLSATVAGSA
Trigger: GGCACTGCCTGCCACTGTAGCACTTAGGAGTCTTCAGTGTTTTAACAAACCACAATGTGTTTGGAGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TTGGCCACAAGTGGGCTAGGTATACTCTCAGAGGAATaGCTTTATTTGATCAGACAGGTCAGAATCTTCCAG +
Preference number: 3 (lower is better)
Translates to: LATSGLGILSEE*LYLIRQVRIFQ
Trigger: CTGGAAGATTCTGACCTGTCTGATCAAATAAAGGCATTCCTCTGAGAGTATACCTAGCCCACTTGTGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp GCTTCTTTATACCACTTAAACATATGCAATGGCAGATaGCCCGGTGACCTAATTCTTCCACGTCTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: ASLYHLNICNGR*PGDLILPRLVL
Trigger: GAGGACAAGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTATAAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp ACTGGAGTAGTTAGACTCTCAGGTCACCAAAATGGCTaGGCATCCAAGTTTCCCATCTTATTAGACATCCTG +
Preference number: 3 (lower is better)
Translates to: TGVVRLSGHQNG*ASKFPILLDIL
Trigger: CAGGATGTCTAATAAGATGGGAAACTTGGATGCCCAGCCATTTTGGTGACCTGAGAGTCTAACTACTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCAATGGAAATTCCCATTaGGTAATATACATTCCAGCC +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFNGNSH*VIYIPA
Trigger: GGCTGGAATGTATATTACCAAATGGGAATTTCCATT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTCAGATTCACTGGACTTaGAATTGCCACATCCTCACA +
Preference number: 3 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLQIHWT*NCHILT
Trigger: TGTGAGGATGTGGCAATTCAAAGTCCAGTGAATCTG...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGTAGGGGGATCAGTGTaGTTATTCACCAATACAAGA +
Preference number: 3 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFVGGSV*LFTNTR
Trigger: TCTTGTATTGGTGAATAACAACACTGATCCCCCTAC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTTTCCATTTTCTCTATaGCTGTCCTCCTTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFFPFSL*LSSFFL
Trigger: AAGGAAAAAGGAGGACAGCAATAGAGAAAATGGAAA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CAGGTTACCCCAGAGTGCTCAATAATCCATGAGAAATaGATCCTATCTTCGTTCCAGGGCTTAGTATTGGCA +
Preference number: 3 (lower is better)
Translates to: QVTPECSIIHEK*ILSSFQGLVLA
Trigger: TGCCAATACTAAGCCCTGGAACGAAGATAGGATTCATTTCTCATGGATTATTGAGCACTCTGGGGTAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp TTTTATTGTTATCAGTGGTTTGTCATCCTCCCCACCTaGAACTACCCTACTGACACTCCCTATTGCCCTACT +
Preference number: 3 (lower is better)
Translates to: FYCYQWFVILPT*NYPTDTPYCPT
Trigger: AGTAGGGCAATAGGGAGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGACAAACCACTGATAACAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CTTTTTGAAGTTAGACATTGTGTGTGGTTTTGGAGCTaGGTTGGGAAGAGGATGGATACGCACCACACCTTA +
Preference number: 3 (lower is better)
Translates to: LFEVRHCVWFWS*VGKRMDTHHTL
Trigger: TAAGGTGTGGTGCGTATCCATCCTCTTCCCAACTCAGCTCCAAAACCACACACAATGTCTAACTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp TATTTTCTACTTGGGGAGAGAGGACTTCCTAGACCCTaGCACAACTACAAGGTCATGAATTCTGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: YFLLGERGLPRP*HNYKVMNSAFV
Trigger: CACAAATGCAGAATTCATGACCTTGTAGTTGTGGCAGGGTCTAGGAAGTCCTCTCTCCCCAAGTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp ATGAAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTaGCCAGAATTTATGAACTTCAAGTATGATGTGAAT +
Preference number: 3 (lower is better)
Translates to: MKEQCLPPQAEQ*PEFMNFKYDVN
Trigger: ATTCACATCATACTTGAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp TGGGCAAAAGCTGCTGCACTGTGTTTAATGCTTCCCTaGTTAAAGTTTTATCAGGTACTGAAGACAGCAGGA +
Preference number: 3 (lower is better)
Translates to: WAKAAALCLMLP*LKFYQVLKTAG
Trigger: TCCTGCTGTCTTCAGTACCTGATAAAACTTTAACCAGGGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp ACAGAGGCAAACCATATCACATGGCTTGTGCACATTTaGAGCAGTACTAGTCTCCATGAAGTCTACATATGG +
Preference number: 3 (lower is better)
Translates to: TEANHITWLVHI*SSTSLHEVYIW
Trigger: CCATATGTAGACTTCATGGAGACTAGTACTGCTCCAAATGTGCACAAGCCATGTGATATGGTTTGCCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTCCACAAGAGTTAATTaGGCCCTACCTTGCTCTCAT +
Preference number: 3 (lower is better)
Translates to: FITLESWHLHCSCHYMQSSTRVN*ALPCSH
Trigger: ATGAGAGCAAGGTAGGGCCAAATTAACTCTTGTGGA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTGGTTTTGCCTCTCGTaGATTTTCTTATTTATGGCC +
Preference number: 3 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFWFCLS*IFLFMA
Trigger: GGCCATAAATAAGAAAATCAACGAGAGGCAAAACCA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp TGTTTGGTAATACAATATTATGGGGGCTGGCTTTCCTaGGTAAGTTCAAAGCAGCCATTGAGGGATTACCTG +
Preference number: 3 (lower is better)
Translates to: CLVIQYYGGWLS*VSSKQPLRDYL
Trigger: CAGGTAATCCCTCAATGGCTGCTTTGAACTTACTCAGGAAAGCCAGCCCCCATAATATTGTATTACCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp GAAAAATCCTTGCCTGGGTACCAAATGGGATGCAGCTaGTTTAGACCATCTCTATATATAATCAGCGTGGCA +
Preference number: 3 (lower is better)
Translates to: EKSLPGYQMGCS*FRPSLYIISVA
Trigger: TGCCACGCTGATTATATATAGAGATGGTCTAAATCAGCTGCATCCCATTTGGTACCCAGGCAAGGATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATACCACTTAAACATATGCAATGGCAGATGCCCCGGTaGCCTAATTCTTCCACGTCTTGTCCTCATAATAGA +
Preference number: 3 (lower is better)
Translates to: IPLKHMQWQMPR*PNSSTSCPHNR
Trigger: TCTATTATGAGGACAAGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp CCTAACAAAGCGATACTGTTTGGTAATACAATATTATaGGGGCTGGCTTTCCTGAGTAAGTTCAAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: PNKAILFGNTIL*GLAFLSKFKAA
Trigger: GGCTGCTTTGAACTTACTCAGGAAAGCCAGCCCCCATAATATTGTATTACCAAACAGTATCGCTTTGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp CTAAAACCAGGAATCAGTAAGAGAGTCCAGATTCACTaGACTTTGAATTGCCACATCCTCACAGAGTACACT +
Preference number: 3 (lower is better)
Translates to: LKPGISKRVQIH*TLNCHILTEYT
Trigger: AGTGTACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTGAATCTGGACTCTCTTACTGATTCCTGGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAAACGTGTAATTCCCTaGAAAGATTCAGTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLKRVIP*KDSVFP
Trigger: AGGGAACACTGAATCTTTCAAGGGAATTACACGTTT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTATTACGACTTTCTGTaGGGTGTCTCTAACTCTGGT +
Preference number: 3 (lower is better)
Translates to: FITLESWHLHCSCHYMQSYYDFL*GVSNSG
Trigger: ACCAGAGTTAGAGACACCCAACAGAAAGTCGTAATA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATGGTGACACTTGTAATTAGGGCTGACAGAAATCTTTaGAGTAGTACGCAAGATAATGAAGGGGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: MVTLVIRADRNL*SSTQDNEGAAL
Trigger: CAAAGCAGCCCCTTCATTATCTTGCGTACTACTTCAAAGATTTCTGTCAGCCCTAATTACAAGTGTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTCGGGAGCACAAAGCTaGGTTGTAAGAAATTGTGAT +
Preference number: 3 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSGAQS*VVRNCD
Trigger: ATCACAATTTCTTACAACCAAGCTTTGTGCTCCCGA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTTAAGTCTGTTCTTTaGCCACTTCCCAGAGCTCTC +
Preference number: 3 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELKSVL*PLPRAL
Trigger: GAGAGCTCTGGGAAGTGGCAAAAGAACAGACTTAAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGGTATGGAAAAATCCTaGCCTGGGTACCAAATGGGA +
Preference number: 3 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTGMEKS*PGYQMG
Trigger: TCCCATTTGGTACCCAGGCAAGGATTTTTCCATACC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp TTAAAGGAGGATATATCTATATGCTGGGAGATGAGCTaGATTCAGAACACATGGAATGGGAACAATTCTCCC +
Preference number: 3 (lower is better)
Translates to: LKEDISICWEMS*IQNTWNGNNSP
Trigger: GGGAGAATTGTTCCCATTCCATGTGTTCTGAATTCAGCTCATCTCCCAGCATATAGATATATCCTCCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp CAACCCAGAGTCTGCTTGGATATGGTTCTAGTTGTATaGTTCGTAAGTGAACACCAAAATACCATAAAGGTA +
Preference number: 3 (lower is better)
Translates to: QPRVCLDMVLVV*FVSEHQNTIKV
Trigger: TACCTTTATGGTATTTTGGTGTTCACTTACGAAGCATACAACTAGAACCATATCCAAGCAGACTCTGGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp CTGCTACCCTTAGACTTTCTTTCCCTCACTGTACATTaGATTTTACAGGCTATACAAAGCAAGACCTTCTTT +
Preference number: 3 (lower is better)
Translates to: LLPLDFLSLTVH*ILQAIQSKTFF
Trigger: AAAGAAGGTCTTGCTTTGTATAGCCTGTAAAATGCAATGTACAGTGAGGGAAAGAAAGTCTAAGGGTAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp AACTGGACTTTTAGGGACTGTCCACAAGAGTTAATTTaGCCCTACCTTGCTCTCATTTATTTCATGCTTCAA +
Preference number: 3 (lower is better)
Translates to: NWTFRDCPQELI*PYLALIYFMLQ
Trigger: TTGAAGCATGAAATAAATGAGAGCAAGGTAGGGCCAAATTAACTCTTGTGGACAGTCCCTAAAAGTCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp CTGGACTTTGAATTGCCACATCCTCACAGAGTACACTaGCGGCTAAGTTTACTAAAATATGAAGATTTCCTT +
Preference number: 3 (lower is better)
Translates to: LDFELPHPHRVH*RLSLLKYEDFL
Trigger: AAGGAAATCTTCATATTTTAGTAAACTTAGCCGCCAGTGTACTCTGTGAGGATGTGGCAATTCAAAGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp TTTCCAAATGCACAGGGGCACCAAGTCCGAACATCCTaGGATAGCAGTAAATCTCTCTTACAAAATAATTTA +
Preference number: 3 (lower is better)
Translates to: FPNAQGHQVRTS*DSSKSLLQNNL
Trigger: TAAATTATTTTGTAAGAGAGATTTACTGCTATCCCAGGATGTTCGGACTTGGTGCCCCTGTGCATTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACTTAGCTCTCAAATATaGTGTGTGTGTGTGCGGACA +
Preference number: 3 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTLSSQI*CVCVRT
Trigger: TGTCCGCACACACACACACAATATTTGAGAGCTAAG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAGGACAATGGATTCATaGGTTCTCCCCATTCATGCA +
Preference number: 3 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTRTMDS*VLPIHA
Trigger: TGCATGAATGGGGAGAACCAATGAATCCATTGTCCT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp ATCAAAGTCCCTCTCAGCATCCAGAAATTCAACATTTaGAAGATAGCCAGAAATTGCTATGAGTATCCGACT +
Preference number: 3 (lower is better)
Translates to: IKVPLSIQKFNI*KIARNCYEYPT
Trigger: AGTCGGATACTCATAGCAATTTCTGGCTATCTTTCAAATGTTGAATTTCTGGATGCTGAGAGGGACTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp CATTACACCATTATTAGATGCAAGCAATTCTTTGATTaGTGGCTCCAACATGGATTAAGGTCAAAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: HYTIIRCKQFFD*WLQHGLRSKVA
Trigger: GGCCACTTTTGACCTTAATCCATGTTGGAGCCATCAATCAAAGAATTGCTTGCATCTAATAATGGTGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp CAATGCAACCTCTGGTCCTTCAAACCAGCTTGGAATTaGTTCATTTACAACTCATTCTATGTTTTCATCAAT +
Preference number: 3 (lower is better)
Translates to: QCNLWSFKPAWN*FIYNSFYVFIN
Trigger: ATTGATGAAAACATAGAATGAGTTGTAAATGAAGCAATTCCAAGCTGGTTTGAAGGACCAGAGGTTGCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAAGAAGATTCATAAATaGGGATGGTCAGCACACAGT +
Preference number: 3 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLKKIHK*GWSAHS
Trigger: ACTGTGTGCTGACCATCCCAATTTATGAATCTTCTT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACATTTTCAAATAAAGTaGAGTAGAGAGCAGAACACC +
Preference number: 3 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEHFQIK*SREQNT
Trigger: GGTGTTCTGCTCTCTACTCAACTTTATTTGAAAATG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAATCCAGTAATAGTTTATaGATTTCCAAATGCACAGGG +
Preference number: 3 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQESSNSL*ISKCTG
Trigger: CCCTGTGCATTTGGAAATCAATAAACTATTACTGGA...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAAACCTCCAAACACATaGTGGTTTGTTAAAACACTG +
Preference number: 3 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTKPPNT*WFVKTL
Trigger: CAGTGTTTTAACAAACCACAATGTGTTTGGAGGTTT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR GCA 72 bp ACACTAAATAACCCATATATCAGGGCTTTGGAGCTTTaGAGTCTACTCAAAATTTCCATTTTCTCTATTGCT +
Preference number: 3 (lower is better)
Translates to: TLNNPYIRALEL*SLLKISIFSIA
