RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000082512

Ensembl transcript IDs: ENST00000261464.10, ENST00000336184.6, ENST00000367004.3, ENST00000462410.5, ENST00000473385.1, ENST00000488428.1, ENST00000494355.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATaGGCAGTAGGGAAGTGGCATAACAACGCAGAAGGGCTCAGGACA +
Preference number: 1 (lower is better)
Translates to: WPILILACPGEPACI*AVGKWHNNAEGLRT
Trigger: TGTCCTGAGCCCTTCTGCGTTGTTATGCCACTTCCCTACTGCTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR TCA 90 bp TGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTaGGCAACCGTGCCACAGTTCACCAGCAGTGACACTCTAGTTCTT +
Preference number: 1 (lower is better)
Translates to: CGLKKCFLNLSEVMC*ATVPQFTSSDTLVL
Trigger: AAGAACTAGAGTGTCACTGCTGGTGAACTGTGGCACGGTTGCTCAACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR TCA 90 bp GTCCGAGGTGATGTGTTGAGCAACCGTGCCACAGTTCACCAGCAGTaGCACTCTAGTTCTTCAGTATATTCCTGTTGTGAACCTATTTCT +
Preference number: 1 (lower is better)
Translates to: VRGDVLSNRATVHQQ*HSSSSVYSCCEPIS
Trigger: AGAAATAGGTTCACAACAGGAATATACTGAAGAACTAGAGTGTCACTGCTGGTGAACTGTGGCACGGTTGCTCAACACATCACCTCGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 90 bp CACCCACTACTTAACTGGAACAGCCTACCTTATAAAGATGGCTTTTaGAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATAAA +
Preference number: 1 (lower is better)
Translates to: HPLLNWNSLPYKDGF*RLKARSRINRPNNK
Trigger: TTTATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGTTCCAGTTAAGTAGTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CCA 90 bp ATGAATATTAAAAACAAACATACAGAGCACCTGGGTCTGGACTTGTaGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTG +
Preference number: 1 (lower is better)
Translates to: MNIKNKHTEHLGLDL*AKEMLPEFVRGDVL
Trigger: CAACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTTTGTTTTTAATATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 90 bp GAGATTAAGAAGGTTCCTCTTCCCAGAAGACACTCATATAAAGCATaGTTCTATAGGGTTAACTGTTCAGAAATTGTAAGGTGCATGGTC +
Preference number: 1 (lower is better)
Translates to: EIKKVPLPRRHSYKA*FYRVNCSEIVRCMV
Trigger: GACCATGCACCTTACAATTTCTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAGGAACCTTCTTAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGAGTTTGCAGTGAGCTaGGATCATGCCACTGTACTC +
Preference number: 2 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEEFAVS*DHATVL
Trigger: GAGTACAGTGGCATGATCTCAGCTCACTGCAAACTC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGCCCATACTCATCCTTaGGTGCCCAGGGGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCAHTHP*VPRGAS
Trigger: GCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGGCGGGCAGATCACTTaGGGTCAGGAGTTTGAGATC +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDGGQIT*GQEFEI
Trigger: GATCTCAAACTCCTGACCTCAAGTGATCTGCCCGCC...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAGGCAGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDRQSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCTGCCT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAGTGAGCTGAGATCATaGCACTGTACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDSELRS*HCTPAW
Trigger: CCAGGCTGGAGTACAGTGGCATGATCTCAGCTCACT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGGCCCATACTCATCCTTaGGTGCCCAGGGGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQAHTHP*VPRGAS
Trigger: GCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGC...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGATACTCATCCTTGCGTaGCCAGGGGAGCCAGCGTGC +
Preference number: 2 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQILILA*PGEPAC
Trigger: GCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTAT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTCTCCTCCACAGTTCTaGCCCCAAGAAGTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCSPPQF*PQEVLL
Trigger: TAAGAGGACTTCTTGGGGCCAGAACTGTGGAGGAGA...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAGCCTTGCAAAACTGTaGTTGCAAACTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDSLAKL*LQTAGE
Trigger: TTCACCAGCAGTTTGCAAGCACAGTTTTGCAAGGCT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAGTTTGAGATCAGCTTaGCCAACATGGCAAAACTCC +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDSLRSA*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGGCAGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQRQSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCTGCCT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTAGCCTTGCAAAACTGTaGTTGCAAACTGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCSLAKL*LQTAGE
Trigger: TTCACCAGCAGTTTGCAAGCACAGTTTTGCAAGGCT...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGTGAGCTGAGATCATaGCACTGTACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQSELRS*HCTPAW
Trigger: CCAGGCTGGAGTACAGTGGCATGATCTCAGCTCACT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTTTAATCATCTGGGATaGTTGCTGCAGTGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCFNHLG*LLQCES
Trigger: AGACTCACACTGCAGCAATCATCCCAGATGATTAAA...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTATTCACCAGTTCTTATaGAGCCTTGCAAAACTGTGC +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCIHQFL*SLAKLC
Trigger: GCACAGTTTTGCAAGGCTGCATAAGAACTGGTGAAT...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCTATGCAGTACTTTCTaGTTTACTTCAGCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDLCSTF*FTSAGR
Trigger: TCTTCCTGCTGAAGTAAAGCAGAAAGTACTGCATAG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGAACCTAACAAAATCTaGACTTTAGCTAGCTGGCTA +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCEPNKI*TLASWL
Trigger: TAGCCAGCTAGCTAAAGTTCAGATTTTGTTAGGTTC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATTTGAATTTAATCATCTaGGATGATTGCTGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDLNLII*DDCCSV
Trigger: CACACTGCAGCAATCATCCCAGATGATTAAATTCAA...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR TCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGAGTACTCAGAATTCTaGCAAGAAACATCACAAGTT +
Preference number: 2 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCEYSEF*QETSQV
Trigger: AACTTGTGATGTTTCTTGTCAGAATTCTGAGTACTC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATACTCAATATTTAGAGTaGCCGAGACACTGCGCTAAG +
Preference number: 2 (lower is better)
Translates to: KDGFCRLKARSRINRPNNTQYLE*PRHCAK
Trigger: CTTAGCGCAGTGTCTCGGGCACTCTAAATATTGAGT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTCGGGAGGCAGAGTTTaGAGTGAGCTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSSGGRV*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAAACTCTGCCTCCCGA...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CAA 90 bp ATGATGAATATTAAAAACAAACATACAGAGCACCTGGGTCTGGACTaGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTG +
Preference number: 2 (lower is better)
Translates to: MMNIKNKHTEHLGLD*WAKEMLPEFVRGDV
Trigger: CACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTTTGTTTTTAATATTCATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTTCAACTGGGATTCTaGTACCTCTGTGTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFQLGF*YLCVLH
Trigger: ATGGAGGACACAGAGGTAGCAGAATCCCAGTTGAAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTACTCAATATTTAGAGTaGCCGAGACACTGCGCTAAG +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSTQYLE*PRHCAK
Trigger: CTTAGCGCAGTGTCTCGGGCACTCTAAATATTGAGT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTTTCAACTGGGATTCTaGTACCTCTGTGTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSFQLGF*YLCVLH
Trigger: ATGGAGGACACAGAGGTAGCAGAATCCCAGTTGAAA...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTAGTTTGAGATCAGCTTaGCCAACATGGCAAAACTCC +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSSLRSA*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTGTTCTTATGCAGCCTTaGAAAACTGTGCTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSVLMQP*KTVLAN
Trigger: GTTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAAC...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTATAAAGATGGCTTTTaGAGACTTAAGGCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSYKDGF*RLKARS
Trigger: AGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATA...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTCAAAACATTTTCAACTaGGATTCTGCTACCTCTGTG +
Preference number: 2 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSQNIFN*DSATSV
Trigger: CACAGAGGTAGCAGAATCCCAGTTGAAAATGTTTTG...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CAA 90 bp TTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTaGTATATACACCTTCAGACCCATACAGATAGATGCATAAGAATA +
Preference number: 2 (lower is better)
Translates to: LLNSGLSRVIRTHLS*YIHLQTHTDRCIRI
Trigger: TATTCTTATGCATCTATCTGTATGGGTCTGAAGGTGTATATACAAACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 72 bp GCAGCTCTACAGGGGCCCATGGCCCATACTCATCCTTaGGTGCCCAGGGGAGCCAGCGTGCATATGAGCAGT +
Preference number: 3 (lower is better)
Translates to: AALQGPMAHTHP*VPRGASVHMSS
Trigger: ACTGCTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGCCCCTGTAGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CCA 72 bp TGGTCATCACCAGGTAAGCAGCTCTACAGGGGCCCATaGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: WSSPGKQLYRGP*PILILACPGEP
Trigger: TGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGCCCCTGTAGAGCTGCTTACCTGGTGATGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR TCA 72 bp CTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATaGGCAGTAGGGAAGTGGCATAACAACGCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: LILACPGEPACI*AVGKWHNNAEG
Trigger: CCCTTCTGCGTTGTTATGCCACTTCCCTACTGCTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGAGTTTGAGATCAGCTaGGCCAACATGGCAAAACTC +
Preference number: 3 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEEFEIS*ANMAKL
Trigger: GAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACTC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGAGTTCTTATGCAGCCTaGCAAAACTGTGCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYESSYAA*QNCACK
Trigger: TTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAACT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGGCCCATACTCATCCTaGCGTGCCCAGGGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCGPYSS*RAQGSQ
