RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPPP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000179636

Ensembl transcript IDs: ENST00000321760.11, ENST00000460647.6, ENST00000472458.5, ENST00000481535.5, ENST00000495665.2, ENST00000525425.2, ENST00000529496.1, ENST00000530140.6, ENST00000532060.1, ENST00000533755.5, ENST00000534434.2, ENST00000555751.1

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCCATCCTGTTCTTGGAAGCAGCTGTTGAGGAGGAATGCTAACTaGTGGCTGGTAGGCATAAGGCTAAGCAGAGCGAAGGGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: LPSCSWKQLLRRNAN*WLVGIRLSRAKGVW
Trigger: CCACACACCCTTCGCTCTGCTTAGCCTTATGCCTACCAGCCATCAGTTAGCATTCCTCCTCAACAGCTGCTTCCAAGAACAGGATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR CCA 90 bp CTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTaGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: LSTLVGSSVPHRQRF*LLHTQMFIVFQAPW
Trigger: CCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CCA 90 bp TCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCGCCTCCCCGTAGCTaGGATTGGGGAGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: SWSVSLKSLDLNHHAGPPPPPRS*DWGGGG
Trigger: CCCTCCACCTCCCCAATCCCAGCTACGGGGAGGCGG...AGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
3UTR-3UTR CCA 90 bp AGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTGAGTCTTACTGGAGTTaGAGTGTGTGTGCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: SVCAVQARREHPHVPGTGESYWS*SVCAVQ
Trigger: CTGGACAGCACACACACTCCAACTCCAGTAAGACTC...ACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR-3UTR GCA 90 bp AGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTGTGCAGTTTGTAAGCTaGAGAGGCAGGATTCAATTC +
Preference number: 2 (lower is better)
Translates to: SVCAVQARREHPHVPGTGVQFVS*RGRIQF
Trigger: GAATTGAATCCTGCCTCTGCAGCTTACAAACTGCAC...ACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR-3UTR CCA 90 bp GCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATCCGCCTCCCCGTAGCTaGGATTGGGGAGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: AGFNSWSVSLKSLDLNHHPPPRS*DWGGGG
Trigger: CCCTCCACCTCCCCAATCCCAGCTACGGGGAGGCGG...ATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
3UTR-3UTR TCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTCTTGGAAGCAGCTGTTaGGGAGGAATGCTAACTGAT +
Preference number: 2 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPLGSSC*GGMLTD
Trigger: ATCAGTTAGCATTCCTCCTCAACAGCTGCTTCCAAG...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR GCA 90 bp AGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCGAGTTGGAGTGTGTGTaGTGTCCAGGCGAGACGAGA +
Preference number: 2 (lower is better)
Translates to: RQDSIPGLFHSKALILTTELECV*CPGETR
Trigger: TCTCGTCTCGCCTGGACAGCACACACACTCCAACTC...GGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR-3UTR CCA 90 bp GAGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCTGGGATTGGGGAGGTaGAGGGGTCTAGGATCACTT +
Preference number: 2 (lower is better)
Translates to: EAGFNSWSVSLKSLDLNHLGLGR*RGLGSL
Trigger: AAGTGATCCTAGACCCCTCCACCTCCCCAATCCCAG...GTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
3UTR-3UTR CCA 90 bp CAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTCTAAAAACTCTTGATGCAGGATTCAATTCCTaGTCTGTTTCACTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: QARREHPHVPGTGLKTLDAGFNS*SVSLKS
Trigger: GCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC...ATCAAGAGTTTTTAGACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR CAA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTaGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: SLYTSRLICPSQTEI*AAAHTDVYCFPSSL
Trigger: CAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CCA 90 bp ATGAAACAAGGAAGCTTTCAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTCTGGGATTGGGGAGGTaGAGGGGTCTAGGATCACTT +
Preference number: 2 (lower is better)
Translates to: MKQGSFQWFRKQIDGVQFLGLGR*RGLGSL
Trigger: AAGTGATCCTAGACCCCTCCACCTCCCCAATCCCAG...AAACTGCACACCATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
3UTR-3UTR TCA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATAAGGAGGAATGCTAACTaGTGGCTGGTAGGCATAAGG +
Preference number: 2 (lower is better)
Translates to: TSSRYFYLHIWFISLLQIRRNAN*WLVGIR
Trigger: CCTTATGCCTACCAGCCATCAGTTAGCATTCCTCCT...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR GCA 90 bp ATGAAACAAGGAAGCTTTCAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTCACTTTCAGGTTTCTTaGATAGGTAACCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: MKQGSFQWFRKQIDGVQFHFQVS*IGNQGN
Trigger: GTTTCCCTGGTTACCTATGCAAGAAACCTGAAAGTG...AAACTGCACACCATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTGTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555751.1
3UTR-3UTR TCA 90 bp ATGAAACAAGGAAGCTTTCAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTGAGATATATTTGAGTTaGGTCTTACTGGAGTTGGAG +
Preference number: 2 (lower is better)
Translates to: MKQGSFQWFRKQIDGVQFEIYLS*VLLELE
Trigger: CTCCAACTCCAGTAAGACTCAACTCAAATATATCTC...AAACTGCACACCATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTGTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR CCA 72 bp CTGGTAGGCATAAGGCTAAGCAGAGCGAAGGGTGTGTaGTGGAGAACCCACCCTCCTGTGCTGCCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: LVGIRLSRAKGV*WRTHPPVLPLL
Trigger: GAGAAGAGGCAGCACAGGAGGGTGGGTTCTCCACCACACACCCTTCGCTCTGCTTAGCCTTATGCCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CAA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTGTTCTGGGCTGGGTGTaGAAAATAGACTCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPVLGWV*KIDSPL
Trigger: AAGGGGAGAGTCTATTTTCAACACCCAGCCCAGAAC...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CAA 90 bp CTGGTAGGCATAAGGCTAAGCAGAGCGAAGGGTGTGTGGTGGAGAACCCACCCTACACACAGATGTTTATaGTTTTCCAAGCTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: LVGIRLSRAKGVWWRTHPTHRCL*FSKLPG
Trigger: ACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGT...AGGGTGGGTTCTCCACCACACACCCTTCGCTCTGCTTAGCCTTATGCCTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CAA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTTCACAGACAGAGATTTaGGCTGCTGCACACACAGAT +
Preference number: 3 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPSQTEI*AAAHTD
Trigger: ATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGA...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR TCA 72 bp TGTTCTTGGAAGCAGCTGTTGAGGAGGAATGCTAACTaGTGGCTGGTAGGCATAAGGCTAAGCAGAGCGAAG +
Preference number: 3 (lower is better)
Translates to: CSWKQLLRRNAN*WLVGIRLSRAK
Trigger: CTTCGCTCTGCTTAGCCTTATGCCTACCAGCCATCAGTTAGCATTCCTCCTCAACAGCTGCTTCCAAGAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR CCA 72 bp CTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTaGCTGCTGCACACACAGATGTTTATTGTTTTCCAA +
Preference number: 3 (lower is better)
Translates to: LVGSSVPHRQRF*LLHTQMFIVFQ
Trigger: TTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR-3UTR CAA 90 bp TTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGATTCAATTTCACTCAAAAGCCTaGATCTTAACCACCATGCAG +
Preference number: 3 (lower is better)
Translates to: FRKQIDGVQFVSCRGRIQFHSKA*ILTTMQ
Trigger: CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAA...TTGAATCCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
3UTR-3UTR CAA 90 bp CCTCATGAACAGATGAAACAAGGAAGCTTTCAGTGGTTTCGTAAACAGATAGATTTTCACTCAAAAGCCTaGATCTTAACCACCATGCAG +
Preference number: 3 (lower is better)
Translates to: PHEQMKQGSFQWFRKQIDFHSKA*ILTTMQ
