RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000143549

Ensembl transcript IDs: ENST00000323144.12, ENST00000341485.10, ENST00000368527.7, ENST00000368530.7, ENST00000368531.6, ENST00000368533.8, ENST00000368545.7, ENST00000466010.1, ENST00000469717.5, ENST00000504663.1, ENST00000513769.5, ENST00000515609.1, ENST00000611659.4, ENST00000651641.1, ENST00000651644.1, ENST00000651731.1, ENST00000651873.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTaGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCACACAGCCG +
Preference number: 1 (lower is better)
Translates to: IHVRPPGQNAGNARH*RLKSSFQSYPLTQP
Trigger: CGGCTGTGTGAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGACGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR GCA 90 bp TTGCTGTGTTGCCCAGGCTGGAGTACTACAGTGGCTATTTATAGGTaGAATCCCACTACTGATCAGCACAGGAATTTTGACCTGCTCCAT +
Preference number: 1 (lower is better)
Translates to: LLCCPGWSTTVAIYR*NPTTDQHRNFDLLH
Trigger: ATGGAGCAGGTCAAAATTCCTGTGCTGATCAGTAGTGGGATTGCACCTATAAATAGCCACTGTAGTACTCCAGCCTGGGCAACACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CCA 90 bp ACTTCATTGTCCACTTTGGTACCCCAGTTTGTTGGTCTCTATCCTTaGCTCACACTAGTCATACCGCAAGGAAAACAGGAGATACCACAG +
Preference number: 1 (lower is better)
Translates to: TSLSTLVPQFVGLYP*LTLVIPQGKQEIPQ
Trigger: CTGTGGTATCTCCTGTTTTCCTTGCGGTATGACTAGTGTGAGCCAAGGATAGAGACCAACAAACTGGGGTACCAAAGTGGACAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CCA 90 bp ATGGTTCTAATTTACCTCCATGGCATAAACTACCTGTACCCCATATaGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCCCTA +
Preference number: 1 (lower is better)
Translates to: MVLIYLHGINYLYPI*IPNSLMSTSLPHAL
Trigger: TAGGGCGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGTAGTTTATGCCATGGAGGTAAATTAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR TCA 90 bp GAAGTTACAAGAACTAGAAGTAAATTTCAAGGTCTACCCGCTCTTTaGGACTTGCTCCTGTTGCAGAGAAGCTGCAGACTGATAAAGCAG +
Preference number: 1 (lower is better)
Translates to: EVTRTRSKFQGLPAL*DLLLLQRSCRLIKQ
Trigger: CTGCTTTATCAGTCTGCAGCTTCTCTGCAACAGGAGCAAGTCTCAAAGAGCGGGTAGACCTTGAAATTTACTTCTAGTTCTTGTAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR TCA 90 bp TCTAATCTGTCTAGCAAGCAAACCACTCTGACTGCTCTAAAGAGGTaGGGAAAATACTCAAATCTTCAACTCAGAGAAGGTGATGGCAAC +
Preference number: 1 (lower is better)
Translates to: SNLSSKQTTLTALKR*GKYSNLQLREGDGN
Trigger: GTTGCCATCACCTTCTCTGAGTTGAAGATTTGAGTATTTTCCTCACCTCTTTAGAGCAGTCAGAGTGGTTTGCTTGCTAGACAGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR TCA 90 bp TCTAAAGAGGTGAGGAAAATACTCAAATCTTCAACTCAGAGAAGGTaGTGGCAACACAGACCCATATTCATATCCCACAACTTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: SKEVRKILKSSTQRR*WQHRPIFISHNFSF
Trigger: GAAAGAAAAGTTGTGGGATATGAATATGGGTCTGTGTTGCCATCACCTTCTCTGAGTTGAAGATTTGAGTATTTTCCTCACCTCTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR GCA 90 bp TTTTATTGCCTGACTAAATCACAGAACACAGAGTTTCCTAGGAATTaGATGAGGTCAGAAAGACAAATGCAGCTGTTCTCTCACTTTGAA +
Preference number: 1 (lower is better)
Translates to: FYCLTKSQNTEFPRN*MRSERQMQLFSHFE
Trigger: TTCAAAGTGAGAGAACAGCTGCATTTGTCTTTCTGACCTCATGCAATTCCTAGGAAACTCTGTGTTCTGTGATTTAGTCAGGCAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR TCA 90 bp TTTTGCCCACATAACAATACCCTCTTGAAATGGCTCACCGGAGTTTaGACATTGCAAACAATAGAAACATCAGAATCTCAGATTATAAAG +
Preference number: 1 (lower is better)
Translates to: FCPHNNTLLKWLTGV*TLQTIETSESQIIK
Trigger: CTTTATAATCTGAGATTCTGATGTTTCTATTGTTTGCAATGTTCAAACTCCGGTGAGCCATTTCAAGAGGGTATTGTTATGTGGGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTaGCCTTCTCATCTCTATCAATGCCTTTATTATTTTGTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: TTCSLLCLNLPLELL*PSHLYQCLYYFVSL
