RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF3IP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000009790

Ensembl transcript IDs: ENST00000367023.5, ENST00000367024.5, ENST00000367025.8, ENST00000367026.7, ENST00000400959.7, ENST00000460314.1, ENST00000467830.1, ENST00000468672.5, ENST00000471368.1, ENST00000474496.5, ENST00000476050.5, ENST00000477431.1, ENST00000478359.5, ENST00000479796.5, ENST00000487271.5, ENST00000488702.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAGGAACACTGCCAGTGCTGCAGCAATCACCACCATCAGCACTaGGAGCCATCGCCCACATTGCCTTCTGGGAGGCAGCTGCTGGCT +
Preference number: 1 (lower is better)
Translates to: GQEHCQCCSNHHHQH*EPSPTLPSGRQLLA
Trigger: AGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 90 bp TCAGATCATCAGGTTGTCTTTATTGGCCAGGAACACTGCCAGTGCTaGAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTG +
Preference number: 1 (lower is better)
Translates to: SDHQVVFIGQEHCQC*SNHHHQHWEPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 90 bp TATTCAGATCATCAGGTTGTCTTTATTGGCCAGGAACACTGCCAGTaGTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACA +
Preference number: 1 (lower is better)
Translates to: YSDHQVVFIGQEHCQ*CSNHHHQHWEPSPT
Trigger: TGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 90 bp ACAAATTATTCAGATCATCAGGTTGTCTTTATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCACCACCATCAGCACTGGGAGCCATCG +
Preference number: 1 (lower is better)
Translates to: TNYSDHQVVFIGQEH*QCCSNHHHQHWEPS
Trigger: CGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR CCA 90 bp CAAGGCAGTTGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTGCTGCAGCAATCACCACCATCAGCA +
Preference number: 1 (lower is better)
Translates to: QGSCHKLFRSSGCLY*PGTLPVLQQSPPSA
Trigger: TGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTATTC +
Preference number: 1 (lower is better)
Translates to: TQAVMYPNLLSFSLS*LLLIFTQGSCHKLF
Trigger: GAATAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471368.1
ENST00000477431.1
3UTR TCA 90 bp CCCTTTTTCACAGTTTATATACCTCAAGATAGAAGGCTAACTAGTTaGAGTGTCCTCAGAGCCAATGATCAGTCCTTAAAAAGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: PFFTVYIPQDRRLTS*SVLRANDQSLKSSH
Trigger: GTGGGAGCTTTTTAAGGACTGATCATTGGCTCTGAGGACACTTCAACTAGTTAGCCTTCTATCTTGAGGTATATAAACTGTGAAAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
3UTR-3UTR GCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 2 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLSKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
3UTR-3UTR CCA 90 bp ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATACAGACTCCCAGAACTaGCTGGGACTCCAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: THPGLNRLPELAGTPGGHTDSQN*LGLQEV
Trigger: GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGT...ATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
3UTR-3UTR TCA 90 bp ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATAGAAGGCTAACTAGTTaGAGTGTCCTCAGAGCCAAT +
Preference number: 2 (lower is better)
Translates to: THPGLNRLPELAGTPGGHRRLTS*SVLRAN
Trigger: ATTGGCTCTGAGGACACTTCAACTAGTTAGCCTTCT...ATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
3UTR CAA 90 bp CCAAGGCAGTTGTCACAAATTATTCAGATCATCAGGTTGTCTTTATaGGCCAGGAACACTGCCAGTGCTGCAGCAATCACCACCATCAGC +
Preference number: 2 (lower is better)
Translates to: PRQLSQIIQIIRLSL*ARNTASAAAITTIS
Trigger: GCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAACAGGAACACTGCCAGTaGTGCAGCAATCACCACCAT +
Preference number: 2 (lower is better)
Translates to: EFFAELLASDFHPRQLSQQEHCQ*CSNHHH
Trigger: ATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTG...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR CAA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTaGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: EFFAELLASDFHPRQ*SQIIQIIRLSLLAR
Trigger: CCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR CAA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTATTCAGA +
Preference number: 2 (lower is better)
Translates to: QAVMYPNLLSFSLSC*LLIFTQGSCHKLFR
Trigger: TCTGAATAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471368.1
ENST00000477431.1
3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTATT +
Preference number: 2 (lower is better)
Translates to: NPSCNVPKPSEFFAE*LASDFHPRQLSQII
Trigger: AATAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471368.1
ENST00000477431.1
3UTR-3UTR GCA 90 bp GGCAGTTGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTGGCCAGGAACAAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 2 (lower is better)
Translates to: GSCHKLFRSSGCLYWPGTSFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...TGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 72 bp GGGAGCCATCGCCCACATTGCCTTCTGGGAGGCAGCTaGTGGCTCTGGTTCAGCTCTTCTCGACAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: GSHRPHCLLGGS*WLWFSSSRQCC
Trigger: GCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR CCA 72 bp AGCCATCGCCCACATTGCCTTCTGGGAGGCAGCTGCTaGCTCTGGTTCAGCTCTTCTCGACAGTGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SHRPHCLLGGSC*LWFSSSRQCCS
Trigger: GCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR GCA 72 bp CAGGTTGTCTTTATTGGCCAGGAACACTGCCAGTGCTaGAGCAATCACCACCATCAGCACTGGGAGCCATCG +
Preference number: 3 (lower is better)
Translates to: QVVFIGQEHCQC*SNHHHQHWEPS
Trigger: CGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR-3UTR CAA 90 bp CTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTTCTGGGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: LQQSPPSALGAIAHIAFWEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...CCAGAAGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR-3UTR CAA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTTTGCTGACCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 3 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMFADLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGGTCAGCAAA...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
3UTR GCA 72 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAC +
Preference number: 3 (lower is better)
Translates to: VMYPNLLSFSLS*LLLIFTQGSCH
Trigger: GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
3UTR CCA 72 bp TGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTGCTGCAGCAATCACCA +
Preference number: 3 (lower is better)
Translates to: CHKLFRSSGCLY*PGTLPVLQQSP
Trigger: TGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
3UTR-3UTR CAA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: SEILSQLENPSCNVPKPSEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCGCCTGGAGGGCCCTTaGTCCCTGGCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQERLEGP*SLAWGC
Trigger: GCATCCCCAGGCCAGGGAGCAAGGGCCCTCCAGGCG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCCTGTCCTGGCCGCCTaGAGGGCCCTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEPVLAA*RALAPW
Trigger: CCAGGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCGCCTGGAGGGCCCTTaGTCCCTGGCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMRLEGP*SLAWGC
Trigger: GCATCCCCAGGCCAGGGAGCAAGGGCCCTCCAGGCG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGCCTGTCACCTGTCCTaGCCGCCTGGAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQACHLS*PPGGPL
Trigger: CAAGGGCCCTCCAGGCGGCCAGGACAGGTGACAGGC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS-3UTR TCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAATCCCTGCAGATGCCTaGGGGAGGAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGIPADA*GRRMLG
Trigger: GCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGAT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTAAGGCCCCCAGCCTGTaGGGAGAGGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PTHPGLNRLPELAGTPGGKAPSL*GEVVRQ
Trigger: CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTT...ACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEPPGGK*SHWDGS
Trigger: GCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGPPGGK*SHWDGS
Trigger: GCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCCTTGCTCCCTGGCCTaGGGATGCTGCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQPCSLA*GCCALP
Trigger: GGGCAAAGCGCAGCATCCCCAGGCCAGGGAGCAAGG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTGATGGGAGTGTCCTGTaGAGGAAGGCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTHPGLNRLPELAGTPGGDGSVL*RKAPSL
Trigger: CAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATC...ACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGATGGGAGTGTCCTGTaGAGGAAGGCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQDGSVL*RKAPSL
Trigger: CAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACCCTGCAGTTTGGACTaGAGCACGTGGAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGPCSLD*STWSWL
Trigger: GAGCCAACTCCACGTGCTTCAGTCCAAACTGCAGGG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR TCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGPGSSS*RTAAVE
Trigger: CTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGTTTCTCTGCCTCTGACCTTATCCCTGCAGATGCCTaGGGGAGGAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PCNCCTLVTRVSFSASDLIPADA*GRRMLG
Trigger: GCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGAT...AAGGTCAGAGGCAGAGAAACTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: PTHPGLNRLPELAGTPGGFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...ACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGGGGATGCTGCGCTTTaGCCTTCTCCTCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEGDAAL*PSPLAP
Trigger: TGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATCCCC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCGGGGATGCTGCGCTTTaGCCTTCTCCTCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVGDAAL*PSPLAP
Trigger: TGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATCCCC...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGCTGCCTCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEAASCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGAGGCAGC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS-3UTR CCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAACAGACTCCCAGAACTaGCTGGGACTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGTDSQN*LGLQEV
Trigger: GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGGAGGGCCTGGGGTCTaGGCTGATCATGATGACCTC +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQGGPGV*ADHDDL
Trigger: GAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPAGKWSH*DGSGGF
Trigger: AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCC...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp CCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: PTHPGLNRLPELAGTPGGSVFPT*RQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCT...ACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLSCSLC*ILSVFP
Trigger: GGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCT...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGCCTGTCCTGGCCGCCTaGAGGGCCCTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGEPVLAA*RALAPW
Trigger: CCAGGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGG...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR TCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEVWVAS*WECPVE
Trigger: CTCCACAGGACACTCCCATCAAGAAGCCACCCAAAC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGCTGTCAGAGGCCTaGATCAGAGTGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGELSEA*IRVDSR
Trigger: CCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTC...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCCCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPAFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACTTTCACGGATCTCTTaGCTGCGCTCACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLSRIS*LRSHLA
Trigger: GGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVRALWS*SLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCG...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQELLKNC*SRALWS
Trigger: GCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQELLLKN*CSRALW
Trigger: CCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLLLKN*CSRALW
Trigger: CCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAACAGATCCCTGCAGATaGCTGAGGGAGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGTDPCR*LREEDA
Trigger: AGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGGTCAGACAGATCCCTaGAGATGCCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQGQTDP*RCLREE
Trigger: CTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGGGTCAGACAGATCCCTaGAGATGCCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMGQTDP*RCLREE
Trigger: CTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACC...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCCTGGTGCCTGTCACCTaGTCTCTGGGAGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLLVPVT*SLGEEI
Trigger: GATTTCTTCTCCCAGAGAGCAGGTGACAGGCACCAG...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQESCSLC*ILSVFP
Trigger: GGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGACAGTCACCTGTCCTaGCCGCCTGGAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLDSHLS*PPGGPL
Trigger: CAAGGGCCCTCCAGGCGGCCAGGACAGGTGACTGTC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR TCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGAAGGCCCCCAGCCTGTaGGGAGAGGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLKAPSL*GEVVRQ
Trigger: CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAATCTGCAGTTTGGACTaGAGCACGTGGAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGICSLD*STWSWL
Trigger: GAGCCAACTCCACGTGCTTCAGTCCAAACTGCAGAT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQESKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCCTCCAAGCACCTGTTaGGCTTGGCTTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQPPSTC*AWLPVP
Trigger: AGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQHGSLA*AHTWPH
Trigger: ATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQRALWS*SLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQLLKNC*SRALWS
Trigger: GCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCTGGCCTGGGGATGCTaGGCTTTGCCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLAWGC*ALPFSS
Trigger: AGAGGAGAAGGGCAAAGCGCAGCATCCCCAGGCCAG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCGCCTGGAGGGCCCTTaGTCCCTGGCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRRLEGP*SLAWGC
Trigger: GCATCCCCAGGCCAGGGAGCAAGGGCCCTCCAGGCG...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLGKWSH*DGSGGF
Trigger: AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGCCTTGCTCCCTGGCCTaGGGATGCTGCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGEPCSLA*GCCALP
Trigger: GGGCAAAGCGCAGCATCCCCAGGCCAGGGAGCAAGG...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCCTGTCCTGGCCGCCTaGAGGGCCCTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHPVLAA*RALAPW
Trigger: CCAGGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGTCCCTGGTGCCGGTCTaGGGTCTTCAGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLSLVPV*GLQLLL
Trigger: AAGCAGGAGCTGAAGACCTCAGACCGGCACCAGGGA...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR TCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCCTTCTGCCTTTGTCTaGGTACCACGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQPSAFV*VPRWCL
Trigger: CAAACACCACCGTGGTACTCAGACAAAGGCAGAAGG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCTGCTCTAGTAGAGGTTaGTTAGGGCTTCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLCSSRG*LGLQPI
Trigger: GATTGGCTGAAGCCCTAAGCAACCTCTACTAGAGCA...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATCCCCTGCCTCTGATCTaGTCTCCAGAAACACCACCA +
Preference number: 4 (lower is better)
Translates to: THPGLNRLPELAGTPGGHPLPLI*SPETPP
Trigger: TGGTGGTGTTTCTGGAGAGCAGATCAGAGGCAGGGG...ATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp CTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCTTAAGCTGTCCCTGGTaGCGGTCTGAGGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNRLPELAGTPGGHVVHPLSCPW*RSEVFS
Trigger: GCTGAAGACCTCAGACCGGCACCAGGGACAGCTTAA...GGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQRSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCTGGCCTGGGGATGCTaGGCTTTGCCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLLAWGC*ALPFSS
Trigger: AGAGGAGAAGGGCAAAGCGCAGCATCCCCAGGCCAG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVSAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMLLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQLLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR CCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAAGCACCTGTTGCGCTTaGCTTCCAGTTCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGSTCCA*LPVPGI
Trigger: TATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLSVFPT*RQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTCCTGTCCTGGCCGCCTaGAGGGCCCTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAPVLAA*RALAPW
Trigger: CCAGGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGG...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCAGAAGGCTAACTAGTTaGAGTGTCCTCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLRRLTS*SVLRAN
Trigger: ATTGGCTCTGAGGACACTTCAACTAGTTAGCCTTCT...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR TCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPGSSS*RTAAVE
Trigger: CTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGAGCTGTCAGAGGCCTaGATCAGAGTGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLELSEA*IRVDSR
Trigger: CCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGATCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGSSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCCCAGACACAGATTGTaGCATCCAAACCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQPRHRL*HPNPQA
Trigger: TGCTTGTGGGTTTGGATGGCACAATCTGTGTCTGGG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCCCAGACACAGATTGTaGCATCCAAACCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMPRHRL*HPNPQA
Trigger: TGCTTGTGGGTTTGGATGGCACAATCTGTGTCTGGG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLHGSLA*AHTWPH
Trigger: ATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCTTTCACGGATCTCTTaGCTGCGCTCACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLSRIS*LRSHLA
Trigger: GGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCGCCTGGAGGGCCCTTaGTCCCTGGCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLRLEGP*SLAWGC
Trigger: GCATCCCCAGGCCAGGGAGCAAGGGCCCTCCAGGCG...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGAGACTTCAGAGCTGGTaGCTGTCACCTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLRLQSW*LSPVLA
Trigger: GGCCAGGACAGGTGACAGGCACCAGCTCTGAAGTCT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCACAGATCCCTGCAGATaGCTGAGGGAGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLTDPCR*LREEDA
Trigger: AGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGCTCCTGCTTCTGCGTaGTTTTCCCCTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLAPASA*FSPASD