Trigger: CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAA...ATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTGTTTCATCTGTTCATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp CTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGGGGAGGTCCGCCTCCCCGTAGCTaGGATTGGGGAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LDLNHHAGPPPRSWDWGGPPPRS*DWGGGG
Trigger: CCCTCCACCTCCCCAATCCCAGCTACGGGGAGGCGG...ACCTCCCCAATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp TTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGGGGAGGTGAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LILTTMQDRLPVAGIGEVSASGG*VFALHE
Trigger: CTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCT...CACCTCCCCAATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCCTGGACTCTTCCCTTTaGAGCGCTTCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPHVPGLDSSL*SASGPV
Trigger: AACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAG...GCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CCA 90 bp CTGGTAGGCATAAGGCTAAGCAGAGCGAAGGGTGTGTGGTGGAGAACCCACCCTAGAGTACCCGGATGGTaGTCTGACCCTTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LVGIRLSRAKGVWWRTHPRVPGW*SDPSRP
Trigger: AGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCT...AGGGTGGGTTCTCCACCACACACCCTTCGCTCTGCTTAGCCTTATGCCTACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGCGGGGAGGGCAGTCGTaGGAGACACTTGGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLRGGQS*ETLGGE
Trigger: TTCACCCCCAAGTGTCTCCCACGACTGCCCTCCCCG...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGSASGG*VFALHE
Trigger: CTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCT...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCCTGGGATTGGGGAGGTaGAGGGGTCTAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPHVPGLGLGR*RGLGSL
Trigger: AAGTGATCCTAGACCCCTCCACCTCCCCAATCCCAG...GCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR TCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTACCCGGATGGTGGTCTaGCCCTTCCCGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPTRMVV*PFPAFV
Trigger: TACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGT...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGCTGGACTCTTCCCTTTaGAGCGCTTCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWLDSSL*SASGPV
Trigger: AACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAG...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR GCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGGAGTTGGAGTGTGTGTaGTGTCCAGGCGAGACGAGA +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWELECV*CPGETR
Trigger: TCTCGTCTCGCCTGGACAGCACACACACTCCAACTC...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTCCTTTGAAGCGCTTCTaGCCCAGTTCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGPLKRF*PSSFTA
Trigger: GGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGG...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGAGAGCGAAGGGTGTGTaGTGGAGAACCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLRAKGV*WRTHPP
Trigger: AGGAGGGTGGGTTCTCCACCACACACCCTTCGCTCT...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGCCTCTTTGAACTGTTaGAACGTGATGGTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGASLNC*NVMVRA
Trigger: CGCCCGAACCATCACGTTTCAACAGTTCAAAGAGGC...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR TCA 90 bp CTGGTAGGCATAAGGCTAAGCAGAGCGAAGGGTGTGTGGTGGAGAACCCACCCTGCTAGCAGGCTGAGATaGAGCTCCTCTCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: LVGIRLSRAKGVWWRTHPASRLR*SSSLLG
Trigger: ACCAAGTAGAGAGGAGCTTCATCTCAGCCTGCTAGC...AGGGTGGGTTCTCCACCACACACCCTTCGCTCTGCTTAGCCTTATGCCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTAGGGGGCTAGCAGGCTaGGATGAAGCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPRGLAG*DEAPLY
Trigger: GTAGAGAGGAGCTTCATCTCAGCCTGCTAGCCCCCT...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGGGTGCCGGTGTACTTaGTGGTGTCTGTCAAACGGT +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLGCRCT*WCLSNG
Trigger: ACCGTTTGACAGACACCAGCAAGTACACCGGCACCC...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTGGAATCCTGGCAGCCTaGCTCATCTGGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPGILAA*LIWPSS
Trigger: GGAAGATGGCCAGATGAGGCAGGCTGCCAGGATTCC...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRSASGG*VFALHE
Trigger: CTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCT...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGGCGAAGGGTGTGTGGTaGAGAACCCACCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRAKGVW*RTHPPV
Trigger: CACAGGAGGGTGGGTTCTCCACCACACACCCTTCGC...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGCTGTCTTGCCATCCATaGTGCCACAGTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWLSCHP*CHSLCT
Trigger: TGTGCAAAGACTGTGGCATCATGGATGGCAAGACAG...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR TCA 90 bp TGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTCTAAAAACCTGTCTTGCCATCCATaGTGCCACAGTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CCPGETRASTCAGHWSKNLSCHP*CHSLCT
Trigger: TGTGCAAAGACTGTGGCATCATGGATGGCAAGACAG...GTTTTTAGACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR TCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGCCTCTTTGAACTGTTaGAACGTGATGGTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLASLNC*NVMVRA
Trigger: CGCCCGAACCATCACGTTTCAACAGTTCAAAGAGGC...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR TCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTCTGGACTCTTCCCTTTaGAGCGCTTCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPLDSSL*SASGPV
Trigger: AACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAG...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp TCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTCTGGACTCTTCCCTTTaGAGCGCTTCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SKALILTTMQDRLPVAGILDSSL*SASGPV
Trigger: AACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAG...AATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp CTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGGGGAGGTGGTCTTTGCCCTCCATaGGTCCATAAATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LDLNHHAGPPPRSWDWGGGLCPP*VHKCSP
Trigger: TGGAGAACATTTATGGACTCATGGAGGGCAAAGACC...ACCTCCCCAATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGCTAGCAGGCTGAGATaGAGCTCCTCTCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLASRLR*SSSLLG
Trigger: ACCAAGTAGAGAGGAGCTTCATCTCAGCCTGCTAGC...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR TCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGAGGGGGCTAGCAGGCTaGGATGAAGCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRRGLAG*DEAPLY
Trigger: GTAGAGAGGAGCTTCATCTCAGCCTGCTAGCCCCCT...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTCGGGGAGGGCAGTCGTaGGAGACACTTGGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAARGGQS*ETLGGE
Trigger: TTCACCCCCAAGTGTCTCCCACGACTGCCCTCCCCG...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGCCTCTGATGCCATaGTCAGCTAGAGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRLPLMP*SARGRG
Trigger: TCCCCGACCTCTAGCTGACCATGGCATCAGAGGCAG...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp GGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCCCTTTGAAGCGCTTCTaGCCCAGTTCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLFHSKALILTTMQDRLPPLKRF*PSSFTA
Trigger: GGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGG...GGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGCTTCCATCCTGTTCTTaGAAGCAGAGTAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWLPSCS*KQSSAS
Trigger: ACTGGCGCTACTCTGCTTCCAAGAACAGGATGGAAG...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGGAGTCTTACTGGAGTTaGAGTGTGTGTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWESYWS*SVCAVQ