Trigger: CTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR TCA 72 bp AAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTaGGCAACCGTGCCACAGTTCACCAGCAGTGACACT +
Preference number: 3 (lower is better)
Translates to: KKCFLNLSEVMC*ATVPQFTSSDT
Trigger: AGTGTCACTGCTGGTGAACTGTGGCACGGTTGCTCAACACATCACCTCGGACAAATTCAGGAAGCATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTCTTGAGGTCAGGAGTTaGAGATCAGCTTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCLEVRS*RSAWPT
Trigger: TGTTGGCCAAGCTGATCTCAAACTCCTGACCTCAAG...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCTTGCAAAACTGTGCTaGCAAACTGCTGGTGAATTT +
Preference number: 3 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDLAKLC*QTAGEF
Trigger: AAATTCACCAGCAGTTTGCAAGCACAGTTTTGCAAG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGACAACTTGGCATTTTaGTTGTTGTTAAACTCAGGC +
Preference number: 3 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDDNLAF*LLLNSG
Trigger: GCCTGAGTTTAACAACAACAAAAATGCCAAGTTGTC...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CCA 72 bp CAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTaGCCCCAAGAAGTCCTCTTATCACCCCATAACAGT +
Preference number: 3 (lower is better)
Translates to: QYDNQMCSPPQF*PQEVLLSPHNS
Trigger: ACTGTTATGGGGTGATAAGAGGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
3UTR CCA 72 bp AAAAACAAACATACAGAGCACCTGGGTCTGGACTTGTaGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGT +
Preference number: 3 (lower is better)
Translates to: KNKHTEHLGLDL*AKEMLPEFVRG
Trigger: ACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCTATCCATCCTCACATaGATTTATTACTGTCACCAA +
Preference number: 3 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDLSILT*IYYCHQ
Trigger: TTGGTGACAGTAATAAATCAATGTGAGGATGGATAG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 72 bp CTTAACTGGAACAGCCTACCTTATAAAGATGGCTTTTaGAGACTTAAGGCCAGGTCTAGAATCAATAGGCCA +
Preference number: 3 (lower is better)
Translates to: LNWNSLPYKDGF*RLKARSRINRP
Trigger: TGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGTTCCAGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCCTTGAGGTCAGGAGTTaGAGATCAGCTTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLLEVRS*RSAWPT
Trigger: TGTTGGCCAAGCTGATCTCAAACTCCTGACCTCAAG...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 72 bp CCCATTCACCAGTTCTTATGCAGCCTTGCAAAACTGTaGTTGCAAACTGCTGGTGAATTTCATGAAAATACT +
Preference number: 3 (lower is better)
Translates to: PIHQFLCSLAKL*LQTAGEFHENT
Trigger: AGTATTTTCATGAAATTCACCAGCAGTTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAACTGGTGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCTTGCAAAACTGTGCTaGCAAACTGCTGGTGAATTT +
Preference number: 3 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQLAKLC*QTAGEF
Trigger: AAATTCACCAGCAGTTTGCAAGCACAGTTTTGCAAG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGGACTCATCTCAGTTaGTATATACACCTTCAGACC +
Preference number: 3 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQRTHLS*YIHLQT
Trigger: GGTCTGAAGGTGTATATACAAACTGAGATGAGTCCT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGGGCTCAGGACAACTaGGCATTTTTGTTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQRAQDN*AFLLLL
Trigger: TAACAACAACAAAAATGCCAAGTTGTCCTGAGCCCT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR GCA 72 bp CTACTTAAAAGAAGTTACAGCAATATGATCTTCCACTaGTCAGGAAGACAGAGTGAACTTGGATATGATGAA +
Preference number: 3 (lower is better)
Translates to: LLKRSYSNMIFH*SGRQSELGYDE
Trigger: TTCATCATATCCAAGTTCACTCTGTCTTCCTGAGCAGTGGAAGATCATATTGCTGTAACTTCTTTTAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTGCTGGCAGAAGCGGTaGCCACATCCTGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYECWQKR*PHPVWW
Trigger: CCACCAGACAGGATGTGGGCACCGCTTCTGCCAGCA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGATACTCATCCTTGCGTaGCCAGGGGAGCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEILILA*PGEPAC
Trigger: GCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTAT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CAA 72 bp AGCAGCTCTACAGGGGCCCATGGCCCATACTCATCCTaGCGTGCCCAGGGGAGCCAGCGTGCATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSTGAHGPYSS*RAQGSQRAYEQ
Trigger: CTGCTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGCCCCTGTAGAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTGTGTTGAGCAACCGTaGCACAGTTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYECVEQP*HSSPAV
Trigger: CACTGCTGGTGAACTGTGGCACGGTTGCTCAACACA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTCTCCTCCACAGTTCTaGCCCCAAGAAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYESPPQF*PQEVLL
Trigger: TAAGAGGACTTCTTGGGGCCAGAACTGTGGAGGAGA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGCAGAGCACCTGGGTCTaGACTTGTGGGCTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEQSTWV*TCGLKK
Trigger: TTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTG...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGAACATACAGAGCACCTaGGTCTGGACTTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYENIQST*VWTCGL
Trigger: TAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGCTGACTTGTCAATGTaGCTGGCAAAAACCTGGATG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEADLSM*LAKTWM
Trigger: CATCCAGGTTTTTGCCAGTCACATTGACAAGTCAGC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGAATGCTCATGTTGCTaGAGGTTCCTCCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEECSCC*RFLRLS
Trigger: GGATAAACGGAGGAACCTGCAGCAACATGAGCATTC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEKTKRM*SRKAEC
Trigger: GCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCATCCGCGAGGCCGGTCTaGAGGCGCGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESSARPV*RRGCCS
Trigger: GGAGCAGCAGCCGCGCCTGCAGACCGGCCTCGCGGA...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261464.10
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTTTCAACTGGGATTCTaGTACCTCTGTGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEFQLGF*YLCVLH
Trigger: ATGGAGGACACAGAGGTAGCAGAATCCCAGTTGAAA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGAAGTTACAGCAATATaGTCTTCCACTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEEVTAI*SSTAQE
Trigger: TTCCTGAGCAGTGGAAGATCATATTGCTGTAACTTC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGGTTCTTATGCAGCCTTaGAAAACTGTGCTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEVLMQP*KTVLAN
Trigger: GTTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAAC...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTGTGGGCTAAAGAAATaGTTCCTGAATTTGTCCGAG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYECGLKK*FLNLSE
Trigger: CTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGGGTCACCCTCTGCCTaGATGGCCACTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDGSPSA*MATATV
Trigger: CACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCC...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCTGAATAAGCCATTGTaGGGCTCGGCGCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLNKPL*GSARGL
Trigger: GAGCCCGCGCGCCGAGCCCCACAATGGCTTATTCAG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261464.10
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGCAAAACATTTTCAACTaGGATTCTGCTACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEQNIFN*DSATSV
Trigger: CACAGAGGTAGCAGAATCCCAGTTGAAAATGTTTTG...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGTCTGGTGGGGGTTGTaGAGCACCGAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVVWWGL*STEWQK
Trigger: CTTCTGCCACTCGGTGCTTCACAACCCCCACCAGAC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGAAAACGGCTAATCTTTaGTCATTGTTTTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEKTANL*SLFSSR
Trigger: CCTGCTAGAAAACAATGATCAAAGATTAGCCGTTTT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGGGTCACCCTCTGCCTaGATGGCCACTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCGSPSA*MATATV
Trigger: CACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGGGTCACCCTCTGCCTaGATGGCCACTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSGSPSA*MATATV
Trigger: CACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGATGATTGCTGCAGTGTaGGTCTTTAGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEMIAAV*VFSILK
Trigger: TTTCAAAATGCTAAAGACTCACACTGCAGCAATCAT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTGCTGGCAGAAGCGGTaGCCACATCCTGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVCWQKR*PHPVWW
Trigger: CCACCAGACAGGATGTGGGCACCGCTTCTGCCAGCA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAGGGACAGGATGCAGTaGTGGCAGAAGCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSRDRMQ*WQKRCP
Trigger: TGGGCACCGCTTCTGCCAGCACTGCATCCTGTCCCT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTCTTCGCACAATTGTTaGGACAAAATACTGGGTATT +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYESSHNC*DKILGI
Trigger: AATACCCAGTATTTTGTCCCAACAATTGTGCGAAGA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGAAAAACCTGGATGTTTaGGAGGAAGCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEKNLDV*EEASIF
Trigger: AAAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTT...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTTGAATTTAATCATCTaGGATGATTGCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYELNLII*DDCCSV
Trigger: CACACTGCAGCAATCATCCCAGATGATTAAATTCAA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTCATCCATGAAACCGTaGGCAGGACACCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSSSMKP*AGHPTA
Trigger: GGCTGTGGGGTGTCCTGCTCACGGTTTCATGGATGA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367004.3
CDS-3UTR GCA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTACATCCAGGAGCATTaGTGCAATATACATATAAGT +
Preference number: 4 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEYIQEH*CNIHIS
Trigger: ACTTATATGTATATTGCAGCAATGCTCCTGGATGTA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGAGTTGCCGGAATTCTaGCGGATGAAACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDELPEF*RMKPQG
Trigger: GCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTC...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTCTCTACAGGGGCCCATaGCCCATACTCATCCTTGCG +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCLYRGP*PILILA
Trigger: CGCAAGGATGAGTATGGGCCATGGGCCCCTGTAGAG...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTCCGAGGTGATGTGTTaGGCAACCGTGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSSEVMC*ATVPQF