Trigger: ATCAGAGGCAGGGGAAAACCACGCAGAAGCAGGAGC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp CTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCTCATTAAGCTGTCCCTaGTGCCGGTCTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LNRLPELAGTPGGHVVHPSLSCP*CRSEVF
Trigger: GAAGACCTCAGACCGGCACCAGGGACAGCTTAATGA...GGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPASAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQSAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPAFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGACAGACTCCCAGAACTaGCTGGGACTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLTDSQN*LGLQEV
Trigger: GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGCAAGACAGCAGATaGGTAAAGCACACGCTTTCA +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGEQDSR*VKHTLS
Trigger: TGAAAGCGTGTGCTTTACCCATCTGCTGTCTTGCTC...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGTCCTGGGCAGATCTTaGCTCTGGTCTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLVLGRS*LWSQME
Trigger: CTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGAC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCCTGTCCTGGCCGCCTaGAGGGCCCTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSPVLAA*RALAPW
Trigger: CCAGGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGG...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGAGGGAGGAGGATGCTaGGCTGGAAAGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLEGGGC*AGKTSE
Trigger: CTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGGCCTGAATCAGAGTaGACAGTAGGTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQERPESE*TVGLGE
Trigger: TTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGTGTCCTCAGAGCCAATaGTCAGTCCTTAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQECPQSQ*SVLKKL
Trigger: GAGCTTTTTAAGGACTGATCATTGGCTCTGAGGACA...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGAAGGCTAACTAGTTaGAGTGTCCTCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQERRLTS*SVLRAN
Trigger: ATTGGCTCTGAGGACACTTCAACTAGTTAGCCTTCT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGATCCCTGCAGATGCCTaGGGGAGGAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRIPADA*GRRMLG
Trigger: GCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGAT...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLVWVAS*WECPVE
Trigger: CTCCACAGGACACTCCCATCAAGAAGCCACCCAAAC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGTTTGTAGGGCCTCTTTaGGGTAATCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEFVGPL*GNQKAG
Trigger: TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAA...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCAAGACAAGGGTTCCTTaGGGACAGTCACCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLKTRVP*GQSPVL
Trigger: CAGGACAGGTGACTGTCCTCAAGGAACCCTTGTCTT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATTTCAGCTCCTGCTTCTaGGTGGTTTTCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYFSSCF*VVFPCL
Trigger: GAGGCAGGGGAAAACCACGCAGAAGCAGGAGCTGAA...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGAGGTCTTCAGCTCCTaGTTCTGCGTGGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLEVFSS*FCVVFP
Trigger: GGGGAAAACCACGCAGAAGCAGGAGCTGAAGACCTC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMSSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLSKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAGTTCCTGGAATAGATaGCTGGATCTGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQESSWNR*LDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCTCCAAGCACCTGTTaGGCTTGGCTTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPPSTC*AWLPVP
Trigger: AGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTCGCCTGGAGGGCCCTTaGTCCCTGGCCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFRLEGP*SLAWGC
Trigger: GCATCCCCAGGCCAGGGAGCAAGGGCCCTCCAGGCG...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCAATTGTTGGTCCTTCTaGCTTTGTCTGAGTACCACG +
Preference number: 4 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVNCWSF*LCLSTT
Trigger: CGTGGTACTCAGACAAAGGCAGAAGGACCAACAATT...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCTACCGTCTTTCTTTTTaGACAGCAGCCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLYRLSF*TAALLK
Trigger: TTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTA...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCCAGTTCCTCTCTCTTaGTCTCTGGTATCATCTAAG +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEPVPLS*SLVSSK
Trigger: CTTAGATGATACCAGAGAGCAAGAGAGAGGAACTGG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS-3UTR CCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGTCCTGGGCAGATCTTaGCTCTGGTCTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLVLGRS*LWSQME
Trigger: CTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGAC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLCSRAL*SCSLCW
Trigger: CCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCA...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGCCTTGCTCCCTGGCCTaGGGATGCTGCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAEPCSLA*GCCALP
Trigger: GGGCAAAGCGCAGCATCCCCAGGCCAGGGAGCAAGG...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCCCTTGCTCCCTGGCCTaGGGATGCTGCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCPCSLA*GCCALP
Trigger: GGGCAAAGCGCAGCATCCCCAGGCCAGGGAGCAAGG...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCAGGAGGATGCTGGGCTaGAAAGACTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLRRMLG*KDFRAG
Trigger: ACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGGATGGGAGTGTCCTGTaGAGGAAGGCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLDGSVL*RKAPSL
Trigger: CAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATC...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCTGCAACTCCGTAATTaGTTTGCTGACTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMLQLRN*FADWHR
Trigger: ACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTAGGCCTGAATCAGAGTaGACAGTAGGTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPARPESE*TVGLGE
Trigger: TTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCT...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAGACAGTCACCTGTCCTaGCCGCCTGGAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSDSHLS*PPGGPL
Trigger: CAAGGGCCCTCCAGGCGGCCAGGACAGGTGACTGTC...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR CCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTGACAGTCACCTGTCCTaGCCGCCTGGAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLDSHLS*PPGGPL
Trigger: CAAGGGCCCTCCAGGCGGCCAGGACAGGTGACTGTC...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR TCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGTCCCTGGTGCCGGTCTaGGGTCTTCAGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRSLVPV*GLQLLL
Trigger: AAGCAGGAGCTGAAGACCTCAGACCGGCACCAGGGA...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS-3UTR TCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTTGTCCTCAGAGCCAATaGTCAGTCCTTAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPACPQSQ*SVLKKL
Trigger: GAGCTTTTTAAGGACTGATCATTGGCTCTGAGGACA...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR TCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTAAGGCCCCCAGCCTGTaGGGAGAGGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAKAPSL*GEVVRQ
Trigger: CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTT...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCTTCTGCCTTTGTCTaGGTACCACGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPSAFV*VPRWCL
Trigger: CAAACACCACCGTGGTACTCAGACAAAGGCAGAAGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTTTGTAGGGCCTCTTTaGGGTAATCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMFVGPL*GNQKAG
Trigger: TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAA...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR TCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGCACAGCAGCCTTGCTaGAACAGGAAACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLAQQPC*NRKQTK
Trigger: CTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGCACAGCTCATCTCTCTaGTCTAGTAGAGGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: HIPDLTDSQNWLGLQEVMHSSSL*SSRGCL
Trigger: TAAGCAACCTCTACTAGAGCAGAGAGATGAGCTGTG...CATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGATGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: APTHPGLNRLPELAGTPGCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAELSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTCATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPAHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR GCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYRSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp CCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGTTTCTCTGCCTCTGACCTTCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCNCCTLVTRVSFSASDLQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...AAGGTCAGAGGCAGAGAAACTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp CCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGTTTCTCTGCCTCTGACCTTTTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: PCNCCTLVTRVSFSASDLLASSS*NRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAA...AAGGTCAGAGGCAGAGAAACTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACGGAGGGCCTGGGGTCTaGGCTGATCATGATGACCTC +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHGGPGV*ADHDDL
Trigger: GAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCC...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLGKWSH*DGSGGF
Trigger: AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCC...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGECSRAL*SCSLCW
Trigger: CCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCA...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTCCTTGCTCCCTGGCCTaGGGATGCTGCGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLPCSLA*GCCALP
Trigger: GGGCAAAGCGCAGCATCCCCAGGCCAGGGAGCAAGG...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGCCTGTCACCTGTCCTaGCCGCCTGGAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSACHLS*PPGGPL
Trigger: CAAGGGCCCTCCAGGCGGCCAGGACAGGTGACAGGC...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367026.7
CDS-3UTR CCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATAGGAGGATGCTGGGCTaGAAAGACTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYRRMLG*KDFRAG
Trigger: ACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCT...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGGAGGGAGGAGGATGCTaGGCTGGAAAGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGEEGGGC*AGKTSE
Trigger: CTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTC...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGACGGTGGTGTTTGGGTaGCTTCTTGATGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLTVVFG*LLDGSV
Trigger: GACACTCCCATCAAGAAGCCACCCAAACACCACCGT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGGCCCACATTGCCTTCTaGGAGGCAGCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLAHIAF*EAAAGS
Trigger: AGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGC...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR TCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCATCCCTGCAGATGCCTaGGGGAGGAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTIPADA*GRRMLG
Trigger: GCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGAT...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTATCCCTGCAGATGCCTaGGGGAGGAGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLIPADA*GRRMLG
Trigger: GCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGAT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTAAGGCCCCCAGCCTGTaGGGAGAGGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSKAPSL*GEVVRQ
Trigger: CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTT...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGAAGGCCCCCAGCCTGTaGGGAGAGGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLKAPSL*GEVVRQ
Trigger: CTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTT...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATGCACAGCAGCCTTGCTaGAACAGGAAACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYAQQPC*NRKQTK
Trigger: CTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGC...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCTCTCCAGCTCCCTGTaGTGGGTCCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTLSSSL*WVPRVL
Trigger: GAGGACCCTTGGGACCCAGCACAGGGAGCTGGAGAG...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCAGTTCCTGGAATAGATaGCTGGATCTGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: LNRLPELAGTPGGHVVHPSSWNR*LDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACT...GGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGCTGGCCTGGGGATGCTaGGCTTTGCCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLLAWGC*ALPFSS
Trigger: AGAGGAGAAGGGCAAAGCGCAGCATCCCCAGGCCAG...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCTTCTGGGAGGCAGCTaGTGGCTCTGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRLLGGS*WLWFSS
Trigger: AGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAG...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTAGCCATCGCCCACATTaGCTTCTGGGAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLSHRPH*LLGGSC
Trigger: GCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCT...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGTACCGTCTTTCTTTTTaGACAGCAGCCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQYRLSF*TAALLK
Trigger: TTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTA...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTACAGGTGTATAGCTaGTTTTCTAAGGATCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEVQVYS*FSKDLS
Trigger: ACTGAGATCCTTAGAAAACCAGCTATACACCTGTAC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CCA 90 bp GGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLNRLPELAGTPGGHVVHKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...ATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCGAGCAAGACAGCAGATaGGTAAAGCACACGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLEQDSR*VKHTLS
Trigger: TGAAAGCGTGTGCTTTACCCATCTGCTGTCTTGCTC...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLASSS*NRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAGGAGGGCCTGGGGTCTaGGCTGATCATGATGACCTC +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSGGPGV*ADHDDL
Trigger: GAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCC...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAEGKWSH*DGSGGF
Trigger: AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCC...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKPPGGK*SHWDGS
Trigger: GCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGATGGGAGTGTCCTGTaGAGGAAGGCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLDGSVL*RKAPSL
Trigger: CAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATC...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATGATGGGAGTGTCCTGTaGAGGAAGGCCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDDGSVL*RKAPSL
Trigger: CAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATC...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCTGCAACTCCGTAATTaGTTTGCTGACTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLQLRN*FADWHR
Trigger: ACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAG...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCTGGGAGGCAGCTGCTaGCTCTGGTTCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLLGGSC*LWFSSS
Trigger: AGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCTGGGAGGCAGCTGCTaGCTCTGGTTCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHLGGSC*LWFSSS
Trigger: AGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTGCCCACATTGCCTTCTaGGAGGCAGCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAAHIAF*EAAAGS
Trigger: AGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGC...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCTCTCTCTTGCTCTCTaGTATCATCTAAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLLSLAL*YHLSGP
Trigger: GGGCCCACTTAGATGATACCAGAGAGCAAGAGAGAG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS-3UTR TCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTCCCTGCAGTTTGGACTaGAGCACGTGGAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASPCSLD*STWSWL
Trigger: GAGCCAACTCCACGTGCTTCAGTCCAAACTGCAGGG...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR TCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTGTCCTCAGAGCCAATaGTCAGTCCTTAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLCPQSQ*SVLKKL
Trigger: GAGCTTTTTAAGGACTGATCATTGGCTCTGAGGACA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCCCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCPGSSS*RTAAVE
Trigger: CTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGG...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGAATCAGAAAGCTGGATaGTTTCCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQNQKAG*FPYPEL
Trigger: CAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATT...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR TCA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTTCTGACCTTTTTAGTTaGTCTGCAGTTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: NRLPELAGTPGGHVVHPASDLFS*SAVWTE
Trigger: TTCAGTCCAAACTGCAGATCAACTAAAAAGGTCAGA...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTGGGGATGCTGCGCTTTaGCCTTCTCCTCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLGDAAL*PSPLAP
Trigger: TGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATCCCC...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATCTGGCCTGGGGATGCTaGGCTTTGCCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDLAWGC*ALPFSS
Trigger: AGAGGAGAAGGGCAAAGCGCAGCATCCCCAGGCCAG...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTGGTCAGACAGATCCCTaGAGATGCCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAGQTDP*RCLREE
Trigger: CTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACC...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCAATTGTTGGTCCTTCTaGCTTTGTCTGAGTACCACG +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLNCWSF*LCLSTT
Trigger: CGTGGTACTCAGACAAAGGCAGAAGGACCAACAATT...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHSSSRQ*CSLRRQ
Trigger: CTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCT...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTAGCCATCGCCCACATTaGCTTCTGGGAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLISHRPH*LLGGSC
Trigger: GCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCT...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp CTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTTCTGGCTGAATGCAGTTCTCTaGACTTTCTTTGTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQQSPPSALGAIAHIAFWLNAVL*TFFVKS
Trigger: ACTCTTAACAAAGAAAGTGCAGAGAACTGCATTCAG...CCAGAAGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS-3UTR CCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR CCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGAGCACCTGTTGCGCTTaGCTTCCAGTTCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGESTCCA*LPVPGI