Trigger: AGCAATAGAGAAAATGGAAATTTTGAGTAGACTGCAAAGCTCCAAAGCCCTGATATATGGGTTATTTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR TCA 72 bp TATTACAGGTTAAATTGTGTAACACTCAACTTGCGCTaGGGTCCAGTTTCTTTTTATTATGCTCCAATTTTG +
Preference number: 3 (lower is better)
Translates to: YYRLNCVTLNLR*GPVSFYYAPIL
Trigger: CAAAATTGGAGCATAATAAAAAGAAACTGGACCTCAGCGCAAGTTGAGTGTTACACAATTTAACCTGTAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CCA 72 bp TGTCTTATGCGTTTGCTTCATGGTATTTATTTCAATTaGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTC +
Preference number: 3 (lower is better)
Translates to: CLMRLLHGIYFN*LEALFAYFLIL
Trigger: GAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAATAAATACCATGAAGCAAACGCATAAGACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTCTCGAAGCGGGACCTaGGGCCGCGGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREASRSGT*GRGSPC
Trigger: GCAGGGGCTGCCGCGGCCCCAGGTCCCGCTTCGAGA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTGAGTCGCCTCCCGCCTaGACCGCGCCGCGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAESPPA*TAPRLE
Trigger: TTCGAGACGCGGCGCGGTCCAGGCGGGAGGCGACTC...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGGCGGGGTCCAGGCCTaGGAGCCGTGGACGTATTCG +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEGGVQA*EPWTYS
Trigger: CGAATACGTCCACGGCTCCCAGGCCTGGACCCCGCC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTCCCTGCGCTTCCTCTaGCGCGCAAGGCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREASLRFL*RARHFR
Trigger: CCGGAAGTGCCTTGCGCGGCAGAGGAAGCGCAGGGA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAAGGAACTTCTGCCTGTaGGCCTCGGCATGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQERNFCL*ASAWRR
Trigger: CCGCCGCCATGCCGAGGCGCACAGGCAGAAGTTCCT...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGGAAGGTGCCTTTTGGTaGTGCCACCTGCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLEGAFW*CHLLWT
Trigger: TGTCCAAAGCAGGTGGCACCACCAAAAGGCACCTTC...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGACCACAACCAGGGGATaGGAAGCACACAGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLTTTRG*EAHSKH
Trigger: ATGCTTACTGTGTGCTTCTCATCCCCTGGTTGTGGT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGGAAAGCAAGCAGAGGTaGATGTATCCTGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLESKQR*MYPVVA
Trigger: TGCCACTACAGGATACATTCACCTCTGCTTGCTTTC...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGGTGTGTGGTACAAAGTaGCTGTCCACAGAATTAGGG +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLVCGTK*LSTELG
Trigger: CCCTAATTCTGTGGACAGGCACTTTGTACCACACAC...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGAATATGAAGGAGCAATaGCTGCCTCCTCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLNMKEQ*LPPQAE
Trigger: CTCAGCTTGAGGAGGCAGGCATTGCTCCTTCATATT...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCCAGGGTGTGGGAGATaGTCTGAAGGTCTATGGGTG +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAPGCGR*SEGLWV
Trigger: CACCCATAGACCTTCAGATCATCTCCCACACCCTGG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAGGTTTCAGCAAACCCTaGCACCTGCACCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGGFSKP*HLHPGK
Trigger: CTTGCCTGGGTGCAGGTGGCAGGGTTTGCTGAAACC...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGCACTGGACTTTGAATTaGCACATCCTCACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLHWTLN*HILTEY
Trigger: GTACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTG...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTTCACTGGCACCACTaGGTCCTTCCTCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLHWHH*VLPHRP
Trigger: AGGGCGATGAGGAAGGACCCAGTGGTGCCAGTGAAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGTCGTTTTCCTACTGCTaGTTGTACTGTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLSFSYC*LYCSEV
Trigger: CACTTCTGAACAGTACAATCAGCAGTAGGAAAACGA...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTACAGTGGCAGGCAGTaGCACCCCACCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFYSGRQ*HPTRQQ
Trigger: CTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGTGGTGTTGAGATACTaGCACCAGGAAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEVVLRY*HQEAGK
Trigger: CTTCCCTGCTTCCTGGTGCCAGTATCTCAACACCAC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGCCATGTGGGTGCTGTaGCGCGGCCAAGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSAMWVL*RGQGLG
Trigger: CCCGAGGCCTTGGCCGCGTCACAGCACCCACATGGC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGATCAGGGCTGTCACTTTaGCTCAGTGCCTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGSGLSL*LSALGA
Trigger: AGCTCCTAAGGCACTGAGTCAAAGTGACAGCCCTGA...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAATATGAAGCTGGCCTaGCGTCAAGCTGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLENMKLA*RQAVGE
Trigger: CTCTCCAACAGCTTGACGTCAGGCCAGCTTCATATT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCTACAGTGGCAGGCAGTGCCACCCCACCAGGCAGCAGTGTCCTCCGCAACTGTCAATTTCTTACTCTTaGAGAATGACCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CYSGRQCHPTRQQCPPQLSISYS*RMTQAE
Trigger: CTCAGCTTGGGTCATTCTTCAAGAGTAAGAAATTGA...CAGTTGCGGAGGACACTGCTGCCTGGTGGGGTGGCACTGCCTGCCACTGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAATGGTACAGAGGGCTATaGAACAGCCATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEWYRGL*NSHGEH
Trigger: ATGCTCCCCATGGCTGTTTCATAGCCCTCTGTACCA...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGCTCTGGCCCTCGTTCTaGTGTTTCTGGTATGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLELWPSF*CFWYVL
Trigger: GAGAACATACCAGAAACAGCAGAACGAGGGCCAGAG...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTTTGGTGGTGCCACCTaGTTTGGACACTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEFGGAT*FGHSFW
Trigger: CCAGAATGAGTGTCCAAAGCAGGTGGCACCACCAAA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCCCCTCTCCGTCAGCTaGCGGGGTCCAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSPLSVS*RGPGLG
Trigger: TCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTGGGGAGCCTGAACTTTaGATCACTTCTGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAGEPEL*ITSDCL
Trigger: AAGGCAGTCAGAAGTGATCCAAAGTTCAGGCTCCCC...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGCTATGAAACAGCCATaGGGAGCATCTAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEAMKQP*GASRGE
Trigger: CTCACCTCTAGATGCTCCCCATGGCTGTTTCATAGC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAACTTCAAGTATGATGTaGATCTGGGGTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGTSSMM*IWGPSQ
Trigger: CTGGCTCGGACCCCAGATTCACATCATACTTGAAGT...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAGTGTCCTCCGCAACTaGGGAAGAGGAAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQSVLRN*GRGSRA
Trigger: GGCCCTACTTCCTCTTCCCCAGTTGCGGAGGACACT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTCAGGCCAGAAGATTTaGCTGCTACCCTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLESGQKI*LLPLDF
Trigger: AAAGTCTAAGGGTAGCAGTCAAATCTTCTGGCCTGA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTGGCAGATGCCCCGGTaGCCTAATTCTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFWQMPR*PNSSTS
Trigger: AGACGTGGAAGAATTAGGTCACCGGGGCATCTGCCA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGGAGCAGGGATGGGAGTaGGGCTTCTCAACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWEQGWE*GFSTLF
Trigger: GAAGAGAGTTGAGAAGCCTCACTCCCATCCCTGCTC...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTGTAGAGAGAGAACATaGTGTGCCAAATGCCACACA +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLECRERT*CAKCHT
Trigger: TGTGTGGCATTTGGCACATCATGTTCTCTCTCTACA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTCTATCTCCCTCTCCTaGTCCACCTTGACCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFSISLS*STLTSA
Trigger: AGCGGAGGTCAAGGTGGAGCAGGAGAGGGAGATAGA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAACTGGGCAAAAGCTGCTaGACTGTGTTTAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQELGKSC*TVFNAS
Trigger: GGAAGCATTAAACACAGTGCAGCAGCTTTTGCCCAG...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCCGGACACTTCCTCTTaGCCACTCTCTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQPDTSS*PLSLLP
Trigger: TGGAAGCAGAGAGAGTGGCCAAGAGGAAGTGTCCGG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTATCAACCTATCCATGTaGGATTGGATGTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAINLSM*DWMSAS
Trigger: ACTGGCAGACATCCAATCCCACATGGATAGGTTGAT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAAAACTGGTCATCCCTTaGAGAGATATGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEKLVIP*RDMCLL
Trigger: CAGCAGGCACATATCTCTCCAAGGGATGACCAGTTT...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGTTCATTTTTCTGCTCTaGCCCTCGTTCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEFIFLL*PSFCCF
Trigger: GAAACAGCAGAACGAGGGCCAGAGCAGAAAAATGAA...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGATTGAGTCTTCACATTTaGCTCCTGAAGGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLSLHI*LLKASE
Trigger: CTCAGAGGCCTTCAGGAGCCAAATGTGAAGACTCAA...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAGAGTTGGGAAGAGGATaGATACGCACCACACCTTAT +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEELGRG*IRTTPY
Trigger: ATAAGGTGTGGTGCGTATCCATCCTCTTCCCAACTC...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTTGGCCACTCTCTCTaGTTCCATTTCTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLGHSL*FHFYFW
Trigger: CCAGAAATAGAAATGGAAGCAGAGAGAGTGGCCAAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCCCTTGGAGAGATATGTaGCTGCTGTGGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFPWRDM*LLWIWG
Trigger: TCCCCAGATCCACAGCAGGCACATATCTCTCCAAGG...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACAGCAACCCAGAGTCTaGTTGGATATGGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGQQPRV*LDMVLV
Trigger: AACTAGAACCATATCCAAGCAGACTCTGGGTTGCTG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCCTTTGCTAGGGAATTaGTCTTCCTGTAAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAPLLGN*SSCKQV
Trigger: TACTTGCTTACAGGAAGAGCAATTCCCTAGCAAAGG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCTGAAGACTCCTAAGTaGTACAGTGGCAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQLKTPK*YSGRQC
Trigger: GCACTGCCTGCCACTGTAGCACTTAGGAGTCTTCAG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGCAGGTTACCCCAGAGTaGTCAATAATCCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEQVTPE*SIIHEK
Trigger: TTTCTCATGGATTATTGAGCACTCTGGGGTAACCTG...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAAATCTGAGAATTTGTaGCTGGAATCCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEKSENL*LESMRL
Trigger: GAGCCTCATGGATTCCAGGCACAAATTCTCAGATTT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGGTGAGCCCCAATGACTaGACACAGGACACAGATGAG +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQVSPND*TQDTDE
Trigger: CTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCAC...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAGAGTCCAGATTCACTaGACTTTGAATTGCCACATC +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLERVQIH*TLNCHI
Trigger: GATGTGGCAATTCAAAGTCCAGTGAATCTGGACTCT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAGGACAATGGATTCATTaGTTCTCCCCATTCATGCAG +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEGQWIH*FSPFMQ
Trigger: CTGCATGAATGGGGAGAACCAATGAATCCATTGTCC...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGATTTCAATGCAACCTCTaGTCCTTCAAACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGFQCNL*SFKPAW