Trigger: GAACTGTGGCACGGTTGCTCAACACATCACCTCGGA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAAGATGGACACTGTGTaGCCATCCACCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSKMDTV*PSTASL
Trigger: GAGAGAGGCGGTGGATGGGCACACAGTGTCCATCTT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCAAGATGGACACTGTGTaGCCATCCACCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVKMDTV*PSTASL
Trigger: GAGAGAGGCGGTGGATGGGCACACAGTGTCCATCTT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCATCAGGGTCACCCTCTaGCTGAATGGCCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSIRVTL*LNGHCN
Trigger: GTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGAT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCATCAGGGTCACCCTCTaGCTGAATGGCCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVIRVTL*LNGHCN
Trigger: GTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGAT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGCGGGGACAGCCAGATaGAATGTTCATCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVAGTAR*NVHLPI
Trigger: GATGGGGAGATGAACATTGCATCTGGCTGTCCCCGC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAGCCCATACTCATCCTTaGGTGCCCAGGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLAHTHP*VPRGAS
Trigger: GCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGC...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGAGTTGCCGGAATTCTaGCGGATGAAACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVELPEF*RMKPQG
Trigger: GCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGAGTTGCCGGAATTCTaGCGGATGAAACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSELPEF*RMKPQG
Trigger: GCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTGGCCACTGCAACAGTaGGTCAAACTCTCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVWPLQQ*VKLSSH
Trigger: ATGCGAGGAGAGTTTGACTCACTGTTGCAGTGGCCA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTCGGGAGGCAGAGTTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCSGGRV*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAAACTCTGCCTCCCGA...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACTCTACAGGGGCCCATaGCCCATACTCATCCTTGCG +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLYRGP*PILILA
Trigger: CGCAAGGATGAGTATGGGCCATGGGCCCCTGTAGAG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCAGAGCACCTGGGTCTaGACTTGTGGGCTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDQSTWV*TCGLKK
Trigger: TTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTTCTCCAAAACAGAATaGGCCACAAAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVFSKTE*ATKRGQ
Trigger: CTGTCCCCGCTTTGTGGCTCATTCTGTTTTGGAGAA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAGAGCCAGCGTGCATATaGGCAGTAGGGAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESEPACI*AVGKWH
Trigger: ATGCCACTTCCCTACTGCTCATATGCACGCTGGCTC...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTCCCGTAAGGCTGAATaGTCATGTTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVSRKAE*SCCCRF
Trigger: GAACCTGCAGCAACATGAGCATTCAGCCTTACGGGA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTCCCGTAAGGCTGAATaGTCATGTTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSSRKAE*SCCCRF
Trigger: GAACCTGCAGCAACATGAGCATTCAGCCTTACGGGA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCATCCCCATTCAGGTATaGTCTAGCACAGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVIPIQV*SSTEPV
Trigger: TACCGGCTCTGTGCTAGAGCATACCTGAATGGGGAT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATTGCCTGAATGGCCACTaGAACAGTGAGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDCLNGH*NSESNS
Trigger: AGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCA...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAACCGCTCCACAAACTaGTACTCTATACTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDNRSTN*YSILGS
Trigger: TGAGCCCAGTATAGAGTACCAGTTTGTGGAGCGGTT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTCTCCTCCACAGTTCTaGCCCCAAGAAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSSPPQF*PQEVLL
Trigger: TAAGAGGACTTCTTGGGGCCAGAACTGTGGAGGAGA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCTGGGTCTGGACTTGTaGGCTAAAGAAATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDLGLDL*AKEMLP
Trigger: AGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCGTCTGGTGGGGGTTGTaGAGCACCGAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLVWWGL*STEWQK
Trigger: CTTCTGCCACTCGGTGCTTCACAACCCCCACCAGAC...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGCTGACTTGTCAATGTaGCTGGCAAAAACCTGGATG +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSADLSM*LAKTWM
Trigger: CATCCAGGTTTTTGCCAGTCACATTGACAAGTCAGC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCAAACTCTCCTCGCATaGCCACAAAGTATAGGGACA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSQTLLA*PQSIGT
Trigger: TGTCCCTATACTTTGTGGTCATGCGAGGAGAGTTTG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAGAGCCAGCGTGCATATaGGCAGTAGGGAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLEPACI*AVGKWH
Trigger: ATGCCACTTCCCTACTGCTCATATGCACGCTGGCTC...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGGGACAGGATGCAGTaGTGGCAGAAGCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLRDRMQ*WQKRCP
Trigger: TGGGCACCGCTTCTGCCAGCACTGCATCCTGTCCCT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATCAGGATGCACTCAAATaGTCTTTCAGGTCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDQDALK*SFRSFR
Trigger: ACGGAAAGACCTGAAAGAGCATTTGAGTGCATCCTG...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGAATGCTCATGTTGCTaGAGGTTCCTCCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCECSCC*RFLRLS
Trigger: GGATAAACGGAGGAACCTGCAGCAACATGAGCATTC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGAATGCTCATGTTGCTaGAGGTTCCTCCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSECSCC*RFLRLS
Trigger: GGATAAACGGAGGAACCTGCAGCAACATGAGCATTC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGCTGAATGCTCATGTTaGTGCAGGTTCCTCCGTTTA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSAECSC*CRFLRL
Trigger: TAAACGGAGGAACCTGCAGCAACATGAGCATTCAGC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSKTKRM*SRKAEC
Trigger: GCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATAAGATGGACACTGTGTaGCCATCCACCGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNKMDTV*PSTASL
Trigger: GAGAGAGGCGGTGGATGGGCACACAGTGTCCATCTT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTGCCTGAATGGCCACTaGAACAGTGAGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSCLNGH*NSESNS
Trigger: AGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGGCGGGGACAGCCAGATaGAATGTTCATCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQAGTAR*NVHLPI
Trigger: GATGGGGAGATGAACATTGCATCTGGCTGTCCCCGC...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCATCGGGAGGCAGAGTTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESSGGRV*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAAACTCTGCCTCCCGA...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCAACCGCTCCACAAACTaGTACTCTATACTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVNRSTN*YSILGS
Trigger: TGAGCCCAGTATAGAGTACCAGTTTGTGGAGCGGTT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAACCGCTCCACAAACTaGTACTCTATACTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSNRSTN*YSILGS
Trigger: TGAGCCCAGTATAGAGTACCAGTTTGTGGAGCGGTT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTTCTTTTTGCCACTCTaGTCCAGAAGCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVFFLPL*SRSIRV
Trigger: GACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTCTTTTTGCCACTCTaGTCCAGAAGCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSFFLPL*SRSIRV
Trigger: GACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTCACTGTACTCCAGCCTaGGTGACAATGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCHCTPA*VTMKLC
Trigger: ACAGAGTTTCATTGTCACCCAGGCTGGAGTACAGTG...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTCTGGGTCTGGACTTGTaGGCTAAAGAAATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCLGLDL*AKEMLP
Trigger: AGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTGTCTGGTGGGGGTTGTaGAGCACCGAGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSVWWGL*STEWQK
Trigger: CTTCTGCCACTCGGTGCTTCACAACCCCCACCAGAC...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTGGCCACTGCAACAGTaGGTCAAACTCTCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNWPLQQ*VKLSSH
Trigger: ATGCGAGGAGAGTTTGACTCACTGTTGCAGTGGCCA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATAGGCAGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNRQSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCTGCCT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAAGGCAGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLRQSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCTGCCT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAGGATGCACTCAAATaGTCTTTCAGGTCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVQDALK*SFRSFR
Trigger: ACGGAAAGACCTGAAAGAGCATTTGAGTGCATCCTG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCAGCCTTGCAAAACTGTaGTTGCAAACTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVSLAKL*LQTAGE
Trigger: TTCACCAGCAGTTTGCAAGCACAGTTTTGCAAGGCT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAAGTGAGCTGAGATCATaGCACTGTACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLSELRS*HCTPAW
Trigger: CCAGGCTGGAGTACAGTGGCATGATCTCAGCTCACT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTATACTCATCCTTGCGTaGCCAGGGGAGCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSILILA*PGEPAC
Trigger: GCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTAT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTGTGTTGAGCAACCGTaGCACAGTTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNCVEQP*HSSPAV
Trigger: CACTGCTGGTGAACTGTGGCACGGTTGCTCAACACA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATTGTGGGCTAAAGAAATaGTTCCTGAATTTGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDCGLKK*FLNLSE
Trigger: CTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACA...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGTTCTCCAAAACAGAATaGGCCACAAAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQFSKTE*ATKRGQ