Trigger: CTGGACAGCACACACACTCCAACTCCAGTAAGACTC...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp TCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTCTGGGATTGGGGAGGTaGAGGGGTCTAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SKALILTTMQDRLPVAGILGLGR*RGLGSL
Trigger: AAGTGATCCTAGACCCCTCCACCTCCCCAATCCCAG...AATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGCTGTCTTGCCATCCATaGTGCCACAGTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLLSCHP*CHSLCT
Trigger: TGTGCAAAGACTGTGGCATCATGGATGGCAAGACAG...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR TCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGACTCTTCCCTTTaGAGCGCTTCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRLDSSL*SASGPV
Trigger: AACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAG...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR TCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGGTCTTTGCCCTCCATaGGTCCATAAATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGGLCPP*VHKCSP
Trigger: TGGAGAACATTTATGGACTCATGGAGGGCAAAGACC...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR GCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCTCATTTCAGTGCCACTaGTTGATGATTCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPHVPGSFQCH*LMILQT
Trigger: CGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGA...GCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCCTTTGAAGCGCTTCTaGCCCAGTTCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRPLKRF*PSSFTA
Trigger: GGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGG...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAASASGG*VFALHE
Trigger: CTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCT...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTTCAGGCAACCTTAGCTaGCTTCTACTCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPSGNLS*LLLLHP
Trigger: TGGGTGGAGGAGTAGAAGCCAGCTAAGGTTGCCTGA...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGATTCAACCGCCTCCCCGTAGCTaGGATTGGGGAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FRKQIDGVQFVSCRGRIQPPPRS*DWGGGG
Trigger: CCCTCCACCTCCCCAATCCCAGCTACGGGGAGGCGG...TTGAATCCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp CTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCCTCTTTGAACTGTTaGAACGTGATGGTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LFHSKALILTTMQDRLPVASLNC*NVMVRA
Trigger: CGCCCGAACCATCACGTTTCAACAGTTCAAAGAGGC...TACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR TCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGGTCTTTGCCCTCCATaGGTCCATAAATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLGLCPP*VHKCSP
Trigger: TGGAGAACATTTATGGACTCATGGAGGGCAAAGACC...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGAQFLH*LFELLK
Trigger: TTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGC...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTGTGTGTGCAGATATGTaGGAGCCGGTTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAAVCADM*EPVGCG
Trigger: GCCACAGCCAACCGGCTCCCACATATCTGCACACAC...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTCTTAGAGTACCCGGATaGTGGTCTGACCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAALRVPG*WSDPSR
Trigger: CCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAG...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTGCCGGTGTACTTGCTaGTGTCTGTCAAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRCRCTC*CLSNGP
Trigger: TGGACCGTTTGACAGACACCAGCAAGTACACCGGCA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTCATTTCAGTGCCACTaGTTGATGATTCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWSFQCH*LMILQT
Trigger: CGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGA...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR GCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTCTTCTTATCGTAGGTaGCAGAACCCTTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLSSYRR*QNPCNH
Trigger: GTGGTTACAAGGGTTCTGGCACCTACGATAAGAAGA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTGTGCACCAGAACTCCTaGTCTTGGAATCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAAVHQNS*SWNPGS
Trigger: GCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCAC...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGAAGCTCCTCTCTACTTaGTCTTCTTATCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLKLLST*SSYRRC
Trigger: GCACCTACGATAAGAAGACCAAGTAGAGAGGAGCTT...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTCATCCACTCCACATCTaGTTCATCTCTTTACTCCAA +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGHPLHI*FISLLQ
Trigger: TTGGAGTAAAGAGATGAACCAGATGTGGAGTGGATG...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR TCA 90 bp CCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCGGTCTTTGCCCTCCATaGGTCCATAAATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLFHSKALILTTMQDRLGLCPP*VHKCSP
Trigger: TGGAGAACATTTATGGACTCATGGAGGGCAAAGACC...GAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGAGATATATTTGAGTTaGGTCTTACTGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGEIYLS*VLLELE
Trigger: CTCCAACTCCAGTAAGACTCAACTCAAATATATCTC...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR GCA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTCATTTCAGTGCCACTaGTTGATGATTCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLSFQCH*LMILQT
Trigger: CGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGTTGTTCATTTCAGTaGCACTGCTTGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: SWSVCAVQARREHPLHIWCCSFQ*HCLMIL
Trigger: GAGAATCATCAAGCAGTGGCACTGAAATGAACAACA...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR GCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTGTCAAACGGTCCACTaGACCCACTGTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRCQTVH*THCCCF
Trigger: AAAGCAACAACAGTGGGTGCAGTGGACCGTTTGACA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTTCTTCTTATCGTAGGTaGCAGAACCCTTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPSSYRR*QNPCNH
Trigger: GTGGTTACAAGGGTTCTGGCACCTACGATAAGAAGA...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp TGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGGAACCCACCCTCCTGTaGTGCCTCTTCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CTHRCLLFSKLPGVKHAGEPTLL*CLFSLS
Trigger: AGAGAGGGAGAAGAGGCAGCACAGGAGGGTGGGTTC...CCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp TCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGTGCAGTTTGTAAGCTaGAGAGGCAGGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: SKALILTTMQDRLPVAGIVQFVS*RGRIQF
Trigger: GAATTGAATCCTGCCTCTGCAGCTTACAAACTGCAC...AATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp GGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: GFNSWSVSLKSLDLNHHASASGG*VFALHE
Trigger: CTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCT...TGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp GAAGGTGGAGGGACAGGGAAGGATCTAATATGTGATATAGTCATAGTCCATCACCTGCTCTTGGAATCCTaGCAGCCTGCCTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EGGGTGKDLICDIVIVHHLLLES*QPASSG
Trigger: GCCAGATGAGGCAGGCTGCCAGGATTCCAAGAGCAG...GTGATGGACTATGACTATATCACATATTAGATCCTTCCCTGTCCCTCCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR CAA 72 bp CAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTaGATCTTAACCACCATGCAGGACCGCCTCCCCGTA +
Preference number: 4 (lower is better)
Translates to: QDSIPGLFHSKA*ILTTMQDRLPV
Trigger: TACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRAQFLH*LFELLK