Trigger: CCAAGCTGGTTTGAAGGACCAGAGGTTGCATTGAAA...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTATCCTGTAGTGGCATaGCTTCAACAGAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAYPVVA*LQQSIC
Trigger: ACAAATGCTCTGTTGAAGCCATGCCACTACAGGATA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCAATGGATGTGGTGTTaGGATACTGGCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQQWMWC*DTGTRK
Trigger: CTTCCTGGTGCCAGTATCTCAACACCACATCCATTG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAACTCTGGTGCCTTGTaGAGGCCAGGAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQNSGAL*RPGDIP
Trigger: TGGAATATCTCCTGGCCTTCACAAGGCACCAGAGTT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTCTGGAGAAATACAAGTaGGAACCTGTTATTACAGGT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREALEKYK*EPVITG
Trigger: ACCTGTAATAACAGGTTCTCACTTGTATTTCTCCAG...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTCTCACCCTGAAATATaGAGGAGCAATGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQSHPEI*RSNACL
Trigger: GAGGCAGGCATTGCTCCTTCATATTTCAGGGTGAGA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCCTGAAACTACCCTACTaGCACTCCCTATTGCCCTAC +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFLKLPY*HSLLPY
Trigger: GTAGGGCAATAGGGAGTGTCAGTAGGGTAGTTTCAG...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAGGAATGCCTTTATTTaGTCAGACAGGTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLERNAFI*SDRSES
Trigger: AGATTCTGACCTGTCTGATCAAATAAAGGCATTCCT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAAGAATGACCCAAGCTaGGAAATTTCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEKNDPS*EISQTS
Trigger: AGATGTTTGGGAAATTTCTCAGCTTGGGTCATTCTT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAAAGAACTCACTATCATaGCAACAAAGGGCGGATGTT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGKNSLS*QQRADV
Trigger: AACATCCGCCCTTTGTTGTCATGATAGTGAGTTCTT...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATGGAGAGATATGTGCCTaGTGTGGATCTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNGEICA*CGSGDT
Trigger: TGTGTCCCCAGATCCACAGCAGGCACATATCTCTCC...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACAAGGTCATGAATTCTaGATTTGTGCCCTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGQGHEF*ICALRS
Trigger: AGACCTAAGGGCACAAATGCAGAATTCATGACCTTG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGGACTTCCTAGACCCTaGCACAACTACAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFGLPRP*HNYKVM
Trigger: CATGACCTTGTAGTTGTGGCAGGGTCTAGGAAGTCC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTTATTTTCATTTTTCTaGTCTGGCCCTCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREALFSFF*SGPRSA
Trigger: AGCAGAACGAGGGCCAGAGCAGAAAAATGAAAATAA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCACCAGCCTGGCTTGTTaGGTGACCTTGAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFTSLAC*VTLSDL
Trigger: TAAGTCACTCAAGGTCACCCAACAAGCCAGGCTGGT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAATTACGACTTTCTGTTaGGTGTCTCTAACTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGITTFC*VSLTLV
Trigger: CACCAGAGTTAGAGACACCCAACAGAAAGTCGTAAT...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCCAACAGGAGAGTACCTaGCCCAGAGAAAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFQQEST*PRERAK
Trigger: CTTAGCTCTTTCTCTGGGCCAGGTACTCTCCTGTTG...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGGTCAAAAGTGGCCCTaGAGACCAAATTCCCTAGTG +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFGQKWP*RPNSLV
Trigger: CACTAGGGAATTTGGTCTCCAGGGCCACTTTTGACC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp GGTAGTGCCACTGCAGGAAGCATCCTAGTTCTTACATaGATAAATGCTGCCGGCAGGAACTTAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSATAGSILVLT*INAAGRNLEAW
Trigger: CCAGGCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGTAAGAACTAGGATGCTTCCTGCAGTGGCACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGTCACACGTGCCGTCGTaGGGCAGTTCCTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLSHVPS*GSSSKA
Trigger: GGCCTTCGAGGAACTGCCTCACGACGGCACGTGTGA...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCAGCCCTTCACGTTGTaGCAAGCCCATAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFQPFTL*QAHKTC
Trigger: GCAGGTTTTATGGGCTTGTCACAACGTGAAGGGCTG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAACAAAAGTGCTTTCCTTaGGGATCACAGAGATATGAT +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEQKCFP*GSQRYD
Trigger: ATCATATCTCTGTGATCCTCAAGGAAAGCACTTTTG...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGCTGACAGAAATCTTTaGAGTAGTACGCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEADRNL*SSTQDN
Trigger: ATTATCTTGCGTACTACTTCAAAGATTTCTGTCAGC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAGGTTTGTTAAAACACTaGAGACTCCTAAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEGLLKH*RLLSAT
Trigger: TGTAGCACTTAGGAGTCTTCAGTGTTTTAACAAACC...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTGAGGCTCTTAAAGATTaGGATGTGTATAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: CRLHSKHDAGICSASREAEALKD*DVYRLF
Trigger: AAACAGTCTATACACATCTCAATCTTTAAGAGCCTC...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGTCATCCTCCCCACCTaGAACTACCCTACTGACACT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFVILPT*NYPTDT
Trigger: AGTGTCAGTAGGGTAGTTTCAGGTGGGGAGGATGAC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGACTTTGGATCACTTCTaGCTGCCTTGTGAACTAGGC +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWTLDHF*LPCELG
Trigger: GCCTAGTTCACAAGGCAGTCAGAAGTGATCCAAAGT...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACAGAGGCCATGTGGGTaGTGTGACGCGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEQRPCG*CDAAKA
Trigger: GGCCTTGGCCGCGTCACAGCACCCACATGGCCTCTG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGATGGTTCTAGTTGTATaGTTCGTAAGTGAACACCAA +
Preference number: 4 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEMVLVV*FVSEHQ
Trigger: TTGGTGTTCACTTACGAAGCATACAACTAGAACCAT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAGGGAAGCCTCATCATaGTGGGGCTTAAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLREASS*WGLRPS
Trigger: GCTTGGCCTTAAGCCCCAGCATGATGAGGCTTCCCT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGGCCAGGTCCCTTATTTaGTCTGCAAGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQARSLI*SASLPF
Trigger: AAATGGCAGACTTGCAGAGCAAATAAGGGACCTGGC...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATATTGGCTCACAGTTCTaGAGGCTGCACAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNIGSQF*RLHSKH
Trigger: ATGCTTGCTGTGCAGCCTGCAGAACTGTGAGCCAAT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCAGGCCTGGGAGCCGTaGACGTATTCGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLQAWEP*TYSARW
Trigger: CCATCTGGCCGAATACGTCCACGGCTCCCAGGCCTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTGCCTGGGTACCAAATaGGATGCAGCTGATTTAGAC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQCLGTK*DAADLD
Trigger: GTCTAAATCAGCTGCATCCCATTTGGTACCCAGGCA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGATCATTGGGAAGTGGTaGACAATTTCCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQIIGKW*TISLSL
Trigger: GAGGGAGAGGGAAATTGTCCACCACTTCCCAATGAT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp GTGGATCTGGGGACACATCTGGTGGAAGTACGTTTGTaGCTGAGCAGCTTTCACAGAAATCAGAAGCCGTTA +
Preference number: 4 (lower is better)
Translates to: VDLGTHLVEVRL*LSSFHRNQKPL
Trigger: TAACGGCTTCTGATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAGATGTGTCCCCAGATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAGTTGGTGGCCCTGGTaGGCCCCAATGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLSWWPW*APMTGH
Trigger: GTGTCCAGTCATTGGGGCTCACCAGGGCCACCAACT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTTGGATGTCCACTAGATaGAGGGCCTTCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLWMSTR*RAFCSS
Trigger: TGAGGAGCAGAAGGCCCTTCATCTAGTGGACATCCA...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWCLWLS*FIRGIK
Trigger: CTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCA...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGTGTGGGAGATGATCTaGAGGTCTATGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSVWEMI*RSMGGE
Trigger: CTCCCCACCCATAGACCTTCAGATCATCTCCCACAC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAAAGGTAGAGGAGAGTaGACACATAACCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQKGRGE*THNPLA
Trigger: TGCAAGTGGGTTATGTGTTCACTCTCCTCTACCTTT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCCTCAATGCCATTTCTaGGCCCTAACTATAACTGTG +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWPQCHF*ALTITV
Trigger: CACAGTTATAGTTAGGGCTCAGAAATGGCATTGAGG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACATAAAAATCTGATGTaGTCAGCACACAGTAAACGT +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGHKNLM*SAHSKR
Trigger: ACGTTTACTGTGTGCTGATCACATCAGATTTTTATG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCTTTGTGCACAACTCTaGGAGACAAATGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQLCAQL*ETNGIS
Trigger: GGAAATGCCATTTGTCTCTCAGAGTTGTGCACAAAG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACAGGAAAGCTTGTTTTaGGTACATAACAGTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGQESLF*VHNSQV
Trigger: TACTTGACTGTTATGTACTCAAAACAAGCTTTCCTG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTAAGCAAACAAGCCCATaGCTTGGCTATTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFKQTSP*LGYSEG
Trigger: CCCCTCTGAATAGCCAAGTCATGGGCTTGTTTGCTT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCGCACTCGTCACACGTaGCGTCGTGAGGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLRTRHT*RREAVP
Trigger: AGGAACTGCCTCACGACGGCACGTGTGACGAGTGCG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGAGGACCTTTCTTAATTaGTCCTGGTGGATCAAAGGG +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWRTFLN*SWWIKG
Trigger: CCCTTTGATCCACCAGGAGCAATTAAGAAAGGTCCT...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATAGAAGCATATATGCCTaGGAGCTTCCTGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNRSIYA*ELPGLK
Trigger: TTTGAGGCCAGGAAGCTCCCAGGCATATATGCTTCT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCCTTCTGTTTTTAGGTaGACCATGGTGTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWPSVFR*TMVCGT
Trigger: TGTACCACACACCATGGTCCACCTAAAAACAGAAGG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGGTCACCAAAATGGCTaGGCATCCAAGTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFGHQNG*ASKFPI
Trigger: GATGGGAAACTTGGATGCCCAGCCATTTTGGTGACC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCTCTTAGAGCTGGGCTaGACTCAATCCATAATGAGA +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWLLELG*TQSIMR
Trigger: TCTCATTATGGATTGAGTCCAGCCCAGCTCTAAGAG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGGCAAACCATATCACATaGCTTGTGCACATTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWANHIT*LVHIWS
Trigger: GCTCCAAATGTGCACAAGCCATGTGATATGGTTTGC...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCACAACTACAAGGTCATaGATTCTGCATTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFTTTRS*ILHLCP
Trigger: AGGGCACAAATGCAGAATTCATGACCTTGTAGTTGT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTAACCTCCTCTTAATTTaGTCTCCTGGCCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFNLLLI*SPGLGH
Trigger: ATGTCCCAGGCCAGGAGATCAAATTAAGAGGAGGTT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGAGAAAACTCCCCCATaGTCCAATCTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSEKTPP*SNLPTR