Trigger: CTGTCCCCGCTTTGTGGCTCATTCTGTTTTGGAGAA...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAGAGTTTGCAGTGAGCTaGGATCATGCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLEFAVS*DHATVL
Trigger: GAGTACAGTGGCATGATCTCAGCTCACTGCAAACTC...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTCCGAGGTGATGTGTTaGGCAACCGTGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLSEVMC*ATVPQF
Trigger: GAACTGTGGCACGGTTGCTCAACACATCACCTCGGA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAACAAGTCCAGTCATCTaGTTTCCCTCACGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLTSPVI*FPSRAS
Trigger: AGACGCACGTGAGGGAAATCAGATGACTGGACTTGT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336184.6
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCACCTTTATGCTCTTCTaGATAAGCCATTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVTFMLF*ISHSAS
Trigger: TGAAGCGGAATGGCTTATTCAGAAGAGCATAAAGGT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTATCCCGTAAGGCTGAATaGTCATGTTGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLSRKAE*SCCCRF
Trigger: GAACCTGCAGCAACATGAGCATTCAGCCTTACGGGA...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGATCCCCATTCAGGTATaGTCTAGCACAGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQIPIQV*SSTEPV
Trigger: TACCGGCTCTGTGCTAGAGCATACCTGAATGGGGAT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATATCCCCATTCAGGTATaGTCTAGCACAGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNIPIQV*SSTEPV
Trigger: TACCGGCTCTGTGCTAGAGCATACCTGAATGGGGAT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCATCAGGGTCACCCTCTaGCTGAATGGCCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLIRVTL*LNGHCN
Trigger: GTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGAT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCGCGGGGACAGCCAGATaGAATGTTCATCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLAGTAR*NVHLPI
Trigger: GATGGGGAGATGAACATTGCATCTGGCTGTCCCCGC...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCACTGGTACTCTATACTaGGCTCAAAGTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVTGTLY*AQSPRK
Trigger: TTTCCTTGGACTTTGAGCCCAGTATAGAGTACCAGT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGTCTCCTCCACAGTTCTaGCCCCAAGAAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQSPPQF*PQEVLL
Trigger: TAAGAGGACTTCTTGGGGCCAGAACTGTGGAGGAGA...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCACTGTGCAAACTGCTTaGACTCCTTTTCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVTVQTA*TPFQVS
Trigger: AGAAACTTGAAAAGGAGTTCAAGCAGTTTGCACAGT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCACCTTTATGCTCTTCTaGATAAGCCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVTFMLF*ISHSSM
Trigger: CATGGATGAATGGCTTATTCAGAAGAGCATAAAGGT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTAAAAGGACAGTCTTaGTCAGCTTCAGGACATACA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLKGQS*SASGHT
Trigger: TGTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAGCTGAATGCTCATGTTaGTGCAGGTTCCTCCGTTTA +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLAECSC*CRFLRL
Trigger: TAAACGGAGGAACCTGCAGCAACATGAGCATTCAGC...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLKTKRM*SRKAEC
Trigger: GCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTTGCCAAACAACTGTaGAAACTGCTTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSFAKQL*KLLELL
Trigger: AAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGGAAGCTTCCATTTTTaGCAAACAACTGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSGSFHF*QTTVQT
Trigger: AGTTTGCACAGTTGTTTGGCAAAAATGGAAGCTTCC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGGAAGCTTCCATTTTTaGCAAACAACTGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVGSFHF*QTTVQT
Trigger: AGTTTGCACAGTTGTTTGGCAAAAATGGAAGCTTCC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTTCACTGTATCAACTaGTTCCATCAAAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSFHCIN*FHQRSQ
Trigger: CTGAGACCTTTGATGGAAGCAGTTGATACAGTGAAA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAACTCAATATTTAGAGTaGCCGAGACACTGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESTQYLE*PRHCAK
Trigger: CTTAGCGCAGTGTCTCGGGCACTCTAAATATTGAGT...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTGAGCTGAGATCATaGCACTGTACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLSELRS*HCTPAW
Trigger: CCAGGCTGGAGTACAGTGGCATGATCTCAGCTCACT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTAATATGATCTTCCACTaGTCAGGAAGACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCNMIFH*SGRQSE
Trigger: TTCACTCTGTCTTCCTGAGCAGTGGAAGATCATATT...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAATATGATCTTCCACTaGTCAGGAAGACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSNMIFH*SGRQSE
Trigger: TTCACTCTGTCTTCCTGAGCAGTGGAAGATCATATT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCAAAGTCCAAGGAAATaGAGTTGCCGGAATTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQQSPRK*SCRNSG
Trigger: GCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATAAAAACCTGGATGTTTaGGAGGAAGCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDKNLDV*EEASIF
Trigger: AAAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTT...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCACTTGTCAATGTGACTaGCAAAAACCTGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVTCQCD*QKPGCL
Trigger: CAAACATCCAGGTTTTTGCCAGTCACATTGACAAGT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
3UTR CAA 72 bp CAACGCAGAAGGGCTCAGGACAACTTGGCATTTTTGTaGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: QRRRAQDNLAFL*LLNSGLSRVIR
Trigger: CCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGCCAAGTTGTCCTGAGCCCTTCTGCGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGACCTTTATGCTCTTCTaGATAAGCCATTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQTFMLF*ISHCGA
Trigger: AGCCCCACAATGGCTTATTCAGAAGAGCATAAAGGT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261464.10
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCACAAGTTTTCCTCATaGTTCTGTAGATTGATGACT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVHKFSS*FCRLMT
Trigger: AGTCATCAATCTACAGAATCATGAGGAAAACTTGTG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAAAACGGCTAATCTTTaGTCATTGTTTTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSKTANL*SLFSSR
Trigger: CCTGCTAGAAAACAATGATCAAAGATTAGCCGTTTT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR TCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTCTCCAAAACAGAATaGGCCACAAAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFSKTE*ATKRGQ
Trigger: CTGTCCCCGCTTTGTGGCTCATTCTGTTTTGGAGAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACTTCAGCAGGAAGAATaGAAATGCTTACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLQQEE*KCLPHS
Trigger: TGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGAGTACTCAGAATTCTaGCAAGAAACATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVEYSEF*QETSQV
Trigger: AACTTGTGATGTTTCTTGTCAGAATTCTGAGTACTC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATCAGGATGCACTCAAATaGTCTTTCAGGTCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNQDALK*SFRSFR
Trigger: ACGGAAAGACCTGAAAGAGCATTTGAGTGCATCCTG...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAACAACTGTGCAAACTaGTTGAACTCCTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSNNCAN*LNSFSS
Trigger: ACTTGAAAAGGAGTTCAAGCAGTTTGCACAGTTGTT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAGTTCTTATGCAGCCTTaGAAAACTGTGCTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESVLMQP*KTVLAN
Trigger: GTTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAAC...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTCTTCGCACAATTGTTaGGACAAAATACTGGGTATT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVSSHNC*DKILGI
Trigger: AATACCCAGTATTTTGTCCCAACAATTGTGCGAAGA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGTTTCTGCTAGCTGCTaGATTTTACTTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSVSASC*ILLSFC
Trigger: ACAGAAAGAAAGTAAAATCCAGCAGCTAGCAGAAAC...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCAAAAACCTGGATGTTTaGGAGGAAGCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVKNLDV*EEASIF
Trigger: AAAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGTTTGAGATCAGCTTaGCCAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQSLRSA*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAACATACAGAGCACCTaGGTCTGGACTTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLNIQST*VWTCGL
Trigger: TAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CAA 72 bp ATTAAAAACAAACATACAGAGCACCTGGGTCTGGACTaGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGA +
Preference number: 4 (lower is better)
Translates to: IKNKHTEHLGLD*WAKEMLPEFVR
Trigger: TCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTGCTCTGTATGTTTGTTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTACTTCAGCAGGAAGAATaGAAATGCTTACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLLQQEE*KCLPHS
Trigger: TGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAG...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAGAACCTAACAAAATCTaGACTTTAGCTAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESEPNKI*TLASWL
Trigger: TAGCCAGCTAGCTAAAGTTCAGATTTTGTTAGGTTC...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTATTTAATCATCTGGGATaGTTGCTGCAGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLFNHLG*LLQCES
Trigger: AGACTCACACTGCAGCAATCATCCCAGATGATTAAA...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGGAAGTTACAGCAATATaGTCTTCCACTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQEVTAI*SSTAQE
Trigger: TTCCTGAGCAGTGGAAGATCATATTGCTGTAACTTC...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTACATCCAGGAGCATTaGTGCAATATACATATAAGT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVYIQEH*CNIHIS
Trigger: ACTTATATGTATATTGCAGCAATGCTCCTGGATGTA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCATTAAAAGGACAGTCTTaGTCAGCTTCAGGACATACA +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLKGQS*SASGHT
Trigger: TGTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAA...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCATAGTTTCTGCTAGCTaGTGGATTTTACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVIVSAS*WILLSF
Trigger: GAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTAT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATATTCACCAGTTCTTATaGAGCCTTGCAAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNIHQFL*SLAKLC
