Pregenerated sensors for TPSG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000116176Ensembl transcript IDs: ENST00000234798.4
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAAGGCGGAGGCTGGCCTaGCATGGCCATGCGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGRRRLA*HGHAPA Trigger: GGCCGGCGCATGGCCATGGCAGGCCAGCCTCCGCCT...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGACCCGCCGCACACGTaGACCCTCCGCAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGDPPHT*TLRRRR Trigger: CCTCCGCCTGCGGAGGGTGCACGTGTGCGGCGGGTC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACTGGGGGCTGAGCAGTaGCCCGCCGCACACGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGLGAEQ*PAAHVH Trigger: GTGCACGTGTGCGGCGGGTCACTGCTCAGCCCCCAG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGCACCCACTGGGGGCTaGGCAGTGACCCGCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGAPTGG*AVTRRT Trigger: TGTGCGGCGGGTCACTGCTCAGCCCCCAGTGGGTGC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGGGCGATGTCCCCGCTaGTCCCCGGCTGTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGGRCPR*SPAVLR Trigger: CCTCAGGACAGCCGGGGACCAGCGGGGACATCGCCC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAAGACTCCCGGCCTGTTaGGGCGGCCGCAGCCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGRLPAC*GGRSPH Trigger: GTGAGGGCTGCGGCCGCCCCAACAGGCCGGGAGTCT...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGGTCCCCGGCTGTCCTaGGGGGCTGGAGTGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGGPRLS*GAGVQD Trigger: ATCCTGCACTCCAGCCCCTCAGGACAGCCGGGGACC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACACAGCATGTCGGGCTaGAGGATGCTGCCCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGHSMSG*RMLPPG Trigger: CCCCGGGGGCAGCATCCTTCAGCCCGACATGCTGTG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACCTGCATCCGAAACCTaGGGCCGGCCACACCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGPASET*GRPHPG Trigger: GCCAGGGTGTGGCCGGCCGCAGGTTTCGGATGCAGG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACACGATCCGGCCGCCTaGATCCGAAACCTGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGHDPAA*IRNLRP Trigger: CGGCCGCAGGTTTCGGATGCAGGCGGCCGGATCGTG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGATGTCGGGCTGAAGGATaGTGCCCCCGGGGCCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGCRAEG*CPRGRD Trigger: ATCCCGGCCCCGGGGGCAGCATCCTTCAGCCCGACA...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACGGGCAGGATCCGGCTaGAGAGGGTCACGGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGRAGSG*RGSRGH Trigger: GTGTCCCCGTGACCCTCTCCAGCCGGATCCTGCCCG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACAGGCTGTACGGGGGTaGCAGAGGCTCTCCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGQAVRG*QRLSLP Trigger: CGGGAGGGAGAGCCTCTGCCACCCCCGTACAGCCTG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACGGCCGGCCACACCCTaGCTGCAAAGTCCTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGRPATP*LQSPEG Trigger: TCCCTCAGGACTTTGCAGCCAGGGTGTGGCCGGCCG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGCTGTGAGCACCCACTaGGGGCTGAGCAGTGACCCG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGAVSTH*GLSSDP Trigger: CGGGTCACTGCTCAGCCCCCAGTGGGTGCTCACAGC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACCAGGAGGGGGAGCCTaGGGTACCCAGACTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGPGGGA*GTQTLS Trigger: GCTCAGAGTCTGGGTACCCCAGGCTCCCCCTCCTGG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACTGGCTGCAAAGTCCTaGGGGACACACCGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGLAAKS*GTHRAQ Trigger: CTGTGCCCGGTGTGTCCCTCAGGACTTTGCAGCCAG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAAGCCCCCTGATGCTGTaGTGTGGCGGCGGATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGSPLML*CGGGSS Trigger: ACTGGATCCGCCGCCACATCACAGCATCAGGGGGCT...