Trigger: TATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCT...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTCCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSPPGGK*SHWDGS
Trigger: GCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGG...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQIPPGGK*SHWDGS
Trigger: GCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGG...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSSVFPT*RQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCT...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLCSRAL*SCSLCW
Trigger: CCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCA...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGCTGGGAGGCAGCTGCTaGCTCTGGTTCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLLGGSC*LWFSSS
Trigger: AGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAG...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGCCCACATTGCCTTCTaGGAGGCAGCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFAAHIAF*EAAAGS
Trigger: AGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGC...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGCACCACCATCAGCACTaGGAGCCATCGCCCACATTG +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLHHHQH*EPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTG...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCACCACCATCAGCACTaGGAGCCATCGCCCACATTG +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLHHHQH*EPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTG...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR TCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTCCCTGCAGTTTGGACTaGAGCACGTGGAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFAPCSLD*STWSWL
Trigger: GAGCCAACTCCACGTGCTTCAGTCCAAACTGCAGGG...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR TCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTPGSSS*RTAAVE
Trigger: CTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGG...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAVWVAS*WECPVE
Trigger: CTCCACAGGACACTCCCATCAAGAAGCCACCCAAAC...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGGAGCTGTCAGAGGCCTaGATCAGAGTGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQELSEA*IRVDSR
Trigger: CCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTC...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATTGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GLNRLPELAGTPGGHVVHCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...ATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR GCA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDFTLLL*QGQGSL
Trigger: CAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAA...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAACCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLSKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLHGSLA*AHTWPH
Trigger: ATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCHGSLA*AHTWPH
Trigger: ATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSHGSLA*AHTWPH
Trigger: ATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTG...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCRALWS*SLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCG...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCACTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPKPSEFFAELLASDFHPLLKNC*SRALWS
Trigger: GCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAELLLKN*CSRALW
Trigger: CCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAG...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTGGGGATGCTGCGCTTTaGCCTTCTCCTCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSGDAAL*PSPLAP
Trigger: TGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATCCCC...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACTGGCCTGGGGATGCTaGGCTTTGCCCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLLAWGC*ALPFSS
Trigger: AGAGGAGAAGGGCAAAGCGCAGCATCCCCAGGCCAG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAAGACTTCAGAGCTGGTaGCTGTCACCTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQRLQSW*LSPVLA
Trigger: GGCCAGGACAGGTGACAGGCACCAGCTCTGAAGTCT...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367026.7
CDS-3UTR GCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGGTCAGACAGATCCCTaGAGATGCCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLGQTDP*RCLREE
Trigger: CTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACC...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGTCAGACAGATCCCTaGAGATGCCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQGQTDP*RCLREE
Trigger: CTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACC...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESSRQC*SLRRQE
Trigger: CTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQSSRQC*SLRRQE
Trigger: CTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASSSSRQ*CSLRRQ
Trigger: CTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCT...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAACTTCTGGGAGGCAGCTaGTGGCTCTGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQLLGGS*WLWFSS
Trigger: AGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAG...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCTTCTGGGAGGCAGCTaGTGGCTCTGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSLLGGS*WLWFSS
Trigger: AGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAG...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCAGCCATCGCCCACATTaGCTTCTGGGAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFSHRPH*LLGGSC
Trigger: GCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCT...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAAGCCATCGCCCACATTaGCTTCTGGGAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLSHRPH*LLGGSC
Trigger: GCAGCTGCCTCCCAGAAGGCAATGTGGGCGATGGCT...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAACTCCCCCTCACAGCTaGTGCTGCTTCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKTPPHS*CCFSSS
Trigger: GGAGGAAGAGAAGCAGCAGCAGCTGTGAGGGGGAGT...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLLLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHLLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGGTCCTGGGCAGATCTTaGCTCTGGTCTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAEVLGRS*LWSQME
Trigger: CTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGAC...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAGGAGGGCCTGGGGTCTaGGCTGATCATGATGACCTC +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLGGPGV*ADHDDL
Trigger: GAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCC...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFGKWSH*DGSGGF
Trigger: AAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCC...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFASVFPT*RQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCT...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSSCSLC*ILSVFP
Trigger: GGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCT...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASCSRAL*SCSLCW
Trigger: CCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCA...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCATGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSCSRAL*SCSLCW
Trigger: CCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCA...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAACTGGGAGGCAGCTGCTaGCTCTGGTTCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQLGGSC*LWFSSS
Trigger: AGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAG...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGCCCACATTGCCTTCTaGGAGGCAGCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSAHIAF*EAAAGS
Trigger: AGAGCCAGCAGCTGCCTCCCAGAAGGCAATGTGGGC...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATCACCACCATCAGCACTaGGAGCCATCGCCCACATTG +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDHHHQH*EPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTG...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAGCCTCTTGTAGGTCCTaGGTATCCAAGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSASCRS*VSKLHR
Trigger: CCTGTGCAGCTTGGATACCCAGGACCTACAAGAGGC...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS-3UTR TCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTCCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSPGSSS*RTAAVE
Trigger: CTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGG...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGGAGCTGTCAGAGGCCTaGATCAGAGTGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLELSEA*IRVDSR
Trigger: CCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTC...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGAAGACAAGGGTTCCTTaGGGACAGTCACCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQKTRVP*GQSPVL
Trigger: CAGGACAGGTGACTGTCCTCAAGGAACCCTTGTCTT...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCTTAAGCTGTCCCTGGTaGCGGTCTGAGGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTLSCPW*RSEVFS
Trigger: GCTGAAGACCTCAGACCGGCACCAGGGACAGCTTAA...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS-3UTR GCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAACCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLARSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSRSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLRSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLSKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLASKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCCCAGACACAGATTGTaGCATCCAAACCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHPRHRL*HPNPQA
Trigger: TGCTTGTGGGTTTGGATGGCACAATCTGTGTCTGGG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTCCTCCAAGCACCTGTTaGGCTTGGCTTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIPPSTC*AWLPVP
Trigger: AGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGG...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTCCTCCAAGCACCTGTTaGGCTTGGCTTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLPPSTC*AWLPVP
Trigger: AGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGG...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACTTTCACGGATCTCTTaGCTGCGCTCACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKLSRIS*LRSHLA
Trigger: GGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCTTTCACGGATCTCTTaGCTGCGCTCACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTLSRIS*LRSHLA
Trigger: GGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAG...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTRALWS*SLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCG...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKRALWS*SLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTCTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLILLKNC*SRALWS
Trigger: GCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAACTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQLLKNC*SRALWS
Trigger: GCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCGGGGATGCTGCGCTTTaGCCTTCTCCTCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFGDAAL*PSPLAP
Trigger: TGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATCCCC...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTACAGATCCCTGCAGATaGCTGAGGGAGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLTDPCR*LREEDA
Trigger: AGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTACAGATCCCTGCAGATaGCTGAGGGAGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFATDPCR*LREEDA
Trigger: AGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGT...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAACAGATCCCTGCAGATaGCTGAGGGAGGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKTDPCR*LREEDA
Trigger: AGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGT...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLISSRQC*SLRRQE
Trigger: CTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGA...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCTCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTSSRQC*SLRRQE
Trigger: CTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGA...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDSSSRQ*CSLRRQ
Trigger: CTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCT...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTCTTCTGGGAGGCAGCTaGTGGCTCTGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSLLGGS*WLWFSS
Trigger: AGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAG...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAGAACACTGCCAGTGCTaGAGCAATCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: VPKPSEFFAELLASDFHPEHCQC*SNHHHQ
Trigger: CTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTC...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGGAACACTGCCAGTGCTaGAGCAATCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLEHCQC*SNHHHQ
Trigger: CTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTC...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTCAGGAACACTGCCAGTaGTGCAGCAATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAQEHCQ*CSNHHH
Trigger: ATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTG...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAIGQEH*QCCSNH
Trigger: GTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAAT...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCIGQEH*QCCSNH
Trigger: GTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAAT...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAACTGGTGCCTGTCACCTaGTCTCTGGGAGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQLVPVT*SLGEEI
Trigger: GATTTCTTCTCCCAGAGAGCAGGTGACAGGCACCAG...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR GCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTCTGGTGCCTGTCACCTaGTCTCTGGGAGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASLVPVT*SLGEEI
Trigger: GATTTCTTCTCCCAGAGAGCAGGTGACAGGCACCAG...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR GCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCCCTCACAGCTGCTGCTaGTTCTCTTCCTCCCACGAC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFPHSCC*FSSSHD
Trigger: GTCGTGGGAGGAAGAGAAGCAGCAGCAGCTGTGAGG...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGGTCCTGGGCAGATCTTaGCTCTGGTCTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLVLGRS*LWSQME
Trigger: CTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGAC...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFSVFPT*RQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCT...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLISCSLC*ILSVFP
Trigger: GGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCT...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGTGCACTCCTTTTCCTTaGCCTGGAGCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRCTPFP*PGAAKS
Trigger: AGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCA...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTGGCCAGGAACACTGCCACACCACCATCAGCACTaGGAGCCATCGCCCACATTG +
Preference number: 4 (lower is better)
Translates to: CHKLFRSSGCLYWPGTLPHHHQH*EPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTG...TGGCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS-3UTR CCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACACCACCATCAGCACTaGGAGCCATCGCCCACATTG +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLHHHQH*EPSPTL
Trigger: CAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTCTGCCCCTTTACTaGGACTTCGCTACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLASLPLY*DFATLA
Trigger: AGCCAGAGTAGCGAAGTCCCAGTAAAGGGGCAGAGA...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR TCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSVWVAS*WECPVE
Trigger: CTCCACAGGACACTCCCATCAAGAAGCCACCCAAAC...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFVWVAS*WECPVE
Trigger: CTCCACAGGACACTCCCATCAAGAAGCCACCCAAAC...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATCCTTCTGCCTTTGTCTaGGTACCACGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDPSAFV*VPRWCL
Trigger: CAAACACCACCGTGGTACTCAGACAAAGGCAGAAGG...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCCTTCTGCCTTTGTCTaGGTACCACGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTPSAFV*VPRWCL
Trigger: CAAACACCACCGTGGTACTCAGACAAAGGCAGAAGG...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTGAGCTGTCAGAGGCCTaGATCAGAGTGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: KSEILSQLENPSCNVPKPELSEA*IRVDSR
Trigger: CCTACTGTCCACTCTGATTCAGGCCTCTGACAGCTC...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTAAGACAAGGGTTCCTTaGGGACAGTCACCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLKTRVP*GQSPVL
Trigger: CAGGACAGGTGACTGTCCTCAAGGAACCCTTGTCTT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000367025.8
CDS-3UTR GCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCCCAGGGATCGCTGTGTaGTCTGTAGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFPGIAV*SVVAAL
Trigger: CAGAGCAGCAACTACAGAGCACACAGCGATCCCTGG...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSRSLSP*RHSILA
Trigger: GGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCT...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp GTTGTCACAAATTATTCAGATCATCAGGTTGTCTTTATTGGCCAGGAACACTGCCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VVTNYSDHQVVFIGQEHCPGYPS*TGLCPL
Trigger: AAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGG...GCAGTGTTCCTGGCCAATAAAGACAACCTGATGATCTGAATAATTTGTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCAGCAAACCCTGCAACTaGTGTACTCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTSKPCN*CTLVTR
Trigger: CCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCT...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCCTTTCACGGATCTCTTaGCTGCGCTCACACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFLSRIS*LRSHLA
Trigger: GGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAG...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQILLLKN*CSRALW
Trigger: CCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAG...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFLLLKN*CSRALW
Trigger: CCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAG...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGTTCCTTATCCAGAACTaGAACTCCGTAATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLFLIQN*NSVIGL
Trigger: CAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAA...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR GCA 90 bp GGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATTTCCTTATCCAGAACTaGAACTCCGTAATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GGHVVHPAASRQVREEQYFLIQN*NSVIGL