Trigger: AAGAGAAACAAAATAATAAAGGCATTGATAGAGATGAGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR GCA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCACCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: SGLQARMQEMPDTGVSKAPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR GCA 90 bp GTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCTATATTAAATCCTGTTaGTCCAGCTGGGTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: VRPPGQNAGNARHWRLKSYIKSC*SSWVRW
Trigger: CCACCGCACCCAGCTGGAGCAACAGGATTTAATATA...GCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCCCATCCTAATGCCTTaGGGACCAGCCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTPILMP*GPARLT
Trigger: GGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGG...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp TCAACGGAAAATTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAATCCTGTTGCTCCAGCTaGGTGCGGTGGCTCACGCCC +
Preference number: 2 (lower is better)
Translates to: STENCAVSGINSSTLSRESCCSS*VRWLTP
Trigger: GGGCGTGAGCCACCGCACCCAGCTGGAGCAACAGGA...TTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAATTTTCCGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR GCA 90 bp TTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACCGTGTATTTTCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: LCSLWDKQLDFVKGTVYFPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...AAAATACACGGTTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR TCA 90 bp CTTGTTGTTCTCCACTCCCAGGAGGTCACCATACTGATGCCAAATTTAGTGAGGCTGGTCTCGAACTCATaGCCTCAGGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: LVVLHSQEVTILMPNLVRLVSNS*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCATGAGTTCGAGACCAG...CCTCACTAAATTTGGCATCAGTATGGTGACCTCCTGGGAGTGGAGAACAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR TCA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGTATATAGTTCAGCCTaGGATGTCAGTGTTAACCTA +
Preference number: 2 (lower is better)
Translates to: SGLQARMQEMPDTGVSKAVYSSA*DVSVNL
Trigger: TAGGTTAACACTGACATCTCAGGCTGAACTATATAC...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR TCA 90 bp GTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCCTAAGCAAATACTCTTaGGAGCACTTGTTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: VRPPGQNAGNARHWRLKSLSKYS*EHLLFS
Trigger: AGAAAACAACAAGTGCTCTCAAGAGTATTTGCTTAG...GCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR GCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGACAGGAATTTTGACCTaGTCCATTTCCGACCTGGGC +
Preference number: 2 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTTGILT*SISDLG
Trigger: GCCCAGGTCGGAAATGGAGCAGGTCAAAATTCCTGT...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp AAAATGTATATAGTTCAGCCTGAGATGTCAGTGTTAACCTATAAAAGGCCCAGCTCCTGTTGCTCCAGCTaGGTGCGGTGGCTCACGCCC +
Preference number: 2 (lower is better)
Translates to: KMYIVQPEMSVLTYKRPSSCCSS*VRWLTP
Trigger: GGGCGTGAGCCACCGCACCCAGCTGGAGCAACAGGA...GCTGGGCCTTTTATAGGTTAACACTGACATCTCAGGCTGAACTATATACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTAATCCAGAGCGAGAGTaGGGCCTTGGGTTCCCCGAG +
Preference number: 2 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSNPERE*GLGFPE
Trigger: CTCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATT...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR TCA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTTCAATGGCTTCTCAATaGCACCACACCAAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRSMASQ*HHTKGG
Trigger: TCCTCCTTTGGTGTGGTGTCATTGAGAAGCCATTGA...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTACAGGCTGGAATGCAGTaGCGCGATCTCCGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLQAGMQ*RDLRSL
Trigger: CAGTGAGCGGAGATCGCGCCACTGCATTCCAGCCTG...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR TCA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCCAGCCAGGATGGTCTTaGTCTCCTGACCTCGTGATC +
