Pregenerated sensors for TRBC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000211772Ensembl transcript IDs: ENST00000466254.1, ENST00000622053.4
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAGTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGAATCCTGGTGAGGATGAAGAATaGCCTGGGATGGTTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVRITFRNTDWEQVQENPGEDEE*PGMVLE Trigger: CTCCAAAACCATCCCAGGTCATTCTTCATCCTCACC...AGGATTCTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACAGATCAGCACGAGGGCACTaGCCAGCACGGCATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLAYFVLGGWELNLQGNRSARGH*PARHTR Trigger: CCTTGTATGCCGTGCTGGTCAGTGCCCTCGTGCTGA...TCTGTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR TCA 90 bp | ATTGGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACTCAGCACGAGGGCACTaGCCAGCACGGCATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: IGLAYFVLGGWELNLQGNSARGH*PARHTR Trigger: CCTTGTATGCCGTGCTGGTCAGTGCCCTCGTGCTGA...GTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CCA 90 bp | CACAGATTGGGAGCAGGTACAGGAGAATCCTGGGTGAGGATGAAGAATGACCTGGGTACAGGAGAATCCTaGGTGAGGATGAAGAATGAC | + |
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Preference number: 4 (lower is better) Translates to: HRLGAGTGESWVRMKNDLGTGES*VRMKND Trigger: GTCATTCTTCATCCTCACCCAGGATTCTCCTGTACC...CAGGTCATTCTTCATCCTCACCCAGGATTCTCCTGTACCTGCTCCCAATCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR TCA 90 bp | GTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGAATCCTGGGTGGAATCCTTTCTCTTaGCCATGGCCATCAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VRITFRNTDWEQVQENPGWNPFS*PWPSAR Trigger: TCGTGCTGATGGCCATGGTCAAGAGAAAGGATTCCA...CCCAGGATTCTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR TCA 90 bp | GGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACAGAGGTGAGGATGAAGAATaGCCTGGGATGGTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLAYFVLGGWELNLQGNRGEDEE*PGMVLE Trigger: CTCCAAAACCATCCCAGGTCATTCTTCATCCTCACC...TCTGTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACAGATTCGTACTTGGGGGTTaGGAGCTCAATCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLAYFVLGGWELNLQGNRFVLGG*ELNLQG Trigger: TCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAA...TCTGTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACAGAGGTACAGGAGAATCCTaGGTGAGGATGAAGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLAYFVLGGWELNLQGNRGTGES*VRMKND Trigger: GTCATTCTTCATCCTCACCCAGGATTCTCCTGTACC...TCTGTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CCA 90 bp | GTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGAATCCTGGGAGCCTATTTCGTACTTaGGGGTTGGGAGCTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: VRITFRNTDWEQVQENPGSLFRT*GLGAQS Trigger: AGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCT...CCCAGGATTCTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CCA 90 bp | GAGATGAGAAGCAGAGTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTATTCGTACTTGGGGGTTaGGAGCTCAATCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMRSRVRITFRNTDWEQVFVLGG*ELNLQG Trigger: TCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAA...TACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCACTCTGCTTCTCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CAA 90 bp | GTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGAATCCTGGGCTGGAATCCTTTCTCTaGACCATGGCCATCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VRITFRNTDWEQVQENPGLESFL*TMAIST Trigger: CGTGCTGATGGCCATGGTCAAGAGAAAGGATTCCAG...CCCAGGATTCTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CAA 90 bp | GGTTTAGCCTATTTCGTACTTGGGGGTTGGGAGCTCAATCTTCAGGGAAACAGATTTCGTACTTGGGGGTaGGGAGCTCAATCTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GLAYFVLGGWELNLQGNRFRTWG*GAQSSG Trigger: CCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAA...TCTGTTTCCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAATAGGCTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGAGTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGTTTCGTACTTGGGGGTaGGGAGCTCAATCTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RSRVRITFRNTDWEQVQEFRTWG*GAQSSG Trigger: CCCTGAAGATTGAGCTCCCAACCCCCAAGTACGAAA...CTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCACTCTGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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| CDS-3UTR CAA 90 bp | AGAGTGAGAATCACTTTTAGGAACACAGATTGGGAGCAGGTACAGGAGAATCCTCTGGAATCCTTTCTCTaGACCATGGCCATCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: RVRITFRNTDWEQVQENPLESFL*TMAIST Trigger: CGTGCTGATGGCCATGGTCAAGAGAAAGGATTCCAG...AGGATTCTCCTGTACCTGCTCCCAATCTGTGTTCCTAAAAGTGATTCTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466254.1 ENST00000622053.4 |
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