Trigger: TTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGC...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CCA 90 bp TCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCCTTTGAAGCGCTTCTaGCCCAGTTCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SIPGLFHSKALILTTMQDPLKRF*PSSFTA
Trigger: GGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGG...GTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp TGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGCAGAACTCCTGCTCTTaGAATCCTGGCAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CTHRCLLFSKLPGVKHAGQNSCS*NPGSLP
Trigger: AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTG...CCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp TGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGGCCTCTTTGAACTGTTaGAACGTGATGGTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: CTHRCLLFSKLPGVKHAGASLNC*NVMVRA
Trigger: CGCCCGAACCATCACGTTTCAACAGTTCAAAGAGGC...CCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp TCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGAGATATATTTGAGTTaGGTCTTACTGGAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SKALILTTMQDRLPVAGIEIYLS*VLLELE
Trigger: CTCCAACTCCAGTAAGACTCAACTCAAATATATCTC...AATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR GCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTCATTTCAGTGCCACTaGTTGATGATTCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRSFQCH*LMILQT
Trigger: CGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp TCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTTGTTGTTCATTTCAGTaGCACTGCTTGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: SKALILTTMQDRLPVAGICCSFQ*HCLMIL
Trigger: GAGAATCATCAAGCAGTGGCACTGAAATGAACAACA...AATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR GCA 90 bp GCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGAGTTGGAGTGTGTGTaGTGTCCAGGCGAGACGAGA +
Preference number: 4 (lower is better)
Translates to: AGFNSWSVSLKSLDLNHHELECV*CPGETR
Trigger: TCTCGTCTCGCCTGGACAGCACACACACTCCAACTC...ATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR GCA 90 bp TTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTCACTTTCAGGTTTCTTaGATAGGTAACCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FHSKALILTTMQDRLPVAHFQVS*IGNQGN
Trigger: GTTTCCCTGGTTACCTATGCAAGAAACCTGAAAGTG...AGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555751.1
CDS-3UTR CCA 90 bp CTCACAGACAGAGATTTTGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCCTTTGAAGCGCTTCTaGCCCAGTTCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTDRDFGCCTHRCLLFSKPLKRF*PSSFTA
Trigger: GGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGG...CTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTCACAGACAGAGATTTTaGCTGCTGCACACACAGATG +
Preference number: 4 (lower is better)
Translates to: SLYTSRLICPSQTEILAAHRQRF*LLHTQM
Trigger: CATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTG...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTAACTTAGTTCTGGGCTaGGTGTTGAAAATAGACTCT +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPNLVLG*VLKIDS
Trigger: AGAGTCTATTTTCAACACCCAGCCCAGAACTAAGTT...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp GGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATAGGAGGAATGCTAACTaGTGGCTGGTAGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GCCTHRCLLFSKLPGVKHRRNAN*WLVGIR
Trigger: CCTTATGCCTACCAGCCATCAGTTAGCATTCCTCCT...ATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp GTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCTTGTATTTAAGTGTGTaGAGATATGTGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VYCFPSSLVLNMQGQGASLYLSV*RYVGAG
Trigger: ACCGGCTCCCACATATCTGCACACACTTAAATACAA...GCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTGTTGTTCATTTCAGTaGCACTGCTTGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRCCSFQ*HCLMIL
Trigger: GAGAATCATCAAGCAGTGGCACTGAAATGAACAACA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR GCA 90 bp CAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QWFRKQIDGVQFVSCRGRAQFLH*LFELLK
Trigger: TTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGC...CCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAACCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGAGAGATTTTGGCTGCTaGACACACAGATGTTTATTG +
Preference number: 4 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRRDFGC*THRCLL
Trigger: CAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCT...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGCTTCCATCCTGTTCTTaGAAGCAGCTGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CTHRCLLFSKLPGVKHAGLPSCS*KQLLRR
Trigger: CCTCCTCAACAGCTGCTTCCAAGAACAGGATGGAAG...CCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GCTTTTTCTTCAGTGCACCAGAACTCCTGCTCTTGGAATCCTGGCAGCCTGCCTTTTTACCTCCACATCTaGTTCATCTCTTTACTCCAA +
Preference number: 4 (lower is better)
Translates to: AFSSVHQNSCSWNPGSLPFYLHI*FISLLQ
Trigger: TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAA...AGGCAGGCTGCCAGGATTCCAAGAGCAGGAGTTCTGGTGCACTGAAGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GAGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCTTCCATCCTGTTCTTaGAAGCAGAGTAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EAGFNSWSVSLKSLDLNHLPSCS*KQSSAS
Trigger: ACTGGCGCTACTCTGCTTCCAAGAACAGGATGGAAG...GTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555751.1
CDS-3UTR TCA 90 bp GAAGGTGGAGGGACAGGGAAGGATCTAATATGTGATATAGTCATAGTCCATCACGGTCTTTGCCCTCCATaGGTCCATAAATGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGGGTGKDLICDIVIVHHGLCPP*VHKCSP
Trigger: TGGAGAACATTTATGGACTCATGGAGGGCAAAGACC...GTGATGGACTATGACTATATCACATATTAGATCCTTCCCTGTCCCTCCACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp GGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATTGTCAAACGGTCCACTaGACCCACTGTTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GCCTHRCLLFSKLPGVKHCQTVH*THCCCF
Trigger: AAAGCAACAACAGTGGGTGCAGTGGACCGTTTGACA...ATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GAAGGTGGAGGGACAGGGAAGGATCTAATATGTGATATAGTCATAGTCCATCACGTGGGGGTGGAGAGGTaGATATCAGTAATGTGTGAA +
Preference number: 4 (lower is better)
Translates to: EGGGTGKDLICDIVIVHHVGVER*ISVMCE
Trigger: TTCACACATTACTGATATCCACCTCTCCACCCCCAC...GTGATGGACTATGACTATATCACATATTAGATCCTTCCCTGTCCCTCCACCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGAGTCTTACTGGAGTTaGAGTGTGTGTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DSIPGLFHSKALILTTMQESYWS*SVCAVQ
Trigger: CTGGACAGCACACACACTCCAACTCCAGTAAGACTC...CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495665.2
3UTR CAA 72 bp GACAGAGATTTTGGCTGCTGCACACACAGATGTTTATaGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGG +
Preference number: 4 (lower is better)
Translates to: DRDFGCCTHRCL*FSKLPGVKHAG
Trigger: CCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp CTCACAGACAGAGATTTTGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCATCACGTGAGGAATTaGTACACCCTTTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LTDRDFGCCTHRCLLFSKHHVRN*YTLLRG
Trigger: ACCCCTCAAAAGGGTGTAGCAATTCCTCACGTGATG...CTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp CAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATATCTGCCTCTGATGCCATaGTCAGCTAGAGGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: QVVDTFTSTSGSSLYSKYLPLMP*SARGRG
Trigger: TCCCCGACCTCTAGCTGACCATGGCATCAGAGGCAG...ATATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
3UTR CAA 72 bp ACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTaGGCTGCTGCACACACAGATGTTTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TSRLICPSQTEI*AAAHTDVYCFP