Trigger: CCTGGTGGGAAGATTGGATCATGGGGGAGTTTTCTC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTAGCCTGGGCAAAAGCTaGTGCACTGTGTTTAATGCT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFSLGKS*CTVFNA
Trigger: AGCATTAAACACAGTGCAGCAGCTTTTGCCCAGGCT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGGTTCTCCCCATTCATaGAGTGTGGCCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSGSPHS*SVACHC
Trigger: ACAGTGACAGGCCACACTGCATGAATGGGGAGAACC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCAGATAAGCTCCTTTTaGTGTTGTCCCTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWQISSF*CCPFPR
Trigger: TCTTGGAAAGGGACAACAGCAAAAGGAGCTTATCTG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGGTATGGAAAAATCCTTaGCTGGGTACCAAATGGGAT +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWVWKNP*LGTKWD
Trigger: ATCCCATTTGGTACCCAGGCAAGGATTTTTCCATAC...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATCTATCCATGTGGGATTaGATGTCTGCCAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNLSMWD*MSASIS
Trigger: TGAGATACTGGCAGACATCCAATCCCACATGGATAG...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGGTAATACAATATTATaGGGGCTGGCTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFGNTIL*GLAFLS
Trigger: ACTCAGGAAAGCCAGCCCCCATAATATTGTATTACC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCCACAAGAGTTAATTTaGCCCTACCTTGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQPQELI*PYLALI
Trigger: AATGAGAGCAAGGTAGGGCCAAATTAACTCTTGTGG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCTGAAGGTCTATGGGTaGGGAGTGCCACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSLKVYG*GVPQEE
Trigger: TTCTTCCTGTGGCACTCCCCACCCATAGACCTTCAG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAGGAACTTAGAAGCCTaGGCAAAAGCTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLRNLEA*AKAAAL
Trigger: CAGTGCAGCAGCTTTTGCCCAGGCTTCTAAGTTCCT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCCTCACAGAGTACACTaGCGGCTAAGTTTACTAAAA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQPHRVH*RLSLLK
Trigger: TTTTAGTAAACTTAGCCGCCAGTGTACTCTGTGAGG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTTGATGGCTCCAACATaGATTAAGGTCAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQLMAPT*IKVKSG
Trigger: GCCACTTTTGACCTTAATCCATGTTGGAGCCATCAA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATTTTCAACATGAGATTTaGGTGGGGACACAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNFQHEI*VGTQRQ
Trigger: TTGCCTCTGTGTCCCCACCCAAATCTCATGTTGAAA...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCGGCCAGATGGTGACTaGGGAACTTCTGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLRPDGD*GTSACA
Trigger: CGCACAGGCAGAAGTTCCTCAGTCACCATCTGGCCG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGAGGCCTCTGAGTATATaGCTTCTGATTTCAATGCAA +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWRPLSI*LLISMQ
Trigger: TTGCATTGAAATCAGAAGTCATATACTCAGAGGCCT...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGCATTTGTCTCACCCTaGAATATGAAGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFAFVSP*NMKEQC
Trigger: GCATTGCTCCTTCATATTTCAGGGTGAGACAAATGC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTTTTGCATGTCCTCATaGGGCTGTTTCAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQFCMSS*GCFSDY
Trigger: ATAATCACTGAAACAGCCTCATGAGGACATGCAAAA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCAAACATCTGAAATCTaGGAATTTGTGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWQTSEI*EFVPGI
Trigger: GATTCCAGGCACAAATTCTCAGATTTCAGATGTTTG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTTGCAGGGTCCTTTGTaGACAACTCTGAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFLQGPL*TTLRDK
Trigger: TTTGTCTCTCAGAGTTGTGCACAAAGGACCCTGCAA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTATATGCAATGGCAGATaGCCCGGTGACCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFICNGR*PGDLIL
Trigger: AAGAATTAGGTCACCGGGGCATCTGCCATTGCATAT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTGTCCTCTTCTTCACTaGCACCACTGGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIICPLLH*HHWVLP
Trigger: AGGAAGGACCCAGTGGTGCCAGTGAAGAAGAGGACA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTCCAGATACACCTGCTaGTGGGTTTTAGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQSRYTC*WVLGFL
Trigger: TAAAAATCCTAAAACCCACCAGCAGGTGTATCTGGA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGTCTTCCCTCTTTTCATaGGAAAAGAAGGTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWSSLFS*EKKVPF
Trigger: AAAAGGCACCTTCTTTTCCCATGAAAAGAGGGAAGA...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp TGTACATGTGTGGGGGTAGTTGTAGGGGGATCAGTGTaGTTATTCACCAATACAAGATGGAATCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTCVGVVVGGSV*LFTNTRWNQCS
Trigger: GCTGCACTGATTCCATCTTGTATTGGTGAATAACAACACTGATCCCCCTACAACTACCCCCACACATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGACACAGGACACAGATaGGCTGCCTATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEDTGHR*AAYLPG
Trigger: GCCAGGAAGATAGGCAGCTCATCTGTGTCCTGTGTC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTTGCTGGGAGATGAGCTaGATTCAGAACACATGGAAT +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLCWEMS*IQNTWN
Trigger: ATTCCATGTGTTCTGAATTCAGCTCATCTCCCAGCA...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTATGAAGGGGCTGCTTTaGGTTTTCCTTAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLMKGLL*VFLSSQ
Trigger: TTGAGAGCTAAGGAAAACTCAAAGCAGCCCCTTCAT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTGCACAGCCATTATATaGATGTGGAATTTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQCTAII*MWNFRN
Trigger: ATTCCTGAAATTCCACATTCATATAATGGCTGTGCA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCCCTTTCCAAGAATATaGAGCTGGCCTGACGTCAAG +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIPFPRI*SWPDVK
Trigger: CTTGACGTCAGGCCAGCTTCATATTCTTGGAAAGGG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTGTGCCTGGAATCCATaGGGCTCATGGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIICAWNP*GSWFPD
Trigger: ATCTGGAAACCATGAGCCTCATGGATTCCAGGCACA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCAGACATCAACCTTATaGACAAGTAAATACATACGG +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQQTSTL*TSKYIR
Trigger: CCGTATGTATTTACTTGTTCATAAGGTTGATGTCTG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGTCTATGGGTGGGGAGTaGCACAGGAAGAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLSMGGE*HRKKGS
Trigger: AGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGA...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCCCCTAGTACATCCCTaGTTACTCGGGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLPLVHP*LLGSTK
Trigger: CTTTGTGCTCCCGAGTAAGCAGGGATGTACTAGGGG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGATGCTTCAAGAAGATaGAGGTTTTTAAGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFDASRR*RFLSLQ
Trigger: CTGCAAACTTAAAAACCTGCATCTTCTTGAAGCATC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAAGGGATTTCCCCCAGTaGAGGCTCCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQERDFPQ*RLLWFC
Trigger: GCAGAACCAAAGGAGCCTGCACTGGGGGAAATCCCT...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCCCTCCAGATACACCTaGTGGTGGGTTTTAGGATTT +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSPSRYT*WWVLGF
Trigger: AAATCCTAAAACCCACCAGCAGGTGTATCTGGAGGG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGATGTTTTTACAGTCATaGAGTGTTGAAAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQMFLQS*SVESSA
Trigger: TGCACTGCTTTCAACACTGCATGACTGTAAAAACAT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCCTCAAATCAAGCCCATaGTCCGGACACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPLKSSP*SGHFLL
Trigger: CAAGAGGAAGTGTCCGGACCATGGGCTTGATTTGAG...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACCTAACTCCTGGGGGTaGGCTCAAGTCAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEPNSWG*AQVSNV
Trigger: CACATTGCTGACTTGAGCCCACCCCCAGGAGTTAGG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGAGAGTCTGCTGTCCTaGGCTTTACCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEESLLS*ALPAWL
Trigger: AAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTATTATCATTGGGAAGTaGTGGACAATTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFIIIGK*WTISLS
Trigger: GGAGAGGGAAATTGTCCACCACTTCCCAATGATAAT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGGAGTAGAGGCAGGGTaGAGTGATAAAAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEGVEAG*SDKREG
Trigger: CCCCTCCCTTTTATCACTCCACCCTGCCTCTACTCC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCACACAACTTGTCAGTaGCAGAGCAGGGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLHTTCQ*QSRDGS
Trigger: ACTCCCATCCCTGCTCTGCCACTGACAAGTTGTGTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp CAGCTCGTCATAAATATTTACACCTTGCAGGGTCCTTaGTGCACAACTCTGAGAGACAAATGGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: QLVINIYTLQGP*CTTLRDKWHFQ
Trigger: CTGGAAATGCCATTTGTCTCTCAGAGTTGTGCACAAAGGACCCTGCAAGGTGTAAATATTTATGACGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAAGTACGTTTGTTGCTaGGCAGCTTTCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLKYVCC*AAFTEI
Trigger: GATTTCTGTGAAAGCTGCTCAGCAACAAACGTACTT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGCAGGGAGAAAACTCTaGCTTCCCTTCAAGATTATT +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLAGRKL*LPFKII
Trigger: AATAATCTTGAAGGGAAGTCAGAGTTTTCTCCCTGC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATGTTCAAGATTTGGCTTaGGTATTTCCTAGCTGTATA +
Preference number: 4 (lower is better)
Translates to: SEATNGHPQAREPYLDSNVQDLA*VFPSCI
Trigger: TATACAGCTAGGAAATACTCAAGCCAAATCTTGAAC...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTGTGGGATTGGATGTCTaGCAGTATCTCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIVGLDV*QYLSHM
Trigger: CATGTGACTGAGATACTGGCAGACATCCAATCCCAC...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTCTTACATTGATAAATaGTGCCGGCAGGAACTTAGA +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFSYIDK*CRQELR
Trigger: TCTAAGTTCCTGCCGGCAGCATTTATCAATGTAAGA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTCCAGAATCAAGAACTaGCTGAGTCTTATGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFSRIKN*LSLMVS
Trigger: AGAAACCATAAGACTCAGGCAGTTCTTGATTCTGGA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTAAAGGCAAACTCCTTTaGCCCAAGGCCATACTGTAC +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIKGKLL*PKAILY
Trigger: GTACAGTATGGCCTTGGGGCAAAGGAGTTTGCCTTT...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAAGAAGACATGGTTTTaGCTCTCGTTGATTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQKKTWF*LSLIFL
Trigger: TAAGAAAATCAACGAGAGGCAAAACCATGTCTTCTT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGCTACCATTTCTAAGTaGTTACTATGTGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLATISK*LLCVRH
Trigger: GTGCCTGACACATAGTAAGCACTTAGAAATGGTAGC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACATGATGCTGGCATCTaGTCAGCTTCTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEHDAGI*SASREA
Trigger: AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCAGTCACATGAGCTGTaGCCATTGCCTCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLQSHEL*PLPLGC
Trigger: ACATCCAAGAGGCAATGGCCACAGCTCATGTGACTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTATCTGGGGACACATCTaGTGGAAGTACGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIIWGHI*WKYVCC
Trigger: GCAACAAACGTACTTCCACCAGATGTGTCCCCAGAT...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCTTAATTGCTCCTGGTaGATCAAAGGGGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSLNCSW*IKGALF