Trigger: CAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAA...ATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCCTTGGCCTGGAGCTaGAAAGTCTTCTTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESLAWS*KVFFCS
Trigger: GCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATCCTTGGCCTGGAGCTaGAAAGTCTTCTTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQSLAWS*KVFFCS
Trigger: GCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCTGAATGCAGTTCTCTaGACTCCTTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHLNAVL*TPFPWP
Trigger: AGGCCAAGGAAAAGGAGTGCAGAGAACTGCATTCAG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVPKPSEFFAELLASDFHSSSRQ*CSLRRQ
Trigger: CTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCT...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGGAACACTGCCAGTGCTaGAGCAATCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLEHCQC*SNHHHQ
Trigger: CTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTC...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCAGGAACACTGCCAGTaGTGCAGCAATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSQEHCQ*CSNHHH
Trigger: ATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTG...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDIGQEH*QCCSNH
Trigger: GTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAAT...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTCATTAAGCTGTCCCTaGTGCCGGTCTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLISLSCP*CRSEVF
Trigger: GAAGACCTCAGACCGGCACCAGGGACAGCTTAATGA...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS-3UTR CCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASSAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFALLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATGCAGGCATTCAATCTTaGCCTGCAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDAGIQS*PAVAGA
Trigger: AGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGC...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGAGCACCTGTTGCGCTTaGCTTCCAGTTCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQSTCCA*LPVPGI
Trigger: TATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCT...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFSCSLC*ILSVFP
Trigger: GGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCT...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGAGGAGGATGCTGGGCTaGAAAGACTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLRRMLG*KDFRAG
Trigger: ACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCT...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTAGGAGGATGCTGGGCTaGAAAGACTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLRRMLG*KDFRAG
Trigger: ACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAGAGGGAGGAGGATGCTaGGCTGGAAAGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLEGGGC*AGKTSE
Trigger: CTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTC...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCGAGGGAGGAGGATGCTaGGCTGGAAAGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFEGGGC*AGKTSE
Trigger: CTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTC...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTGTTAGGGAAGGACTTTaGACTCCACACGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSVREGL*TPHGQS
Trigger: GCTTTGCCCGTGTGGAGTCCAAAGTCCTTCCCTAAC...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCATTACCCACCACCCTaGGAGGAGGGTATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQIHYPPP*EEGISA
Trigger: AGCTGAGATACCCTCCTCCCAGGGTGGTGGGTAATG...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR TCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACCTTCTGCCTTTGTCTaGGTACCACGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLPSAFV*VPRWCL
Trigger: CAAACACCACCGTGGTACTCAGACAAAGGCAGAAGG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGAATCAGAAAGCTGGATaGTTTCCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GLILKQTLQLLYSGHQGENQKAG*FPYPEL
Trigger: CAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATT...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR TCA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACTTTGTAGGGCCTCTTTaGGGTAATCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHFVGPL*GNQKAG
Trigger: TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAA...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTGCACAGCAGCCTTGCTaGAACAGGAAACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSAQQPC*NRKQTK
Trigger: CTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGC...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367025.8
CDS-3UTR TCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACTCTGGTCACTTTGCTaGGTTGGGCTGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKLWSLC*VGLDLD
Trigger: ATCCAAATCCAGCCCAACTCAGCAAAGTGACCAGAG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR GCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSSSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCATCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSSSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATCCCAGACACAGATTGTaGCATCCAAACCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDPRHRL*HPNPQA
Trigger: TGCTTGTGGGTTTGGATGGCACAATCTGTGTCTGGG...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGAATTGTTGGTCCTTCTaGCTTTGTCTGAGTACCACG +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLNCWSF*LCLSTT
Trigger: CGTGGTACTCAGACAAAGGCAGAAGGACCAACAATT...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAATGCAGTTCTCTaGACTCCTTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLLNAVL*TPFPWP
Trigger: AGGCCAAGGAAAAGGAGTGCAGAGAACTGCATTCAG...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGCTGAATGCAGTTCTCTaGACTCCTTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAELNAVL*TPFPWP
Trigger: AGGCCAAGGAAAAGGAGTGCAGAGAACTGCATTCAG...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACGAACACTGCCAGTGCTaGAGCAATCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: NVPKPSEFFAELLASDFHEHCQC*SNHHHQ
Trigger: CTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTC...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGAACACTGCCAGTGCTaGAGCAATCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFEHCQC*SNHHHQ
Trigger: CTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTC...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCAGGAACACTGCCAGTaGTGCAGCAATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQIQEHCQ*CSNHHH
Trigger: ATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTG...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCCAGGAACACTGCCAGTaGTGCAGCAATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFQEHCQ*CSNHHH
Trigger: ATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTG...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFIGQEH*QCCSNH
Trigger: GTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAAT...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTATTGGCCAGGAACACTaGCAGTGCTGCAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFIGQEH*QCCSNH
Trigger: GTGATTGCTGCAGCACTGGCAGTGTTCCTGGCCAAT...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFASAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAATTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTCTGCTCCCTGCAGTTTaGACTGAAGCACGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFLLPAV*TEARGV
Trigger: AACTCCACGTGCTTCAGTCCAAACTGCAGGGAGCAG...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQLASSS*NRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTAGCACCTGTTGCGCTTaGCTTCCAGTTCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFASTCCA*LPVPGI
Trigger: TATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCT...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCAGGAGGATGCTGGGCTaGAAAGACTTCAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VMYPNLLSFSLSCLLLIFRRMLG*KDFRAG
Trigger: ACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCT...GAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCACGGTGGTGTTTGGGTaGCTTCTTGATGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFTVVFG*LLDGSV
Trigger: GACACTCCCATCAAGAAGCCACCCAAACACCACCGT...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTACGGTGGTGTTTGGGTaGCTTCTTGATGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFTVVFG*LLDGSV
Trigger: GACACTCCCATCAAGAAGCCACCCAAACACCACCGT...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACGGTGGTGTTTGGGTaGCTTCTTGATGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQITVVFG*LLDGSV
Trigger: GACACTCCCATCAAGAAGCCACCCAAACACCACCGT...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAACTGCAACTCCGTAATTaGTTTGCTGACTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQLQLRN*FADWHR
Trigger: ACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAG...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGAGGCCTGAATCAGAGTaGACAGTAGGTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAERPESE*TVGLGE
Trigger: TTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCT...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTGTTAGGGAAGGACTTTaGACTCCACACGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFVREGL*TPHGQS
Trigger: GCTTTGCCCGTGTGGAGTCCAAAGTCCTTCCCTAAC...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTTGCACTCCTTTTCCTTaGCCTGGAGCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFACTPFP*PGAAKS
Trigger: AGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCA...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATGCACTCCTTTTCCTTaGCCTGGAGCTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKCTPFP*PGAAKS
Trigger: AGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCA...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCATCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VPKPSEFFAELLASDFHPSGCLY*PGTLPV
Trigger: CACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGA...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESGCLY*PGTLPV
Trigger: CACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGTCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLSGCLY*PGTLPV
Trigger: CACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGA...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCGGGACTTCGCTACTCTaGCTCAGTCTGGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTGTSLL*LSLEFS
Trigger: AGAGAATTCCAGACTGAGCCAGAGTAGCGAAGTCCC...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CCA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCTGGATCCTGAGCGTTaGAAATTCTGTGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSLDPER*KFCVLP
Trigger: AGGCAGGACACAGAATTTCCAACGCTCAGGATCCAG...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CCA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACGAGTTGGGCTGGATTTaGATGAGCTGGATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NVPKPSEFFAELLASDFHELGWI*MSWILS
Trigger: GCTCAGGATCCAGCTCATCCAAATCCAGCCCAACTC...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CCA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTTTGCTGAGTTGGGCTaGATTTGGATGAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSFAELG*IWMSWI
Trigger: GATCCAGCTCATCCAAATCCAGCCCAACTCAGCAAA...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR TCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGCACACGGGCAAAGCCTaGTCTTTCTTTGTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQHTGKA*SFFVKS
Trigger: ACTCTTAACAAAGAAAGATCAGGCTTTGCCCGTGTG...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: PSEFFAELLASDFHPRQLCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTCATCTGTAAGTCCCTaGTATCTGCTCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDSSVSP*YLLPAV
Trigger: AACTGCAGGGAGCAGATAGCAGGGACTTACAGATGA...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGC +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDACSCW*SFSKNR
Trigger: GCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGC...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTCATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTCCCAGACACAGATTGTaGCATCCAAACCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFPRHRL*HPNPQA
Trigger: TGCTTGTGGGTTTGGATGGCACAATCTGTGTCTGGG...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTAGTTCCTGGAATAGATaGCTGGATCTGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASSSWNR*LDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACT...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCAGTTCCTGGAATAGATaGCTGGATCTGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCSSWNR*LDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACT...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGAATTGTTGGTCCTTCTaGCTTTGTCTGAGTACCACG +
Preference number: 4 (lower is better)
Translates to: KPSEFFAELLASDFHPRQNCWSF*LCLSTT
Trigger: CGTGGTACTCAGACAAAGGCAGAAGGACCAACAATT...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTGCAAAGTCTTCTTTTaGAGCTGGTCTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAECKVFF*SWSLRS
Trigger: GGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTCCTTGGCCTGGAGCTaGAAAGTCTTCTTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFSLAWS*KVFFCS
Trigger: GCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGA...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTTCTGCAGTGACTCCTTaGCCTTCTGCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQISAVTP*PSAHSC
Trigger: ACAGCTATGAGCAGAAGGCCAAGGAGTCACTGCAGA...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCTTCAGAGCCTCATACTaGCTCCTCCACTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFFRASY*LLHSSH
Trigger: GTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAA...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGAGCAAGACAGCAGATaGGTAAAGCACACGCTTTCA +
Preference number: 4 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQEQDSR*VKHTLS
Trigger: TGAAAGCGTGTGCTTTACCCATCTGCTGTCTTGCTC...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGTTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLLASSS*NRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAA...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACAGCACCTGTTGCGCTTaGCTTCCAGTTCCTGGAATA +
Preference number: 4 (lower is better)
Translates to: NVPKPSEFFAELLASDFHSTCCA*LPVPGI
Trigger: TATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCT...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTCTGCAACTCCGTAATTaGTTTGCTGACTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLILQLRN*FADWHR
Trigger: ACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAG...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACTGCAACTCCGTAATTaGTTTGCTGACTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKLQLRN*FADWHR
Trigger: ACGATGCCAGTCAGCAAACCAATTACGGAGTTGCAG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGAATCAGAAAGCTGGATaGTTTCCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PKPSEFFAELLASDFHPRNQKAG*FPYPEL
Trigger: CAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATT...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGTTTGTAGGGCCTCTTTaGGGTAATCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLFVGPL*GNQKAG
Trigger: TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAA...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACACACGGGCAAAGCCTaGTCTTTCTTTGTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKHTGKA*SFFVKS
Trigger: ACTCTTAACAAAGAAAGATCAGGCTTTGCCCGTGTG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCATGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VPKPSEFFAELLASDFHPCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTCATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFAHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTAATTGTTGGTCCTTCTaGCTTTGTCTGAGTACCACG +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFANCWSF*LCLSTT
Trigger: CGTGGTACTCAGACAAAGGCAGAAGGACCAACAATT...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCAAGGGGAGTATTTCTaGGTACAGGTGTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQIQGEYF*VQVYSW
Trigger: CCAGCTATACACCTGTACCCAGAAATACTCCCCTTG...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTAAAAATCGCAGGGCCTaGTTCATCTGTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFKNRRA*FICKSL
Trigger: CAGGGACTTACAGATGAACCAGGCCCTGCGATTTTT...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTGAGCAAGACAGCAGATaGGTAAAGCACACGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFEQDSR*VKHTLS
Trigger: TGAAAGCGTGTGCTTTACCCATCTGCTGTCTTGCTC...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFLASSS*NRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAA...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAAGGCCTGAATCAGAGTaGACAGTAGGTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLRPESE*TVGLGE
Trigger: TTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCT...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTAGGCCTGAATCAGAGTaGACAGTAGGTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSRPESE*TVGLGE
Trigger: TTCTCCAAGACCTACTGTCCACTCTGATTCAGGCCT...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGTCTTCTTTTGCAGCTaGTCTCTGAGATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFVFFCS*SLRSQS
Trigger: AGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGAC...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTGTCTTCTTTTGCAGCTaGTCTCTGAGATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KSEILSQLENPSCNVPKPVFFCS*SLRSQS
Trigger: AGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGAC...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTGTCTTCTTTTGCAGCTaGTCTCTGAGATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQIVFFCS*SLRSQS
Trigger: AGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGAC...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTTCAGGTTGTCTTTATTaGCCAGGAACACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSSGCLY*PGTLPV
Trigger: CACTGGCAGTGTTCCTGGCCAATAAAGACAACCTGA...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCTGGATTTGGATGAGCTaGATCCTGAGCGTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTWIWMS*ILSVGN
Trigger: ATTTCCAACGCTCAGGATCCAGCTCATCCAAATCCA...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
3UTR CAA 72 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAA +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSC*LLIFTQGSCHK
Trigger: TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
3UTR CAA 72 bp TGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CNVPKPSEFFAE*LASDFHPRQLS
Trigger: TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR TCA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTAATCAGAAAGCTGGATaGTTTCCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: NPSCNVPKPSEFFAELLANQKAG*FPYPEL
Trigger: CAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATT...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTTGTAGGGCCTCTTTaGGGTAATCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFFVGPL*GNQKAG
