Pregenerated sensors for TRGC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000211689Ensembl transcript IDs: ENST00000443402.6
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | TACGAAACACCATACCCAGGATTCCTGGGATCAGAGAGCATGTGCTaGACCTCTCCATCACGCTGCCTCTCTGCTTTTAGGGCAGCTCTC | + |
Preference number: 1 (lower is better) Translates to: YETPYPGFLGSESMC*TSPSRCLSAFRAAL Trigger: GAGAGCTGCCCTAAAAGCAGAGAGGCAGCGTGATGGAGAGGTTCAGCACATGCTCTCTGATCCCAGGAATCCTGGGTATGGTGTTTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 90 bp | CAGCTCTCATGGGGGTATCGTGAGGATCAGGAAACACAGTGTCTGTaGAACACTCTAGAGCTGAGCTCACACGGTACGCGTCACAGTAGA | + |
Preference number: 1 (lower is better) Translates to: QLSWGYREDQETQCL*NTLELSSHGTRHSR Trigger: TCTACTGTGACGCGTACCGTGTGAGCTCAGCTCTAGAGTGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 90 bp | TCACGCTGCCTCTCTGCTTTTAGGGCAGCTCTCATGGGGGTATCGTaGGGATCAGGAAACACAGTGTCTGTGAAACACTCTAGAGCTGAG | + |
Preference number: 1 (lower is better) Translates to: SRCLSAFRAALMGVS*GSGNTVSVKHSRAE Trigger: CTCAGCTCTAGAGTGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAGGCAGCGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 90 bp | TTTTACATGAGGAGATTATGGCACATAGAGTTCCTGGAACTCACCTaGGGTCACACAGATACGAAACACCATACCCAGGATTCCTGGGAT | + |
Preference number: 1 (lower is better) Translates to: FYMRRLWHIEFLELT*GHTDTKHHTQDSWD Trigger: ATCCCAGGAATCCTGGGTATGGTGTTTCGTATCTGTGTGACCTCAGGTGAGTTCCAGGAACTCTATGTGCCATAATCTCCTCATGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR GCA 90 bp | AGTAGAGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTTGCATGTGCCAGGACCTCTCCATCACGCTaGCTCTCTGCTTTTAGGGCA | + |
Preference number: 2 (lower is better) Translates to: SRATNSACRHCGGLACARTSPSR*LSAFRA Trigger: TGCCCTAAAAGCAGAGAGGCAGCGTGATGGAGAGGT...CCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR TCA 90 bp | AGTAGAGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTTGCATGTGCCAGGTTCCTGGAACTCACCTaGGGTCACACAGATACGAAA | + |
Preference number: 2 (lower is better) Translates to: SRATNSACRHCGGLACARFLELT*GHTDTK Trigger: TTTCGTATCTGTGTGACCTCAGGTGAGTTCCAGGAA...CCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCTCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR TCA 90 bp | GTGCCGACACTGTGGAGGACTTGCATGTGCCAGGTGTCATTAACTCATCTAATCCTCATGGGGGTATCGTaGGGATCAGGAAACACAGTG | + |
Preference number: 2 (lower is better) Translates to: VPTLWRTCMCQVSLTHLILMGVS*GSGNTV Trigger: CACTGTGTTTCCTGATCCTCACGATACCCCCATGAG...GATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCTCCACAGTGTCGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR CCA 90 bp | AGTAGAGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTTGCATGTGCCAGGTACATGAGGAGATTATaGCACATAGAGTTCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: SRATNSACRHCGGLACARYMRRL*HIEFLE Trigger: TTCCAGGAACTCTATGTGCCATAATCTCCTCATGTA...CCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCTCTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR TCA 90 bp | GCCTCTCTGCTTTTAGGGCAGCTCTCATGGGGGTATCGTGAGGATCAGGAAACACAAACAGAAGTCACATaGGCTCCTTCATTTGGTTGT | + |
Preference number: 2 (lower is better) Translates to: ASLLLGQLSWGYREDQETQTEVT*APSFGC Trigger: ACAACCAAATGAAGGAGCTCATGTGACTTCTGTTTG...TGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR-3UTR TCA 90 bp | GTGCCGACACTGTGGAGGACTTGCATGTGCCAGGTGTCATTAACTCATCTAATCGAAACACAGTGTCTGTaGAACACTCTAGAGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: VPTLWRTCMCQVSLTHLIETQCL*NTLELS Trigger: GCTCAGCTCTAGAGTGTTTCACAGACACTGTGTTTC...GATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCTCCACAGTGTCGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 72 bp | CCATACCCAGGATTCCTGGGATCAGAGAGCATGTGCTaGACCTCTCCATCACGCTGCCTCTCTGCTTTTAGG | + |
Preference number: 3 (lower is better) Translates to: PYPGFLGSESMC*TSPSRCLSAFR Trigger: CCTAAAAGCAGAGAGGCAGCGTGATGGAGAGGTTCAGCACATGCTCTCTGATCCCAGGAATCCTGGGTATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR CCA 72 bp | CATCACGCTGCCTCTCTGCTTTTAGGGCAGCTCTCATaGGGGTATCGTGAGGATCAGGAAACACAGTGTCTG | + |
Preference number: 3 (lower is better) Translates to: HHAASLLLGQLS*GYREDQETQCL Trigger: CAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAGGCAGCGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 72 bp | TGGGGGTATCGTGAGGATCAGGAAACACAGTGTCTGTaGAACACTCTAGAGCTGAGCTCACACGGTACGCGT | + |