Trigger: TGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATAGGGTGCCGGTGTACTTaGTGGTGTCTGTCAAACGGT +
Preference number: 4 (lower is better)
Translates to: TSSRYFYLHIWFISLLQIGCRCT*WCLSNG
Trigger: ACCGTTTGACAGACACCAGCAAGTACACCGGCACCC...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp GAAGGTGGAGGGACAGGGAAGGATCTAATATGTGATATAGTCATAGTCCATCACGACAGAGATTTTGGCTaGTGCACACACAGATGTTTA +
Preference number: 4 (lower is better)
Translates to: EGGGTGKDLICDIVIVHHDRDFG*CTHRCL
Trigger: TAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTC...GTGATGGACTATGACTATATCACATATTAGATCCTTCCCTGTCCCTCCACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR GCA 90 bp GCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGTGCAGTTTGTAAGCTaGAGAGGCAGGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: AGFNSWSVSLKSLDLNHHVQFVS*RGRIQF
Trigger: GAATTGAATCCTGCCTCTGCAGCTTACAAACTGCAC...ATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp AACACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAATGCCGGTGTACTTGCTaGTGTCTGTCAAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTSSRYFYLHIWFISLLQCRCTC*CLSNGP
Trigger: TGGACCGTTTGACAGACACCAGCAAGTACACCGGCA...TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp TGGTTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGATTGCAGGATTCAATTCCTaGTCTGTTTCACTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: WFRKQIDGVQFVSCRGRIAGFNS*SVSLKS
Trigger: GCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC...AATCCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp GAGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACGCAGGATTCAATTCCTaGTCTGTTTCACTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: EAGFNSWSVSLKSLDLNHAGFNS*SVSLKS
Trigger: GCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGC...GTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR TCA 90 bp AACACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAACTGTCTTGCCATCCATaGTGCCACAGTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: NTSSRYFYLHIWFISLLQLSCHP*CHSLCT
Trigger: TGTGCAAAGACTGTGGCATCATGGATGGCAAGACAG...TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp CAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATATATCTGGCCATCTTCCTaGGCTACCCTTAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVVDTFTSTSGSSLYSKYIWPSS*ATLSSQ
Trigger: CTGACTGCTAAGGGTAGCTCAGGAAGATGGCCAGAT...ATATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp AGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATCCTCATGAACAGATaGAACAAGGAAGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQDSIPGLFHSKALILTTILMNR*NKEAFS
Trigger: ACTGAAAGCTTCCTTGTTTCATCTGTTCATGAGGAT...GGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATACTCTTCTGTCCCATGTaGCCCATGATGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSSRYFYLHIWFISLLQILFCPM*PMMEVM
Trigger: CATCACCTCCATCATGGGGCACATGGGACAGAAGAG...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR TCA 90 bp GATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGATCCTCATGAACAGATaGAACAAGGAAGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DSIPGLFHSKALILTTMQILMNR*NKEAFS
Trigger: ACTGAAAGCTTCCTTGTTTCATCTGTTCATGAGGAT...CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp GGTCTAAAAACTCTTGATATACATCTTAATGGATCCTCATACTGCCGTGAGGTAGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GLKTLDIHLNGSSYCREVAQFLH*LFELLK
Trigger: TTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGC...TACCTCACGGCAGTATGAGGATCCATTAAGATGTATATCAAGAGTTTTTAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CCA 90 bp GAGGCAGGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCAAGGAAGCTTTCAGTaGTTTCGTAAACAGATAGAT +
Preference number: 4 (lower is better)
Translates to: EAGFNSWSVSLKSLDLNHQGSFQ*FRKQID
Trigger: ATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTG...GTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCCTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp AACACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: NTSSRYFYLHIWFISLLQAQFLH*LFELLK
Trigger: TTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGC...TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp GGATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCACAAGGAAGCTTTCAGTaGTTTCGTAAACAGATAGAT +
Preference number: 4 (lower is better)
Translates to: GFNSWSVSLKSLDLNHHAQGSFQ*FRKQID
Trigger: ATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTG...TGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR GCA 90 bp GGTCTAAAAACTCTTGATATACATCTTAATGGATCCTCATACTGCCGTGAGGTACACTTTCAGGTTTCTTaGATAGGTAACCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLKTLDIHLNGSSYCREVHFQVS*IGNQGK
Trigger: TTTTCCCTGGTTACCTATGCAAGAAACCTGAAAGTG...TACCTCACGGCAGTATGAGGATCCATTAAGATGTATATCAAGAGTTTTTAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR GCA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATATGTTGTTCATTTCAGTaGCACTGCTTGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: TSSRYFYLHIWFISLLQICCSFQ*HCLMIL
Trigger: GAGAATCATCAAGCAGTGGCACTGAAATGAACAACA...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CCA 90 bp CAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATATCCCTTACCCCAGCTCTaGAACAAATTTGTAATAGAA +
Preference number: 4 (lower is better)
Translates to: QVVDTFTSTSGSSLYSKYPLPQL*NKFVIE
Trigger: TTCTATTACAAATTTGTTCCAGAGCTGGGGTAAGGG...ATATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS GCA 90 bp CTTGTGGGTGCCGGTGTACTTGCTGGTGTCTGTCAAACGGTCCACTaGACCCACTGTTGTTGCTTTAGTAGCGCCAGTGGTGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LVGAGVLAGVCQTVH*THCCCFSSASGGWV
Trigger: GACCCAGCCACCACTGGCGCTACTAAAGCAACAACAGTGGGTGCAGTGGACCGTTTGACAGACACCAGCAAGTACACCGGCACCCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321760.11
ENST00000530140.6
ENST00000534434.2
CDS-3UTR CAA 90 bp AGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTATGGTTCGGGCGTTCTaGGCCTTGACTTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SVCAVQARREHPHVPGTGMVRAF*ALTLLN
Trigger: GTTCAGCAAAGTCAAGGCCAAGAACGCCCGAACCAT...ACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTGTGGAGGTGACTGTCTaGCCATCCATGATGCCACAG +
Preference number: 5 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGVEVTV*PSMMPQ
Trigger: CTGTGGCATCATGGATGGCAAGACAGTCACCTCCAC...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp AGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTTTCTTGGCCTTGACTTaGCTGAACACGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: SVCAVQARREHPHVPGTGFLALT*LNTMST
Trigger: CGTGGACATCGTGTTCAGCAAAGTCAAGGCCAAGAA...ACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGCGGGCGTTCTTGGCCTaGACTTTGCTGAACACGATG +
Preference number: 5 (lower is better)
Translates to: SWSVCAVQARREHPLHIWRAFLA*TLLNTM
Trigger: CATCGTGTTCAGCAAAGTCAAGGCCAAGAACGCCCG...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTGGGTGCCGGTGTACTaGCTGGTGTCTGTCAAACGG +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLWVPVY*LVSVKR
Trigger: CCGTTTGACAGACACCAGCAAGTACACCGGCACCCA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS TCA 90 bp AGGGAGGACTCCACATCAGCACTTCCTTCTCTCCTCCGCGCAGCCTaGACTGATGCCCTTGTAGCCTATATTGATTCCGGCTCGAGCCTA +
Preference number: 5 (lower is better)
Translates to: REDSTSALPSLLRAA*TDALVAYIDSGSSL
Trigger: TAGGCTCGAGCCGGAATCAATATAGGCTACAAGGGCATCAGTTCAGGCTGCGCGGAGGAGAGAAGGAAGTGCTGATGTGGAGTCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533755.5
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGGTGGAGGTGACTGTCTaGCCATCCATGATGCCACAG +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLVEVTV*PSMMPQ