Trigger: TCCAGCTTTCTGATTACCTCAAAGAGGCCCTACAAA...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACACACGGGCAAAGCCTaGTCTTTCTTTGTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLHTGKA*SFFVKS
Trigger: ACTCTTAACAAAGAAAGATCAGGCTTTGCCCGTGTG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VPKPSEFFAELLASDFHPRDTRH*GCLILN
Trigger: ATTCAGAATTAGACAACCTCAGTGACGAGTATCTCT...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR TCA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLRDTRH*GCLILN
Trigger: ATTCAGAATTAGACAACCTCAGTGACGAGTATCTCT...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCTGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTCVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp TCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTCATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: SEILSQLENPSCNVPKPSHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...AGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACATTCAATCTTGGCCTaGAGTTGCTGGTGCTCATTT +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLHSILA*SCWCSF
Trigger: AAATGAGCACCAGCAACTGCAGGCCAAGATTGAATG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTAGTTCCTGGAATAGATaGCTGGATCTGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFSSWNR*LDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACT...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATTCCTTATCCAGAACTaGAACTCCGTAATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: EFFAELLASDFHPRQLSQFLIQN*NSVIGL
Trigger: CAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTGCAAAGTCTTCTTTTaGAGCTGGTCTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: KSEILSQLENPSCNVPKPCKVFF*SWSLRS
Trigger: GGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCA...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 4 (lower is better)
Translates to: PSCNVPKPSEFFAELLASSFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 4 (lower is better)
Translates to: SEFFAELLASDFHPRQLSSFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 4 (lower is better)
Translates to: QLENPSCNVPKPSEFFAESFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATACCGTCTTTCTTTTTaGACAGCAGCCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKYRLSF*TAALLK
Trigger: TTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTA...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367025.8
CDS-3UTR CCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATCTAGCTCTAACCCCTTaGGGTTTATTTATAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDLALTP*GLFIGQ
Trigger: TTGGCCTATAAATAAACCCCAAGGGGTTAGAGCTAG...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR TCA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTAATCAGAAAGCTGGATaGTTTCCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLNQKAG*FPYPEL
Trigger: CAGTTCTGGATAAGGAAATCATCCAGCTTTCTGATT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR TCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTRDTRH*GCLILN
Trigger: ATTCAGAATTAGACAACCTCAGTGACGAGTATCTCT...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR TCA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLRDTRH*GCLILN
Trigger: ATTCAGAATTAGACAACCTCAGTGACGAGTATCTCT...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR GCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTTGTGTGCTCTGTAGTTaGTGCTCTGCATTCATTTTC +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQICVLCS*CSAFIF
Trigger: GAAAATGAATGCAGAGCAGCAACTACAGAGCACACA...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCTTCCTTATCCAGAACTaGAACTCCGTAATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: MYPNLLSFSLSCLLLIFTFLIQN*NSVIGL
Trigger: CAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAA...GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CCA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTGTACAGGTGTATAGCTaGTTTTCTAAGGATCTCAGT +
Preference number: 4 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIVQVYS*FSKDLS
Trigger: ACTGAGATCCTTAGAAAACCAGCTATACACCTGTAC...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR GCA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACTTCCTTATCCAGAACTaGAACTCCGTAATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NVPKPSEFFAELLASDFHFLIQN*NSVIGL
Trigger: CAAACCAATTACGGAGTTGCAGTTCTGGATAAGGAA...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTTTGTCTAATTCTGAATaGAGTTCTCTGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQLENPSCNVPKPSEFFALSNSE*SSLHSF
Trigger: AAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAA...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTGTCTAATTCTGAATaGAGTTCTCTGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKLSNSE*SSLHSF
Trigger: AAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAA...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTGTCTAATTCTGAATaGAGTTCTCTGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SCNVPKPSEFFAELLASDLSNSE*SSLHSF
Trigger: AAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAA...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR GCA 90 bp TTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 4 (lower is better)
Translates to: FFAELLASDFHPRQLSQISFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...AATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR GCA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTAAGTTTTTCGCTGAGTTaGTTGCTTCTGATTTTCACC +
Preference number: 4 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLSFSLS*LLLIFT
Trigger: GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
3UTR CAA 72 bp GCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTaGTCACAAATTATTCAGATCATCAGGTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: AELLASDFHPRQ*SQIIQIIRLSL
Trigger: TAAAGACAACCTGATGATCTGAATAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS CCA 90 bp ATAGCTCTCAGCCCACCGGGCCAAGCCAGGGGAGGGCCTGGGGTCTaGGCTGATCATGATGACCTCCAAGCACCTGTTGCGCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: IALSPPGQARGGPGV*ADHDDLQAPVALGF
Trigger: GAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCCAGACCCCAGGCCCTCCCCTGGCTTGGCCCGGTGGGCTGAGAGCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
ENST00000479796.5
CDS CCA 90 bp GTTGGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTTCACGGATCTCTTGCCTGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: VGSSASSPPGGKWSH*DGSGGFHGSLACAH
Trigger: GTGAGCGCAGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 90 bp CTCTGGAGCTGCTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTGGGACGGCAGCGGCGGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: LWSCSLCWILSVFPT*RQVVTLGRQRRLSR
Trigger: CCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 90 bp GCTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGCGGCGGCTTTCACGGATCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ALSVGSSASSPPGGK*SHWDGSGGFHGSLA
Trigger: GGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQERQVVT*GRQRRL
Trigger: AAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp CCAGGGACTGATGAAGGAAGAGGGACTCCCCCTCACAGCTGCTGCTaGTTCTCTTCCTCCCACGACCTCATTACCCACCACCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PGTDEGRGTPPHSCC*FSSSHDLITHHPGR
Trigger: CCTCCCAGGGTGGTGGGTAATGAGGTCGTGGGAGGAAGAGAAGCAGCAGCAGCTGTGAGGGGGAGTCCCTCTTCCTTCATCAGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS TCA 90 bp GCTCTCTGGGAGAAGAAATCCTTCTGGCACAAGACAAGGGTTCCTTaGGGACAGTCACCTGTCCTGGCCGCCTGGAGGGCCCTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: ALWEKKSFWHKTRVP*GQSPVLAAWRALAP
Trigger: GGGAGCAAGGGCCCTCCAGGCGGCCAGGACAGGTGACTGTCCTCAAGGAACCCTTGTCTTGTGCCAGAAGGATTTCTTCTCCCAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000468672.5
ENST00000478359.5
CDS GCA 90 bp AGACCAGGGACTGATGAAGGAAGAGGGACTCCCCCTCACAGCTGCTaGTGCTTCTCTTCCTCCCACGACCTCATTACCCACCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: RPGTDEGRGTPPHSC*CFSSSHDLITHHPG
Trigger: CCCAGGGTGGTGGGTAATGAGGTCGTGGGAGGAAGAGAAGCAGCAGCAGCTGTGAGGGGGAGTCCCTCTTCCTTCATCAGTCCCTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CCA 90 bp GCTGTCCCTGGTGCCGGTCTGAGGTCTTCAGCTCCTGCTTCTGCGTaGTTTTCCCCTGCCTCTGATCTGCTCTCCAGAAACACCACCACC +
Preference number: 5 (lower is better)
Translates to: AVPGAGLRSSAPASA*FSPASDLLSRNTTT
Trigger: GGTGGTGGTGTTTCTGGAGAGCAGATCAGAGGCAGGGGAAAACCACGCAGAAGCAGGAGCTGAAGACCTCAGACCGGCACCAGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGCTGAAGCACGTGGAGTaGGCTCTCCAGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQELKHVE*ALQLPV
Trigger: CACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAG...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACTGAAGCACGTGGAGTaGGCTCTCCAGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLKHVE*ALQLPV
Trigger: CACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367023.5
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp CACCACCACCTCACCACAGAAGCACCAGCCCACAGCTCATCTCTCTaGTCTAGTAGAGGTTGCTTAGGGCTTCAGCCAATCCCCGCTGCG +
Preference number: 5 (lower is better)
Translates to: HHHLTTEAPAHSSSL*SSRGCLGLQPIPAA
Trigger: CGCAGCGGGGATTGGCTGAAGCCCTAAGCAACCTCTACTAGAGCAGAGAGATGAGCTGTGGGCTGGTGCTTCTGTGGTGAGGTGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS GCA 90 bp AGGTTCCTCCTCCTGAAGAACTGCTGCAGTCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTGGCGGCAA +
Preference number: 5 (lower is better)
Translates to: RFLLLKNCCSRALWS*SLCWILSVFPTWRQ
Trigger: TTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp GAGAGGTGGTCAGACAGATCCCTGCAGATGCCTGAGGGAGGAGGATaGTGGGCTGGAAAGACTTCAGAGCTGGTGCCTGTCACCTGTCCT +
Preference number: 5 (lower is better)
Translates to: ERWSDRSLQMPEGGG*WAGKTSELVPVTCP
Trigger: AGGACAGGTGACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACCACCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367026.7
ENST00000400959.7
CDS GCA 90 bp GAGAGGTGGTCAGACAGATCCCTGCAGATGCCTGAGGGAGGAGGATaGTGGGCTGGAAAGACTTCAGAGCTGGTGCCTGTCACCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ERWSDRSLQMPEGGG*WAGKTSELVPVTCS
Trigger: AGAGCAGGTGACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACCACCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000478359.5
CDS GCA 90 bp GTCAGACCAGGGACTGATGAAGGAAGAGGGACTCCCCCTCACAGCTaGTGCTGCTTCTCTTCCTCCCACGACCTCATTACCCACCACCCT +
Preference number: 5 (lower is better)
Translates to: VRPGTDEGRGTPPHS*CCFSSSHDLITHHP
Trigger: AGGGTGGTGGGTAATGAGGTCGTGGGAGGAAGAGAAGCAGCAGCAGCTGTGAGGGGGAGTCCCTCTTCCTTCATCAGTCCCTGGTCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS GCA 90 bp CTTCAGAGCCTCATACTGGCTCCTCCACTCTTCACACTTCTGCTCTaGCAGGGCCAGGGATCGCTGAGGGAGATCAGAGAGGAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LQSLILAPPLFTLLL*QGQGSLREIREERA
Trigger: AGCCCTCTCCTCTCTGATCTCCCTCAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474496.5
ENST00000476050.5
CDS CCA 90 bp AGCTCCAGGTTCCTCCTCCTGAAGAACTGCTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SSRFLLLKNCCSRAL*SCSLCWILSVFPTW
Trigger: CCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 90 bp GGCCAGGAACACTGCCAGTGCTGCAGCAATCACCACCATCAGCACTaGGAGCCATCGCCCACATTGCCTCTTGTAGGTCCTGGGTATCCA +
Preference number: 5 (lower is better)
Translates to: GQEHCQCCSNHHHQH*EPSPTLPLVGPGYP
Trigger: TGGATACCCAGGACCTACAAGAGGCAATGTGGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTGTTCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS-3UTR CAA 90 bp CCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTACCTCCAAGCACCTGTaGCGCTTGGCTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PTHPGLNRLPELAGTPGGTSKHL*RLASSS
Trigger: GGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGT...ACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGC +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEAFTDL*PALTLG
Trigger: GCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGAGCTGCTCTCTCTGTaGGATCCTCAGCGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQEELLSL*DPQRLP
Trigger: GGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTC...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS TCA 90 bp CTTCTGCCTTTGTCTGAGTACCACGGTGGTGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAGGAAGGCCCCCAGCCTGTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LLPLSEYHGGVWVAS*WECPVEEGPQPVRR
Trigger: TCTCCTCACAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTACTCAGACAAAGGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp GGTCTTCAGCTCCTGCTTCTGCGTGGTTTTCCCCTGCCTCTGATCTaGTCTCCAGAAACACCACCACCTCACCACAGAAGCACCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GLQLLLLRGFPLPLI*SPETPPPHHRSTSP
Trigger: TGGGCTGGTGCTTCTGTGGTGAGGTGGTGGTGTTTCTGGAGAGCAGATCAGAGGCAGGGGAAAACCACGCAGAAGCAGGAGCTGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS GCA 90 bp TCCTCCTTCAGAGCCTCATACTGGCTCCTCCACTCTTCACACTTCTaGTCTGCCAGGGCCAGGGATCGCTGTGTGCTCTGTAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSFRASYWLLHSSHF*SARARDRCVLCSCC
Trigger: GCAGCAACTACAGAGCACACAGCGATCCCTGGCCCTGGCAGAGCAGAAGTGTGAAGAGTGGAGGAGCCAGTATGAGGCTCTGAAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000477431.1
ENST00000478359.5
ENST00000487271.5
CDS GCA 90 bp CTGGGAGGCAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: LGGSCWLWFSSSRQC*SLRRQERYSSLRLS
Trigger: AGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000460314.1
ENST00000467830.1
ENST00000471368.1
CDS GCA 90 bp CTTCTGGGAGGCAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LLGGSCWLWFSSSRQ*CSLRRQERYSSLRL
Trigger: CAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCCTCCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000460314.1
ENST00000467830.1
ENST00000471368.1
CDS GCA 90 bp AGGTTCCTCCTCCTGAAGAACTGCTGCAGTCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RFLLLKNCCSRALWS*SLCWILSVFPTCQG
Trigger: ACCCTGACAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468672.5
CDS CCA 90 bp CTGAAGAACTGCTGCAGTCGAGCTCTCTGGAGCTGCTCTCTCTGTTaGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATTG +
Preference number: 5 (lower is better)
Translates to: LKNCCSRALWSCSLC*ILSVFPTWRQVVTL
Trigger: CAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 90 bp AGCTCCAGGTTCCTCCTCCTGAAGAACTGCTGCAGTCGAGCTCTCTaGAGCTGCTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: SSRFLLLKNCCSRAL*SCSLCWILSVFPTC
Trigger: ACAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468672.5
CDS-3UTR CAA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLRQVVT*GRQRRL
Trigger: AAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS TCA 90 bp GATGCTGCGCTTTGCCCTTCTCCTCTAGCTCCAGGTTCCTCCTCCTaGAGAACTGCTGCAGTCGAGCTCTCTGGAGCTGCTCTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: DAALCPSPLAPGSSS*RTAAVELSGAALSV
Trigger: AACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCTAGAGGAGAAGGGCAAAGCGCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS GCA 90 bp TTGCCCTTCTCCTCTAGCTCCAGGTTCCTCCTCCTGAAGAACTGCTaGAGTCGAGCTCTCTGGAGCTGCTCTCTCTGTTGGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LPFSSSSRFLLLKNC*SRALWSCSLCWILS
Trigger: GCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCTAGAGGAGAAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS GCA 90 bp GCTTTGCCCTTCTCCTCTAGCTCCAGGTTCCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGGAGCTGCTCTCTCTGTTGGATCCTC +
Preference number: 5 (lower is better)
Translates to: ALPFSSSSRFLLLKN*CSRALWSCSLCWIL
Trigger: GAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCTAGAGGAGAAGGGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS-3UTR CAA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTCAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: NRLPELAGTPGGHVVHPAQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CAA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGCAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGTGTTTGGGTGGCTTCTaGATGGGAGTGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQECLGGF*MGVSCG
Trigger: TCCACAGGACACTCCCATCAAGAAGCCACCCAAACA...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGTACCACGGTGGTGTTaGGGTGGCTTCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQVPRWC*GGFLMG
Trigger: TCCCATCAAGAAGCCACCCAAACACCACCGTGGTAC...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGTTGGTCCTTCTGCCTTaGTCTGAGTACCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQELVLLP*SEYHGG
Trigger: ACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAA...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS TCA 90 bp ATGAGCTGGATCCTGAGCGTTGGAAATTCTGTGTCCTGCCTCCTCTaGTCACTGGAGTCAGACCAGGGACTCCTAGTCCCAGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: MSWILSVGNSVSCLL*SLESDQGLLVPGSN
Trigger: GTTGGAGCCTGGGACTAGGAGTCCCTGGTCTGACTCCAGTGATCAGAGGAGGCAGGACACAGAATTTCCAACGCTCAGGATCCAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479796.5
CDS GCA 90 bp GGCCTCCAAGGAGAAGAGTACCTTGTAGGTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTTGCAGGCATTCAATCTTGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GLQGEEYLVGPGYPS*TGLCPLAGIQSWPA
Trigger: TGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGGTACTCTTCTCCTTGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CCA 90 bp AGTCCCAGGCTCCAACTCAAGCCACTCGGGAAAGCATTCCAGTCCTaGGCAGATCTTGGCTCTGGTCTCAGATGGAGCAAGACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SPRLQLKPLGKAFQS*ADLGSGLRWSKTAD
Trigger: ATCTGCTGTCTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTGAGTTGGAGCCTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
ENST00000479796.5
CDS CCA 90 bp CTGCTGCTGCTTCTCTTCCTCCCACGACCTCATTACCCACCACCCTaGGAGGAGGGTATCTCAGCTTCACCAACTAGCAGGCATTTGCTA +
Preference number: 5 (lower is better)
Translates to: LLLLLFLPRPHYPPP*EEGISASPTSRHLL
Trigger: TAGCAAATGCCTGCTAGTTGGTGAAGCTGAGATACCCTCCTCCCAGGGTGGTGGGTAATGAGGTCGTGGGAGGAAGAGAAGCAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CCA 90 bp GCCATGCACTCAAGGCCTCCAAGGAGAAGAGTACCTTGTAGGTCCTaGGTATCCAAGCTGCACAGGTCTCTGTCCCCTTGCAGGCATTCA +
Preference number: 5 (lower is better)
Translates to: AMHSRPPRRRVPCRS*VSKLHRSLSPCRHS
Trigger: TGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGGTACTCTTCTCCTTGGAGGCCTTGAGTGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS-3UTR CAA 90 bp ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: THPGLNRLPELAGTPGGHCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...ATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS-3UTR CAA 90 bp ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATAGTCCTGGGCAGATCTaGGCTCTGGTCTCAGATGGA +
Preference number: 5 (lower is better)
Translates to: THPGLNRLPELAGTPGGHSPGQI*ALVSDG
Trigger: TCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACT...ATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CAA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGACTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLSGLM*VPSLLS
Trigger: GGAAAGCAGACTTGGCACCAACATTAACCCTGACAG...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp CCTTGTAGGTCCTGGGTATCCAAGCTGCACAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCCTGCAGTTGCTGGTGCTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: PCRSWVSKLHRSLSP*RHSILACSCWCSFS