Trigger: GAAAAGAGCCCCTTTGATCCACCAGGAGCAATTAAG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCCAGGAAGAAGGGTTCTaGTCGGAGTTAAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPQEEGF*SELKED
Trigger: ATCCTCCTTTAACTCCGACCAGAACCCTTCTTCCTG...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCACATATGATCAGATATaGAGAACCAATGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFTYDQI*RTNDLS
Trigger: AGACAGATCATTGGTTCTCCATATCTGATCATATGT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGAAGCCTCATCATGCTaGGGCTTAAGGCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTEASSC*GLRPSS
Trigger: GCTGCTTGGCCTTAAGCCCCAGCATGATGAGGCTTC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATAGGCAGAGGACAATaGATTCATTGGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSIGRGQ*IHWFSP
Trigger: TGGGGAGAACCAATGAATCCATTGTCCTCTGCCTAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCAAGTCCGAACATCCTaGGATAGCAGTAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSQVRTS*DSSKSL
Trigger: GAGAGATTTACTGCTATCCCAGGATGTTCGGACTTG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGAAATGGGGCCATGTTaGACCAAACAAAGAGTAATA +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFEMGPC*TKQRVI
Trigger: TATTACTCTTTGTTTGGTCCAACATGGCCCCATTTC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCCAGAGAACCATACTTaGACTCAAATGTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWPENHT*TQMFLR
Trigger: TCTTAAAAACATTTGAGTCCAAGTATGGTTCTCTGG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAGGTCTCATAATGTGTaGAGAGAAACCAAATATAGA +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQRSHNV*RETKYR
Trigger: TCTATATTTGGTTTCTCTCCACACATTATGAGACCT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCTACTTGTTATCAAATaGGAAATTGGCTTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQLLVIK*EIGLSV
Trigger: AACACTCAAGCCAATTTCCCATTTGATAACAAGTAG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTATCTGGAGTACCTCTaGATATGGGCATTATCAAGA +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFYLEYL*IWALSR
Trigger: TCTTGATAATGCCCATATCCAGAGGTACTCCAGATA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAAAGAAGGTGCCTTTTaGTGGTGCCACCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLKEGAF*WCHLLW
Trigger: CCAAAGCAGGTGGCACCACCAAAAGGCACCTTCTTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGCATGAAGTCTACATATaGATTCAGCTTTCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQHEVYI*IQLSLY
Trigger: ATACAAGGAAAGCTGAATCCATATGTAGACTTCATG...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp GCTGAGAAATTTCCCAAACATCTGAAATCTGAGAATTaGTGCCTGGAATCCATGAGGCTCATGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AEKFPKHLKSEN*CLESMRLMVSR
Trigger: TCTGGAAACCATGAGCCTCATGGATTCCAGGCACAAATTCTCAGATTTCAGATGTTTGGGAAATTTCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTATTCGGCCAGATGGTaGCTGAGGAACTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLYSARW*LRNFCL
Trigger: CAGGCAGAAGTTCCTCAGTCACCATCTGGCCGAATA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCTCTCTAACTTTTACTaGCCTGGCAGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLLSNFY*PGRREA
Trigger: GGCTTCCCTCCTGCCAGGTCAGTAAAAGTTAGAGAG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCCCTTTTCTACAGGAGTaGAGCTGCAGACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSPFLQE*SCRHFQ
Trigger: TTGAAAATGTCTGCAGCTTCACTCCTGTAGAAAAGG...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGGTATGCTGTGGCCGTaGCAGCTGAACTCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTGMLWP*QLNSVS
Trigger: ACTTACTGAGTTCAGCTGTCACGGCCACAGCATACC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATGCAAGCAATTCTTTaGTTGATGGCTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSMQAIL*LMAPTW
Trigger: CCATGTTGGAGCCATCAATCAAAGAATTGCTTGCAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGGTGGCTCCATCTACTaGATCTCTAACAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEGGSIY*ISNRTP
Trigger: TGGAGTCCTGTTAGAGATTCAGTAGATGGAGCCACC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGTCCACCTGAGTCTTTaGTTCTTAATTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLVHLSL*FLILQR
Trigger: CCTTTGAAGAATTAAGAAGCAAAGACTCAGGTGGAC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCAAGCCCATAAAACCTaGAGAATTCACCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFQAHKT*RIHPNN
Trigger: ATTATTTGGGTGAATTCTGCAGGTTTTATGGGCTTG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTACATTGATAAATGCTaGCGGCAGGAACTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSYIDKC*RQELRS
Trigger: GCTTCTAAGTTCCTGCCGGCAGCATTTATCAATGTA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTGTTGGAAGCCTTGTTTaGTTACTTCTTAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFVGSLV*LLLNSQ
Trigger: CTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAAC...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTCCCTAGTGAGGAACTaGCACATAACTTCATGTGTC +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIISLVRN*HITSCV
Trigger: GACACATGAAGTTATGTGGCAGTTCCTCACTAGGGA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTACTGACACTCCCTATTaGCCTACTATCACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIITDTPY*PTITKS
Trigger: TGACTTGGTGATAGTAGGGCAATAGGGAGTGTCAGT...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAGTTATTTCCCTTCTTaGGCTGTCAGAGCCGAGACT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLSYFPS*AVRAET
Trigger: AGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGATCCTGGAGGAGGGCTaGAGTGCAATTTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLILEEG*SAISFR
Trigger: CCTGAAGGAAATTGCACTCCAGCCCTCCTCCAGGAT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCATTTAGGCAGGGCTTaGTATTTTCTAATTCACACA +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFHLGRA*YFLIHT
Trigger: TGTGTGAATTAGAAAATACCAAGCCCTGCCTAAATG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCTGACGTCAAGCTGTTaGAGAGCCTTCAACATGTTT +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIILTSSC*RAFNMF
Trigger: AAACATGTTGAAGGCTCTCCAACAGCTTGACGTCAG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTGGCTTGTGCACATTTaGAGCAGTACTAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPWLVHI*SSTSLH
Trigger: ATGGAGACTAGTACTGCTCCAAATGTGCACAAGCCA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp GTGGGACTAGCAAAAACCTACAATGGAAATTCCCATTaGGTAATATACATTCCAGCCCTTCACGTTGTGACA +
Preference number: 4 (lower is better)
Translates to: VGLAKTYNGNSH*VIYIPALHVVT
Trigger: TGTCACAACGTGAAGGGCTGGAATGTATATTACCAAATGGGAATTTCCATTGTAGGTTTTTGCTAGTCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp AGTGGGCTAGGTATACTCTCAGAGGAATGCCTTTATTaGATCAGACAGGTCAGAATCTTCCAGGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: SGLGILSEECLY*IRQVRIFQGKY
Trigger: ATATTTTCCCTGGAAGATTCTGACCTGTCTGATCAAATAAAGGCATTCCTCTGAGAGTATACCTAGCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAGTTACTTTAGGGTCTaGGCTCTTGAACTTCAACCT +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSYFRV*ALELQP
Trigger: AGGTTGAAGTTCAAGAGCTCAGACCCTAAAGTAACT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTATGAACTTCAAGTATaGTGTGAATCTGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIYELQV*CESGVR
Trigger: TCGGACCCCAGATTCACATCATACTTGAAGTTCATA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGGTGTGGTTTTGGAGCTaGGTTGGGAAGAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLVWFWS*VGKRMD
Trigger: ATCCATCCTCTTCCCAACTCAGCTCCAAAACCACAC...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTATGGCCTTTGTCTTATaGGTTTGCTTCATGGTATTT +
Preference number: 4 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLMAFVL*VCFMVF
Trigger: AAATACCATGAAGCAAACGCATAAGACAAAGGCCAT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCCACCTCCACTGTTCATaGCATTATATGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPHLHCS*HYMQST
Trigger: AGTGCTTTGCATATAATGGCATGAACAGTGGAGGTG...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCCTCAAGCTGAGCAGTaGCCAGAATTTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLPQAEQ*PEFMNF
Trigger: GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCACTCCAAGCACTTCTTaGGACTGTCCTGGATTTAAT +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPTPSTS*DCPGFN
Trigger: ATTAAATCCAGGACAGTCCCAAGAAGTGCTTGGAGT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATTCATAAATTGGGATaGTCAGCACACAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSIHKLG*SAHSGK
Trigger: TTTCCCACTGTGTGCTGACCATCCCAATTTATGAAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTCTTCATAAGCACTGCTaGATAAAGGCAATAATAATG +
Preference number: 4 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFLHKHC*IKAIIM
Trigger: CATTATTATTGCCTTTATCCAGCAGTGCTTATGAAG...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAGTTTTATCAGGTACTaGAGACAGCAGGAGTCTATA +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSFIRY*RQQESI
Trigger: TATAGACTCCTGCTGTCTTCAGTACCTGATAAAACT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTAACACCAGAGGCTCATaGAACAATAAAAGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIINTRGS*NNKSQL
Trigger: TAGCTGACTTTTATTGTTTCATGAGCCTCTGGTGTT...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCAAAGCACTGTAGCATaGAAGTCACTTACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLQSTVA*KSLTKL
Trigger: CAGCTTTGTAAGTGACTTTCATGCTACAGTGCTTTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATAATCCATGAGAAATaGATCCTATCTTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSIIHEK*ILSSFQ
Trigger: CTGGAACGAAGATAGGATTCATTTCTCATGGATTAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCGTGCTCAATAATCCATaGGAAATGAATCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSVLNNP*EMNPIF
Trigger: GAAGATAGGATTCATTTCTCATGGATTATTGAGCAC...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGGATTACATTTCAACATaGGATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLDYIST*DLGGDT
Trigger: TGTGTCCCCACCCAAATCTCATGTTGAAATGTAATC...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACATTTGCTCTGCAAGTCTaGCATTTGACAATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTFALQV*HLTMGQ
Trigger: CTGGCCCATTGTCAAATGGCAGACTTGCAGAGCAAA...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTCGTTCTGCTGTTTCTaGTATGTTCTCAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSFCCF*YVLSSK
Trigger: TTTGGAACTGAGAACATACCAGAAACAGCAGAACGA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACCCATTCATGCAGTGTaGCCTGTCACTGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTPIHAV*PVTVER
Trigger: TCTTTCTACAGTGACAGGCCACACTGCATGAATGGG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTTCATTGTCCCAGAAATaGCAAAAGACAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIISLSQK*QKTDHS
Trigger: AGAATGGTCTGTCTTTTGCCATTTCTGGGACAATGA...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACTCATGGTTTCCAGATaGAAAGGCCGGAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTLMVSR*KGRKNR
Trigger: CCTATTCTTCCGGCCTTTCCATCTGGAAACCATGAG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAGTGAGCACTTTACATaGCCAGAGCAGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLSEHFT*PEQKEG
Trigger: ACCTTCCTTCTGCTCTGGCCATGTAAAGTGCTCACT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp CAAACGTGTAATTCCCTTGAAAGATTCAGTGTTCCCTaGTTTAATGTAAAGGGTGGAAGGGGAAGATTCCTA +
Preference number: 4 (lower is better)
Translates to: QTCNSLERFSVP*FNVKGGRGRFL