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACTCACAGTGCCAGCCTaGACCCAGGCACCGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGLTVPA*TQAPFT Trigger: GGTGAACGGTGCCTGGGTGCAGGCTGGCACTGTGAG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACCATCCGCAGATGGGTaGAGCAGGCACTTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGPSADG*SRHLAS Trigger: GCTGGCCAAGTGCCTGCTGCACCCATCTGCGGATGG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAGGCTGGAGTGCAGGATaGTCTGCCTCACGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGGWSAG*SASRWR Trigger: TCTCCACCGTGAGGCAGATCATCCTGCACTCCAGCC...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACGGCCACACCCTGGCTaGAAAGTCCTGAGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGRPHPG*KVLRDT Trigger: TGTGTCCCTCAGGACTTTGCAGCCAGGGTGTGGCCG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACACCTGGTAGTCGGATaGGTTCAGGGACCCGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGHLVVG*VQGPGE Trigger: TTCTCCGGGTCCCTGAACTCATCCGACTACCAGGTG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACCTGATGCTGTGATGTaGCGGCGGATCCAGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGPDAVM*RRIQFT Trigger: CGTGAACTGGATCCGCCGCCACATCACAGCATCAGG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAAGTACCATCCGCAGATaGGTGCAGCAGGCACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGSTIRR*VQQALG Trigger: GCCAAGTGCCTGCTGCACCCATCTGCGGATGGTACT...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGACTCACGGTGGAGAAGTaGGGAGACAGAGTGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGLTVEK*GDRVIS Trigger: GGAGATCACTCTGTCTCCCCACTTCTCCACCGTGAG...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGATTTAAGAAATGCACTTaGATTCCTGCCATCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGFKKCT*IPAISQ Trigger: CTGACTGATGGCAGGAATCCAAGTGCATTTCTTAAA...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTTAAATGTTGCAATAATCTGATGCAGAAGACTCAGCTTCTCAAGGGAAACTTATTTAAGAAATaGACTTGGATTCCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: IQVKCCNNLMQKTQLLKGNLFKK*TWIPAI Trigger: GATGGCAGGAATCCAAGTGCATTTCTTAAATAAGTT...TCCCTTGAGAAGCTGAGTCTTCTGCATCAGATTATTGCAACATTTAACCTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS CCA 90 bp | GGGCGGGGAAGGGAGTACCATCCGCAGATGGGTGCAGCAGGCACTTaGCCAGCAGGACACAGGAGACTAGCAGAAGGAAGAGGCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GRGREYHPQMGAAGT*PAGHRRLAEGRGRG Trigger: TCCCCGGCCTCTTCCTTCTGCTAGTCTCCTGTGTCCTGCTGGCCAAGTGCCTGCTGCACCCATCTGCGGATGGTACTCCCTTCCCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS GCA 90 bp | TGCCATCAGTCAGGGGCGGGGAAGGGAGTACCATCCGCAGATGGGTaGAGCAGGCACTTGGCCAGCAGGACACAGGAGACTAGCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: CHQSGAGKGVPSADG*SRHLASRTQETSRR Trigger: CCTTCTGCTAGTCTCCTGTGTCCTGCTGGCCAAGTGCCTGCTGCACCCATCTGCGGATGGTACTCCCTTCCCCGCCCCTGACTGATGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS TCA 72 bp | GCCTGGGGTACCCAGACTCTGAGCCCCCTGATGCTGTaGTGTGGCGGCGGATCCAGTTCACGTAGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: AWGTQTLSPLML*CGGGSSSRRQG Trigger: TCCCTGCCTACGTGAACTGGATCCGCCGCCACATCACAGCATCAGGGGGCTCAGAGTCTGGGTACCCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS GCA 72 bp | TCAGGGGCGGGGAAGGGAGTACCATCCGCAGATGGGTaGAGCAGGCACTTGGCCAGCAGGACACAGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: SGAGKGVPSADG*SRHLASRTQET Trigger: AGTCTCCTGTGTCCTGCTGGCCAAGTGCCTGCTGCACCCATCTGCGGATGGTACTCCCTTCCCCGCCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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| CDS GCA 72 bp | GGGCGGAGCGGAATAAATAGTAACTTATTTAAGAAATaGACTTGGATTCCTGCCATCAGTCAGGGGCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GRSGINSNLFKK*TWIPAISQGRG Trigger: TCCCCGCCCCTGACTGATGGCAGGAATCCAAGTGCATTTCTTAAATAAGTTACTATTTATTCCGCTCCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234798.4 |
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