Trigger: GGAAAATGAGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CCA 90 bp CAAGCCACTCGGGAAAGCATTCCAGTCCTGGGCAGATCTTGGCTCTaGTCTCAGATGGAGCAAGACAGCAGATGGGTAAAGCACACGCTT +
Preference number: 5 (lower is better)
Translates to: QATRESIPVLGRSWL*SQMEQDSRWVKHTL
Trigger: AAGCGTGTGCTTTACCCATCTGCTGTCTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
ENST00000479796.5
CDS CCA 90 bp CCAACTCAAGCCACTCGGGAAAGCATTCCAGTCCTGGGCAGATCTTaGCTCTGGTCTCAGATGGAGCAAGACAGCAGATGGGTAAAGCAC +
Preference number: 5 (lower is better)
Translates to: PTQATRESIPVLGRS*LWSQMEQDSRWVKH
Trigger: GTGCTTTACCCATCTGCTGTCTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
ENST00000479796.5
CDS-3UTR CAA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000400959.7
CDS-3UTR CAA 90 bp ACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCCCACAAGCACATGAATaGTACCTCAATAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TPRTGWDSRRSCSPSRCLPQAHE*YLNKAA
Trigger: AGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGG...GAGGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CAA 90 bp AACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTCTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: NRLPELAGTPGGHVVHPALSGLM*VPSLLS
Trigger: GGAAAGCAGACTTGGCACCAACATTAACCCTGACAG...AGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CAA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGACCTCCAAGCACCTGTaGCGCTTGGCTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLTSKHL*RLASSS
Trigger: GGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp TCTTGTAGGTCCTGGGTATCCAAGCTGCACAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCCTGCAGTTGCTGGTGCTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: SCRSWVSKLHRSLSP*RHSILACSCWCSFS
Trigger: GGAAAATGAGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000477431.1
ENST00000488702.1
CDS-3UTR CAA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGAGTCCTGGGCAGATCTaGGCTCTGGTCTCAGATGGA +
Preference number: 5 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLSPGQI*ALVSDG
Trigger: TCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACT...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: SEFFAELLASDFHPRQLSRQVVT*GRQRRL
Trigger: AAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCG...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTGTTTGGGTGGCTTCTaGATGGGAGTGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLCLGGF*MGVSCG
Trigger: TCCACAGGACACTCCCATCAAGAAGCCACCCAAACA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGTACCACGGTGGTGTTaGGGTGGCTTCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLVPRWC*GGFLMG
Trigger: TCCCATCAAGAAGCCACCCAAACACCACCGTGGTAC...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp AAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCTTGGTCCTTCTGCCTTaGTCTGAGTACCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: KKLPHIPDLTDSQNWLGLLVLLP*SEYHGG
Trigger: ACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAA...GAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp CTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGAACTCCGTAATTGGTTaGCTGACTGGCATCGTTCTT +
Preference number: 5 (lower is better)
Translates to: LPHIPDLTDSQNWLGLQENSVIG*LTGIVL
Trigger: AAGAACGATGCCAGTCAGCAAACCAATTACGGAGTT...CTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAAACTCCGTAATTGGTTaGCTGACTGGCATCGTTCTT +
Preference number: 5 (lower is better)
Translates to: APTHPGLNRLPELAGTPGNSVIG*LTGIVL
Trigger: AAGAACGATGCCAGTCAGCAAACCAATTACGGAGTT...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp AAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGTTTTGCACAGCAGCCTaGCTGAAACAGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: KLPHIPDLTDSQNWLGLQFCTAA*LKQETD
Trigger: GTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAA...CTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS TCA 90 bp CTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAATGCAGTTCTCTGCACTGGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: LDSAAAYAGRRDTRH*GCLILNAVLCTGEN
Trigger: GTTCTCCCCAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS GCA 90 bp TCTCTGCACTCCTTTTCCTTGGCCTGGAGCTGCAAAGTCTTCTTTTaGAGCTGGTCTCTGAGATCCCAGTCTTTCTCCTTCCCTGTACCC +
Preference number: 5 (lower is better)
Translates to: SLHSFSLAWSCKVFF*SWSLRSQSFSFPVP
Trigger: GGGTACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS GCA 90 bp GCAGTTCTCTCCTTTTCCTTGGCCTGGAGCTGCAAAGTCTTCTTTTaGAGCTGGTCTCTGAGATCCCAGTCTTTCTCCTTCCCTGTACCC +
Preference number: 5 (lower is better)
Translates to: AVLSFSLAWSCKVFF*SWSLRSQSFSFPVP
Trigger: GGGTACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGAGAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTCGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSRQVVT*GRQRRL
Trigger: AAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCG...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGATTAACACGTCCCTTCTaGGTACCGTCTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: APTHPGLNRLPELAGTPGLTRPF*VPSFFL
Trigger: CAAAAAGAAAGACGGTACCAAGAAGGGACGTGTTAA...TCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp CCTCTGACCTTTTTAGTTGATCTTGTAGGTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTTGCAGGCATTCAATCTTGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PLTFLVDLVGPGYPS*TGLCPLAGIQSWPA
Trigger: TGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGATCAACTAAAAAGGTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000488702.1
CDS CCA 90 bp GACACAGAGAGAAGACGGCCATCTACAAAGCCAAGGAAAGAGCCCTaGGATAGATCTTTCCCTAAACGCCCTCAGAAGGAAACAACCCTG +
Preference number: 5 (lower is better)
Translates to: DTERRRPSTKPRKEP*DRSFPKRPQKETTL
Trigger: CAGGGTTGTTTCCTTCTGAGGGCGTTTAGGGAAAGATCTATCCCAGGGCTCTTTCCTTGGCTTTGTAGATGGCCGTCTTCTCTCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACTGAAGCACGTGGAGTaGGCTCTCCAGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: SEFFAELLASDFHPRQLSLKHVE*ALQLPV
Trigger: CACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAG...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACACCTCCAAGCACCTGTaGCGCTTGGCTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHTSKHL*RLASSS
Trigger: GGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGT...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLRQVVT*GRQRRL
Trigger: AAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAGCCATCGCCCACATaGCCTCTTGTAGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PSCNVPKPSEFFAELLASEPSPT*PLVGPG
Trigger: CCCAGGACCTACAAGAGGCAATGTGGGCGATGGCTC...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS TCA 90 bp CTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAATGCAGTTCTCTGCACTCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LDSAAAYAGRRDTRH*GCLILNAVLCTPFP
Trigger: AGGAAAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS TCA 90 bp GCTGCTTCTGTAGTTTATCCTCCTAGAACCCTCTGGTCACTTTGCTaGGTTGGGCTGGATTTGGATGAGCTGGATCCTGAGCGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: AASVVYPPRTLWSLC*VGLDLDELDPERWK
Trigger: TTTCCAACGCTCAGGATCCAGCTCATCCAAATCCAGCCCAACTCAGCAAAGTGACCAGAGGGTTCTAGGAGGATAAACTACAGAAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS-3UTR CAA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTCTGAAGCACGTGGAGTaGGCTCTCCAGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLLKHVE*ALQLPV
Trigger: CACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAG...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTCTGAAGCACGTGGAGTaGGCTCTCCAGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: SQLENPSCNVPKPSEFFALKHVE*ALQLPV
Trigger: CACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAG...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: PSEFFAELLASDFHPRQLQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCTTTGCTGACCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PHIPDLTDSQNWLGLQEVFADLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGGTCAGCAAA...GACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTGAGCTGCTCTCTCTGTaGGATCCTCAGCGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAELLSL*DPQRLP
Trigger: GGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTC...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCTGCACTCCTTTTCCTaGGCCTGGAGCTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PKPSEFFAELLASDFHPRLHSFS*AWSCKV
Trigger: GACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAG...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGCTGCACTCCTTTTCCTaGGCCTGGAGCTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PSEFFAELLASDFHPRQLLHSFS*AWSCKV
Trigger: GACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAG...CAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCTTAACACGTCCCTTCTaGGTACCGTCTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: LNRLPELAGTPGGHVVHPLTRPF*VPSFFL
Trigger: CAAAAAGAAAGACGGTACCAAGAAGGGACGTGTTAA...GGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS-3UTR CAA 90 bp CAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCATTCTCTGCACTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: QLLALVQLFSTVLQLTQAFSALS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGTGCAGAGAA...TGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS TCA 90 bp ACGTCCCTTCTTGGTACCGTCTTTCTTTTTGCACAGCAGCCTTGCTaGAACAGGAAACAGACAAAGCCACAAGGTTCGCAAACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: TSLLGTVFLFAQQPC*NRKQTKPQGSQTPV
Trigger: AACTGGGGTTTGCGAACCTTGTGGCTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTACCAAGAAGGGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367025.8
ENST00000400959.7
ENST00000478359.5
CDS GCA 90 bp CGCAGGCAGGAGAGATACTCGTCACTGAGGTTGTCTAATTCTGAATaGAGTTCTCTGCACTGGGGAGAACATCACCAAAGTCATCACTGT +
Preference number: 5 (lower is better)
Translates to: RRQERYSSLRLSNSE*SSLHWGEHHQSHHC
Trigger: ACAGTGATGACTTTGGTGATGTTCTCCCCAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS CCA 90 bp TGCAACTCCGTAATTGGTTTGCTGACTGGCATCGTTCTTAATTGTTaGTCCTTCTGCCTTTGTCTGAGTACCACGGTGGTGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CNSVIGLLTGIVLNC*SFCLCLSTTVVFGW
Trigger: CCACCCAAACACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAACAATTAAGAACGATGCCAGTCAGCAAACCAATTACGGAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PSCNVPKPSEFFAELLASCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGCAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAGTCCTGGGCAGATCTaGGCTCTGGTCTCAGATGGA +
Preference number: 5 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLSPGQI*ALVSDG
Trigger: TCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACT...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGCCACAAGCACATGAATaGTACCTCAATAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VLKKLPHIPDLTDSQNWLPQAHE*YLNKAA
Trigger: AGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGG...CAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400959.7
ENST00000478359.5
CDS-3UTR CAA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTACCTCCAAGCACCTGTaGCGCTTGGCTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLTSKHL*RLASSS
Trigger: GGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGT...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGC +
Preference number: 5 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLAFTDL*PALTLG
Trigger: GCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGC...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAGAGCTGCTCTCTCTGTaGGATCCTCAGCGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKELLSL*DPQRLP
Trigger: GGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTC...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGGTACCACGGTGGTGTTaGGGTGGCTTCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: QLENPSCNVPKPSEFFAEVPRWC*GGFLMG
Trigger: TCCCATCAAGAAGCCACCCAAACACCACCGTGGTAC...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GGATTGATTTTGAAGCAAACCCTGCAACTGCTGTACTCTGGTCACCAGGGTGAGTTTTGCACAGCAGCCTaGCTGAAACAGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: GLILKQTLQLLYSGHQGEFCTAA*LKQETD
Trigger: GTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAA...CTCACCCTGGTGACCAGAGTACAGCAGTTGCAGGGTTTGCTTCAAAATCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478359.5
CDS TCA 90 bp CTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTaGGGTTGTCTAATTCTGAATGCAGTTCTCTGCACTTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LDSAAAYAGRRDTRH*GCLILNAVLCTFFV
Trigger: AACAAAGAAAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS-3UTR CAA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: SCNVPKPSEFFAELLASDCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp CTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCTTTGCTGACCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LNRLPELAGTPGGHVVHPFADLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGGTCAGCAAA...GGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367023.5
ENST00000478359.5
CDS-3UTR CAA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAAGTCCTGGGCAGATCTaGGCTCTGGTCTCAGATGGA +
Preference number: 5 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKSPGQI*ALVSDG
Trigger: TCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACT...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGC +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPAFTDL*PALTLG
Trigger: GCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGC...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp ATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGC +
Preference number: 5 (lower is better)
Translates to: ILSQLENPSCNVPKPSEFAFTDL*PALTLG
Trigger: GCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGC...AAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTGTACCACGGTGGTGTTaGGGTGGCTTCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIVPRWC*GGFLMG
Trigger: TCCCATCAAGAAGCCACCCAAACACCACCGTGGTAC...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTTTGGTCCTTCTGCCTTaGTCTGAGTACCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: PSCNVPKPSEFFAELLASLVLLP*SEYHGG
Trigger: ACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAA...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp GAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTCTGCACTCCTTTTCCTaGGCCTGGAGCTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: ENPSCNVPKPSEFFAELLLHSFS*AWSCKV
Trigger: GACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAG...AAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS TCA 90 bp GATTTCAGAGCCAAAACAGTGAATTTGGTACAAAGTAGTGGTGACTaGGGAACTGAAAGCCAGATGCTGTCAGCTGCCTTTGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: DFRAKTVNLVQSSGD*GTESQMLSAAFGVP
Trigger: AGGGACTCCAAAGGCAGCTGACAGCATCTGGCTTTCAGTTCCTCAGTCACCACTACTTTGTACCAAATTCACTGTTTTGGCTCTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476050.5
ENST00000488702.1
CDS CCA 90 bp ATCTCAGCTTCACCAACTAGCAGGCATTTGCTAGCTCTAACCCCTTaGGGTTTATTTATAGGCCAAACAGACTCAACAGGTAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: ISASPTSRHLLALTP*GLFIGQTDSTGSRL
Trigger: GAGTCTGCTACCTGTTGAGTCTGTTTGGCCTATAAATAAACCCCAAGGGGTTAGAGCTAGCAAATGCCTGCTAGTTGGTGAAGCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CCA 90 bp CTCTCTAGGGCTAACAGTGAGTTGACTCTGGACTGCTATGTGGTTTaGGGCTGGGGAGTTGGATGTGATTTGGAAAATCAAGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LSRANSELTLDCYVV*GWGVGCDLENQVCK
Trigger: TTTACACACTTGATTTTCCAAATCACATCCAACTCCCCAGCCCCAAACCACATAGCAGTCCAGAGTCAACTCACTGTTAGCCCTAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACTGCAGGCATTCAATCTaGGCCTGCAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: NVPKPSEFFAELLASDFHCRHSI*ACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCA...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGC +
Preference number: 5 (lower is better)
Translates to: NVPKPSEFFAELLASDFHQVSVP*QAFNLG
Trigger: GCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTG...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000477431.1
CDS-3UTR CAA 90 bp TGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCCTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: WKTQAVMYPNLLSFSLSCLSGLM*VPSLLS
Trigger: GGAAAGCAGACTTGGCACCAACATTAACCCTGACAG...GCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGCTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQLSGLM*VPSLLS
Trigger: GGAAAGCAGACTTGGCACCAACATTAACCCTGACAG...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGTGTTTGGGTGGCTTCTaGATGGGAGTGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLCLGGF*MGVSCG
Trigger: TCCACAGGACACTCCCATCAAGAAGCCACCCAAACA...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTTGTTTGGGTGGCTTCTaGATGGGAGTGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SQLENPSCNVPKPSEFFACLGGF*MGVSCG
Trigger: TCCACAGGACACTCCCATCAAGAAGCCACCCAAACA...AGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACGTACCACGGTGGTGTTaGGGTGGCTTCTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: NVPKPSEFFAELLASDFHVPRWC*GGFLMG
Trigger: TCCCATCAAGAAGCCACCCAAACACCACCGTGGTAC...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTTGGTCCTTCTGCCTTaGTCTGAGTACCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSLVLLP*SEYHGG
Trigger: ACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAA...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTGGTCCTTCTGCCTTaGTCTGAGTACCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: SCNVPKPSEFFAELLASDLVLLP*SEYHGG
Trigger: ACCACCGTGGTACTCAGACAAAGGCAGAAGGACCAA...ATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGTCACTTTGCTGAGTaGGGCTGGATTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQGHFAE*GWIWMS
Trigger: GCTCATCCAAATCCAGCCCAACTCAGCAAAGTGACC...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACCCACAAGCACATGAATaGTACCTCAATAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHPQAHE*YLNKAA
Trigger: AGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGG...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACTGTTTGGGTGGCTTCTaGATGGGAGTGTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: NVPKPSEFFAELLASDFHCLGGF*MGVSCG
Trigger: TCCACAGGACACTCCCATCAAGAAGCCACCCAAACA...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAACTCCGTAATTGGTTaGCTGACTGGCATCGTTCTT +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHNSVIG*LTGIVL
Trigger: AAGAACGATGCCAGTCAGCAAACCAATTACGGAGTT...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGCTGCAAAGTCTTCTTTaGCAGCTGGTCTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQLQSLL*QLVSEI
Trigger: GATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAG...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTCTGCAAAGTCTTCTTTaGCAGCTGGTCTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: NPSCNVPKPSEFFAELLALQSLL*QLVSEI
Trigger: GATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAG...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGGCTAGCTCTAACCCCTaGGGGTTTATTTATAGGCCA +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQASSNP*GFIYRP