Trigger: TAGGAATCTTCCCCTTCCACCCTTTACATTAAACAAGGGAACACTGAATCTTTCAAGGGAATTACACGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp CCTATTGCCCTACTATCACCAAGTCAAAGAGCAATCTaGTTCCTCTATCATAGTTCTTCCTACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PIALLSPSQRAI*FLYHSSSYLEA
Trigger: AGCTTCTAAGTAGGAAGAACTATGATAGAGGAACAAGATTGCTCTTTGACTTGGTGATAGTAGGGCAATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAGATTCACTGGACTTTaGATTGCCACATCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTRFTGL*IATSSQ
Trigger: CTGTGAGGATGTGGCAATTCAAAGTCCAGTGAATCT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAACACTCAACTTGCGCTaGGGTCCAGTTTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQETLNLR*GPVSFY
Trigger: ATAAAAAGAAACTGGACCTCAGCGCAAGTTGAGTGT...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTAAGCAATTCTTTGATTaGTGGCTCCAACATGGATTA +
Preference number: 4 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIKQFFD*WLQHGL
Trigger: TAATCCATGTTGGAGCCATCAATCAAAGAATTGCTT...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAATTTCCCAAACATCTaGAATCTGAGAATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPNFPNI*NLRICA
Trigger: GGCACAAATTCTCAGATTTCAGATGTTTGGGAAATT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTTATTGATTTCCAAATaGACAGGGGCACCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLLLISK*TGAPSP
Trigger: CGGACTTGGTGCCCCTGTGCATTTGGAAATCAATAA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCAAACCAGCTTGGAATTaGTTCATTTACAACTCATTC +
Preference number: 4 (lower is better)
Translates to: FITLESWHLHCSCHYMQSKPAWN*FIYNSF
Trigger: GAATGAGTTGTAAATGAAGCAATTCCAAGCTGGTTT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTACCACTTAAACATATaGAATGGCAGATGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLYHLNI*NGRCPG
Trigger: ACCGGGGCATCTGCCATTGCATATGTTTAAGTGGTA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGACTCAGTGTCAGAGCTaGCTGACTTTCAGGATTCTA +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLTQCQS*LTFRIL
Trigger: TAGAATCCTGAAAGTCAGCCAGCTCTGACACTGAGT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGATCACATTGGAAAGTTaGCACCTCCACTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLITLES*HLHCSC
Trigger: GCATGAACAGTGGAGGTGCCAACTTTCCAATGTGAT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCACAAGCTGTCACGCTaGTATTATATCTACATAACG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLHKLSR*YYIYIT
Trigger: CGTTATGTAGATATAATACCAGCGTGACAGCTTGTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGAGTACCTCTGGATATaGGCATTATCAAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEEYLWI*ALSRCQ
Trigger: CTGACATCTTGATAATGCCCATATCCAGAGGTACTC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp AGAAATACAAGTGAGAACCTGTTATTACAGGTTAAATaGTGTAACACTCAACTTGCGCTGAGGTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RNTSENLLLQVK*CNTQLALRSSF
Trigger: GAAACTGGACCTCAGCGCAAGTTGAGTGTTACACAATTTAACCTGTAATAACAGGTTCTCACTTGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGAATCAAGAACTGCCTaGGTCTTATGGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTESRTA*VLWFLE
Trigger: TTCCAGAAACCATAAGACTCAGGCAGTTCTTGATTC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTTACTCTTGAAGAATaGCCCAAGCTGAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELTLEE*PKLRNF
Trigger: GAAATTTCTCAGCTTGGGTCATTCTTCAAGAGTAAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAGGGCTTCATAAGCACTaGTGGATAAAGGCAATAATA +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEGLHKH*WIKAII
Trigger: TATTATTGCCTTTATCCAGCAGTGCTTATGAAGCCC...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACATTTCTTAATTGCTCCTaGTGGATCAAAGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTFLNCS*WIKGAL
Trigger: AAGAGCCCCTTTGATCCACCAGGAGCAATTAAGAAA...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTCAGAACACATGGAATaGGAACAATTCTCCCCATAC +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLSEHME*EQFSPY
Trigger: GTATGGGGAGAATTGTTCCCATTCCATGTGTTCTGA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAAAGAAGATTCATAAATTaGGATGGTCAGCACACAGTG +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQERRFIN*DGQHTV
Trigger: CACTGTGTGCTGACCATCCCAATTTATGAATCTTCT...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCCTCCAAACACATTGTaGTTTGTTAAAACACTGAAG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLPPNTL*FVKTLK
Trigger: CTTCAGTGTTTTAACAAACCACAATGTGTTTGGAGG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAATTTTATTGTTATCAGTaGTTTGTCATCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEFYCYQ*FVILPT
Trigger: GGTGGGGAGGATGACAAACCACTGATAACAATAAAA...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAACACTAGGGTCAAGTaGTTCACAATGTTAACAGTT +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLNTRVK*FTMLTV
Trigger: AACTGTTAACATTGTGAACCACTTGACCCTAGTGTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp TCAATGCAACCTCTGGTCCTTCAAACCAGCTTGGAATaGCTTCATTTACAACTCATTCTATGTTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SMQPLVLQTSLE*LHLQLILCFHQ
Trigger: TTGATGAAAACATAGAATGAGTTGTAAATGAAGCAATTCCAAGCTGGTTTGAAGGACCAGAGGTTGCATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAATCAGCAATCACTTTCTaGACTTTCTTAAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQESAITF*TFLNSC
Trigger: GCAGGAATTTAAGAAAGTTCAGAAAGTGATTGCTGA...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACAAATGGGATGCAGCTaGTTTAGACCATCTCTATAT +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTQMGCS*FRPSLY
Trigger: ATATAGAGATGGTCTAAATCAGCTGCATCCCATTTG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACATTCAGAAGTGAATCATaGTTTAATCCCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTFRSES*FNPLCC
Trigger: ACAGCAGAGGGGATTAAATCATGATTCACTTCTGAA...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAATGGGAAATTGGCTTaGGTGTTGAGAAATACCCAT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLNGKLA*VLRNTH
Trigger: ATGGGTATTTCTCAACACTCAAGCCAATTTCCCATT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGTCATTGTCAAACCACTaGTTTAGATTTTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLSLSNH*FRFCVQ
Trigger: CTGAACACAAAATCTAAACCAGTGGTTTGACAATGA...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTTAATTTGATCTCCTaGCCTGGGACATATAAATGT +
Preference number: 4 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELNLIS*PGTYKC
Trigger: ACATTTATATGTCCCAGGCCAGGAGATCAAATTAAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCATAAACACTCCAGATaGATTTTCTCATTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLHKHSR*IFSLSQ
Trigger: CTGGGACAATGAGAAAATCCATCTGGAGTGTTTATG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR TCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGTACTTACCGTTGATATaGAAAAGTACATGGGGATGT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLYLPLI*KSTWGC
Trigger: ACATCCCCATGTACTTTTTCATATCAACGGTAAGTA...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAATTTGGCCCTACCTTaGTCTCATTTATTTCATGCT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLNLALP*SHLFHA
Trigger: AGCATGAAATAAATGAGAGCAAGGTAGGGCCAAATT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAAGATAGCCAGAAATTaGTATGAGTATCCGACTGAT +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLKIARN*YEYPTD
Trigger: ATCAGTCGGATACTCATAGCAATTTCTGGCTATCTT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACATCCCTCACTGTACATTaGATTTTACAGGCTATACAA +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTSLTVH*ILQAIQ
Trigger: TTGTATAGCCTGTAAAATGCAATGTACAGTGAGGGA...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR GCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAATACTCTCAGAGGAATaGCTTTATTTGATCAGACAG +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTILSEE*LYLIRQ
Trigger: CTGTCTGATCAAATAAAGGCATTCCTCTGAGAGTAT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGATAAACATCTTCATTTaGTCCCGAGTTACTTTAGGG +
Preference number: 4 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLINIFI*SRVTLG
Trigger: CCCTAAAGTAACTCGGGACCAAATGAAGATGTTTAT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp ACCATAAAGGTAGAGGAGAGTGAACACATAACCCACTaGCAAATAAGAATTACCTTGCAAGATTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: TIKVEESEHITH*QIRITLQDSYF
Trigger: AAAATAGGAATCTTGCAAGGTAATTCTTATTTGCAAGTGGGTTATGTGTTCACTCTCCTCTACCTTTATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp AGGAACAATTTTTCTGTTATCACTGTCCTTTTTACTTaGCTAAGATCTTACCGTGTTAGAGGTGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RNNFSVITVLFT*LRSYRVRGGRE
Trigger: TTCTCTTCCACCTCTAACACGGTAAGATCTTAGCAAAGTAAAAAGGACAGTGATAACAGAAAAATTGTTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299413.7
3UTR CAA 72 bp CTTATGCGTTTGCTTCATGGTATTTATTTCAATTGGTaGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LMRLLHGIYFNW*EALFAYFLILS
Trigger: ACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAATAAATACCATGAAGCAAACGCATAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CCA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAGGTATTTATTTCAATTaGTTGGAAGCCTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTGIYFN*LEALFA
Trigger: AGCAAACAAGGCTTCCAACCAATTGAAATAAATACC...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp GACCGCGCCGCGTCTCGAAGCGGGACCTGGGGCCGCGGCAGCCCCTaGCCGGGCGCAGCAGCAAAGACCCTTTCCGCCGGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: DRAASRSGTWGRGSP*PGAAAKTLSAGSAC
Trigger: GCAGGCCGAGCCGGCGGAAAGGGTCTTTGCTGCTGCGCCCGGGCAGGGGCTGCCGCGGCCCCAGGTCCCGCTTCGAGACGCGGCGCGGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS CCA 90 bp TCCTCCTCCCGCCCCGGGTCCCTTCCTAGGGAGTCGCCTCCCGCCTaGACCGCGCCGCGTCTCGAAGCGGGACCTGGGGCCGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSSRPGSLPRESPPA*TAPRLEAGPGAAAA
Trigger: GGCTGCCGCGGCCCCAGGTCCCGCTTCGAGACGCGGCGCGGTCCAGGCGGGAGGCGACTCCCTAGGAAGGGACCCGGGGCGGGAGGAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp CTTTCCGCCGGCTCGGCCTGCTCCGCTCTGTCCCTGCGCTTCCTCTaGCGCGCAAGGCACTTCCGGCGCGGCCACCCGGCGCCCCCGTCG +
Preference number: 5 (lower is better)
Translates to: LSAGSACSALSLRFL*RARHFRRGHPAPPS
Trigger: CGACGGGGGCGCCGGGTGGCCGCGCCGGAAGTGCCTTGCGCGGCAGAGGAAGCGCAGGGACAGAGCGGAGCAGGCCGAGCCGGCGGAAAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp CCCTGCCCGGGCGCAGCAGCAAAGACCCTTTCCGCCGGCTCGGCCTaGTCCGCTCTGTCCCTGCGCTTCCTCTGCCGCGCAAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: PCPGAAAKTLSAGSA*SALSLRFLCRARHF
Trigger: GAAGTGCCTTGCGCGGCAGAGGAAGCGCAGGGACAGAGCGGAGCAGGCCGAGCCGGCGGAAAGGGTCTTTGCTGCTGCGCCCGGGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp CTTCCTCGGCCCCCGGAGCCTCGTCGGGCTCGCACTCGTCACACGTaGCGTCGTGAGGCAGTTCCTCGAAGGCCGCGCCCACTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPRPPEPRRARTRHT*RREAVPRRPRPLQR
Trigger: CCTCTGGAGTGGGCGCGGCCTTCGAGGAACTGCCTCACGACGGCACGTGTGACGAGTGCGAGCCCGACGAGGCTCCGGGGGCCGAGGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 90 bp GGCGGGGTCCAGGCCTGGGAGCCGTGGACGTATTCGGCCAGATGGTaGCTGAGGAACTTCTGCCTGTGCGCCTCGGCATGGCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GGVQAWEPWTYSARW*LRNFCLCASAWRRQ
Trigger: CTGCCGCCGCCATGCCGAGGCGCACAGGCAGAAGTTCCTCAGTCACCATCTGGCCGAATACGTCCACGGCTCCCAGGCCTGGACCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 90 bp GGGTCCAGGCCTGGGAGCCGTGGACGTATTCGGCCAGATGGTGACTaGGGAACTTCTGCCTGTGCGCCTCGGCATGGCGGCGGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: GSRPGSRGRIRPDGD*GTSACAPRHGGGSS
Trigger: GCTACTGCCGCCGCCATGCCGAGGCGCACAGGCAGAAGTTCCTCAGTCACCATCTGGCCGAATACGTCCACGGCTCCCAGGCCTGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAAGGGGCTCTTTTCCTaGACCTACCACAACCAGGGG +