Trigger: GCACAGTTTTGCAAGGCTGCATAAGAACTGGTGAAT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAATTCACCAGTTCTTATaGAGCCTTGCAAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLIHQFL*SLAKLC
Trigger: GCACAGTTTTGCAAGGCTGCATAAGAACTGGTGAAT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCACTCATATAAAGCATaGTTCTATAGGGTTAACTGT +
Preference number: 4 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVHSYKA*FYRVNC
Trigger: ACAGTTAACCCTATAGAAGCATGCTTTATATGAGTG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCTCCTAAGCAAACCATaGCATGACATACTTTATATA +
Preference number: 4 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLLSKP*HDILYI
Trigger: TATATAAAGTATGTCATGGCATGGTTTGCTTAGGAG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTCTTTTTGCCACTCTaGTCCAGAAGCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFFLPL*SRSIRV
Trigger: GACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACAAAACATTTTCAACTaGGATTCTGCTACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESQNIFN*DSATSV
Trigger: CACAGAGGTAGCAGAATCCCAGTTGAAAATGTTTTG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGACTGTGCAAACTGCTTaGACTCCTTTTCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQTVQTA*TPFQVS
Trigger: AGAAACTTGAAAAGGAGTTCAAGCAGTTTGCACAGT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAGAGTACTCAGAATTCTaGCAAGAAACATCACAAGTT +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESEYSEF*QETSQV
Trigger: AACTTGTGATGTTTCTTGTCAGAATTCTGAGTACTC...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATGATTGCTGCAGTGTaGGTCTTTAGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESMIAAV*VFSILK
Trigger: TTTCAAAATGCTAAAGACTCACACTGCAGCAATCAT...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTTAAAAGGACAGTCTTaGTCAGCTTCAGGACATACA +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNLKGQS*SASGHT
Trigger: TGTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATGGAAGCTTCCATTTTTaGCAAACAACTGTGCAAACT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNGSFHF*QTTVQT
Trigger: AGTTTGCACAGTTGTTTGGCAAAAATGGAAGCTTCC...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTTTCACTGTATCAACTaGTTCCATCAAAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNFHCIN*FHQRSQ
Trigger: CTGAGACCTTTGATGGAAGCAGTTGATACAGTGAAA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCACTCAATATTTAGAGTaGCCGAGACACTGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLTQYLE*PRHCAK
Trigger: CTTAGCGCAGTGTCTCGGGCACTCTAAATATTGAGT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTATAAAGATGGCTTTTaGAGACTTAAGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNYKDGF*RLKARS
Trigger: AGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCTATGCAGTACTTTCTaGTTTACTTCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQLCSTF*FTSAGR
Trigger: TCTTCCTGCTGAAGTAAAGCAGAAAGTACTGCATAG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGACTTGTCAATGTGACTaGCAAAAACCTGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQTCQCD*QKPGCL
Trigger: CAAACATCCAGGTTTTTGCCAGTCACATTGACAAGT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTTGAGATCAGCTTaGCCAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLSLRSA*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
3UTR CAA 72 bp TCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTaGTATATACACCTTCAGACCCATACAGATAGATGC +
Preference number: 4 (lower is better)
Translates to: SGLSRVIRTHLS*YIHLQTHTDRC
Trigger: GCATCTATCTGTATGGGTCTGAAGGTGTATATACAAACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTTTCCTTTCGAAACTaGCAGGATGCACTCAAATGC +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFSFRN*QDALKC
Trigger: GCATTTGAGTGCATCCTGTCAGTTTCGAAAGGAAAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCACAAGTTTTCCTCATaGTTCTGTAGATTGATGACT +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQHKFSS*FCRLMT
Trigger: AGTCATCAATCTACAGAATCATGAGGAAAACTTGTG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAAAACGGCTAATCTTTaGTCATTGTTTTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQKTANL*SLFSSR
Trigger: CCTGCTAGAAAACAATGATCAAAGATTAGCCGTTTT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR TCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTTAATCATCTGGGATaGTTGCTGCAGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFNHLG*LLQCES
Trigger: AGACTCACACTGCAGCAATCATCCCAGATGATTAAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGTTTCTGCTAGCTaGTGGATTTTACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TAYLIKMAFADLRPGLESIVSAS*WILLSF
Trigger: GAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTAT...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTAAACAACTGTGCAAACTaGTTGAACTCCTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLNNCAN*LNSFSS
Trigger: ACTTGAAAAGGAGTTCAAGCAGTTTGCACAGTTGTT...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATAACAACTGTGCAAACTaGTTGAACTCCTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNNNCAN*LNSFSS
Trigger: ACTTGAAAAGGAGTTCAAGCAGTTTGCACAGTTGTT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTAGCCTTGCAAAACTGTaGTTGCAAACTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSSLAKL*LQTAGE
Trigger: TTCACCAGCAGTTTGCAAGCACAGTTTTGCAAGGCT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGGTTTCTGCTAGCTGCTaGATTTTACTTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQVSASC*ILLSFC
Trigger: ACAGAAAGAAAGTAAAATCCAGCAGCTAGCAGAAAC...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATTACATCCAGGAGCATTaGTGCAATATACATATAAGT +
Preference number: 4 (lower is better)
Translates to: KDGFCRLKARSRINRPNNYIQEH*CNIHIS
Trigger: ACTTATATGTATATTGCAGCAATGCTCCTGGATGTA...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTTGCCAAACAACTGTaGAAACTGCTTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFAKQL*KLLELL
Trigger: AAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCTTTCACTGTATCAACTaGTTCCATCAAAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLFHCIN*FHQRSQ
Trigger: CTGAGACCTTTGATGGAAGCAGTTGATACAGTGAAA...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTACTCCTAAGCAAACCATaGCATGACATACTTTATATA +
Preference number: 4 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLLLSKP*HDILYI
Trigger: TATATAAAGTATGTCATGGCATGGTTTGCTTAGGAG...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTACTGGTACTCTATACTaGGCTCAAAGTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSTGTLY*AQSPRK
Trigger: TTTCCTTGGACTTTGAGCCCAGTATAGAGTACCAGT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCACTTGTCAATGTGACTaGCAAAAACCTGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLTCQCD*QKPGCL
Trigger: CAAACATCCAGGTTTTTGCCAGTCACATTGACAAGT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTTTGCCAAACAACTGTaGAAACTGCTTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSFAKQL*KLLELL
Trigger: AAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAA...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCGTTTCTGCTAGCTGCTaGATTTTACTTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLVSASC*ILLSFC
Trigger: ACAGAAAGAAAGTAAAATCCAGCAGCTAGCAGAAAC...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTTCTTCGCACAATTGTTaGGACAAAATACTGGGTATT +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSSSHNC*DKILGI
Trigger: AATACCCAGTATTTTGTCCCAACAATTGTGCGAAGA...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR GCA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTATAGTTTCTGCTAGCTaGTGGATTTTACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSIVSAS*WILLSF
Trigger: GAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTAT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS GCA 90 bp ATAAGCCATTGTGGGGCTCGGCGCGCGGGCTCCGCGAGGCCGGTCTaGAGGCGCGGCTGCTGCTCCTGGCTGCGGCCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: ISHCGARRAGSARPV*RRGCCSWLRPAAAA
Trigger: CGCCGCCGCCGCCGGCCGCAGCCAGGAGCAGCAGCCGCGCCTGCAGACCGGCCTCGCGGAGCCCGCGCGCCGAGCCCCACAATGGCTTAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488428.1
CDS TCA 90 bp AAGGCAGAGGGTAGGCTCTCAGGGGATGCTGCCCACTGTCTCTGCTaGGGAGAGGGCATGGGGAGGGCTGCTTGTACCAGAGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: KAEGRLSGDAAHCLC*GEGMGRAACTRDGK
Trigger: TTTCCCATCTCTGGTACAAGCAGCCCTCCCCATGCCCTCTCCTCAGCAGAGACAGTGGGCAGCATCCCCTGAGAGCCTACCCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGCGGCCCAGAATAACCTaGGCATTACATCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYERPRIT*ALHPGA
Trigger: TGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCG...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGCACCTGGGTCTGGACTaGTGGGCTAAAGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEHLGLD*WAKEML
Trigger: AAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTG...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS TCA 90 bp CAACCACAGAAGCCAGGCCCCTGTAATCTCAGGTACCTGGGAAGCTaGTGGGGAGGATCACTTGAGTCCAGGAGATTGAGTCTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPQKPGPCNLRYLGS*WGGSLESRRLSLAW
Trigger: CCAGGCTAGACTCAATCTCCTGGACTCAAGTGATCCTCCCCATCAGCTTCCCAGGTACCTGAGATTACAGGGGCCTGGCTTCTGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473385.1
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGGCCCATACTCATCCTaGCGTGCCCAGGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVGPYSS*RAQGSQ
Trigger: CTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS GCA 90 bp CTCTGGTCCAGAAGCATCAGGGTCACCCTCTGCCTGAATGGCCACTaGAACAGTGAGTCAAACTCTCCTCGCATGACCACAAAGTATAGG +
Preference number: 5 (lower is better)
Translates to: LWSRSIRVTLCLNGH*NSESNSPRMTTKYR
Trigger: CCTATACTTTGTGGTCATGCGAGGAGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTCTGGACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS CCA 90 bp GGCAGCGCCACACTTCCAGCTTCCCCTTTAACCACCTTCCCTAGCTaGAAGGAAGAGCAGCTGGGGTCACTTCATTTGAAAGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: GSATLPASPLTTFPS*KEEQLGSLHLKGIN
Trigger: ATTGATGCCTTTCAAATGAAGTGACCCCAGCTGCTCTTCCTTCCAGCTAGGGAAGGTGGTTAAAGGGGAAGCTGGAAGTGTGGCGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCTTCTGAATAAGCCATaGTGGGGCTCGGCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLLNKP*WGSARG
Trigger: CCCGCGCGCCGAGCCCCACAATGGCTTATTCAGAAG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261464.10