Preference number: 2 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSQPGWS*SPDLVI
Trigger: GATCACGAGGTCAGGAGATCAAGACCATCCTGGCTG...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR GCA 90 bp CCCATGGAGTTGGATAGTATTCAACCAACACCATGTGAAAGGAAGAGATTTGGTCTGAGGTGGGAGAACTaGTTGAACCCAGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PMELDSIQPTPCERKRFGLRWEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAGTTCTCCCACCTCAG...ACCAAATCTCTTCCTTTCACATGGTGTTGGTTGAATACTATCCAACTCCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAACAATCAGCTTTTTGTTaGGGTCCAGGTCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQQSAFC*GPGQWC
Trigger: ACACCACTGACCTGGACCCCAACAAAAAGCTGATTG...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CCA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCACTGTTTCAGTACAGTTaGTTAAAACCACGCATTTAT +
Preference number: 2 (lower is better)
Translates to: SGLQARMQEMPDTGVSKALFQYS*LKPRIY
Trigger: ATAAATGCGTGGTTTTAACCAACTGTACTGAAACAG...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR CAA 90 bp TCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCCCTAGAATTTaGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTATCTTCTT +
Preference number: 2 (lower is better)
Translates to: SQLSYVNLSASRPRI*FSPRYLPDCQPYLL
Trigger: AAGAAGATACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR GCA 90 bp ACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCACACAGCCGGCCTCAAGAATAAATCCTGTTaGTACCACCCACAAAGATGC +
Preference number: 2 (lower is better)
Translates to: TLASQKQLSKLSTHTAGLKNKSC*YHPQRC
Trigger: GCATCTTTGTGGGTGGTAGCAACAGGATTTATTCTT...GAGGCCGGCTGTGTGAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR GCA 90 bp TTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACCGTGTATTTTCCAGAATGCAGGAAATaGCAGACACTGGCGTCTCAA +
Preference number: 2 (lower is better)
Translates to: LCSLWDKQLDFVKGTVYFPECRK*QTLASQ
Trigger: TTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGG...AAAATACACGGTTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTAATTAGCTGGGTGTGGTaGCAGGCGCCTGTGATCTCA +
Preference number: 2 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLISWVW*QAPVIS
Trigger: TGAGATCACAGGCGCCTGCCACCACACCCAGCTAAT...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 90 bp TACTTCATTGTCCACTTTGGTACCCCAGTTTGTTGGTCTCTATCCTaGGCTCACACTAGTCATACCGCAAGGAAAACAGGAGATACCACA +
Preference number: 2 (lower is better)
Translates to: YFIVHFGTPVCWSLS*AHTSHTARKTGDTT
Trigger: TGTGGTATCTCCTGTTTTCCTTGCGGTATGACTAGTGTGAGCCAAGGATAGAGACCAACAAACTGGGGTACCAAAGTGGACAATGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp ATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGCAATCAGCTTTTTGTTaGGGTCCAGGTCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: MQGNISYSQCPSERAANKQSAFC*GPGQWC
Trigger: ACACCACTGACCTGGACCCCAACAAAAAGCTGATTG...CTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CCA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCAATAGGTCTGAGGGTTaGAGGGACTGGTTCTTTATT +
Preference number: 2 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLNRSEG*RDWFFI
Trigger: AATAAAGAACCAGTCCCTCCAACCCTCAGACCTATT...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp GTATTTTTACTAGAAGTCAGATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAAATAGGTCTGAGGGTTaGAGGGACTGGTTCTTTATT +
Preference number: 2 (lower is better)
Translates to: VFLLEVRFTSGLQARMQENRSEG*RDWFFI
Trigger: AATAAAGAACCAGTCCCTCCAACCCTCAGACCTATT...TTCCTGCATTCTGGCCTGGAGGCCGGACGTGAATCTGACTTCTAGTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp TTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACCGTGTATTTTGGAAATGCCAGACACTaGCGTCTCAAAAGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: LCSLWDKQLDFVKGTVYFGNARH*RLKSSF