Preference number: 5 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEKGLFS*TYHNQG
Trigger: CCCCTGGTTGTGGTAGGTCAAGGAAAAGAGCCCCTT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTACCTTGCAGGGTCCTTaGTGCACAACTCTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREATLQGP*CTTLRD
Trigger: GTCTCTCAGAGTTGTGCACAAAGGACCCTGCAAGGT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 90 bp GGCACCACTGGGTCCTTCCTCATCGCCCTCTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAGTTGTTCCTTGGCTTGGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: GTTGSFLIALCLWLS*FIRGIKLFLGLGHL
Trigger: CAGATGGCCCAAGCCAAGGAACAACTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCAGAGGGCGATGAGGAAGGACCCAGTGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGAGGATTCCCCTTCTTCTaGGTTGTCTTCTTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGGFPFF*VVFFGL
Trigger: GAGGCCGAAGAAGACAACCAAGAAGAAGGGGAATCC...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTAAGTTGTTCCTTGGCTaGGGCCATCTGAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREAKLFLG*GHLSHQ
Trigger: TTGATGACTCAGATGGCCCAAGCCAAGGAACAACTT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTACAGTCATGCAGTGTaGAAAGCAGTGCATCATGGG +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREAYSHAV*KAVHHG
Trigger: CCCATGATGCACTGCTTTCAACACTGCATGACTGTA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGGGTATGGAAAAATCCTaGCCTGGGTACCAAATGGGA +
Preference number: 5 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEGMEKS*PGYQMG
Trigger: TCCCATTTGGTACCCAGGCAAGGATTTTTCCATACC...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAGGACAATGGATTCATaGGTTCTCCCCATTCATGCA +
Preference number: 5 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLERTMDS*VLPIHA
Trigger: TGCATGAATGGGGAGAACCAATGAATCCATTGTCCT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTTAAGTCTGTTCTTTaGCCACTTCCCAGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLKSVL*PLPRAL
Trigger: GAGAGCTCTGGGAAGTGGCAAAAGAACAGACTTAAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATCCAGGGTGTGGGAGATGATCTGAAGGTCTATGGGTGGGGAGTGCCACAGGAAAAAAGGCAAACTCCTTaGCCCCAAGGCCATACTGTA +
Preference number: 5 (lower is better)
Translates to: IQGVGDDLKVYGWGVPQEKRQTP*PQGHTV
Trigger: TACAGTATGGCCTTGGGGCAAAGGAGTTTGCCTTTT...TTCCTGTGGCACTCCCCACCCATAGACCTTCAGATCATCTCCCACACCCTGGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGGTGGTGCCACCTGCTTaGGACACTCATTCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWVVPPA*DTHSGV
Trigger: TACCCCAGAATGAGTGTCCAAAGCAGGTGGCACCAC...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTACCATATCACATGGCTaGTGCACATTTGGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREATISHG*CTFGAV
Trigger: TACTGCTCCAAATGTGCACAAGCCATGTGATATGGT...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACAAGTTATTTCCCTTCTTGGGCTGTCAGAGCCGAGACTCCAAGCACTTCTTGGCATGAGCTGTGGCCATaGCCTCTTGGATGTCCACTA +
Preference number: 5 (lower is better)
Translates to: TSYFPSWAVRAETPSTSWHELWP*PLGCPL
Trigger: TAGTGGACATCCAAGAGGCAATGGCCACAGCTCATG...CCAAGAAGTGCTTGGAGTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTTAGCTCTCAAATATaGTGTGTGTGTGTGCGGACA +
Preference number: 5 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLSSQI*CVCVRT
Trigger: TGTCCGCACACACACACACAATATTTGAGAGCTAAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTATTACGACTTTCTGTaGGGTGTCTCTAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREAYYDFL*GVSNSG
Trigger: ACCAGAGTTAGAGACACCCAACAGAAAGTCGTAATA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp TTGGGCCATCTGAGTCATCAACCTATCCATGTGGGATTGGATGTCTaGCAGTATCTCAGTCACATGAGCTGTGGCCATTGCCTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: LGHLSHQPIHVGLDV*QYLSHMSCGHCLLD
Trigger: ATCCAAGAGGCAATGGCCACAGCTCATGTGACTGAGATACTGGCAGACATCCAATCCCACATGGATAGGTTGATGACTCAGATGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCCTGGTGGAAGTACGTTaGTTGCTGAGCAGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFLVEVR*LLSSFH
Trigger: GTGAAAGCTGCTCAGCAACAAACGTACTTCCACCAG...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAAACGTGTAATTCCCTaGAAAGATTCAGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLEKRVIP*KDSVFP
Trigger: AGGGAACACTGAATCTTTCAAGGGAATTACACGTTT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACTAGATGTATGGCCTTaGTCTTATGCGTTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGLDVWP*SYAFAS
Trigger: TGAAGCAAACGCATAAGACAAAGGCCATACATCTAG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATCAAATGCCACACAACTaGTCAGTGGCAGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: SEATNGHPQAREPYLDSNQMPHN*SVAEQG
Trigger: TCCCTGCTCTGCCACTGACAAGTTGTGTGGCATTTG...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGGTGGAAGTACGTTTGTaGCTGAGCAGCTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQVEVRL*LSSFHR
Trigger: TCTGTGAAAGCTGCTCAGCAACAAACGTACTTCCAC...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGAAAACTGGTCATCCCTaGGAGAGATATGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQKTGHP*ERYVPA
Trigger: AGCAGGCACATATCTCTCCAAGGGATGACCAGTTTT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CAGAGAGTCTGCTGTCCTGGGCTTTACCAGCCTGGCTTGTTGGGTGACCTTGAGAATGGAAATTCCCATTaGGTAATATACATTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QRVCCPGLYQPGLLGDLENGNSH*VIYIPA
Trigger: GGCTGGAATGTATATTACCAAATGGGAATTTCCATT...CTCAAGGTCACCCAACAAGCCAGGCTGGTAAAGCCCAGGACAGCAGACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TGCAGGCTGCACAGCAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCTTTTCCATTTTCTCTATaGCTGTCCTCCTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: CRLHSKHDAGICSASREAFPFSL*LSSFFL
Trigger: AAGGAAAAAGGAGGACAGCAATAGAGAAAATGGAAA...AGCCTCCCTAGAAGCTGAGCAGATGCCAGCATCATGCTTGCTGTGCAGCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 90 bp CAAATCAAGCCCATGGTCCGGACACTTCCTCTTGGCCACTCTCTCTaGTTCCATTTCTATTTCTGGGTCAAATTCACTTTCTGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: QIKPMVRTLPLGHSL*FHFYFWVKFTFCLS
Trigger: ACTGAGGCAGAAAGTGAATTTGACCCAGAAATAGAAATGGAAGCAGAGAGAGTGGCCAAGAGGAAGTGTCCGGACCATGGGCTTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GGTCTATGGGTGGGGAGTGCCACAGGAAGAAGGGTTCTGGTCGGAGTTAAAGGACAAAGTTCTATATCTTaGAAGGCCAAGAAACACCTT +
Preference number: 5 (lower is better)
Translates to: GLWVGSATGRRVLVGVKGQSSIS*KAKKHL
Trigger: AAGGTGTTTCTTGGCCTTCAAAGATATAGAACTTTG...TCCTTTAACTCCGACCAGAACCCTTCTTCCTGTGGCACTCCCCACCCATAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTCACTGGACTTTGAATaGCCACATCCTCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQSLDFE*PHPHRV
Trigger: TACTCTGTGAGGATGTGGCAATTCAAAGTCCAGTGA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGGAAATGGGGCCATGTaGGACCAAACAAAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFGNGAM*DQTKSN
Trigger: ATTACTCTTTGTTTGGTCCAACATGGCCCCATTTCC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATAAACAAGCCCATGACTaGGCTATTCAGAGGGGCATA +
Preference number: 5 (lower is better)
Translates to: SEATNGHPQAREPYLDSNKQAHD*AIQRGI
Trigger: TATGCCCCTCTGAATAGCCAAGTCATGGGCTTGTTT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGGCCAGGTCCCTTATTaGCTCTGCAAGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLGQVPY*LCKSAI
Trigger: AATGGCAGACTTGCAGAGCAAATAAGGGACCTGGCC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 90 bp GCTGATTCATTAGAGGTATCAAGTTGTTCCTTGGCTTGGGCCATCTaGGTCATCAACCTATCCATGTGGGATTGGATGTCTGCCAGTATC +
Preference number: 5 (lower is better)
Translates to: ADSLEVSSCSLAWAI*VINLSMWDWMSASI
Trigger: GATACTGGCAGACATCCAATCCCACATGGATAGGTTGATGACTCAGATGGCCCAAGCCAAGGAACAACTTGATACCTCTAATGAATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGCTTGTTGGGTGACCTaGAGTGACTTATCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLACWVT*SDLSPS
Trigger: AGAGGGAGATAAGTCACTCAAGGTCACCCAACAAGC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGAGGAATGCCTTTATTaGATCAGACAGGTCAGAATC +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFEECLY*IRQVRI
Trigger: GATTCTGACCTGTCTGATCAAATAAAGGCATTCCTC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTTTAGGGTCTGAGCTCTaGAACTTCAACCTTTCCACC +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLLGSEL*NFNLST
Trigger: GGTGGAAAGGTTGAAGTTCAAGAGCTCAGACCCTAA...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATGAGAATATTTTCTACTaGGGGAGAGAGGACTTCCTA +
Preference number: 5 (lower is better)
Translates to: SEATNGHPQAREPYLDSNENIFY*GREDFL
Trigger: TAGGAAGTCCTCTCTCCCCAAGTAGAAAATATTCTC...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCTTCCCTCACTGTACATaGCATTTTACAGGCTATACA +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFFPHCT*HFTGYT
Trigger: TGTATAGCCTGTAAAATGCAATGTACAGTGAGGGAA...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTCCATATATCAGGGCTTaGGAGCTTTGCAGTCTACTC +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLPYIRA*ELCSLL
Trigger: GAGTAGACTGCAAAGCTCCAAAGCCCTGATATATGG...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTATTGTTATCAGTGGTTaGTCATCCTCCCCACCTGAA +
Preference number: 5 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFIVISG*SSSPPE
Trigger: TTCAGGTGGGGAGGATGACAAACCACTGATAACAAT...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCGGTTTTGGAGCTGAGTaGGGAAGAGGATGGATACGC +
Preference number: 5 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPGFGAE*GRGWIR
Trigger: GCGTATCCATCCTCTTCCCAACTCAGCTCCAAAACC...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTCCTATCCATGTGGGATaGGATGTCTGCCAGTATCTC +
Preference number: 5 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIPIHVG*DVCQYL
Trigger: GAGATACTGGCAGACATCCAATCCCACATGGATAGG...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TCAGGAGCAAGCTTGTCCCATTTTCCAAAGACAGAAGACGGCACATTGCTCTTTTCGGGAGCACAAAGCTaGGTTGTAAGAAATTGTGAT +
Preference number: 5 (lower is better)
Translates to: SGASLSHFPKTEDGTLLFSGAQS*VVRNCD
Trigger: ATCACAATTTCTTACAACCAAGCTTTGTGCTCCCGA...AAAGAGCAATGTGCCGTCTTCTGTCTTTGGAAAATGGGACAAGCTTGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCGAACACATAACCCACTaGCAAATAAGAATTACCTTG +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFEHITH*QIRITL
Trigger: CAAGGTAATTCTTATTTGCAAGTGGGTTATGTGTTC...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCAAGTTATTTCCCTTCTaGGGCTGTCAGAGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPKLFPF*GCQSRD
Trigger: GTCTCGGCTCTGACAGCCCAAGAAGGGAAATAACTT...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGTTCAGGGCTGTCACTTaGACTCAGTGCCTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLFRAVT*TQCLRS
Trigger: GCTCCTAAGGCACTGAGTCAAAGTGACAGCCCTGAA...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTGAGGCAACAAATGGCCACCCTCAAGCCAGAGAACCATACTTGGACTCAAATAGATTCAGTGTTCCCTaGTTTAATGTAAAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SEATNGHPQAREPYLDSNRFSVP*FNVKGG
Trigger: TCCACCCTTTACATTAAACAAGGGAACACTGAATCT...ATTTGAGTCCAAGTATGGTTCTCTGGCTTGAGGGTGGCCATTTGTTGCCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGTCCAGTAATAGTTTATaGATTTCCAAATGCACAGGG +
Preference number: 5 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQSSNSL*ISKCTG
Trigger: CCCTGTGCATTTGGAAATCAATAAACTATTACTGGA...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AAGGAGCAATGCCTGCCTCCTCAAGCTGAGCAGTGCCCAGAATTTATGAACTTCAAACCTCCAAACACATaGTGGTTTGTTAAAACACTG +
Preference number: 5 (lower is better)
Translates to: KEQCLPPQAEQCPEFMNFKPPNT*WFVKTL