CDS-3UTR CAA 90 bp GCCCATGGCCCATACTCATCCTTGCGTGCCCAGGGGAGCCAGCGTGCATATGAGTTCTGTTCTAGGCTCTaGTGTAAGTCAGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: AHGPYSSLRAQGSQRAYEFCSRL*CKSEIC
Trigger: ACAGATTTCTGACTTACACAAGAGCCTAGAACAGAA...CTCATATGCACGCTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS TCA 90 bp GGCCAGGTCCCACAGTTGCTGGGAAACACCTACGACAGCACCAAGTaGGAGAGCAAATGCTTTTGGGGAAGGACCTCACAATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GQVPQLLGNTYDSTK*ESKCFWGRTSQLCL
Trigger: AAGACACAATTGTGAGGTCCTTCCCCAAAAGCATTTGCTCTCTCACTTGGTGCTGTCGTAGGTGTTTCCCAGCAACTGTGGGACCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS GCA 90 bp ATGTTCTTTTTGCCACTCTGGTCCAGAAGCATCAGGGTCACCCTCTaGCTGAATGGCCACTGCAACAGTGAGTCAAACTCTCCTCGCATG +
Preference number: 5 (lower is better)
Translates to: MFFLPLWSRSIRVTL*LNGHCNSESNSPRM
Trigger: CATGCGAGGAGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS CCA 90 bp TTGGGGTCAGGTTTGAAGGTCTCCATAATGTTCTTTTTGCCACTCTaGTCCAGAAGCATCAGGGTCACCCTCTGCCTGAATGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LGSGLKVSIMFFLPL*SRSIRVTLCLNGHC
Trigger: GCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAACATTATGGAGACCTTCAAACCTGACCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS TCA 90 bp AATGCTTCACCTTTAACCCACAGCCTGTCTCTGTCCTGGTCTGAGTaGTCTCCGTTAGATCATAAACCCCATGAGGCCAGGTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: NASPLTHSLSLSWSE*SPLDHKPHEARSHS
Trigger: ACTGTGGGACCTGGCCTCATGGGGTTTATGATCTAACGGAGATCACTCAGACCAGGACAGAGACAGGCTGTGGGTTAAAGGTGAAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATGGCCCATACTCATCCTaGCGTGCCCAGGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: KDGFCRLKARSRINRPNNGPYSS*RAQGSQ
Trigger: CTGGCTCCCCTGGGCACGCAAGGATGAGTATGGGCC...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS CCA 90 bp ATTTGTAGCGCTCTTCCAACCGCTCCACAAACTGGTACTCTATACTaGGCTCAAAGTCCAAGGAAATGGAGTTGCCGGAATTCTGGCGGA +
Preference number: 5 (lower is better)
Translates to: ICSALPTAPQTGTLY*AQSPRKWSCRNSGG
Trigger: TCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCAGTATAGAGTACCAGTTTGTGGAGCGGTTGGAAGAGCGCTACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS-3UTR CAA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATTCCAAGGAAATGGAGTaGCCGGAATTCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDSKEME*PEFWRM
Trigger: CATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGA...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTCCAAGGAAATGGAGTaGCCGGAATTCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVSKEME*PEFWRM
Trigger: CATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCGGCCCAGAATAACCTaGGCATTACATCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVRPRIT*ALHPGA
Trigger: TGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCGGCCCAGAATAACCTaGGCATTACATCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSRPRIT*ALHPGA
Trigger: TGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS TCA 90 bp TGGGCTCAAAGTCCAAGGAAATGGAGTTGCCGGAATTCTGGCGGATaGAACCACAGGGCATACCTTTATGCTCTTCTGAATAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: WAQSPRKWSCRNSGG*NHRAYLYALLNKPL
Trigger: CAATGGCTTATTCAGAAGAGCATAAAGGTATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000488428.1
ENST00000494355.1
CDS TCA 90 bp TGGGCTCAAAGTCCAAGGAAATGGAGTTGCCGGAATTCTGGCGGATaGAACCACAGGGCATACCTTTATGCTCTTCTGAATAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: WAQSPRKWSCRNSGG*NHRAYLYALLNKPF
Trigger: GAATGGCTTATTCAGAAGAGCATAAAGGTATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS CCA 90 bp AAACAGGTGGAGAGAACCCAGGCCCTGCTCTCCATAAGCCAGTTTTaGTCACTAAAGCTGTTCAATGGTCCATTTGAGCCTCACTTACTT +
Preference number: 5 (lower is better)
Translates to: KQVERTQALLSISQF*SLKLFNGPFEPHLL
Trigger: AAGTAAGTGAGGCTCAAATGGACCATTGAACAGCTTTAGTGACCAAAACTGGCTTATGGAGAGCAGGGCCTGGGTTCTCTCCACCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp CTGGGTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGAGTTTGAGATCAGCTaGGCCAACATGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: LGLDLWAKEMLPEFVRGDEFEIS*ANMAKL
Trigger: GAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACTC...ATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCACCTGGGTCTGGACTaGTGGGCTAAAGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVHLGLD*WAKEML
Trigger: AAGCATTTCTTTAGCCCACAAGTCCAGACCCAGGTG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS TCA 90 bp TTACAGTCATGGTTCTGTGGCCAAGTAAAACAACTCCAAAACCCATaGAAACAGTTGAGTGGCCACAGTTGCCACCTGGATGCTAGGACT +
Preference number: 5 (lower is better)
Translates to: LQSWFCGQVKQLQNP*KQLSGHSCHLDART
Trigger: AGTCCTAGCATCCAGGTGGCAACTGTGGCCACTCAACTGTTTTCATGGGTTTTGGAGTTGTTTTACTTGGCCACAGAACCATGACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494355.1
CDS GCA 90 bp ACATTCTTTTCTAAAACCAAACGCATGTGCTCCCGTAAGGCTGAATaGTCATGTTGCTGCAGGTTCCTCCGTTTATCCGTTACAGCACAG +
Preference number: 5 (lower is better)
Translates to: TFFSKTKRMCSRKAE*SCCCRFLRLSVTAQ
Trigger: CTGTGCTGTAACGGATAAACGGAGGAACCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTTAGAAAAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS CCA 90 bp GAAAGGCATCAATTCCCCTTCACTCACATTTCCCCTACACCTTGTTaGTTTGTCTCTCCTATCAATGCTTCACCTTTAACCCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: ERHQFPFTHISPTPC*FVSPINASPLTHSL
Trigger: CAGGCTGTGGGTTAAAGGTGAAGCATTGATAGGAGAGACAAACCAACAAGGTGTAGGGGAAATGTGAGTGAAGGGGAATTGATGCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCGAGTTTGAGATCAGCTaGGCCAACATGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVEFEIS*ANMAKL
Trigger: GAGTTTTGCCATGTTGGCCAAGCTGATCTCAAACTC...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS GCA 90 bp ACCTGTTCTTCTAATTGGACATTCTTTTCTAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGCTCATGTTGCTGCAGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: TCSSNWTFFSKTKRM*SRKAECSCCCRFLR
Trigger: ACGGAGGAACCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTTAGAAAAGAATGTCCAATTAGAAGAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCTTAAAAGGACAGTCTaGCTCAGCTTCAGGACATAC +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLKRTV*LSFRTY
Trigger: GTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAAG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTCTTAAAAGGACAGTCTaGCTCAGCTTCAGGACATAC +
Preference number: 5 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCLKRTV*LSFRTY
Trigger: GTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAAG...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTAAAAGGACAGTCTaGCTCAGCTTCAGGACATAC +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVLKRTV*LSFRTY
Trigger: GTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAAG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCTATTGGGGTCAGGTTaGAAGGTCTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLLGSG*KVSIMF
Trigger: GAACATTATGGAGACCTTCAAACCTGACCCCAATAG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACTTGAGGTCAGGAGTTaGAGATCAGCTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLEVRS*RSAWPT
Trigger: TGTTGGCCAAGCTGATCTCAAACTCCTGACCTCAAG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS GCA 90 bp ATCTGTTCTTCTAATTGGACATTCTTTTCTAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGCTCATGTTGCTGCAGGTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: ICSSNWTFFSKTKRM*SRKAECSCCCRFLR
Trigger: ACGGAGGAACCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTTAGAAAAGAATGTCCAATTAGAAGAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS CCA 90 bp AGGGTTGTCTTTCATGGCCTCACAGTGATTACACCTGTGTCTCTTTaGGGATTATATGTCACGTGGCTTACTCTCTACAGGAAGTTATTG +
Preference number: 5 (lower is better)
Translates to: RVVFHGLTVITPVSL*GLYVTWLTLYRKLL
Trigger: CAATAACTTCCTGTAGAGAGTAAGCCACGTGACATATAATCCCCAAAGAGACACAGGTGTAATCACTGTGAGGCCATGAAAGACAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCCAAAAACCTGGATGTTaGGGAGGAAGCTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSQKPGC*GGSFHF
Trigger: AAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTTG...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCAAAAACCTGGATGTTaGGGAGGAAGCTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVQKPGC*GGSFHF
Trigger: AAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTTG...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCTTGAGGTCAGGAGTTaGAGATCAGCTTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQLEVRS*RSAWPT
Trigger: TGTTGGCCAAGCTGATCTCAAACTCCTGACCTCAAG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTAGGACTCATCTCAGTTaGTATATACACCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCRTHLS*YIHLQT
Trigger: GGTCTGAAGGTGTATATACAAACTGAGATGAGTCCT...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTAGGGCTCAGGACAACTaGGCATTTTTGTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCRAQDN*AFLLLL
Trigger: TAACAACAACAAAAATGCCAAGTTGTCCTGAGCCCT...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCGTCCGAGGTGATGTGTaGAGCAACCGTGCCACAGTT +
Preference number: 5 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLVRGDV*SNRATV
Trigger: AACTGTGGCACGGTTGCTCAACACATCACCTCGGAC...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCATCTTCGCACAATTGTaGGGACAAAATACTGGGTAT +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVIFAQL*GQNTGY
Trigger: ATACCCAGTATTTTGTCCCAACAATTGTGCGAAGAT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCATAATCTTCGCACAATaGTTGGGACAAAATACTGGG +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSIIFAQ*LGQNTG
Trigger: CCCAGTATTTTGTCCCAACAATTGTGCGAAGATTAT...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCTTCTGTTCTAGGCTCTaGTGTAAGTCAGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVFCSRL*CKSEIC
Trigger: ACAGATTTCTGACTTACACAAGAGCCTAGAACAGAA...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp GGTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCAACTGTGCAAACTGCTaGAACTCCTTTTCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: GQYDNQMCSPPQFWPQEVNCANC*NSFSSF
Trigger: GAAACTTGAAAAGGAGTTCAAGCAGTTTGCACAGTT...GACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACTATTGGGGTCAGGTTaGAAGGTCTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLLGSG*KVSIMF
Trigger: GAACATTATGGAGACCTTCAAACCTGACCCCAATAG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTGACAACTTGGCATTTTaGTTGTTGTTAAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCDNLAF*LLLNSG