Trigger: CTGTGGCATCATGGATGGCAAGACAGTCACCTCCAC...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGCGGGCGTTCTTGGCCTaGACTTTGCTGAACACGATG +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLRAFLA*TLLNTM
Trigger: CATCGTGTTCAGCAAAGTCAAGGCCAAGAACGCCCG...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGATGGTTCGGGCGTTCTaGGCCTTGACTTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SWSVCAVQARREHPLHIWMVRAF*ALTLLN
Trigger: GTTCAGCAAAGTCAAGGCCAAGAACGCCCGAACCAT...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp CTTGATCTTAACCACCATGCAGGACCGCCTCCCCGTAGCTGGGATTGGGGAGGTTGCCTCTTTGAACTGTaGAAACGTGATGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: LDLNHHAGPPPRSWDWGGCLFEL*KRDGSG
Trigger: GCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCA...ACCTCCCCAATCCCAGCTACGGGGAGGCGGTCCTGCATGGTGGTTAAGATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS TCA 90 bp GGTAGACTGGAACAATGGGGATTTAGGGAAGTAGGGTCAAGGGGATaGAGGCTGTCACTCACAGTAGCGCCAGTGGTGGCTGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GRLEQWGFREVGSRG*RLSLTVAPVVAGSL
Trigger: CAAAGACCCAGCCACCACTGGCGCTACTGTGAGTGACAGCCTTCATCCCCTTGACCCTACTTCCCTAAATCCCCATTGTTCCAGTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460647.6
CDS CCA 90 bp GTCAAGGGGATGAAGGCTGTCACTCACAGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAGTCCATAAATGTTCTCCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: VKGMKAVTHSSASGG*VFALHESINVLQDF
Trigger: GAAGTCCTGGAGAACATTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTGTGAGTGACAGCCTTCATCCCCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460647.6
CDS-3UTR CAA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTTCTTGGCCTTGACTTaGCTGAACACGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: SWSVCAVQARREHPLHIWFLALT*LNTMST
Trigger: CGTGGACATCGTGTTCAGCAAAGTCAAGGCCAAGAA...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGATGGTTCGGGCGTTCTaGGCCTTGACTTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLMVRAF*ALTLLN
Trigger: GTTCAGCAAAGTCAAGGCCAAGAACGCCCGAACCAT...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp GTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTTGCCTCTTTGAACTGTaGAAACGTGATGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: VGVCVLSRRDESIHSTSGCLFEL*KRDGSG
Trigger: GCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCA...ACCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGTTTCAGTGCCACTGCTaGATGATTCTCCAAACGCAG +
Preference number: 5 (lower is better)
Translates to: SWSVCAVQARREHPLHIWFQCHC*MILQTQ
Trigger: CTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAA...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTTCTTGGCCTTGACTTaGCTGAACACGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLFLALT*LNTMST
Trigger: CGTGGACATCGTGTTCAGCAAAGTCAAGGCCAAGAA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTGCCTCTTTGAACTGTaGAAACGTGATGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLCLFEL*KRDGSG
Trigger: GCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTCATCAAAGCGCTCCTaGTGGGTGCCGGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRSSKRS*WVPVYL
Trigger: CAAGTACACCGGCACCCACAAGGAGCGCTTTGATGA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS GCA 90 bp ATCTGGACTCTTCCCTTTGAAGCGCTTCTGGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAACGTGATGGTTCGGGCGTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: IWTLPFEALLAQFLH*LFELLKRDGSGVLG
Trigger: GCCAAGAACGCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000529496.1
ENST00000530140.6
ENST00000534434.2
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGTTTCAGTGCCACTGCTaGATGATTCTCCAAACGCAG +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLFQCHC*MILQTQ
Trigger: CTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAA...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp AGTTGGAGTGTGTGTGCTGTCCAGGCGAGACGAGAGCATCCACTCCACATCTGGCAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SWSVCAVQARREHPLHIWQSLHS*EKFLLF
Trigger: GAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTG...CCAGATGTGGAGTGGATGCTCTCGTCTCGCCTGGACAGCACACACACTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481535.5
CDS-3UTR CAA 90 bp GCCTCTTCTCCCTCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGGTTCTGGGCTGGGTGTaGAAAATAGACTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: ASSPSLYTSRLICPSQTEVLGWV*KIDSPL
Trigger: AAGGGGAGAGTCTATTTTCAACACCCAGCCCAGAAC...CTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGAGGGAGAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS CCA 90 bp GTCTTTGCCCTCCATGAGTCCATAAATGTTCTCCAGGACTTCATCTaGACTCTTCCCTTTGAAGCGCTTCTGGCCCAGTTCCTTCACTGC +
Preference number: 5 (lower is better)
Translates to: VFALHESINVLQDFI*TLPFEALLAQFLHC
Trigger: GCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAGATGAAGTCCTGGAGAACATTTATGGACTCATGGAGGGCAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000529496.1
ENST00000530140.6
ENST00000534434.2
ENST00000555751.1
CDS-3UTR CAA 90 bp TGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGCTGCAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: CFPSSLVLNMQGQGASRLQSLHS*EKFLLF
Trigger: GAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTG...CAGCCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp CAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGGTGGAGGTGACTGTCTaGCCATCCATGATGCCACAG +
Preference number: 5 (lower is better)
Translates to: QWFRKQIDGVQFVSCRGRVEVTV*PSMMPQ
Trigger: CTGTGGCATCATGGATGGCAAGACAGTCACCTCCAC...CCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp TCTCTCTACACTAGTAGGCTCATCTGTCCCTCACAGACAGAGATTTTGGCTGCTCGGGCGTTCTTGGCCTaGACTTTGCTGAACACGATG +
Preference number: 5 (lower is better)
Translates to: SLYTSRLICPSQTEILAARAFLA*TLLNTM
Trigger: CATCGTGTTCAGCAAAGTCAAGGCCAAGAACGCCCG...AGCAGCCAAAATCTCTGTCTGTGAGGGACAGATGAGCCTACTAGTGTAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp TGCTGTCCAGGCGAGACGAGAGCATCCACATGTGCCGGGCACTGGTCTAAAAACTTTCACTCAAAAGCCTaGATCTTAACCACCATGCAG +
Preference number: 5 (lower is better)
Translates to: CCPGETRASTCAGHWSKNFHSKA*ILTTMQ
Trigger: CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAA...GTTTTTAGACCAGTGCCCGGCACATGTGGATGCTCTCGTCTCGCCTGGACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTTTCAGTGCCACTGCTaGATGATTCTCCAAACGCAG +
Preference number: 5 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRFQCHC*MILQTQ
Trigger: CTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp GACAGAGATTTTGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTTGGGTGCCGGTGTACTaGCTGGTGTCTGTCAAACGG +
Preference number: 5 (lower is better)
Translates to: DRDFGCCTHRCLLFSKLPWVPVY*LVSVKR
Trigger: CCGTTTGACAGACACCAGCAAGTACACCGGCACCCA...AGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTCACAGACAGAGATTTaGGCTGCTGCACACACAGAT +
Preference number: 5 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRSQTEI*AAAHTD
Trigger: ATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS GCA 90 bp CAGGCTGAGATGAAGCTCCTCTCTACTTGGTCTTCTTATCGTAGGTaGCAGAACCCTTGTAACCACTCACATAGCCTGTGTTGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: QAEMKLLSTWSSYRR*QNPCNHSHSLCCQS
Trigger: TGACTGACAACACAGGCTATGTGAGTGGTTACAAGGGTTCTGGCACCTACGATAAGAAGACCAAGTAGAGAGGAGCTTCATCTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321760.11
ENST00000530140.6
ENST00000534434.2
CDS CCA 90 bp TCCTCTCTTTCCCCTACCTCTTTTATGTACCTTAGAGTACCCGGATaGTGGTCTGACCCTTCCCGGCCTTTGTATTTAAGTGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SSLSPTSFMYLRVPG*WSDPSRPLYLSVCR