Trigger: CAGTGTTTTAACAAACCACAATGTGTTTGGAGGTTT...GAAGTTCATAAATTCTGGGCACTGCTCAGCTTGAGGAGGCAGGCATTGCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp GTACACACTCCCCCGACACACACACTAAAACCAGGAATCAGTAAGAGAGTCCAGACTGTCCTTTTTACTTaGCTAAGATCTTACCGTGTT +
Preference number: 5 (lower is better)
Translates to: VHTPPTHTLKPGISKRVQTVLFT*LRSYRV
Trigger: AACACGGTAAGATCTTAGCAAAGTAAAAAGGACAGT...CTGGACTCTCTTACTGATTCCTGGTTTTAGTGTGTGTGTCGGGGGAGTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATTAGAGGTATCAAGTaGTTCCTTGGCTTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: FITLESWHLHCSCHYMQSIRGIK*FLGLGH
Trigger: ATGGCCCAAGCCAAGGAACAACTTGATACCTCTAAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCATCCTAGTTCTTACATaGATAAATGCTGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: FITLESWHLHCSCHYMQSILVLT*INAAGR
Trigger: CCTGCCGGCAGCATTTATCAATGTAAGAACTAGGAT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCTTCAGGCCAGAAGATTaGACTGCTACCCTTAGACTT +
Preference number: 5 (lower is better)
Translates to: FITLESWHLHCSCHYMQSFRPED*TATLRL
Trigger: AAGTCTAAGGGTAGCAGTCAAATCTTCTGGCCTGAA...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCATCACATTGGAAAGTTGGCACCTCCACTGTTCATGCCATTATATGCAAAGCACAGTCAAGTATAATTaGGCCACAAGTGGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: FITLESWHLHCSCHYMQSTVKYN*ATSGLG
Trigger: ACCTAGCCCACTTGTGGCCAAATTATACTTGACTGT...GCTTTGCATATAATGGCATGAACAGTGGAGGTGCCAACTTTCCAATGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAAAAGAAGGTGCCTTTaGGTGGTGCCACCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLKRRCL*VVPPAL
Trigger: CAAAGCAGGTGGCACCACCAAAAGGCACCTTCTTTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTCCACAAGAGTTAATTaGGCCCTACCTTGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPSTRVN*ALPCSH
Trigger: ATGAGAGCAAGGTAGGGCCAAATTAACTCTTGTGGA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTGTCCTTCAAACCAGCTaGGAATTGCTTCATTTACAA +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLVLQTS*ELLHLQ
Trigger: TTGTAAATGAAGCAATTCCAAGCTGGTTTGAAGGAC...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTTGGTTTTGCCTCTCGTaGATTTTCTTATTTATGGCC +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLWFCLS*IFLFMA
Trigger: GGCCATAAATAAGAAAATCAACGAGAGGCAAAACCA...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAAATGGGAAATTGGCTaGAGTGTTGAGAAATACCCA +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLKWEIG*SVEKYP
Trigger: TGGGTATTTCTCAACACTCAAGCCAATTTCCCATTT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGCAACCCAGAGTCTGCTaGGATATGGTTCTAGTTGTA +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLQPRVC*DMVLVV
Trigger: TACAACTAGAACCATATCCAAGCAGACTCTGGGTTG...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCGCATTTAGGCAGGGCTaGGTATTTTCTAATTCACAC +
Preference number: 5 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPAFRQG*VFSNSH
Trigger: GTGTGAATTAGAAAATACCAAGCCCTGCCTAAATGC...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTGTAGGGGGATCAGTGTaGTTATTCACCAATACAAGA +
Preference number: 5 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIVGGSV*LFTNTR
Trigger: TCTTGTATTGGTGAATAACAACACTGATCCCCCTAC...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGCCTGACGTCAAGCTGTaGGAGAGCCTTCAACATGTT +
Preference number: 5 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLPDVKL*ESLQHV
Trigger: AACATGTTGAAGGCTCTCCAACAGCTTGACGTCAGG...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp AGTTCTCCCTTCCAAAAGTACAGTTTCAGGCCAGAAGATTTGACTGCTACCCTTAGTCAAAGAGCAATCTaGTTCCTCTATCATAGTTCT +
Preference number: 5 (lower is better)
Translates to: SSPFQKYSFRPEDLTATLSQRAI*FLYHSS
Trigger: AGAACTATGATAGAGGAACAAGATTGCTCTTTGACT...AAGGGTAGCAGTCAAATCTTCTGGCCTGAAACTGTACTTTTGGAAGGGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAGTTCAAAGCAGCCATaGAGGGATTACCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTSSKQP*RDYLKD
Trigger: GTCCTTCAGGTAATCCCTCAATGGCTGCTTTGAACT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACAGATTCACTGGACTTaGAATTGCCACATCCTCACA +
Preference number: 5 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQEQIHWT*NCHILT
Trigger: TGTGAGGATGTGGCAATTCAAAGTCCAGTGAATCTG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGACAGTATCTACCATCTaGAGTCTTCACATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLTVSTI*SLHIWL
Trigger: GAGCCAAATGTGAAGACTCAAGATGGTAGATACTGT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACATCACATTGGAAAGTaGGCACCTCCACTGTTCATG +
Preference number: 5 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTHHIGK*APPLFM
Trigger: CATGAACAGTGGAGGTGCCAACTTTCCAATGTGATG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTATGAACTTCAAGTATGATGTGAATCTGGGGTCCGAGCCAGGCATTATCATTGCCAGAGAACCATACTaGGACTCAAATGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: FMNFKYDVNLGSEPGIIIAREPY*DSNVFK
Trigger: CTTAAAAACATTTGAGTCCAAGTATGGTTCTCTGGC...AATGATAATGCCTGGCTCGGACCCCAGATTCACATCATACTTGAAGTTCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTCTGTCTCAGTTACTCATTGTCAAACCACTGGTTTAGATTTTGTGTTCAGGAACTGAAATCTGAGAATTaGTGCCTGGAATCCATGAGG +
Preference number: 5 (lower is better)
Translates to: FCLSYSLSNHWFRFCVQELKSEN*CLESMR
Trigger: CCTCATGGATTCCAGGCACAAATTCTCAGATTTCAG...TTCCTGAACACAAAATCTAAACCAGTGGTTTGACAATGAGTAACTGAGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAAGAAGATTCATAAATaGGGATGGTCAGCACACAGT +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLKKIHK*GWSAHS
Trigger: ACTGTGTGCTGACCATCCCAATTTATGAATCTTCTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGACAGATAAGCTCCTTTaGCTGTTGTCCCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLTDKLL*LLSLSK
Trigger: CTTGGAAAGGGACAACAGCAAAAGGAGCTTATCTGT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ACTCACTATCATGACAACAAAGGGCGGATGTTGTTAAATCATGAGAAAACTCCCTGGTATTTATTTCAATaGGTTGGAAGCCTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: THYHDNKGRMLLNHEKTPWYLFQ*VGSLVC
Trigger: GCAAACAAGGCTTCCAACCAATTGAAATAAATACCA...GGGAGTTTTCTCATGATTTAACAACATCCGCCCTTTGTTGTCATGATAGTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGAGCCAGGCATTATCATaGGGAAGTGGTGGACAATTT +
Preference number: 5 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLSQALS*GSGGQF
Trigger: AAATTGTCCACCACTTCCCAATGATAATGCCTGGCT...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp TTTCAATTGGTTGGAAGCCTTGTTTGCTTACTTCTTAATTCTCAGTCACTTTTGGTATCAGGAGCAAGCTaGTCCCATTTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: FQLVGSLVCLLLNSQSLLVSGAS*SHFPKT
Trigger: TGTCTTTGGAAAATGGGACAAGCTTGCTCCTGATAC...CAAAAGTGACTGAGAATTAAGAAGTAAGCAAACAAGGCTTCCAACCAATTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAAAGAAGACATGGTTTaGCCTCTCGTTGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLKEDMV*PLVDFL
Trigger: AAGAAAATCAACGAGAGGCAAAACCATGTCTTCTTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp ATAGCCAGAAATTGCTATGAGTATCCGACTGATTCTGGAAACATTCATTACCTGAACAAAGGGCGGATGTaGTTAAATCATGAGAAAACT +
Preference number: 5 (lower is better)
Translates to: IARNCYEYPTDSGNIHYLNKGRM*LNHEKT
Trigger: AGTTTTCTCATGATTTAACAACATCCGCCCTTTGTT...CAGGTAATGAATGTTTCCAGAATCAGTCGGATACTCATAGCAATTTCTGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACAAGTCCACCTGAGTCTTaGCTTCTTAATTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTSPPES*LLNSSK
Trigger: CTTTGAAGAATTAAGAAGCAAAGACTCAGGTGGACT...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS-3UTR CAA 90 bp CCTCATAATAGAGGTAAGAGAAAGAGATTAACAGGAAAGCTTGTTTTGAGTACACATTTTCAAATAAAGTaGAGTAGAGAGCAGAACACC +
Preference number: 5 (lower is better)
Translates to: PHNRGKRKRLTGKLVLSTHFQIK*SREQNT
Trigger: GGTGTTCTGCTCTCTACTCAACTTTATTTGAAAATG...TGTACTCAAAACAAGCTTTCCTGTTAATCTCTTTCTCTTACCTCTATTATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS CCA 72 bp CGCCCCGGGTCCCTTCCTAGGGAGTCGCCTCCCGCCTaGACCGCGCCGCGTCTCGAAGCGGGACCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RPGSLPRESPPA*TAPRLEAGPGA
Trigger: GGCCCCAGGTCCCGCTTCGAGACGCGGCGCGGTCCAGGCGGGAGGCGACTCCCTAGGAAGGGACCCGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS GCA 72 bp CCCCCGGAGCCTCGTCGGGCTCGCACTCGTCACACGTaGCGTCGTGAGGCAGTTCCTCGAAGGCCGCGCCCA +
Preference number: 6 (lower is better)
Translates to: PPEPRRARTRHT*RREAVPRRPRP
Trigger: TGGGCGCGGCCTTCGAGGAACTGCCTCACGACGGCACGTGTGACGAGTGCGAGCCCGACGAGGCTCCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 72 bp CCTGGGAGCCGTGGACGTATTCGGCCAGATGGTGACTaGGGAACTTCTGCCTGTGCGCCTCGGCATGGCGGC +
Preference number: 6 (lower is better)
Translates to: PGSRGRIRPDGD*GTSACAPRHGG
Trigger: GCCGCCATGCCGAGGCGCACAGGCAGAAGTTCCTCAGTCACCATCTGGCCGAATACGTCCACGGCTCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 72 bp CAGGCCTGGGAGCCGTGGACGTATTCGGCCAGATGGTaGCTGAGGAACTTCTGCCTGTGCGCCTCGGCATGG +
Preference number: 6 (lower is better)
Translates to: QAWEPWTYSARW*LRNFCLCASAW
Trigger: CCATGCCGAGGCGCACAGGCAGAAGTTCCTCAGTCACCATCTGGCCGAATACGTCCACGGCTCCCAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS CCA 72 bp GGTGGAGAGTTGGTGGCCCTGGTGAGCCCCAATGACTaGACACAGGACACAGATGAGCTGCCTATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: GGELVALVSPND*TQDTDELPIFL
Trigger: CAGGAAGATAGGCAGCTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCACCAGGGCCACCAACTCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS CAA 90 bp CTCGGATTCCCCTTCTTCTTGGTTGTCTTCTTCGGCCTCGCTTTCTaGCTCATCCTCCATTTCTTCCTCGCTGTCTTCTTCACTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LGFPFFLVVFFGLAF*LILHFFLAVFFTLL
Trigger: GAGGAGAGTGAAGAAGACAGCGAGGAAGAAATGGAGGATGAGCAAGAAAGCGAGGCCGAAGAAGACAACCAAGAAGAAGGGGAATCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299413.7
CDS TCA 72 bp GGGTCCTTCCTCATCGCCCTCTGCCTTTGGCTCAGCTaGTTCATTAGAGGTATCAAGTTGTTCCTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: GSFLIALCLWLS*FIRGIKLFLGL
Trigger: CAAGCCAAGGAACAACTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCAGAGGGCGATGAGGAAGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS TCA 72 bp ATGTGGGATTGGATGTCTGCCAGTATCTCAGTCACATaGGCTGTGGCCATTGCCTCTTGGATGTCCACTAGA +
Preference number: 6 (lower is better)
Translates to: MWDWMSASISVT*AVAIASWMSTR
Trigger: TCTAGTGGACATCCAAGAGGCAATGGCCACAGCTCATGTGACTGAGATACTGGCAGACATCCAATCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS GCA 72 bp CTGAGTCATCAACCTATCCATGTGGGATTGGATGTCTaGCAGTATCTCAGTCACATGAGCTGTGGCCATTGC +
Preference number: 6 (lower is better)
Translates to: LSHQPIHVGLDV*QYLSHMSCGHC
Trigger: GCAATGGCCACAGCTCATGTGACTGAGATACTGGCAGACATCCAATCCCACATGGATAGGTTGATGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS TCA 72 bp TTAGAGGTATCAAGTTGTTCCTTGGCTTGGGCCATCTaGGTCATCAACCTATCCATGTGGGATTGGATGTCT +
Preference number: 6 (lower is better)
Translates to: LEVSSCSLAWAI*VINLSMWDWMS
Trigger: AGACATCCAATCCCACATGGATAGGTTGATGACTCAGATGGCCCAAGCCAAGGAACAACTTGATACCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299413.7
ENST00000532066.1
CDS GCA 72 bp GAGGGAAAGACTCCAATCTTCTTGTTCTCAGTCTGGTaGTCTGTTCACTATAAAAGTCTGCCAGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: EGKTPIFLFSVW*SVHYKSLPEGK
Trigger: CTTCCCTTCTGGCAGACTTTTATAGTGAACAGAGCACCAGACTGAGAACAAGAAGATTGGAGTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532066.1
CDS CAA 72 bp GAGTTACCTGTAGAAGAGGGAAAGACTCCAATCTTCTaGTTCTCAGTCTGGTGCTCTGTTCACTATAAAAGT +
Preference number: 6 (lower is better)
Translates to: ELPVEEGKTPIF*FSVWCSVHYKS
Trigger: ACTTTTATAGTGAACAGAGCACCAGACTGAGAACAAGAAGATTGGAGTCTTTCCCTCTTCTACAGGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532066.1