Trigger: GCCTGAGTTTAACAACAACAAAAATGCCAAGTTGTC...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS TCA 90 bp ACGCCTGGCCAACATTCTAGAGGTTTAAAAGCAGGCATATCTCAGTaGAAACCTTTGAATCACTGCAGTTATTGTGATGCTGGCAAGTTA +
Preference number: 5 (lower is better)
Translates to: TPGQHSRGLKAGISQ*KPLNHCSYCDAGKL
Trigger: TAACTTGCCAGCATCACAATAACTGCAGTGATTCAAAGGTTTTCACTGAGATATGCCTGCTTTTAAACCTCTAGAATGTTGGCCAGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp GTCTGGACTTGTGGGCTAAAGAAATGCTTCCTGAATTTGTCCGAGGTGATGTGTTTACATCCAGGAGCATaGCTGCAATATACATATAAG +
Preference number: 5 (lower is better)
Translates to: VWTCGLKKCFLNLSEVMCLHPGA*LQYTYK
Trigger: CTTATATGTATATTGCAGCAATGCTCCTGGATGTAA...ACACATCACCTCGGACAAATTCAGGAAGCATTTCTTTAGCCCACAAGTCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GTCAATATGATAATCAAATGTGCTCTCCTCCACAGTTCTGGCCCCAAGAAGTCCTTACATCCAGGAGCATaGCTGCAATATACATATAAG +
Preference number: 5 (lower is better)
Translates to: VNMIIKCALLHSSGPKKSLHPGA*LQYTYK
Trigger: CTTATATGTATATTGCAGCAATGCTCCTGGATGTAA...GGACTTCTTGGGGCCAGAACTGTGGAGGAGAGCACATTTGATTATCATATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAAGGACTCATCTCAGTTaGTATATACACCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESRTHLS*YIHLQT
Trigger: GGTCTGAAGGTGTATATACAAACTGAGATGAGTCCT...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTATATCTACAGGGCAGATaGGCACTGTGTTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLYLQGR*ALCLIL
Trigger: GAGAATTAAACACAGTGCCAATCTGCCCTGTAGATA...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGTATCTACAGGGCAGATaGGCACTGTGTTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQYLQGR*ALCLIL
Trigger: GAGAATTAAACACAGTGCCAATCTGCCCTGTAGATA...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAAACTGTGCAAACTGCTaGAACTCCTTTTCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESNCANC*NSFSSF
Trigger: GAAACTTGAAAAGGAGTTCAAGCAGTTTGCACAGTT...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGCAAAAACCTGGATGTTaGGGAGGAAGCTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQQKPGC*GGSFHF
Trigger: AAAATGGAAGCTTCCTCCCAAACATCCAGGTTTTTG...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTACTTGCAAAACTGTGCTaGCAAACTGCTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLLAKLC*QTAGEF
Trigger: AAATTCACCAGCAGTTTGCAAGCACAGTTTTGCAAG...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATAGTTCTTATGCAGCCTaGCAAAACTGTGCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: KDGFCRLKARSRINRPNNSSYAA*QNCACK
Trigger: TTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAACT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTCTTCCCAGAAGACACTCATATAAAGCATGCTTCTATAGGGTTAACTGTTCAGAGTTCTTATGCAGCCTaGCAAAACTGTGCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: LFPEDTHIKHASIGLTVQSSYAA*QNCACK
Trigger: TTTGCAAGCACAGTTTTGCAAGGCTGCATAAGAACT...CTGAACAGTTAACCCTATAGAAGCATGCTTTATATGAGTGTCTTCTGGGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCATTACATCCAGGAGCATaGCTGCAATATACATATAAG +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLHPGA*LQYTYK
Trigger: CTTATATGTATATTGCAGCAATGCTCCTGGATGTAA...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp AAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCAATAGGCCAAACAATATCTTCGCACAATTGTaGGGACAAAATACTGGGTAT +
Preference number: 5 (lower is better)
Translates to: KDGFCRLKARSRINRPNNIFAQL*GQNTGY
Trigger: ATACCCAGTATTTTGTCCCAACAATTGTGCGAAGAT...ATTGTTTGGCCTATTGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp CTGCTTTACTTCAGCAGGAAGAATGAAAATGCTTACCCCATTCACCAGTTCTTATTCTGTTCTAGGCTCTaGTGTAAGTCAGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: LLYFSRKNENAYPIHQFLFCSRL*CKSEIC
Trigger: ACAGATTTCTGACTTACACAAGAGCCTAGAACAGAA...TAAGAACTGGTGAATGGGGTAAGCATTTTCATTCTTCCTGCTGAAGTAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp ACAGCCTACCTTATAAAGATGGCTTTTGCAGACTTAAGGCCAGGTCTAGAATCACTATCCATCCTCACATaGATTTATTACTGTCACCAA +
Preference number: 5 (lower is better)
Translates to: TAYLIKMAFADLRPGLESLSILT*IYYCHQ
Trigger: TTGGTGACAGTAATAAATCAATGTGAGGATGGATAG...TGATTCTAGACCTGGCCTTAAGTCTGCAAAAGCCATCTTTATAAGGTAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS TCA 90 bp CATATGGTGATCACAGTTGGAATCCATCTCTTCTCCAAAATTGGTTaGTATTACTCCTCAACTCTCACCCAAACAGTCAACATTCATCAA +
Preference number: 5 (lower is better)
Translates to: HMVITVGIHLFSKIG*YYSSTLTQTVNIHQ
Trigger: TTGATGAATGTTGACTGTTTGGGTGAGAGTTGAGGAGTAATATCAACCAATTTTGGAGAAGAGATGGATTCCAACTGTGATCACCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 90 bp GAATCATATGGTGATCACAGTTGGAATCCATCTCTTCTCCAAAATTaGTTGATATTACTCCTCAACTCTCACCCAAACAGTCAACATTCA +
Preference number: 5 (lower is better)
Translates to: ESYGDHSWNPSLLQN*LILLLNSHPNSQHS
Trigger: TGAATGTTGACTGTTTGGGTGAGAGTTGAGGAGTAATATCAACCAATTTTGGAGAAGAGATGGATTCCAACTGTGATCACCATATGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS-3UTR CAA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTCTATTGGGGTCAGGTTaGAAGGTCTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSLLGSG*KVSIMF
Trigger: GAACATTATGGAGACCTTCAAACCTGACCCCAATAG...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCCTTGCAAAACTGTGCTaGCAAACTGCTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLLAKLC*QTAGEF
Trigger: AAATTCACCAGCAGTTTGCAAGCACAGTTTTGCAAG...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCATCTTCGCACAATTGTaGGGACAAAATACTGGGTAT +
Preference number: 5 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLIFAQL*GQNTGY
Trigger: ATACCCAGTATTTTGTCCCAACAATTGTGCGAAGAT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp GCATTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCATAATCTTCGCACAATaGTTGGGACAAAATACTGGG +
Preference number: 5 (lower is better)
Translates to: AFLLLLNSGLSRVIRTHLIIFAQ*LGQNTG
Trigger: CCCAGTATTTTGTCCCAACAATTGTGCGAAGATTAT...GAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTATAATCTTCGCACAATaGTTGGGACAAAATACTGGG +
Preference number: 5 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSIIFAQ*LGQNTG
Trigger: CCCAGTATTTTGTCCCAACAATTGTGCGAAGATTAT...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS-3UTR CAA 90 bp TTTTTGTTGTTGTTAAACTCAGGCTTATCAAGAGTCATAAGGACTCATCTCAGTGACAACTTGGCATTTTaGTTGTTGTTAAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: FLLLLNSGLSRVIRTHLSDNLAF*LLLNSG
Trigger: GCCTGAGTTTAACAACAACAAAAATGCCAAGTTGTC...ACTGAGATGAGTCCTTATGACTCTTGATAAGCCTGAGTTTAACAACAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261464.10
ENST00000336184.6
CDS GCA 72 bp AGTTGCAGGCCCTGCCCACTCACCTCAGGGACAGGATaGAGTGCTGGCAGAAGCGGTGCCCACATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SCRPCPLTSGTG*SAGRSGAHILS
Trigger: AGACAGGATGTGGGCACCGCTTCTGCCAGCACTGCATCCTGTCCCTGAGGTGAGTGGGCAGGGCCTGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494355.1
CDS TCA 72 bp GCGGATGAAACCACAGGGCATACCTTTATGCTCTTCTaGATAAGCCATTGTGGGGCTCGGCGCGCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ADETTGHTFMLF*ISHCGARRAGS
Trigger: GGAGCCCGCGCGCCGAGCCCCACAATGGCTTATTCAGAAGAGCATAAAGGTATGCCCTGTGGTTTCATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000488428.1
ENST00000494355.1
CDS CCA 72 bp AACCACAGAAGCCAGGCCCCTGTAATCTCAGGTACCTaGGAAGCTGATGGGGAGGATCACTTGAGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: NHRSQAPVISGT*EADGEDHLSPG
Trigger: TCCTGGACTCAAGTGATCCTCCCCATCAGCTTCCCAGGTACCTGAGATTACAGGGGCCTGGCTTCTGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473385.1
CDS TCA 72 bp AAGCCAGGCCCCTGTAATCTCAGGTACCTGGGAAGCTaGTGGGGAGGATCACTTGAGTCCAGGAGATTGAGT +
Preference number: 6 (lower is better)
Translates to: KPGPCNLRYLGS*WGGSLESRRLS
Trigger: ACTCAATCTCCTGGACTCAAGTGATCCTCCCCATCAGCTTCCCAGGTACCTGAGATTACAGGGGCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473385.1
CDS GCA 72 bp AGAAGCATCAGGGTCACCCTCTGCCTGAATGGCCACTaGAACAGTGAGTCAAACTCTCCTCGCATGACCACA +
Preference number: 6 (lower is better)
Translates to: RSIRVTLCLNGH*NSESNSPRMTT
Trigger: TGTGGTCATGCGAGGAGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS TCA 72 bp CCTTTAACCCACAGCCTGTCTCTGTCCTGGTCTGAGTaGTCTCCGTTAGATCATAAACCCCATGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PLTHSLSLSWSE*SPLDHKPHEAR
Trigger: CCTGGCCTCATGGGGTTTATGATCTAACGGAGATCACTCAGACCAGGACAGAGACAGGCTGTGGGTTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp CTGAAGGTGATCCTGCAACAGATAACAACAGGCCAGTaGGACCTGCTGACCAGGGTGGTAGGAAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LKVILQQITTGQ*DLLTRVVGKKS
Trigger: TGACTTCTTTCCTACCACCCTGGTCAGCAGGTCCCACTGGCCTGTTGTTATCTGTTGCAGGATCACCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp CAGGCCAGTGGGACCTGGTACCGGCCCAGAATAACCTaGGCATTACATCCAGGAGCATTGCTGCAATATACA +
Preference number: 6 (lower is better)
Translates to: QASGTWYRPRIT*ALHPGALLQYT
Trigger: TGTATATTGCAGCAATGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCGGTACCAGGTCCCACTGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488428.1
CDS TCA 72 bp CCACAGTTGCTGGGAAACACCTACGACAGCACCAAGTaGGAGAGCAAATGCTTTTGGGGAAGGACCTCACAA +
Preference number: 6 (lower is better)
Translates to: PQLLGNTYDSTK*ESKCFWGRTSQ
Trigger: TTGTGAGGTCCTTCCCCAAAAGCATTTGCTCTCTCACTTGGTGCTGTCGTAGGTGTTTCCCAGCAACTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS GCA 72 bp AAACGCATGTGCTCCCGTAAGGCTGAATGCTCATGTTaGTGCAGGTTCCTCCGTTTATCCGTTACAGCACAG +
Preference number: 6 (lower is better)
Translates to: KRMCSRKAECSC*CRFLRLSVTAQ
Trigger: CTGTGCTGTAACGGATAAACGGAGGAACCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS GCA 72 bp TTAGATCATAAACCCCATGAGGCCAGGTCCCACAGTTaGTGGGAAACACCTACGACAGCACCAAGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: LDHKPHEARSHS*WETPTTAPSER
Trigger: TCTCTCACTTGGTGCTGTCGTAGGTGTTTCCCAGCAACTGTGGGACCTGGCCTCATGGGGTTTATGATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 90 bp CTGCTGCTATTGGGGTCAGGTTTGAAGGTCTCCATAATGTTCTTTTaGCCACTCTGGTCCAGAAGCATCAGGGTCACCCTCTGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: LLLLGSGLKVSIMFF*PLWSRSIRVTLCLN
Trigger: ATTCAGGCAGAGGGTGACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAACATTATGGAGACCTTCAAACCTGACCCCAATAGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS CAA 90 bp GCTGGGAAACACCTACGACAGCACCAAGTGAGAGAGCAAATGCTTTaGGGGAAGGACCTCACAATTGTGTCTTTCTGTAGTCATGCCCTG +