Trigger: TCTGCACACACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGGTAGGGGAAAGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525425.2
CDS GCA 90 bp GGCCCTGGTCAGTTAGACAGAAATCCAGAAACTTTGGAGCATGAATaGATTACCTTCCAAGGTCCAACTCTTGCCTCACTCAGATTTGGC +
Preference number: 5 (lower is better)
Translates to: GPGQLDRNPETLEHE*ITFQGPTLASLRFG
Trigger: GCCAAATCTGAGTGAGGCAAGAGTTGGACCTTGGAAGGTAATGCATTCATGCTCCAAAGTTTCTGGATTTCTGTCTAACTGACCAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529496.1
ENST00000534434.2
CDS-3UTR CAA 90 bp TATTGTTTTCCAAGCTCCCTGGTGTTAAACATGCAGGGTCAGGGGGCTAGCAGGTTGGAGAAGTTCTTGTaGTTCATTTCAGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: YCFPSSLVLNMQGQGASRLEKFL*FISVPL
Trigger: CAGTGGCACTGAAATGAACAACAAGAACTTCTCCAA...CCTGCTAGCCCCCTGACCCTGCATGTTTAACACCAGGGAGCTTGGAAAACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321760.11
ENST00000530140.6
CDS-3UTR CAA 90 bp CAGATGAAACAAGGAAGCTTTCAGTGGTTTCGTAAACAGATAGATGGTGTGCAGCGGGCGTTCTTGGCCTaGACTTTGCTGAACACGATG +
Preference number: 5 (lower is better)
Translates to: QMKQGSFQWFRKQIDGVQRAFLA*TLLNTM
Trigger: CATCGTGTTCAGCAAAGTCAAGGCCAAGAACGCCCG...CTGCACACCATCTATCTGTTTACGAAACCACTGAAAGCTTCCTTGTTTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp GACAGAGATTTTGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTCCATCACGTGAGGAATaGCTACACCCTTTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: DRDFGCCTHRCLLFSKLPPSREE*LHPFEG
Trigger: CCCCTCAAAAGGGTGTAGCAATTCCTCACGTGATGG...AGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS CCA 90 bp TCTCTTTCCCCTACCTCTTTTATGTACCTTAGAGTACCCGGATGGTaGTCTGACCCTTCCCGGCCTTTGTATTTAAGTGTGTGCAGATAT +
Preference number: 5 (lower is better)
Translates to: SLSPTSFMYLRVPGW*SDPSRPLYLSVCRY
Trigger: ATATCTGCACACACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGGTAGGGGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525425.2
CDS-3UTR CAA 90 bp CAGTGGTTTCGTAAACAGATAGATGGTGTGCAGTTTGTAAGCTGCAGAGGCAGGCAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: QWFRKQIDGVQFVSCRGRQSLHS*EKFLLF
Trigger: GAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTG...CCTGCCTCTGCAGCTTACAAACTGCACACCATCTATCTGTTTACGAAACCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp GGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGCTCCCTGGTGTTAAACATTCTTCCATCCTGTTCTaGGAAGCAGCTGTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GCCTHRCLLFSKLPGVKHSSILF*EAAVEE
Trigger: CTCCTCAACAGCTGCTTCCAAGAACAGGATGGAAGA...ATGTTTAACACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS TCA 90 bp TCTTGGCCCTGGTCAGTTAGACAGAAATCCAGAAACTTTGGAGCATaGATGCATTACCTTCCAAGGTCCAACTCTTGCCTCACTCAGATT +
Preference number: 5 (lower is better)
Translates to: SWPWSVRQKSRNFGA*MHYLPRSNSCLTQI
Trigger: AATCTGAGTGAGGCAAGAGTTGGACCTTGGAAGGTAATGCATTCATGCTCCAAAGTTTCTGGATTTCTGTCTAACTGACCAGGGCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529496.1
ENST00000534434.2
CDS-3UTR CAA 90 bp TCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGGACTTTCAGTGCCACTGCTaGATGATTCTCCAAACGCAG +
Preference number: 5 (lower is better)
Translates to: SIPGLFHSKALILTTMQDFQCHC*MILQTQ
Trigger: CTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAA...GTCCTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495665.2
CDS-3UTR CAA 90 bp CTCACAGACAGAGATTTTGGCTGCTGCACACACAGATGTTTATTGTTTTCCAAGTTCTTGGCCTTGACTTaGCTGAACACGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: LTDRDFGCCTHRCLLFSKFLALT*LNTMST
Trigger: CGTGGACATCGTGTTCAGCAAAGTCAAGGCCAAGAA...CTTGGAAAACAATAAACATCTGTGTGTGCAGCAGCCAAAATCTCTGTCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp GAAGGTGGAGGGACAGGGAAGGATCTAATATGTGATATAGTCATAGTCCATCACCAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: EGGGTGKDLICDIVIVHHQSLHS*EKFLLF
Trigger: GAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTG...GTGATGGACTATGACTATATCACATATTAGATCCTTCCCTGTCCCTCCACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATAGTGGAGGTGACTGTCTaGCCATCCATGATGCCACAG +
Preference number: 5 (lower is better)
Translates to: TSSRYFYLHIWFISLLQIVEVTV*PSMMPQ
Trigger: CTGTGGCATCATGGATGGCAAGACAGTCACCTCCAC...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp AACACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATGGTTCGGGCGTTCTaGGCCTTGACTTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: NTSSRYFYLHIWFISLLQMVRAF*ALTLLN
Trigger: GTTCAGCAAAGTCAAGGCCAAGAACGCCCGAACCAT...TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATATCATCAAAGCGCTCCTaGTGGGTGCCGGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TSSRYFYLHIWFISLLQISSKRS*WVPVYL
Trigger: CAAGTACACCGGCACCCACAAGGAGCGCTTTGATGA...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp AACACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAATGCCTCTTTGAACTGTaGAAACGTGATGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: NTSSRYFYLHIWFISLLQCLFEL*KRDGSG
Trigger: GCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCA...TTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS-3UTR CAA 90 bp GATTCAATTCCTGGTCTGTTTCACTCAAAAGCCTTGATCTTAACCACCATGCAGTTTCACTCAAAAGCCTaGATCTTAACCACCATGCAG +
Preference number: 5 (lower is better)
Translates to: DSIPGLFHSKALILTTMQFHSKA*ILTTMQ
Trigger: CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAA...CTGCATGGTGGTTAAGATCAAGGCTTTTGAGTGAAACAGACCAGGAATTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495665.2
ENST00000555751.1
CDS-3UTR CAA 90 bp ACAAGTAGTAGATACTTTTACCTCCACATCTGGTTCATCTCTTTACTCCAAATAACACACAGATGTTTATaGTTTTCCAAGCTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TSSRYFYLHIWFISLLQITHRCL*FSKLPG
Trigger: ACCAGGGAGCTTGGAAAACAATAAACATCTGTGTGT...TATTTGGAGTAAAGAGATGAACCAGATGTGGAGGTAAAAGTATCTACTACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321760.11
CDS CAA 90 bp CTTAGGGGTAGACAGACACTGGGGAGGGTTAGTGACCCGAGGAGGTaGATGACCCTGGGAGTCTGGGTCTTGGCTGAGGCTTTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: LRGRQTLGRVSDPRR*MTLGVWVLAEAFRP
Trigger: GGGACGGAAAGCCTCAGCCAAGACCCAGACTCCCAGGGTCATCAACCTCCTCGGGTCACTAACCCTCCCCAGTGTCTGTCTACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533755.5
CDS CAA 72 bp AGACAGACACTGGGGAGGGTTAGTGACCCGAGGAGGTaGATGACCCTGGGAGTCTGGGTCTTGGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: RQTLGRVSDPRR*MTLGVWVLAEA
Trigger: AGCCTCAGCCAAGACCCAGACTCCCAGGGTCATCAACCTCCTCGGGTCACTAACCCTCCCCAGTGTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533755.5
CDS CAA 90 bp GTCTCGAAGACAAAGGATAGCACAGCGCCAGGTACCCTGTGGTGCTaGGTAGGCCCACTGCAAATGTTCCACCACGTGAACCCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: VSKTKDSTAPGTLWC*VGPLQMFHHVNPSV
Trigger: CACGGAAGGGTTCACGTGGTGGAACATTTGCAGTGGGCCTACCAAGCACCACAGGGTACCTGGCGCTGTGCTATCCTTTGTCTTCGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525425.2
ENST00000529496.1
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS GCA 72 bp GCCGGTGTACTTGCTGGTGTCTGTCAAACGGTCCACTaGACCCACTGTTGTTGCTTTAGTAGCGCCAGTGGT +
Preference number: 6 (lower is better)
Translates to: AGVLAGVCQTVH*THCCCFSSASG
Trigger: ACCACTGGCGCTACTAAAGCAACAACAGTGGGTGCAGTGGACCGTTTGACAGACACCAGCAAGTACACCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321760.11
ENST00000530140.6
ENST00000534434.2
CDS CCA 72 bp GCGAGACGAGAGCATCCAAGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAGTCCATAAATGTTCTC +
Preference number: 6 (lower is better)
Translates to: ARREHPSSASGG*VFALHESINVL
Trigger: GAGAACATTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTTGGATGCTCTCGTCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472458.5
ENST00000529496.1
CDS CAA 72 bp ACAAAGGATAGCACAGCGCCAGGTACCCTGTGGTGCTaGGTAGGCCCACTGCAAATGTTCCACCACGTGAAC +