Preference number: 3 (lower is better) Translates to: WGYREDQETQCL*NTLELSSHGTR Trigger: ACGCGTACCGTGTGAGCTCAGCTCTAGAGTGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR GCA 72 bp | AGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTTaGATGTGCCAGGTGTCATTAACTCATCTAATCCAC | + |
Preference number: 3 (lower is better) Translates to: SYQQCVPTLWRT*MCQVSLTHLIH Trigger: GTGGATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR CCA 72 bp | GGTCACACAGATACGAAACACCATACCCAGGATTCCTaGGATCAGAGAGCATGTGCTGAACCTCTCCATCAC | + |
Preference number: 3 (lower is better) Translates to: GHTDTKHHTQDS*DQRACAEPLHH Trigger: GTGATGGAGAGGTTCAGCACATGCTCTCTGATCCCAGGAATCCTGGGTATGGTGTTTCGTATCTGTGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 72 bp | CTCTCTGCTTTTAGGGCAGCTCTCATGGGGGTATCGTaGGGATCAGGAAACACAGTGTCTGTGAAACACTCT | + |
Preference number: 3 (lower is better) Translates to: LSAFRAALMGVS*GSGNTVSVKHS Trigger: AGAGTGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR GCA 72 bp | CAACAGTGCGTGCCGACACTGTGGAGGACTTGCATGTaGCAGGTGTCATTAACTCATCTAATCCACATAACT | + |
Preference number: 3 (lower is better) Translates to: QQCVPTLWRTCM*QVSLTHLIHIT Trigger: AGTTATGTGGATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR TCA 72 bp | AGGAGATTATGGCACATAGAGTTCCTGGAACTCACCTaGGGTCACACAGATACGAAACACCATACCCAGGAT | + |
Preference number: 3 (lower is better) Translates to: RRLWHIEFLELT*GHTDTKHHTQD Trigger: ATCCTGGGTATGGTGTTTCGTATCTGTGTGACCTCAGGTGAGTTCCAGGAACTCTATGTGCCATAATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR CCA 90 bp | CTCCATCACGCTGCCTCTCTGCTTTTAGGGCAGCTCTCATGGGGGTATCGTGAGTTAGGGCAGCTCTCATaGGGGTATCGTGAGGATCAG | + |
Preference number: 4 (lower is better) Translates to: LHHAASLLLGQLSWGYRELGQLS*GYREDQ Trigger: CTGATCCTCACGATACCCCCATGAGAGCTGCCCTAA...CTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAGGCAGCGTGATGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR TCA 90 bp | GGCAGCTCTCATGGGGGTATCGTGAGGATCAGGAAACACAGTGTCTGTGAAACATCAGAGAGCATGTGCTaGACCTCTCCATCACGCTGC | + |
Preference number: 4 (lower is better) Translates to: GSSHGGIVRIRKHSVCETSESMC*TSPSRC Trigger: GCAGCGTGATGGAGAGGTTCAGCACATGCTCTCTGA...TGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR GCA 90 bp | CACGCTGCCTCTCTGCTTTTAGGGCAGCTCTCATGGGGGTATCGTGAGGATCAGACACTGTGGAGGACTTaGATGTGCCAGGTGTCATTA | + |
Preference number: 4 (lower is better) Translates to: HAASLLLGQLSWGYREDQTLWRT*MCQVSL Trigger: TAATGACACCTGGCACATGCAAGTCCTCCACAGTGT...CTGATCCTCACGATACCCCCATGAGAGCTGCCCTAAAAGCAGAGAGGCAGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR TCA 90 bp | GGCAGCTCTCATGGGGGTATCGTGAGGATCAGGAAACACAGTGTCTGTGAAACACTCATGGGGGTATCGTaGGGATCAGGAAACACAGTG | + |
Preference number: 4 (lower is better) Translates to: GSSHGGIVRIRKHSVCETLMGVS*GSGNTV Trigger: CACTGTGTTTCCTGATCCTCACGATACCCCCATGAG...TGTTTCACAGACACTGTGTTTCCTGATCCTCACGATACCCCCATGAGAGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR TCA 90 bp | AGTAGAGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTTGCATGTGCCAGGCAAACAGAAGTCACATaGGCTCCTTCATTTGGTTGT | + |
Preference number: 4 (lower is better) Translates to: SRATNSACRHCGGLACARQTEVT*APSFGC Trigger: ACAACCAAATGAAGGAGCTCATGTGACTTCTGTTTG...CCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
3UTR CAA 72 bp | GAGCTACCAACAGTGCGTGCCGACACTGTGGAGGACTaGCATGTGCCAGGTGTCATTAACTCATCTAATCCA | + |
Preference number: 4 (lower is better) Translates to: ELPTVRADTVED*HVPGVINSSNP Trigger: TGGATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCTCCACAGTGTCGGCACGCACTGTTGGTAGCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR GCA 90 bp | AGGACTTGCATGTGCCAGGTGTCATTAACTCATCTAATCCACATAACTCCAGGATGGAGGACTTGCATGTaGCAGGTGTCATTAACTCAT | + |
Preference number: 4 (lower is better) Translates to: RTCMCQVSLTHLIHITPGWRTCM*QVSLTH Trigger: ATGAGTTAATGACACCTGGCACATGCAAGTCCTCCA...TCCTGGAGTTATGTGGATTAGATGAGTTAATGACACCTGGCACATGCAAGTCCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |
||
CDS-3UTR TCA 90 bp | TTGCATGTGCCAGGTGTCATTAACTCATCTAATCCACATAACTCCAGGAAACGGAATAAACTTCTAAGTTaGTTGAGGCCTGTGTCAGAT | + |
Preference number: 4 (lower is better) Translates to: LHVPGVINSSNPHNSRKRNKLLS*LRPVSD Trigger: ATCTGACACAGGCCTCAATCAACTTAGAAGTTTATT...CCGTTTCCTGGAGTTATGTGGATTAGATGAGTTAATGACACCTGGCACATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443402.6 |