Preference number: 6 (lower is better)
Translates to: AGKHLRQHQVREQML*GKDLTIVSFCSHAL
Trigger: CAGGGCATGACTACAGAAAGACACAATTGTGAGGTCCTTCCCCAAAAGCATTTGCTCTCTCACTTGGTGCTGTCGTAGGTGTTTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp GGCTCAAAGTCCAAGGAAATGGAGTTGCCGGAATTCTaGCGGATGAAACCACAGGGCATACCTTTATGCTCT +
Preference number: 6 (lower is better)
Translates to: GSKSKEMELPEF*RMKPQGIPLCS
Trigger: AGAGCATAAAGGTATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS CCA 72 bp GCTCTTCCAACCGCTCCACAAACTGGTACTCTATACTaGGCTCAAAGTCCAAGGAAATGGAGTTGCCGGAAT +
Preference number: 6 (lower is better)
Translates to: ALPTAPQTGTLY*AQSPRKWSCRN
Trigger: ATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCAGTATAGAGTACCAGTTTGTGGAGCGGTTGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS CCA 72 bp ACACTTCCAGCTTCCCCTTTAACCACCTTCCCTAGCTaGAAGGAAGAGCAGCTGGGGTCACTTCATTTGAAA +
Preference number: 6 (lower is better)
Translates to: TLPASPLTTFPS*KEEQLGSLHLK
Trigger: TTTCAAATGAAGTGACCCCAGCTGCTCTTCCTTCCAGCTAGGGAAGGTGGTTAAAGGGGAAGCTGGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp GAGAGAACCCAGGCCCTGCTCTCCATAAGCCAGTTTTaGTCACTAAAGCTGTTCAATGGTCCATTTGAGCCT +
Preference number: 6 (lower is better)
Translates to: ERTQALLSISQF*SLKLFNGPFEP
Trigger: AGGCTCAAATGGACCATTGAACAGCTTTAGTGACCAAAACTGGCTTATGGAGAGCAGGGCCTGGGTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp TTGGGGTCAGGTTTGAAGGTCTCCATAATGTTCTTTTaGCCACTCTGGTCCAGAAGCATCAGGGTCACCCTC +
Preference number: 6 (lower is better)
Translates to: LGSGLKVSIMFF*PLWSRSIRVTL
Trigger: GAGGGTGACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAACATTATGGAGACCTTCAAACCTGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS GCA 72 bp TCTAAAACCAAACGCATGTGCTCCCGTAAGGCTGAATaGTCATGTTGCTGCAGGTTCCTCCGTTTATCCGTT +
Preference number: 6 (lower is better)
Translates to: SKTKRMCSRKAE*SCCCRFLRLSV
Trigger: AACGGATAAACGGAGGAACCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS GCA 72 bp TTCCCCTACACCTTGTTGGTTTGTCTCTCCTATCAATaGTTCACCTTTAACCCACAGCCTGTCTCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: FPYTLLVCLSYQ*FTFNPQPVSVL
Trigger: CAGGACAGAGACAGGCTGTGGGTTAAAGGTGAAGCATTGATAGGAGAGACAAACCAACAAGGTGTAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp GGTTTGAAGGTCTCCATAATGTTCTTTTTGCCACTCTaGTCCAGAAGCATCAGGGTCACCCTCTGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: GLKVSIMFFLPL*SRSIRVTLCLN
Trigger: ATTCAGGCAGAGGGTGACCCTGATGCTTCTGGACCAGAGTGGCAAAAAGAACATTATGGAGACCTTCAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000473385.1
CDS CCA 72 bp AGGACCTCACAATTGTGTCTTTCTGTAGTCATGCCCTaGGTCCCACACAGTTCCCCCAAAATGGCATATTCT +
Preference number: 6 (lower is better)
Translates to: RTSQLCLSVVMP*VPHSSPKMAYS
Trigger: AGAATATGCCATTTTGGGGGAACTGTGTGGGACCCAGGGCATGACTACAGAAAGACACAATTGTGAGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp TACTCTATACTGGGCTCAAAGTCCAAGGAAATGGAGTaGCCGGAATTCTGGCGGATGAAACCACAGGGCATA +
Preference number: 6 (lower is better)
Translates to: YSILGSKSKEME*PEFWRMKPQGI
Trigger: TATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCAGTATAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS CAA 72 bp CGTTACAGCACAGCCATAGTGCTTAAAAGGACAGTCTaGCTCAGCTTCAGGACATACAGCCAGGTGTTCATC +
Preference number: 6 (lower is better)
Translates to: RYSTAIVLKRTV*LSFRTYSQVFI
Trigger: GATGAACACCTGGCTGTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAAGCACTATGGCTGTGCTGTAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS CAA 90 bp ACAAACTGGTACTCTATACTGGGCTCAAAGTCCAAGGAAATGGAGTaGCCGGAATTCTGGCGGATGAAACCACAGGGCATACCTTTATGC +
Preference number: 6 (lower is better)
Translates to: TNWYSILGSKSKEME*PEFWRMKPQGIPLC
Trigger: GCATAAAGGTATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACTTTGAGCCCAGTATAGAGTACCAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS CAA 90 bp CCGTTTATCCGTTACAGCACAGCCATAGTGCTTAAAAGGACAGTCTaGCTCAGCTTCAGGACATACAGCCAGGTGTTCATCTACCTCAGT +
Preference number: 6 (lower is better)
Translates to: PFIRYSTAIVLKRTV*LSFRTYSQVFIYLS
Trigger: ACTGAGGTAGATGAACACCTGGCTGTATGTCCTGAAGCTGAGCAAGACTGTCCTTTTAAGCACTATGGCTGTGCTGTAACGGATAAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS TCA 72 bp AGTCCAAGGAAATGGAGTTGCCGGAATTCTGGCGGATaGAACCACAGGGCATACCTTTATGCTCTTCTGAAT +
Preference number: 6 (lower is better)
Translates to: SPRKWSCRNSGG*NHRAYLYALLN
Trigger: ATTCAGAAGAGCATAAAGGTATGCCCTGTGGTTTCATCCGCCAGAATTCCGGCAACTCCATTTCCTTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
ENST00000494355.1
CDS CAA 72 bp CACCTACGACAGCACCAAGTGAGAGAGCAAATGCTTTaGGGGAAGGACCTCACAATTGTGTCTTTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: HLRQHQVREQML*GKDLTIVSFCS
Trigger: ACTACAGAAAGACACAATTGTGAGGTCCTTCCCCAAAAGCATTTGCTCTCTCACTTGGTGCTGTCGTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS TCA 72 bp GCGGATGAAACCACAGGGCATACCTTTATGCTCTTCTaGATAAGCCATTCCGCTTCAGAACCGTTAGTATCT +
Preference number: 6 (lower is better)
Translates to: ADETTGHTFMLF*ISHSASEPLVS
Trigger: AGATACTAACGGTTCTGAAGCGGAATGGCTTATTCAGAAGAGCATAAAGGTATGCCCTGTGGTTTCATCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336184.6
ENST00000462410.5
CDS TCA 72 bp CAGCCTCTCAGCAATTCCCTAGAAGTTAGAGAAGCCTaGGTCATGTTCACTTGCAGTGTGATCAAACTTGAC +
Preference number: 6 (lower is better)
Translates to: QPLSNSLEVREA*VMFTCSVIKLD
Trigger: GTCAAGTTTGATCACACTGCAAGTGAACATGACTCAGGCTTCTCTAACTTCTAGGGAATTGCTGAGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp TTTCATGGCCTCACAGTGATTACACCTGTGTCTCTTTaGGGATTATATGTCACGTGGCTTACTCTCTACAGG +
Preference number: 6 (lower is better)
Translates to: FHGLTVITPVSL*GLYVTWLTLYR
Trigger: CCTGTAGAGAGTAAGCCACGTGACATATAATCCCCAAAGAGACACAGGTGTAATCACTGTGAGGCCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp CTTTCATGGCCTCACAGTGATTACACCTGTGTCTCTTaGGGGATTATATGTCACGTGGCTTACTCTCTACAG +
Preference number: 6 (lower is better)
Translates to: LSWPHSDYTCVS*GIICHVAYSLQ
Trigger: CTGTAGAGAGTAAGCCACGTGACATATAATCCCCAAAGAGACACAGGTGTAATCACTGTGAGGCCATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS TCA 72 bp CATTCCTGGAAAAATGGCAAAAGCAGATATCGTTCATaGGTAATACCAACCTGGTACCGGCCCAGAATAACC +
Preference number: 6 (lower is better)
Translates to: HSWKNGKSRYRS*VIPTWYRPRIT
Trigger: GGTTATTCTGGGCCGGTACCAGGTTGGTATTACTCATGAACGATATCTGCTTTTGCCATTTTTCCAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS GCA 72 bp TCTAATTGGACATTCTTTTCTAAAACCAAACGCATGTaGTCCCGTAAGGCTGAATGCTCATGTTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SNWTFFSKTKRM*SRKAECSCCCR
Trigger: CCTGCAGCAACATGAGCATTCAGCCTTACGGGAGCACATGCGTTTGGTTTTAGAAAAGAATGTCCAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
CDS CCA 72 bp CAATTCCCCTTCACTCACATTTCCCCTACACCTTGTTaGTTTGTCTCTCCTATCAATGCTTCACCTTTAACC +
Preference number: 6 (lower is better)
Translates to: QFPFTHISPTPC*FVSPINASPLT
Trigger: GGTTAAAGGTGAAGCATTGATAGGAGAGACAAACCAACAAGGTGTAGGGGAAATGTGAGTGAAGGGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp GCATCAATTCCCCTTCACTCACATTTCCCCTACACCTaGTTGGTTTGTCTCTCCTATCAATGCTTCACCTTT +
Preference number: 6 (lower is better)
Translates to: ASIPLHSHFPYT*LVCLSYQCFTF
Trigger: AAAGGTGAAGCATTGATAGGAGAGACAAACCAACAAGGTGTAGGGGAAATGTGAGTGAAGGGGAATTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 90 bp TCCTGGTACCGGCCCAGAATAACCTTGGCATTACATCCAGGAGCATaGCTGCAATATACATATAAGTTGAGGACTTCTCTTTTGCAACAA +
Preference number: 6 (lower is better)
Translates to: SWYRPRITLALHPGA*LQYTYKLRTSLLQQ
Trigger: TTGTTGCAAAAGAGAAGTCCTCAACTTATATGTATATTGCAGCAATGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCGGTACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
CDS CAA 90 bp ACCTGGTACCGGCCCAGAATAACCTTGGCATTACATCCAGGAGCATaGCTGCAATATACATATAAGTTGAGGACTTCTCTTTTGCAACAA +
Preference number: 6 (lower is better)
Translates to: TWYRPRITLALHPGA*LQYTYKLRTSLLQQ
Trigger: TTGTTGCAAAAGAGAAGTCCTCAACTTATATGTATATTGCAGCAATGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCGGTACCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462410.5
ENST00000488428.1
CDS CAA 90 bp AAGGGTTGTCTTTCATGGCCTCACAGTGATTACACCTGTGTCTCTTaGGGGATTATATGTCACGTGGCTTACTCTCTACAGGAAGTTATT +
Preference number: 6 (lower is better)
Translates to: KGCLSWPHSDYTCVS*GIICHVAYSLQEVI
Trigger: AATAACTTCCTGTAGAGAGTAAGCCACGTGACATATAATCCCCAAAGAGACACAGGTGTAATCACTGTGAGGCCATGAAAGACAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS GCA 72 bp GGAGCCACACCTATTCCTTCACATATTGTCTATAGCTaGTTTGCCTCTAAAATGGGAGAGCTGAGTAATTGT +
Preference number: 6 (lower is better)
Translates to: GATPIPSHIVYS*FASKMGELSNC
Trigger: ACAATTACTCAGCTCTCCCATTTTAGAGGCAAAGCAGCTATAGACAATATGTGAAGGAATAGGTGTGGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CAA 72 bp CGGCCCAGAATAACCTTGGCATTACATCCAGGAGCATaGCTGCAATATACATATAAGTTGAGGACTTCTCTT +
Preference number: 6 (lower is better)
Translates to: RPRITLALHPGA*LQYTYKLRTSL
Trigger: AAGAGAAGTCCTCAACTTATATGTATATTGCAGCAATGCTCCTGGATGTAATGCCAAGGTTATTCTGGGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261464.10
ENST00000336184.6
ENST00000367004.3
ENST00000462410.5
ENST00000488428.1
CDS CAA 72 bp TTTATTGGAGAGGAGCCACACCTATTCCTTCACATATaGTCTATAGCTGCTTTGCCTCTAAAATGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: FIGEEPHLFLHI*SIAALPLKWES
Trigger: GCTCTCCCATTTTAGAGGCAAAGCAGCTATAGACAATATGTGAAGGAATAGGTGTGGCTCCTCTCCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS CCA 72 bp ATTACACCTGTGTCTCTTTGGGGATTATATGTCACGTaGCTTACTCTCTACAGGAAGTTATTGCCTAATTCC +
Preference number: 6 (lower is better)
Translates to: ITPVSLWGLYVT*LTLYRKLLPNS
Trigger: GGAATTAGGCAATAACTTCCTGTAGAGAGTAAGCCACGTGACATATAATCCCCAAAGAGACACAGGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462410.5
CDS TCA 72 bp CCTACTATGATGGTTCACCTAATGACAGACATCACCTaGCTGAATTTACTGAACTGGTTCTCTTCATTCATT +
Preference number: 6 (lower is better)
Translates to: PTMMVHLMTDIT*LNLLNWFSSFI
Trigger: AATGAATGAAGAGAACCAGTTCAGTAAATTCAGTCAGGTGATGTCTGTCATTAGGTGAACCATCATAGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473385.1
CDS TCA 72 bp ATCTCAGTGAAAACCTTTGAATCACTGCAGTTATTGTaGTGCTGGCAAGTTAACAAAATGTTAGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: ISVKTFESLQLL*CWQVNKMLENL
Trigger: CAAGTTCTCTAACATTTTGTTAACTTGCCAGCATCACAATAACTGCAGTGATTCAAAGGTTTTCACTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462410.5