Trigger: AAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCC...AAAATACACGGTTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTATACCTGAAGAGAGAATaGAAACACTGCAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLYLKRE*KHCRQD
Trigger: ATCCTGCCTGCAGTGTTTCCATTCTCTCTTCAGGTA...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR GCA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCAAGAATAAATCCTGTTaGTACCACCCACAAAGATGC +
Preference number: 2 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLKNKSC*YHPQRC
Trigger: GCATCTTTGTGGGTGGTAGCAACAGGATTTATTCTT...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp TACCCATTACATGCCTTCTTCCATGAGTTTTTCCAATTCATTCCCACTAGGATCCTGTGTTGCCCAGGCTaGAGTACTACAGTGGCTATT +
Preference number: 2 (lower is better)
Translates to: YPLHAFFHEFFQFIPTRILCCPG*STTVAI
Trigger: AATAGCCACTGTAGTACTCCAGCCTGGGCAACACAG...GATCCTAGTGGGAATGAATTGGAAAAACTCATGGAAGAAGGCATGTAATGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR GCA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCCAGTCACACAGATCATaGAGCGTTAGCTTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: PFIVKNIHAREHILQSVPQSHRS*SVSFSS
Trigger: TGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTG...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR-3UTR CCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTAACTTTATTGCCAGGCTaGTCTCGAACTCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLTLLPG*SRTPGF
Trigger: GAATCCAGGAGTTCGAGACCAGCCTGGCAATAAAGT...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 90 bp CTATCAACGGAAAATTGTGCAGTCTCTGGGATAAACAGCTCGACTTaGTCAAGGGAACCGTGTATTTTTACTAGAAGTCAGATTCACGTC +
Preference number: 2 (lower is better)
Translates to: LSTENCAVSGINSST*SREPCIFTRSQIHV
Trigger: GACGTGAATCTGACTTCTAGTAAAAATACACGGTTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAATTTTCCGTTGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CCA 90 bp CCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAACAGAAACTTCACAATaGTCAACTTCACAATGCTGT +
Preference number: 2 (lower is better)
Translates to: PCKGTYPTVSAQVKEQQITETSQ*STSQCC
Trigger: ACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGT...TATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CCA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCGCTGGAGTACTACAGTaGCTATTTATAGGTGCAATC +
Preference number: 2 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSAGVLQ*LFIGAI
Trigger: GATTGCACCTATAAATAGCCACTGTAGTACTCCAGC...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 90 bp TGGAGTTGGATAGTATTCAACCAACACCATGTGAAAGGAAGAGATTaGGTTGGGGCTAAGATAAAGCTGCCAAACAGAATAGGTCTAAGA +
Preference number: 2 (lower is better)
Translates to: WSWIVFNQHHVKGRD*VGAKIKLPNRIGLR
Trigger: TCTTAGACCTATTCTGTTTGGCAGCTTTATCTTAGCCCCAACCAAATCTCTTCCTTTCACATGGTGTTGGTTGAATACTATCCAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 90 bp CTGCCGATGAAGCAGTTACAACAACTTGTCAAGTCAGTCCTTTTATaGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LPMKQLQQLVKSVLL*LKTSMQGNISYSQC
Trigger: GCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGACTGACTTGACAAGTTGTTGTAACTGCTTCATCGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR-3UTR TCA 90 bp TACCCATTACATGCCTTCTTCCATGAGTTTTTCCAATTCATTCCCACTAGGATCCCAGGAAGTGTCAGCTaGATAAATGAATCTGAACCT +
Preference number: 2 (lower is better)
Translates to: YPLHAFFHEFFQFIPTRIPGSVS*INESEP
Trigger: AGGTTCAGATTCATTTATTCAGCTGACACTTCCTGG...GATCCTAGTGGGAATGAATTGGAAAAACTCATGGAAGAAGGCATGTAATGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR TCA 90 bp ACTTGTCAAGTCAGTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCTTTAATGGGCATCATTaGGCCCTGCCCATCAGTCAC +
Preference number: 2 (lower is better)
Translates to: TCQVSPFIVKNIHAREHIFNGHH*ALPISH