Trigger: TGGCCTATAAATAAACCCCAAGGGGTTAGAGCTAGC...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTCCAACTAGCAGGCATTaGCTAGCTCTAACCCCTTGG +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPPTSRH*LALTPW
Trigger: CCAAGGGGTTAGAGCTAGCAAATGCCTGCTAGTTGG...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS GCA 90 bp AAGAGAAAACAAAAGGTCGTGTGTAGTGGACAGGTGAGGAGCTATTaGCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGACAGTA +
Preference number: 5 (lower is better)
Translates to: KRKQKVVCSGQVRSY*PSVYTVNSQETWTV
Trigger: TACTGTCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTGTCCACTACACACGACCTTTTGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp CCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTCCACAAGCACATGAATaGTACCTCAATAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PSCNVPKPSEFFAELLASPQAHE*YLNKAA
Trigger: AGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGG...AGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTCTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPLSGLM*VPSLLS
Trigger: GGAAAGCAGACTTGGCACCAACATTAACCCTGACAG...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGAACTCCGTAATTGGTTaGCTGACTGGCATCGTTCTT +
Preference number: 5 (lower is better)
Translates to: QAVMYPNLLSFSLSCLLLNSVIG*LTGIVL
Trigger: AAGAACGATGCCAGTCAGCAAACCAATTACGGAGTT...CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAACTGCAAAGTCTTCTTTaGCAGCTGGTCTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKLQSLL*QLVSEI
Trigger: GATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAG...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGATTCAGATCATCAGGTaGTCTTTATTGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PKPSEFFAELLASDFHPRIQIIR*SLLARN
Trigger: GTTCCTGGCCAATAAAGACAACCTGATGATCTGAAT...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTTTGCACAGCAGCCTaGCTGAAACAGGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIFCTAA*LKQETD
Trigger: GTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAA...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000367025.8
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTAACCCTCTGGTCACTTaGCTGAGTTGGGCTGGATTT +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPNPLVT*LSWAGF
Trigger: AAATCCAGCCCAACTCAGCAAAGTGACCAGAGGGTT...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS GCA 90 bp CAGAAGCCAAGTACCTCAGGTTTTTGTGCATCAACAATGTTGGGTTaGATTGAGGCTTGTGTTTACACACTATCTAGTCCTCTCTATCAG +
Preference number: 5 (lower is better)
Translates to: QKPSTSGFCASTMLG*IEACVYTLSSPLYQ
Trigger: CTGATAGAGAGGACTAGATAGTGTGTAAACACAAGCCTCAATGCAACCCAACATTGTTGATGCACAAAAACCTGAGGTACTTGGCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CCA 90 bp TCTTTCCCTAAACGCCCTCAGAAGGAAACAACCCTGCTGACATCTTaGATTTCTAGTCTCCAGAACTGTGAGACAATACATTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SFPKRPQKETTLLTS*ISSLQNCETIHFCS
Trigger: AGAACAGAAATGTATTGTCTCACAGTTCTGGAGACTAGAAATCCAAGATGTCAGCAGGGTTGTTTCCTTCTGAGGGCGTTTAGGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTAACTCCGTAATTGGTTaGCTGACTGGCATCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSNSVIG*LTGIVL
Trigger: AAGAACGATGCCAGTCAGCAAACCAATTACGGAGTT...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: QLENPSCNVPKPSEFFAEYSSLR*SNSECS
Trigger: ACTGCATTCAGAATTAGACAACCTCAGTGACGAGTA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAYSSLR*SNSECS
Trigger: ACTGCATTCAGAATTAGACAACCTCAGTGACGAGTA...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQYSSLR*SNSECS
Trigger: ACTGCATTCAGAATTAGACAACCTCAGTGACGAGTA...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CAA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTATTCAGATCATCAGGTaGTCTTTATTGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLIQIIR*SLLARN
Trigger: GTTCCTGGCCAATAAAGACAACCTGATGATCTGAAT...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTCAGATCATCAGGTaGTCTTTATTGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EFFAELLASDFHPRQLSQIQIIR*SLLARN
Trigger: GTTCCTGGCCAATAAAGACAACCTGATGATCTGAAT...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTATTCAGATCATCAGGTaGTCTTTATTGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: NLLSFSLSCLLLIFTQGSIQIIR*SLLARN
Trigger: GTTCCTGGCCAATAAAGACAACCTGATGATCTGAAT...ACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGTTTCACCCAAGGCAGTaGTCACAAATTATTCAGATC +
Preference number: 5 (lower is better)
Translates to: PKPSEFFAELLASDFHPRFHPRQ*SQIIQI
Trigger: GATCTGAATAATTTGTGACAACTGCCTTGGGTGAAA...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAATTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: EFFAELLASDFHPRQLSQFSLSC*LLIFTQ
Trigger: TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA...TTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCATTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: VPKPSEFFAELLASDFHPFSLSC*LLIFTQ
Trigger: TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAFSLSC*LLIFTQ
Trigger: TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: KPSEFFAELLASDFHPRQEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...CTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp CCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGGAAATCCTAAGTCAGTaGGAAAACCCAAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: PKPSEFFAELLASDFHPREILSQ*ENPSCN
Trigger: ATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTC...CCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp CAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTAACACGTCCCTTCTaGGTACCGTCTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: QLENPSCNVPKPSEFFAELTRPF*VPSFFL
Trigger: CAAAAAGAAAGACGGTACCAAGAAGGGACGTGTTAA...CTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367025.8
CDS TCA 90 bp TTTGATAAGACTCACATACTCTGTCTCTTATCAAGTGGGCTGTTCTaGGCCCTGCTTCAGGAAAATTACAAAGATCAGCTTTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: FDKTHILCLLSSGLF*ALLQENYKDQLLRW
Trigger: CCACCTCAAAAGCTGATCTTTGTAATTTTCCTGAAGCAGGGCTCAGAACAGCCCACTTGATAAGAGACAGAGTATGTGAGTCTTATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS-3UTR CAA 90 bp TTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAATTACCACAAGCACATGAATaGTACCTCAATAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: FSLSCLLLIFTQGSCHKLPQAHE*YLNKAA
Trigger: AGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGG...TAATTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp CTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAGCCTGATCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LSFSLSCLLLIFTQGSCHKPDLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGATCAGGCTT...GTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGT +
Preference number: 5 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSYSSLR*SNSECS
Trigger: ACTGCATTCAGAATTAGACAACCTCAGTGACGAGTA...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
CDS-3UTR CAA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTATTCAGATCATCAGGTaGTCTTTATTGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIIQIIR*SLLARN
Trigger: GTTCCTGGCCAATAAAGACAACCTGATGATCTGAAT...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCATTTCACCCAAGGCAGTaGTCACAAATTATTCAGATC +
Preference number: 5 (lower is better)
Translates to: VPKPSEFFAELLASDFHPFHPRQ*SQIIQI
Trigger: GATCTGAATAATTTGTGACAACTGCCTTGGGTGAAA...TGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTTTCACCCAAGGCAGTaGTCACAAATTATTCAGATC +
Preference number: 5 (lower is better)
Translates to: NPSCNVPKPSEFFAELLAFHPRQ*SQIIQI
Trigger: GATCTGAATAATTTGTGACAACTGCCTTGGGTGAAA...AGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: SWKTQAVMYPNLLSFSLSFSLSC*LLIFTQ
Trigger: TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA...ACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAAGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: SFSLSCLLLIFTQGSCHKEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...TTTGTGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: KTQAVMYPNLLSFSLSCLEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...CAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS GCA 90 bp GACCTAGAAGTGACCTTAGTACAAGTTTCTTTCCCAGGAGCTAGTTaGATATCAATACTTCTGGGGATGTGTATGTTTGTGAGTATGTAC +
Preference number: 5 (lower is better)
Translates to: DLEVTLVQVSFPGAS*ISILLGMCMFVSMY
Trigger: GTACATACTCACAAACATACACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTAAGGTCACTTCTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS-3UTR CAA 90 bp TCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTCAAAGCCTGATCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SEFFAELLASDFHPRQLSKPDLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGATCAGGCTT...TGACAACTGCCTTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTAAGCCTGATCTTTCTTaGTTAAGAGTTTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: TQAVMYPNLLSFSLSCLLKPDLS*LRVSPV
Trigger: AACAGGAGAAACTCTTAACAAAGAAAGATCAGGCTT...AAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS-3UTR CAA 90 bp TACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACCCAATTTCACCCAAGGCAGTaGTCACAAATTATTCAGATC +
Preference number: 5 (lower is better)
Translates to: YPNLLSFSLSCLLLIFTQFHPRQ*SQIIQI
Trigger: GATCTGAATAATTTGTGACAACTGCCTTGGGTGAAA...TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACTTTTCGCTGAGTTGCTaGCTTCTGATTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: NVPKPSEFFAELLASDFHFSLSC*LLIFTQ
Trigger: TTGGGTGAAAATCAGAAGCAAGCAACTCAGCGAAAA...GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTGAGTTTTTCGCTGAGTaGCTTGCTTCTGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPEFFAE*LASDFH
Trigger: GTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTC...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp GCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTGAAATCCTAAGTCAGTaGGAAAACCCAAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: AVMYPNLLSFSLSCLLLIEILSQ*ENPSCN
Trigger: ATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTC...AATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS CCA 90 bp GTCTTAGTCTTGGTGAAAAGAGCATGGACTAGGAGTCAGAAGTTTTaGATTGTTGTTATAGCTGTGTTGTTAGTTTGTGTCACCATAGAC +
Preference number: 5 (lower is better)
Translates to: VLVLVKRAWTRSQKF*IVVIAVLLVCVTID
Trigger: GTCTATGGTGACACAAACTAACAACACAGCTATAACAACAATCCAAAACTTCTGACTCCTAGTCCATGCTCTTTTCACCAAGACTAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS-3UTR CAA 90 bp CTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCTTTCACCCAAGGCAGTaGTCACAAATTATTCAGATC +
Preference number: 5 (lower is better)
Translates to: LSQLENPSCNVPKPSEFFFHPRQ*SQIIQI
Trigger: GATCTGAATAATTTGTGACAACTGCCTTGGGTGAAA...GAAAAACTCAGAAGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS-3UTR CAA 90 bp AAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTGAAATCCTAAGTCAGTaGGAAAACCCAAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KSEILSQLENPSCNVPKPEILSQ*ENPSCN
Trigger: ATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTC...AGGTTTGGGTACATTACAGCTTGGGTTTTCCAACTGACTTAGGATTTCTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000471368.1
ENST00000477431.1
CDS TCA 90 bp ATGACTTTACGTGCAAGTGCTTTGCAAATGAGAGACACCGAAAAATaGAGTTCTTATAGAACAAACGACCTAGAAGTGACCTTAGTACAA +
Preference number: 5 (lower is better)
Translates to: MTLRASALQMRDTEK*SSYRTNDLEVTLVQ
Trigger: TTGTACTAAGGTCACTTCTAGGTCGTTTGTTCTATAAGAACTTCATTTTTCGGTGTCTCTCATTTGCAAAGCACTTGCACGTAAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS GCA 90 bp CAAGACTTAATGAACTCAGTACTTAGGATGGAAATTAGTAATAGATaGTGTCTTGTCATGGTCTTTAACGTGTGTCTATTGGAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: QDLMNSVLRMEISNR*CLVMVFNVCLLEVA
Trigger: AGCAACTTCCAATAGACACACGTTAAAGACCATGACAAGACAGCATCTATTACTAATTTCCATCCTAAGTACTGAGTTCATTAAGTCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS GCA 72 bp TGGGACGGCAGCGGCGGCTTTCACGGATCTCTTGCCTaGGCTCACACTTGGCCTCATAGCTCTCAGCCCACC +
Preference number: 6 (lower is better)
Translates to: WDGSGGFHGSLA*AHTWPHSSQPT
Trigger: GGTGGGCTGAGAGCTATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 72 bp TCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATTaGGACGGCAGCGGCGGCTTTCACGGATCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: SASSPPGGKWSH*DGSGGFHGSLA
Trigger: GGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 72 bp GTTGGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTaGTCACATTGGGACGGCAGCGGCGGCTTTCACGGA +
Preference number: 6 (lower is better)
Translates to: VGSSASSPPGGK*SHWDGSGGFHG
Trigger: TCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 72 bp TGCTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACCTaGCGGCAAGTGGTCACATTGGGACGGCAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CSLCWILSVFPT*RQVVTLGRQRR
Trigger: CCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CAA 72 bp CTCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTTTCACGGATCTCTTGC +
Preference number: 6 (lower is better)
Translates to: LSVFPTWRQVVT*GRQRRLSRISC
Trigger: GCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CAA 90 bp GCAAGTGGTCACATTGGGACGGCAGCGGCGGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGCCTCATAGCTCTCAGCCCACCGGGC +
Preference number: 6 (lower is better)
Translates to: ASGHIGTAAAAFTDL*PALTLGLIALSPPG
Trigger: GCCCGGTGGGCTGAGAGCTATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CAA 90 bp TGTTGGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATaGGGACGGCAGCGGCGGCTTTCACGGATCTCTTGCCTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: CWILSVFPTWRQVVT*GRQRRLSRISCLRS
Trigger: TGAGCGCAGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS TCA 72 bp TCCCCACCCCCAGTGCCTGGTACCTGCAGTTTGGACTaGAGCACGTGGAGTTGGCTCTCCAGCTCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SPPPVPGTCSLD*STWSWLSSSLC
Trigger: GCACAGGGAGCTGGAGAGCCAACTCCACGTGCTTCAGTCCAAACTGCAGGTACCAGGCACTGGGGGTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp CACATTGGGACGGCAGCGGCGGCTTTCACGGATCTCTaGCCTGCGCTCACACTTGGCCTCATAGCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: HIGTAAAAFTDL*PALTLGLIALS
Trigger: GCTGAGAGCTATGAGGCCAAGTGTGAGCGCAGGCAAGAGATCCGTGAAAGCCGCCGCTGCCGTCCCAATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CAA 90 bp CCTGAAGAACTGCTGCAGTCGAGCTCTCTGGAGCTGCTCTCTCTGTaGGATCCTCAGCGTCTTCCCCACCTGGCGGCAAGTGGTCACATT +
Preference number: 6 (lower is better)
Translates to: PEELLQSSSLELLSL*DPQRLPHLAASGHI
Trigger: AATGTGACCACTTGCCGCCAGGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS TCA 72 bp TTGTCTGAGTACCACGGTGGTGTTTGGGTGGCTTCTTaGTGGGAGTGTCCTGTGGAGGAAGGCCCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LSEYHGGVWVAS*WECPVEEGPQP
Trigger: AGGCTGGGGGCCTTCCTCCACAGGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTACTCAGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS TCA 72 bp GAGAAGAAATCCTTCTGGCACAAGACAAGGGTTCCTTaGGGACAGTCACCTGTCCTGGCCGCCTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: EKKSFWHKTRVP*GQSPVLAAWRA
Trigger: GGCCCTCCAGGCGGCCAGGACAGGTGACTGTCCTCAAGGAACCCTTGTCTTGTGCCAGAAGGATTTCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000468672.5
ENST00000478359.5
CDS GCA 72 bp CCAGCCCACAGCTCATCTCTCTGCTCTAGTAGAGGTTaGTTAGGGCTTCAGCCAATCCCCGCTGCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PAHSSSLCSSRG*LGLQPIPAALS
Trigger: TGACAGCGCAGCGGGGATTGGCTGAAGCCCTAAGCAACCTCTACTAGAGCAGAGAGATGAGCTGTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS GCA 72 bp CTCCTGAAGAACTGCTGCAGTCGAGCTCTCTGGAGCTaGTCTCTCTGTTGGATCCTCAGCGTCTTCCCCACC +
Preference number: 6 (lower is better)
Translates to: LLKNCCSRALWS*SLCWILSVFPT
Trigger: GGTGGGGAAGACGCTGAGGATCCAACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS GCA 72 bp GGCAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGTaGTGCAGCTTACGCAGGCAGGAGAGATACTCGTCA +
Preference number: 6 (lower is better)
Translates to: GSCWLWFSSSRQ*CSLRRQERYSS
Trigger: TGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000460314.1
ENST00000467830.1
ENST00000471368.1
CDS CCA 72 bp GGTGCCGGTCTGAGGTCTTCAGCTCCTGCTTCTGCGTaGTTTTCCCCTGCCTCTGATCTGCTCTCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: GAGLRSSAPASA*FSPASDLLSRN
Trigger: GTTTCTGGAGAGCAGATCAGAGGCAGGGGAAAACCACGCAGAAGCAGGAGCTGAAGACCTCAGACCGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS CAA 90 bp GAGGGCCTGGGGTCTGGGCTGATCATGATGACCTCCAAGCACCTGTaGCGCTTGGCTTCCAGTTCCTGGAATAGATGCCTGGATCTGTCA +
Preference number: 6 (lower is better)
Translates to: EGLGSGLIMMTSKHL*RLASSSWNRCLDLS
Trigger: TGACAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCCAGACCCCAGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
ENST00000479796.5
CDS GCA 72 bp CTCCTGCTTCTGCGTGGTTTTCCCCTGCCTCTGATCTaGTCTCCAGAAACACCACCACCTCACCACAGAAGC +
Preference number: 6 (lower is better)
Translates to: LLLLRGFPLPLI*SPETPPPHHRS
Trigger: GCTTCTGTGGTGAGGTGGTGGTGTTTCTGGAGAGCAGATCAGAGGCAGGGGAAAACCACGCAGAAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS GCA 72 bp TCCTGGGTATCCAAGCTGCACAGGTCTCTGTCCCCTTaGAGGCATTCAATCTTGGCCTGCAGTTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SWVSKLHRSLSP*RHSILACSCWC
Trigger: GCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000476050.5
ENST00000477431.1
ENST00000488702.1
CDS GCA 72 bp AGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGTGCTaGAGCTTACGCAGGCAGGAGAGATACTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: SCWLWFSSSRQC*SLRRQERYSSL
Trigger: CAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCAGAGCCAGCAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000460314.1
ENST00000467830.1
ENST00000471368.1
CDS CCA 72 bp CTTCTCTTCCTCCCACGACCTCATTACCCACCACCCTaGGAGGAGGGTATCTCAGCTTCACCAACTAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLFLPRPHYPPP*EEGISASPTSR
Trigger: CCTGCTAGTTGGTGAAGCTGAGATACCCTCCTCCCAGGGTGGTGGGTAATGAGGTCGTGGGAGGAAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CAA 72 bp GTCCTGGGTATCCAAGCTGCACAGGTCTCTGTCCCCTaGCAGGCATTCAATCTTGGCCTGCAGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VLGIQAAQVSVP*QAFNLGLQLLV
Trigger: CACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000476050.5
ENST00000477431.1
ENST00000488702.1
CDS GCA 72 bp TTCTCCTCTAGCTCCAGGTTCCTCCTCCTGAAGAACTaGTGCAGTCGAGCTCTCTGGAGCTGCTCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: FSSSSRFLLLKN*CSRALWSCSLC
Trigger: ACAGAGAGAGCAGCTCCAGAGAGCTCGACTGCAGCAGTTCTTCAGGAGGAGGAACCTGGAGCTAGAGGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS CCA 72 bp CTCCAACTCAAGCCACTCGGGAAAGCATTCCAGTCCTaGGCAGATCTTGGCTCTGGTCTCAGATGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: LQLKPLGKAFQS*ADLGSGLRWSK
Trigger: CTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTGAGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
ENST00000479796.5
CDS CCA 72 bp TTCTGCCTTTGTCTGAGTACCACGGTGGTGTTTGGGTaGCTTCTTGATGGGAGTGTCCTGTGGAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: FCLCLSTTVVFG*LLDGSVLWRKA
Trigger: GGCCTTCCTCCACAGGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTACTCAGACAAAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
CDS CCA 72 bp TCAAGGCCTCCAAGGAGAAGAGTACCTTGTAGGTCCTaGGTATCCAAGCTGCACAGGTCTCTGTCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: SRPPRRRVPCRS*VSKLHRSLSPC
Trigger: GCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGGTACTCTTCTCCTTGGAGGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTaGGCTAGACTGATGGCATTCTCTGACATAAAGGTT +
Preference number: 6 (lower is better)
Translates to: VGRGEGTWEGVL*ARLMAFSDIKV
Trigger: AACCTTTATGTCAGAGAATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CAA 90 bp CTGGGGTCTGGGCTGATCATGATGACCTCCAAGCACCTGTTGCGCTaGGCTTCCAGTTCCTGGAATAGATGCCTGGATCTGTCAGGGTTA +
Preference number: 6 (lower is better)
Translates to: LGSGLIMMTSKHLLR*ASSSWNRCLDLSGL
Trigger: TAACCCTGACAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCCAGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
ENST00000479796.5
CDS GCA 72 bp CTCACCACAGAAGCACCAGCCCACAGCTCATCTCTCTaGTCTAGTAGAGGTTGCTTAGGGCTTCAGCCAATC +
Preference number: 6 (lower is better)
Translates to: LTTEAPAHSSSL*SSRGCLGLQPI
Trigger: GATTGGCTGAAGCCCTAAGCAACCTCTACTAGAGCAGAGAGATGAGCTGTGGGCTGGTGCTTCTGTGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367023.5
CDS GCA 72 bp CCCACATTGCCTCTTGTAGGTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTTGCAGGCATTCAATCT +
Preference number: 6 (lower is better)
Translates to: PTLPLVGPGYPS*TGLCPLAGIQS
Trigger: AGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGAGGCAATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477431.1
CDS GCA 72 bp CCAAAAATCGCAGGGCCTGGTTCATCTGTAAGTCCCTaGTATCTGCTCCCTGTAAGGAGGAGGAAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: PKIAGPGSSVSP*YLLPVRRRKGQ
Trigger: TTGGCCCTTCCTCCTCCTTACAGGGAGCAGATAGCAGGGACTTACAGATGAACCAGGCCCTGCGATTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp GGGCTGATCATGATGACCTCCAAGCACCTGTTGCGCTaGGCTTCCAGTTCCTGGAATAGATGCCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: GLIMMTSKHLLR*ASSSWNRCLDL
Trigger: CAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGTCATCATGATCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
ENST00000479796.5
CDS CAA 72 bp GATCCTCAGCGTCTTCCCCACCTGTCAGGGTTAATGTaGGTGCCAAGTCTGCTTTCCTTAGCCCAGACACAG +
Preference number: 6 (lower is better)
Translates to: DPQRLPHLSGLM*VPSLLSLAQTQ
Trigger: CTGTGTCTGGGCTAAGGAAAGCAGACTTGGCACCAACATTAACCCTGACAGGTGGGGAAGACGCTGAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468672.5
CDS CAA 90 bp TCCAACTCAAGCCACTCGGGAAAGCATTCCAGTCCTGGGCAGATCTaGGCTCTGGTCTCAGATGGAGCAAGACAGCAGATGGGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: SNSSHSGKHSSPGQI*ALVSDGARQQMGKA
Trigger: TGCTTTACCCATCTGCTGTCTTGCTCCATCTGAGACCAGAGCCAAGATCTGCCCAGGACTGGAATGCTTTCCCGAGTGGCTTGAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
ENST00000479796.5
CDS TCA 72 bp ACATGGACAGTAGACTCTCTAGGGCTAACAGTGAGTTaGCTCTGGACTGCTATGTGGTTTGGGGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: TWTVDSLGLTVS*LWTAMWFGAGE
Trigger: CTCCCCAGCCCCAAACCACATAGCAGTCCAGAGTCAACTCACTGTTAGCCCTAGAGAGTCTACTGTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS GCA 72 bp AAGCCACAAGGTTCGCAAACCCCAGTTCCTCTCTCTTaGTCTCTGGTATCATCTAAGTGGGCCCCTGAACTC +
Preference number: 6 (lower is better)
Translates to: KPQGSQTPVPLS*SLVSSKWAPEL
Trigger: GAGTTCAGGGGCCCACTTAGATGATACCAGAGAGCAAGAGAGAGGAACTGGGGTTTGCGAACCTTGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400959.7
CDS GCA 72 bp GGAGAAGAGTACCTTGTAGGTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTTGCAGGCATTCAATCT +
Preference number: 6 (lower is better)
Translates to: GEEYLVGPGYPS*TGLCPLAGIQS
Trigger: AGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGGTACTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CCA 72 bp GTTGGGCTGGATTTGGATGAGCTGGATCCTGAGCGTTaGAAATTCTGTGTCCTGCCTCCTCTGATCACTGGA +
Preference number: 6 (lower is better)
Translates to: VGLDLDELDPER*KFCVLPPLITG
Trigger: TCCAGTGATCAGAGGAGGCAGGACACAGAATTTCCAACGCTCAGGATCCAGCTCATCCAAATCCAGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS CAA 90 bp TTCTCTGCACTCCTTTTCCTTGGCCTGGAGCTGCAAAGTCTTCTTTaGCAGCTGGTCTCTGAGATCCCAGTCTTTCTCCTTCCCTGTACC +
Preference number: 6 (lower is better)
Translates to: FSALLFLGLELQSLL*QLVSEIPVFLLPCT
Trigger: GGTACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGTGCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS CAA 90 bp CAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGTTCTCTGCACTCCTTTTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: QCCSLRRQERYSSLR*SNSECSSLHSFSLA
Trigger: GGCCAAGGAAAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS CAA 90 bp CCACCCTGGGAGGAGGGTATCTCAGCTTCACCAACTAGCAGGCATTaGCTAGCTCTAACCCCTTGGGGTTTATTTATAGGCCAAACAGAC +
Preference number: 6 (lower is better)
Translates to: PPWEEGISASPTSRH*LALTPWGLFIGQTD
Trigger: GTCTGTTTGGCCTATAAATAAACCCCAAGGGGTTAGAGCTAGCAAATGCCTGCTAGTTGGTGAAGCTGAGATACCCTCCTCCCAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CAA 90 bp CAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGTTCTCTGCACTGGGGAGAACATCAC +
Preference number: 6 (lower is better)
Translates to: QCCSLRRQERYSSLR*SNSECSSLHWGEHH
Trigger: GTGATGTTCTCCCCAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS CAA 90 bp TGCAGTTCTCTCCTTTTCCTTGGCCTGGAGCTGCAAAGTCTTCTTTaGCAGCTGGTCTCTGAGATCCCAGTCTTTCTCCTTCCCTGTACC +
Preference number: 6 (lower is better)
Translates to: CSSLLFLGLELQSLL*QLVSEIPVFLLPCT
Trigger: GGTACAGGGAAGGAGAAAGACTGGGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGAGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS GCA 72 bp CCTTGCAGGCATTCAATCTTGGCCTGCAGTTGCTGGTaGTCATTTTCCAAAAATCGCAGGGCCTGGTTCATC +
Preference number: 6 (lower is better)
Translates to: PCRHSILACSCW*SFSKNRRAWFI
Trigger: GATGAACCAGGCCCTGCGATTTTTGGAAAATGAGCACCAGCAACTGCAGGCCAAGATTGAATGCCTGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000476050.5
ENST00000477431.1
ENST00000488702.1
CDS CCA 72 bp ACCTCCAAGCACCTGTTGCGCTTGGCTTCCAGTTCCTaGAATAGATGCCTGGATCTGTCAGGGTTAATGTTG +
Preference number: 6 (lower is better)
Translates to: TSKHLLRLASSS*NRCLDLSGLML
Trigger: CAACATTAACCCTGACAGATCCAGGCATCTATTCCAGGAACTGGAAGCCAAGCGCAACAGGTGCTTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000478359.5
ENST00000479796.5
CDS CCA 72 bp TGTACCCTCAGGCTCCACTTCGTTAGGGAAGGACTTTaGACTCCACACGGGCAAAGCCTGATCTTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: CTLRLHFVREGL*TPHGQSLIFLC
Trigger: ACAAAGAAAGATCAGGCTTTGCCCGTGTGGAGTCCAAAGTCCTTCCCTAACGAAGTGGAGCCTGAGGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS CCA 72 bp CTCCTAGAACCCTCTGGTCACTTTGCTGAGTTGGGCTaGATTTGGATGAGCTGGATCCTGAGCGTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: LLEPSGHFAELG*IWMSWILSVGN
Trigger: ATTTCCAACGCTCAGGATCCAGCTCATCCAAATCCAGCCCAACTCAGCAAAGTGACCAGAGGGTTCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS CCA 72 bp GGTGATGGGAAGAAGAAAACAACAAAGGTTGAGCTGTaGATACCACGCAGAGTGACCAGCTGGGTTCACTCC +
Preference number: 6 (lower is better)
Translates to: GDGKKKTTKVEL*IPRRVTSWVHS
Trigger: GGAGTGAACCCAGCTGGTCACTCTGCGTGGTATCCACAGCTCAACCTTTGTTGTTTTCTTCTTCCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp AACATGGACAGTAGACTCTCTAGGGCTAACAGTGAGTaGACTCTGGACTGCTATGTGGTTTGGGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: NMDSRLSRANSE*TLDCYVVWGWG
Trigger: TCCCCAGCCCCAAACCACATAGCAGTCCAGAGTCAACTCACTGTTAGCCCTAGAGAGTCTACTGTCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS TCA 72 bp GTAGTTTATCCTCCTAGAACCCTCTGGTCACTTTGCTaGGTTGGGCTGGATTTGGATGAGCTGGATCCTGAG +
Preference number: 6 (lower is better)
Translates to: VVYPPRTLWSLC*VGLDLDELDPE
Trigger: CTCAGGATCCAGCTCATCCAAATCCAGCCCAACTCAGCAAAGTGACCAGAGGGTTCTAGGAGGATAAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS GCA 72 bp CTGAATGCAGTTCTCTCCTTTTCCTTGGCCTGGAGCTaGAAAGTCTTCTTTTGCAGCTGGTCTCTGAGATCC +
Preference number: 6 (lower is better)
Translates to: LNAVLSFSLAWS*KVFFCSWSLRS
Trigger: GGATCTCAGAGACCAGCTGCAAAAGAAGACTTTGCAGCTCCAGGCCAAGGAAAAGGAGAGAACTGCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CCA 72 bp AGAAGACGGCCATCTACAAAGCCAAGGAAAGAGCCCTaGGATAGATCTTTCCCTAAACGCCCTCAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: RRRPSTKPRKEP*DRSFPKRPQKE
Trigger: TTCCTTCTGAGGGCGTTTAGGGAAAGATCTATCCCAGGGCTCTTTCCTTGGCTTTGTAGATGGCCGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CAA 72 bp CACAGATTGTGCCATCCAAACCCACAAGCACATGAATaGTACCTCAATAAGGCTGCTCCTAGTCCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: HRLCHPNPQAHE*YLNKAAPSPRL
Trigger: GAGCCTGGGACTAGGAGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGGGTTTGGATGGCACAATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000468672.5
ENST00000478359.5
CDS CAA 72 bp TTTATCCTCCTAGAACCCTCTGGTCACTTTGCTGAGTaGGGCTGGATTTGGATGAGCTGGATCCTGAGCGTT +
Preference number: 6 (lower is better)
Translates to: FILLEPSGHFAE*GWIWMSWILSV
Trigger: AACGCTCAGGATCCAGCTCATCCAAATCCAGCCCAACTCAGCAAAGTGACCAGAGGGTTCTAGGAGGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS CAA 72 bp AGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGTTCTCTGCACTGGGGA +
Preference number: 6 (lower is better)
Translates to: SLRRQERYSSLR*SNSECSSLHWG
Trigger: TCCCCAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS CAA 72 bp GAGGAGGGTATCTCAGCTTCACCAACTAGCAGGCATTaGCTAGCTCTAACCCCTTGGGGTTTATTTATAGGC +
Preference number: 6 (lower is better)
Translates to: EEGISASPTSRH*LALTPWGLFIG
Trigger: GCCTATAAATAAACCCCAAGGGGTTAGAGCTAGCAAATGCCTGCTAGTTGGTGAAGCTGAGATACCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CAA 72 bp TTGCCAACAGTGGGCAATTCTGAACTGGATGCTTTTTaGGGATGGAGTTTGGAGAGTGGGTTGGGAGATGAC +
Preference number: 6 (lower is better)
Translates to: LPTVGNSELDAF*GWSLESGLGDD
Trigger: GTCATCTCCCAACCCACTCTCCAAACTCCATCCCAAAAAAGCATCCAGTTCAGAATTGCCCACTGTTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476050.5
ENST00000488702.1
CDS TCA 72 bp CTTGGTACCGTCTTTCTTTTTGCACAGCAGCCTTGCTaGAACAGGAAACAGACAAAGCCACAAGGTTCGCAA +
Preference number: 6 (lower is better)
Translates to: LGTVFLFAQQPC*NRKQTKPQGSQ
Trigger: TTGCGAACCTTGTGGCTTTGTCTGTTTCCTGTTTCAGCAAGGCTGCTGTGCAAAAAGAAAGACGGTACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367025.8
ENST00000400959.7
ENST00000478359.5
CDS GCA 72 bp TTTTTAGTTGATCTTGTAGGTCCTGGGTATCCAAGCTaGACAGGTCTCTGTCCCCTTGCAGGCATTCAATCT +
Preference number: 6 (lower is better)
Translates to: FLVDLVGPGYPS*TGLCPLAGIQS
Trigger: AGATTGAATGCCTGCAAGGGGACAGAGACCTGTGCAGCTTGGATACCCAGGACCTACAAGATCAACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367023.5
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
ENST00000400959.7
ENST00000488702.1
CDS GCA 72 bp CAAAAGGTCGTGTGTAGTGGACAGGTGAGGAGCTATTaGCCCTCTGTATACACAGTGAATTCTCAGGAAACA +
Preference number: 6 (lower is better)
Translates to: QKVVCSGQVRSY*PSVYTVNSQET
Trigger: TGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTGTCCACTACACACGACCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CCA 72 bp AGTGAGTTGACTCTGGACTGCTATGTGGTTTGGGGCTaGGGAGTTGGATGTGATTTGGAAAATCAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: SELTLDCYVVWG*GVGCDLENQVC
Trigger: ACACACTTGATTTTCCAAATCACATCCAACTCCCCAGCCCCAAACCACATAGCAGTCCAGAGTCAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CCA 72 bp GCTAACAGTGAGTTGACTCTGGACTGCTATGTGGTTTaGGGCTGGGGAGTTGGATGTGATTTGGAAAATCAA +
Preference number: 6 (lower is better)
Translates to: ANSELTLDCYVV*GWGVGCDLENQ
Trigger: TTGATTTTCCAAATCACATCCAACTCCCCAGCCCCAAACCACATAGCAGTCCAGAGTCAACTCACTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CCA 72 bp GTGTGCCAAATCCTGAGCTGGGTACAGGTGTATAGCTaGTTTTCTAAGGATCTCAGTTTCCCCTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: VCQILSWVQVYS*FSKDLSFPFSL
Trigger: CAAACTGAAGGGGAAACTGAGATCCTTAGAAAACCAGCTATACACCTGTACCCAGCTCAGGATTTGGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487271.5
CDS CAA 72 bp AGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGTTCTCTGCACTCCTTT +
Preference number: 6 (lower is better)
Translates to: SLRRQERYSSLR*SNSECSSLHSF
Trigger: AAAGGAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367024.5
ENST00000367025.8
ENST00000367026.7
CDS CAA 72 bp CAACTGACCTTTCCCTTTCAAATTAGGACTGTGGCCTaGACATATGTGACTGATGTGGGAGCAGCTGTGATC +
Preference number: 6 (lower is better)
Translates to: QLTFPFQIRTVA*TYVTDVGAAVI
Trigger: GATCACAGCTGCTCCCACATCAGTCACATATGTCAAGGCCACAGTCCTAATTTGAAAGGGAAAGGTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS TCA 72 bp CTATCTAGTCCTCTCTATCAGCGGACACAGAGGATGTaGCTGAGAGACTTTCTCTATGCCTTGTGTTTCAAC +
Preference number: 6 (lower is better)
Translates to: LSSPLYQRTQRM*LRDFLYALCFN
Trigger: GTTGAAACACAAGGCATAGAGAAAGTCTCTCAGTCACATCCTCTGTGTCCGCTGATAGAGAGGACTAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS GCA 72 bp GAGAGATACTCGTCACTGAGGTTGTCTAATTCTGAATaGAGTTCTCTGCACTGGGGAGAACATCACCAAAGT +
Preference number: 6 (lower is better)
Translates to: ERYSSLRLSNSE*SSLHWGEHHQS
Trigger: ACTTTGGTGATGTTCTCCCCAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS CCA 72 bp TCACCAACTAGCAGGCATTTGCTAGCTCTAACCCCTTaGGGTTTATTTATAGGCCAAACAGACTCAACAGGT +
Preference number: 6 (lower is better)
Translates to: SPTSRHLLALTP*GLFIGQTDSTG
Trigger: ACCTGTTGAGTCTGTTTGGCCTATAAATAAACCCCAAGGGGTTAGAGCTAGCAAATGCCTGCTAGTTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367024.5
CDS CAA 72 bp AGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTaGTCTAATTCTGAATGCAGTTCTCTGCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: SLRRQERYSSLR*SNSECSSLHFL
Trigger: AAGAAAGTGCAGAGAACTGCATTCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471368.1
CDS GCA 72 bp CCAAAAATCGCAGGGCCTGGTTCATCTGTAAGTCCCTaGTATCTGCTCCCTGTAAATAAATTAGTGACATTC +
Preference number: 6 (lower is better)
Translates to: PKIAGPGSSVSP*YLLPVNKLVTF
Trigger: GAATGTCACTAATTTATTTACAGGGAGCAGATAGCAGGGACTTACAGATGAACCAGGCCCTGCGATTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488702.1
CDS CCA 72 bp AAACGCCCTCAGAAGGAAACAACCCTGCTGACATCTTaGATTTCTAGTCTCCAGAACTGTGAGACAATACAT +
Preference number: 6 (lower is better)
Translates to: KRPQKETTLLTS*ISSLQNCETIH
Trigger: ATGTATTGTCTCACAGTTCTGGAGACTAGAAATCCAAGATGTCAGCAGGGTTGTTTCCTTCTGAGGGCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CAA 90 bp GTAAACCAGAAGCCAAGTACCTCAGGTTTTTGTGCATCAACAATGTaGGGTTGCATTGAGGCTTGTGTTTACACACTATCTAGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: VNQKPSTSGFCASTM*GCIEACVYTLSSPL
Trigger: GAGAGGACTAGATAGTGTGTAAACACAAGCCTCAATGCAACCCAACATTGTTGATGCACAAAAACCTGAGGTACTTGGCTTCTGGTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS TCA 72 bp AGGTTAAAGTGGTGGGCAACCAGCAGCTGTATTAATTaGGTCAGGTTCTCCAGCTTTTCAGAAACTGCTTTT +
Preference number: 6 (lower is better)
Translates to: RLKWWATSSCIN*VRFSSFSETAF
Trigger: AAAAGCAGTTTCTGAAAAGCTGGAGAACCTGACTCAATTAATACAGCTGCTGGTTGCCCACCACTTTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS TCA 72 bp ACTCACATACTCTGTCTCTTATCAAGTGGGCTGTTCTaGGCCCTGCTTCAGGAAAATTACAAAGATCAGCTT +
Preference number: 6 (lower is better)
Translates to: THILCLLSSGLF*ALLQENYKDQL
Trigger: AAGCTGATCTTTGTAATTTTCCTGAAGCAGGGCTCAGAACAGCCCACTTGATAAGAGACAGAGTATGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp CACAGATTGTGCCATCCAAACCCACAAGCACATGAATaGTACCTCAATAAGGCTGCTTCTGTAGTTTATCCT +
Preference number: 6 (lower is better)
Translates to: HRLCHPNPQAHE*YLNKAASVVYP
Trigger: AGGATAAACTACAGAAGCAGCCTTATTGAGGTACAATTCATGTGCTTGTGGGTTTGGATGGCACAATCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367024.5
ENST00000479796.5
CDS CAA 72 bp CATCTTCCCTTCCCAGCCATTCTCAGGGATTTGAGTTaGTCTTTTGACTGTCTTACATTGTCTGGAATGTGT +
Preference number: 6 (lower is better)
Translates to: HLPFPAILRDLS*SFDCLTLSGMC
Trigger: ACACATTCCAGACAATGTAAGACAGTCAAAAGACAAACTCAAATCCCTGAGAATGGCTGGGAAGGGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS TCA 72 bp CGTGCAAGTGCTTTGCAAATGAGAGACACCGAAAAATaGAGTTCTTATAGAACAAACGACCTAGAAGTGACC +
Preference number: 6 (lower is better)
Translates to: RASALQMRDTEK*SSYRTNDLEVT
Trigger: GGTCACTTCTAGGTCGTTTGTTCTATAAGAACTTCATTTTTCGGTGTCTCTCATTTGCAAAGCACTTGCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS GCA 72 bp GTGACCTTAGTACAAGTTTCTTTCCCAGGAGCTAGTTaGATATCAATACTTCTGGGGATGTGTATGTTTGTG +
Preference number: 6 (lower is better)
Translates to: VTLVQVSFPGAS*ISILLGMCMFV
Trigger: CACAAACATACACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTAAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467830.1
CDS CAA 72 bp TCTGAGCTCCTTGAGGGCAAGATTGGGATCTTTTCTTaGTATCCCCAGTCTTATCTAGTGCTAGATAGTTTT +
Preference number: 6 (lower is better)
Translates to: SELLEGKIGIFS*YPQSYLVLDSF
Trigger: AAAACTATCTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAAGGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CAA 72 bp AAGCCAAGTACCTCAGGTTTTTGTGCATCAACAATGTaGGGTTGCATTGAGGCTTGTGTTTACACACTATCT +
Preference number: 6 (lower is better)
Translates to: KPSTSGFCASTM*GCIEACVYTLS
Trigger: AGATAGTGTGTAAACACAAGCCTCAATGCAACCCAACATTGTTGATGCACAAAAACCTGAGGTACTTGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS TCA 72 bp GATGAATATTCCAGCCAGTTCTTTTCATTTGGGTGGTaGTGGTGTCATTCCAATGAACGCTTAGTTCATTTG +
Preference number: 6 (lower is better)
Translates to: DEYSSQFFSFGW*WCHSNERLVHL
Trigger: CAAATGAACTAAGCGTTCATTGGAATGACACCATCACCACCCAAATGAAAAGAACTGGCTGGAATATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476050.5
ENST00000488702.1
CDS CCA 72 bp GACAATACATTTCTGTTCTTCAAGGCACCCAGTCTGTaGTACTTTGCTATGAATATAGCATCCTTATATCTC +
Preference number: 6 (lower is better)
Translates to: DNTFLFFKAPSL*YFAMNIASLYL
Trigger: GAGATATAAGGATGCTATATTCATAGCAAAGTACCACAGACTGGGTGCCTTGAAGAACAGAAATGTATTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CCA 72 bp TTGGTGAAAAGAGCATGGACTAGGAGTCAGAAGTTTTaGATTGTTGTTATAGCTGTGTTGTTAGTTTGTGTC +
Preference number: 6 (lower is better)
Translates to: LVKRAWTRSQKF*IVVIAVLLVCV
Trigger: GACACAAACTAACAACACAGCTATAACAACAATCCAAAACTTCTGACTCCTAGTCCATGCTCTTTTCACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS CAA 90 bp GCATGGACTAGGAGTCAGAAGTTTTGGATTGTTGTTATAGCTGTGTaGTTAGTTTGTGTCACCATAGACTTTCATGTTCTTATCCATACT +
Preference number: 6 (lower is better)
Translates to: AWTRSQKFWIVVIAV*LVCVTIDFHVLIHT
Trigger: AGTATGGATAAGAACATGAAAGTCTATGGTGACACAAACTAACAACACAGCTATAACAACAATCCAAAACTTCTGACTCCTAGTCCATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460314.1
CDS TCA 72 bp CATGGATCATCTTACTTAATACTCAGAACCACCTTATaGTGTAGGTACTATTATCCTCATTTTAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: HGSSYLILRTTL*CRYYYPHFRDG
Trigger: CCCATCTCTAAAATGAGGATAATAGTACCTACATCATAAGGTGGTTCTGAGTATTAAGTAAGATGATCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476050.5
CDS CAA 72 bp GAAGTTTTGGATTGTTGTTATAGCTGTGTTGTTAGTTaGTGTCACCATAGACTTTCATGTTCTTATCCATAC +
Preference number: 6 (lower is better)
Translates to: EVLDCCYSCVVS*CHHRLSCSYPY
Trigger: GTATGGATAAGAACATGAAAGTCTATGGTGACACAAACTAACAACACAGCTATAACAACAATCCAAAACTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460314.1