Preference number: 6 (lower is better)
Translates to: TKDSTAPGTLWC*VGPLQMFHHVN
Trigger: GTTCACGTGGTGGAACATTTGCAGTGGGCCTACCAAGCACCACAGGGTACCTGGCGCTGTGCTATCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525425.2
ENST00000529496.1
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS TCA 72 bp GAACAATGGGGATTTAGGGAAGTAGGGTCAAGGGGATaGAGGCTGTCACTCACAGTAGCGCCAGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: EQWGFREVGSRG*RLSLTVAPVVA
Trigger: AGCCACCACTGGCGCTACTGTGAGTGACAGCCTTCATCCCCTTGACCCTACTTCCCTAAATCCCCATTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460647.6
CDS GCA 72 bp CTTCCCTTTGAAGCGCTTCTGGCCCAGTTCCTTCACTaGCTCTTTGAACTGTTGAAACGTGATGGTTCGGGC +
Preference number: 6 (lower is better)
Translates to: LPFEALLAQFLH*LFELLKRDGSG
Trigger: GCCCGAACCATCACGTTTCAACAGTTCAAAGAGGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000529496.1
ENST00000530140.6
ENST00000534434.2
CDS CCA 72 bp ATGAAGGCTGTCACTCACAGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAGTCCATAAATGTTCTC +
Preference number: 6 (lower is better)
Translates to: MKAVTHSSASGG*VFALHESINVL
Trigger: GAGAACATTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTGTGAGTGACAGCCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460647.6
CDS CCA 72 bp TCCTGTTCTTGGAAGCAGAGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAGTCCATAAATGTTCTC +
Preference number: 6 (lower is better)
Translates to: SCSWKQSSASGG*VFALHESINVL
Trigger: GAGAACATTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTCTGCTTCCAAGAACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481535.5
ENST00000555751.1
CDS CAA 72 bp AAAGTCTGTTTCGGCCCTGTCTCTACAGTCACACAGTaGGCAGGGTTAGGGAGGGTAGACTGGAACAATGGG +
Preference number: 6 (lower is better)
Translates to: KVCFGPVSTVTQ*AGLGRVDWNNG
Trigger: CCCATTGTTCCAGTCTACCCTCCCTAACCCTGCCAACTGTGTGACTGTAGAGACAGGGCCGAAACAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460647.6
CDS CCA 72 bp ACCCACTGTTGTTGCTTTAGTAGCGCCAGTGGTGGCTaGGTCTTTGCCCTCCATGAGTCCATAAATGTTCTC +
Preference number: 6 (lower is better)
Translates to: THCCCFSSASGG*VFALHESINVL
Trigger: GAGAACATTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTAAAGCAACAACAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321760.11
ENST00000530140.6
ENST00000534434.2
CDS CAA 90 bp ACGTCCGTGGAGGTGACTGTCTTGCCATCCATGATGCCACAGTCTTaGCACAGCTTGGAGAAGTTCTTGTTGTTCATTTCAGTGCCACTG +
Preference number: 6 (lower is better)
Translates to: TSVEVTVLPSMMPQS*HSLEKFLLFISVPL
Trigger: CAGTGGCACTGAAATGAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTGTGGCATCATGGATGGCAAGACAGTCACCTCCACGGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS CAA 90 bp TCGGGCGTTCTTGGCCCTGGTCAGTTAGACAGAAATCCAGAAACTTaGGAGCATGAATGCATTACCTTCCAAGGTCCAACTCTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: SGVLGPGQLDRNPET*EHECITFQGPTLAS
Trigger: TGAGGCAAGAGTTGGACCTTGGAAGGTAATGCATTCATGCTCCAAAGTTTCTGGATTTCTGTCTAACTGACCAGGGCCAAGAACGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529496.1
ENST00000534434.2
CDS CCA 72 bp CCTACCTCTTTTATGTACCTTAGAGTACCCGGATGGTaGTCTGACCCTTCCCGGCCTTTGTATTTAAGTGTG +
Preference number: 6 (lower is better)
Translates to: PTSFMYLRVPGW*SDPSRPLYLSV
Trigger: CACACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525425.2
CDS CCA 72 bp TCCCCTACCTCTTTTATGTACCTTAGAGTACCCGGATaGTGGTCTGACCCTTCCCGGCCTTTGTATTTAAGT +
Preference number: 6 (lower is better)
Translates to: SPTSFMYLRVPG*WSDPSRPLYLS
Trigger: ACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGGTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525425.2
CDS CCA 72 bp GAGGACTCTTTTATGTACCTTAGAGTACCCGGATGGTaGTCTGACCCTTCCCGGCCTTTGTATTTAAGTGTG +
Preference number: 6 (lower is better)
Translates to: EDSFMYLRVPGW*SDPSRPLYLSV
Trigger: CACACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532060.1
CDS CCA 72 bp AGGGAGGACTCTTTTATGTACCTTAGAGTACCCGGATaGTGGTCTGACCCTTCCCGGCCTTTGTATTTAAGT +
Preference number: 6 (lower is better)
Translates to: REDSFMYLRVPG*WSDPSRPLYLS
Trigger: ACTTAAATACAAAGGCCGGGAAGGGTCAGACCACCATCCGGGTACTCTAAGGTACATAAAAGAGTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532060.1
CDS CAA 90 bp GAGGTGACTGTCTTGCCATCCATGATGCCACAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTCATTTCAGTGCCACTGCTTGATGAT +
Preference number: 6 (lower is better)
Translates to: EVTVLPSMMPQSLHS*EKFLLFISVPLLDD
Trigger: ATCATCAAGCAGTGGCACTGAAATGAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTGTGGCATCATGGATGGCAAGACAGTCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS GCA 72 bp ATGAAGCTCCTCTCTACTTGGTCTTCTTATCGTAGGTaGCAGAACCCTTGTAACCACTCACATAGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: MKLLSTWSSYRR*QNPCNHSHSLC
Trigger: ACACAGGCTATGTGAGTGGTTACAAGGGTTCTGGCACCTACGATAAGAAGACCAAGTAGAGAGGAGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321760.11
ENST00000530140.6
ENST00000534434.2
CDS CAA 72 bp GTCTTGCCATCCATGATGCCACAGTCTTTGCACAGCTaGGAGAAGTTCTTGTTGTTCATTTCAGTGCCACTG +
Preference number: 6 (lower is better)
Translates to: VLPSMMPQSLHS*EKFLLFISVPL
Trigger: CAGTGGCACTGAAATGAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTGTGGCATCATGGATGGCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS CAA 90 bp TACCTTCCAAGGTCCAACTCTTGCCTCACTCAGATTTGGCCTCTTTaGTCCTATCAATCAGTGAGTGTCTCGAAGACAAAGGATAGCACA +
Preference number: 6 (lower is better)
Translates to: YLPRSNSCLTQIWPL*SYQSVSVSKTKDST
Trigger: TGTGCTATCCTTTGTCTTCGAGACACTCACTGATTGATAGGACAAAAGAGGCCAAATCTGAGTGAGGCAAGAGTTGGACCTTGGAAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529496.1
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS GCA 72 bp GCTTGGAGAAGTTCTTGTTGTTCATTTCAGTGCCACTaGTTGATGATTCTCCAAACGCAGCAAACCGATGGA +
Preference number: 6 (lower is better)
Translates to: AWRSSCCSFQCH*LMILQTQQTDG
Trigger: TCCATCGGTTTGCTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGAACAACAAGAACTTCTCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS CAA 72 bp GAGGTGACTGTCTTGCCATCCATGATGCCACAGTCTTaGCACAGCTTGGAGAAGTTCTTGTTGTTCATTTCA +
Preference number: 6 (lower is better)
Translates to: EVTVLPSMMPQS*HSLEKFLLFIS
Trigger: TGAAATGAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTGTGGCATCATGGATGGCAAGACAGTCACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000495665.2
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS TCA 72 bp TGGTCAGTTAGACAGAAATCCAGAAACTTTGGAGCATaGATGCATTACCTTCCAAGGTCCAACTCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: WSVRQKSRNFGA*MHYLPRSNSCL
Trigger: GAGGCAAGAGTTGGACCTTGGAAGGTAATGCATTCATGCTCCAAAGTTTCTGGATTTCTGTCTAACTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529496.1
ENST00000534434.2
CDS CAA 72 bp TGGAGAAGTTCTTGTTGTTCATTTCAGTGCCACTGCTaGATGATTCTCCAAACGCAGCAAACCGATGGAATG +
Preference number: 6 (lower is better)
Translates to: WRSSCCSFQCHC*MILQTQQTDGM
Trigger: CATTCCATCGGTTTGCTGCGTTTGGAGAATCATCAAGCAGTGGCACTGAAATGAACAACAAGAACTTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321760.11
ENST00000460647.6
ENST00000472458.5
ENST00000481535.5
ENST00000525425.2
ENST00000529496.1
ENST00000530140.6
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2
CDS CAA 90 bp ATGAATGCATTACCTTCCAAGGTCCAACTCTTGCCTCACTCAGATTaGGCCTCTTTTGTCCTATCAATCAGTGAGTGTCTCGAAGACAAA +
Preference number: 6 (lower is better)
Translates to: MNALPSKVQLLPHSD*ASFVLSISECLEDK
Trigger: TTTGTCTTCGAGACACTCACTGATTGATAGGACAAAAGAGGCCAAATCTGAGTGAGGCAAGAGTTGGACCTTGGAAGGTAATGCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529496.1
ENST00000532060.1
ENST00000533755.5
ENST00000534434.2