Trigger: GTGACTGATGGGCAGGGCTCAATGATGCCCATTAAA...GATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGACTGACTTGACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR-3UTR CCA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTCAATCAGCTTTTTGTTaGGGTCCAGGTCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSQSAFC*GPGQWC
Trigger: ACACCACTGACCTGGACCCCAACAAAAAGCTGATTG...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CCA 90 bp ATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGACAGAAACTTCACAATaGTCAACTTCACAATGCTGT +
Preference number: 2 (lower is better)
Translates to: MQGNISYSQCPSERAANKTETSQ*STSQCC
Trigger: ACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGT...CTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CCA 90 bp TTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACCGTGTATTTTCTGTTTCAGTACAGTTaGTTAAAACCACGCATTTAT +
Preference number: 2 (lower is better)
Translates to: LCSLWDKQLDFVKGTVYFLFQYS*LKPRIY
Trigger: ATAAATGCGTGGTTTTAACCAACTGTACTGAAACAG...AAAATACACGGTTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR CAA 90 bp GACACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATaGTGGCCTTCTCATCTCTATCAATGCCTTTATTATTTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: DTTCSLLCLNLPLEL*WPSHLYQCLYYFVS
Trigger: AGAAACAAAATAATAAAGGCATTGATAGAGATGAGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTAAAATACATACCCTGCTaGGAAACTAAAGTACTAAGT +
Preference number: 2 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLKYIPC*ETKVLS
Trigger: ACTTAGTACTTTAGTTTCCCAGCAGGGTATGTATTT...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 90 bp AAACAGAATAGGTCTAAGATAAAGCTGCCAAACAGAATAGGTCAGTaGTACCTATCAGATAACTTGGGGTTACTACATCTTATTCCTTAT +
Preference number: 2 (lower is better)
Translates to: KQNRSKIKLPNRIGQ*YLSDNLGLLHLIPY
Trigger: ATAAGGAATAAGATGTAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTTTATCTTAGACCTATTCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp CTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTaGGGTTCCCCGAGGAGTAAA +
Preference number: 3 (lower is better)
Translates to: LPHPNALGTSQADPNGIQSESGA*GSPRSK
Trigger: TTTACTCCTCGGGGAACCCAAGGCCCCACTCTCGCT...CTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
3UTR GCA 72 bp GAGGCAGGAGAATCTCTTGAACCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGAGCCATTACGCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: EAGESLEPGGGG*SEPRSSHYAPA
Trigger: GGCTGGAGCGTAATGGCTCGATCTCGGCTCACTGCAACCTCCGCCTCCTGGTTCAAGAGATTCTCCTGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR-3UTR CAA 90 bp ATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAGGCAGGAGAATCTCTaGAACCAGGAGGCGGAGGTT +
Preference number: 3 (lower is better)
Translates to: IHVRPPGQNAGNARHWRLRQENL*NQEAEV
Trigger: AACCTCCGCCTCCTGGTTCAAGAGATTCTCCTGCCT...GAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGACGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR TCA 72 bp GTCTCATTCTGCCACCCAGGATGGAGTGCAGCAGTGTaGTCACAGCTTGCTGCAGCCTCAGACTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: VSFCHPGWSAAV*SQLAAASDSWA
Trigger: AGCCCAGGAGTCTGAGGCTGCAGCAAGCTGTGATCACACTGCTGCACTCCATCCTGGGTGGCAGAATGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp ACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCACACAGCCGGCCTCAGGCAGGAGAATCTCTaGAACCAGGAGGCGGAGGTT +
Preference number: 3 (lower is better)
Translates to: TLASQKQLSKLSTHTAGLRQENL*NQEAEV
Trigger: AACCTCCGCCTCCTGGTTCAAGAGATTCTCCTGCCT...GAGGCCGGCTGTGTGAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR GCA 72 bp GCAATCCCACTACTGATCAGCACAGGAATTTTGACCTaGTCCATTTCCGACCTGGGCCAGTTCACCCCTTCT +
Preference number: 3 (lower is better)
Translates to: AIPLLISTGILT*SISDLGQFTPS
Trigger: AGAAGGGGTGAACTGGCCCAGGTCGGAAATGGAGCAGGTCAAAATTCCTGTGCTGATCAGTAGTGGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR GCA 72 bp GCATCATTGAGCCCTGCCCATCAGTCACACAGATCATaGAGCGTTAGCTTCAGCTCATTAGAAAGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: ASLSPAHQSHRS*SVSFSSLESRR
Trigger: CCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTGATGGGCAGGGCTCAATGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CCA 72 bp CGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTaGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTC +
Preference number: 3 (lower is better)
Translates to: RPPGQNAGNARH*RLKSSFQSYPL
Trigger: GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
3UTR GCA 72 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTaGCAGATTGTCAGCCGTATCTTCTTTCCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: PHALEFCFHPDT*QIVSRIFFPFP
Trigger: GGGGAAGGGAAAGAAGATACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTAAGCGAGAGTGGGGCCTaGGGTTCCCCGAGGAGTAAA +
Preference number: 3 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLSESGA*GSPRSK
Trigger: TTTACTCCTCGGGGAACCCAAGGCCCCACTCTCGCT...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTAGACAGGAGAATCGCTaGAACTCAAGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRRQENR*NSRSRG
Trigger: ACCTCTGCTTCTTGAGTTCAAGCGATTCTCCTGTCT...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp AAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCATA +
Preference number: 3 (lower is better)
Translates to: KHPCKGTYPTVSAQVKEQAVSLK*AVETLI
Trigger: TATGAGCGTCTCTACAGCCAACTTGAGCGAAACCGC...CTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CCA 72 bp TCCACTTTGGTACCCCAGTTTGTTGGTCTCTATCCTTaGCTCACACTAGTCATACCGCAAGGAAAACAGGAG +
Preference number: 3 (lower is better)
Translates to: STLVPQFVGLYP*LTLVIPQGKQE
Trigger: CTCCTGTTTTCCTTGCGGTATGACTAGTGTGAGCCAAGGATAGAGACCAACAAACTGGGGTACCAAAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp GGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGGGTGGAAACAATCAGCTTTTTGTaGGGGTCCAGGTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: GTYPTVSAQVKEQQIRVETISFL*GSRSVV
Trigger: CACCACTGACCTGGACCCCAACAAAAAGCTGATTGT...TTCCACCCTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CAA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTTACATAAGTTGCTTTTaGCTCCCCCATCCTAATGCC +
Preference number: 3 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRYISCF*LPHPNA
Trigger: GGCATTAGGATGGGGGAGCAAAAAGCAACTTATGTA...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTTACAGGCAAGTGCCATaGCACCCAGCTAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRYRQVP*HPAKRK
Trigger: TTTTCTTTTAGCTGGGTGCAATGGCACTTGCCTGTA...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGACAACCCAACTCTGCTaGTCAAAAATCCACTTTTGG +
Preference number: 3 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTTTQLC*SKIHFW
Trigger: CCAAAAGTGGATTTTTGACAAGCAGAGTTGGGTTGT...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR GCA 72 bp TTTCCTCCTCACATCAAGTGGCCAGGCCTTTCACAATaGCTGTCTTTATTTAGTGCTATCTCTCCTGCCACT +
Preference number: 3 (lower is better)
Translates to: FPPHIKWPGLSQ*LSLFSAISPAT
Trigger: AGTGGCAGGAGAGATAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTATGGTACCCCAGTTTGTaGGTCTCTATCCTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLWYPSL*VSILGS
Trigger: TGAGCCAAGGATAGAGACCAACAAACTGGGGTACCA...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CCA 72 bp ATTTACCTCCATGGCATAAACTACCTGTACCCCATATaGATTCCCAACTCTCTTATGTCAACCTCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: IYLHGINYLYPI*IPNSLMSTSLP
Trigger: AGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGTAGTTTATGCCATGGAGGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp AGGGACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATACAATCAGCTTTTTGTaGGGGTCCAGGTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: RDRNFTMVNFTMLLGNQHTISFL*GSRSVV
Trigger: CACCACTGACCTGGACCCCAACAAAAAGCTGATTGT...ATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CAA 90 bp GTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCACAATCAGCTTTTTGTaGGGGTCCAGGTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: VLLLLKTSMQGNISYSQCTISFL*GSRSVV
Trigger: CACCACTGACCTGGACCCCAACAAAAAGCTGATTGT...GCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CAA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGACAATCAGCTTTTaGTTGGGGTCCAGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: PFIVKNIHAREHILQSVPKTISF*LGSRSV
Trigger: CACTGACCTGGACCCCAACAAAAAGCTGATTGTCTT...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR TCA 72 bp GAATGTGTATTGAGAGTCACTTCAATGGCTTCTCAATaGCACCACACCAAAGGAGGAATACCTGAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: ECVLRVTSMASQ*HHTKGGIPEER
Trigger: TCTCTCTTCAGGTATTCCTCCTTTGGTGTGGTGTCATTGAGAAGCCATTGAAGTGACTCTCAATACACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR-3UTR CAA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCCTACCTTTAGAGCTATaGTGGCCTTCTCATCTCTAT +
Preference number: 3 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSLPLEL*WPSHLY
Trigger: ATAGAGATGAGAAGGCCACAATAGCTCTAAAGGTAG...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR TCA 72 bp CTAAATCACAGAACACAGAGTTTCCTAGGAATTGCATaGGGTCAGAAAGACAAATGCAGCTGTTCTCTCACT +
Preference number: 3 (lower is better)
Translates to: LNHRTQSFLGIA*GQKDKCSCSLT
Trigger: AGTGAGAGAACAGCTGCATTTGTCTTTCTGACCTCATGCAATTCCTAGGAAACTCTGTGTTCTGTGATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR TCA 72 bp GTGAGGAAAATACTCAAATCTTCAACTCAGAGAAGGTaGTGGCAACACAGACCCATATTCATATCCCACAAC +
Preference number: 3 (lower is better)
Translates to: VRKILKSSTQRR*WQHRPIFISHN
Trigger: GTTGTGGGATATGAATATGGGTCTGTGTTGCCATCACCTTCTCTGAGTTGAAGATTTGAGTATTTTCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR TCA 72 bp TCTAGCAAGCAAACCACTCTGACTGCTCTAAAGAGGTaGGGAAAATACTCAAATCTTCAACTCAGAGAAGGT +
Preference number: 3 (lower is better)
Translates to: SSKQTTLTALKR*GKYSNLQLREG
Trigger: ACCTTCTCTGAGTTGAAGATTTGAGTATTTTCCTCACCTCTTTAGAGCAGTCAGAGTGGTTTGCTTGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR-3UTR CAA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTAAGACAATCAGCTTTTaGTTGGGGTCCAGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSKTISF*LGSRSV
Trigger: CACTGACCTGGACCCCAACAAAAAGCTGATTGTCTT...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR-3UTR CAA 90 bp AGAAACATCAGAATCTCAGATTATAAAGAGCACAGGAAGATCCTCATGCACTACAGTTGTAAGCAAACCTaGAGATTGCTGCAGAGCTAT +
Preference number: 3 (lower is better)
Translates to: RNIRISDYKEHRKILMHYSCKQT*RLLQSY
Trigger: ATAGCTCTGCAGCAATCTCAAGGTTTGCTTACAACT...GTAGTGCATGAGGATCTTCCTGTGCTCTTTATAATCTGAGATTCTGATGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR TCA 72 bp ACTTTTCTAGGTTTTGCCCACATAACAATACCCTCTTaGAATGGCTCACCGGAGTTTGAACATTGCAAACAA +
Preference number: 3 (lower is better)
Translates to: TFLGFAHITIPS*NGSPEFEHCKQ
Trigger: TTGTTTGCAATGTTCAAACTCCGGTGAGCCATTTCAAGAGGGTATTGTTATGTGGGCAAAACCTAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CCA 72 bp TTTGCAATTGTCCTTCATGGTTCTAATTTACCTCCATaGCATAAACTACCTGTACCCCATATGGATTCCCAA +
Preference number: 3 (lower is better)
Translates to: FAIVLHGSNLPP*HKLPVPHMDSQ
Trigger: TTGGGAATCCATATGGGGTACAGGTAGTTTATGCCATGGAGGTAAATTAGAACCATGAAGGACAATTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CCA 72 bp ATTAGCACTAATTACATAGTACTTCATTGTCCACTTTaGTACCCCAGTTTGTTGGTCTCTATCCTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: ISTNYIVLHCPL*YPSLLVSILGS
Trigger: TGAGCCAAGGATAGAGACCAACAAACTGGGGTACCAAAGTGGACAATGAAGTACTATGTAATTAGTGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR GCA 72 bp GGAATGCTCAATATTCACTATCCCACAACCCAACTCTaGTTGTCAAAAATCCACTTTTGGAACCCAATAAAA +
Preference number: 3 (lower is better)
Translates to: GMLNIHYPTTQL*LSKIHFWNPIK
Trigger: TTTTATTGGGTTCCAAAAGTGGATTTTTGACAAGCAGAGTTGGGTTGTGGGATAGTGAATATTGAGCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR TCA 72 bp AGTTGTAAGCAAACCTTGAGATTGCTGCAGAGCTATTaGACAGAACTAGCTTGTGACAGTTACTTGAAATTA +
Preference number: 3 (lower is better)
Translates to: SCKQTLRLLQSY*TELACDSYLKL
Trigger: TAATTTCAAGTAACTGTCACAAGCTAGTTCTGTTCAATAGCTCTGCAGCAATCTCAAGGTTTGCTTACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CCA 72 bp TCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTaGCCTTCTCATCTCTATCAATGCCTTTATTATTTT +
Preference number: 3 (lower is better)
Translates to: SLLCLNLPLELL*PSHLYQCLYYF
Trigger: AAAATAATAAAGGCATTGATAGAGATGAGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAGGGGACCAGCCAGGCTaGCCCAAATGGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ARLTQMESRARVGPWVPRGDQPG*PKWNPE
Trigger: CTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCC...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCCCATCCTAATGCCTTaGGGACCAGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPPILMP*GPARLT
Trigger: GGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCAGGCTGGAATGCAGTaGCGCGATCTCCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPQAGMQ*RDLRSL
Trigger: CAGTGAGCGGAGATCGCGCCACTGCATTCCAGCCTG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTGGGGACCAGCCAGGCTaGCCCAAATGGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPARLTQMESRARVGPWVGDQPG*PKWNPE
Trigger: CTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCC...AACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCCATCCTAATGCCTTaGGGACCAGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: TSQADPNGIQSESGALGSPILMP*GPARLT
Trigger: GGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGG...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR TCA 90 bp GCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAGGAGTAGGCAGAGGTTGCAGTaGGCTGAGATCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: ADPNGIQSESGALGSPRSRQRLQ*AEIRPL
Trigger: CAGTGGCCTGATCTCAGCTCACTGCAACCTCTGCCT...ACTCCTCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGTGCTCAGCTTCAGCTTaGTCTGCCCGATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGPARLTQMESRARVGPWCSASA*SARSRA
Trigger: TGCTCTGGATCGGGCAGAGCAAGCTGAAGCTGAGCA...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR GCA 90 bp GCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCAGTGTGATCACAGCTTaGTGCAGCCTCAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: ALGTSQADPNGIQSESGASVITA*CSLRLL
Trigger: CAGGAGTCTGAGGCTGCAGCAAGCTGTGATCACACT...GGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp GCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAGGAGTCCAGGAGGCGGAGCTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: ADPNGIQSESGALGSPRSPGGGA*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAAGCTCCGCCTCCTGG...ACTCCTCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCTCACCTGTGAACACTaGAGAACTGGAGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPLTCEH*RTGDWG
Trigger: GCCCCAGTCTCCAGTTCTCCAGTGTTCACAGGTGAG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAATCCAGAGCGAGAGTaGGGCCTTGGGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: CSPILMPWGPARLTQMESNPERE*GLGFPE
Trigger: CTCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATT...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp CTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAATCCAGAGCGAGAGTaGGGCCTTGGGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LPHPNALGTSQADPNGIQNPERE*GLGFPE
Trigger: CTCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATT...CTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGCCATGTTGGCCGAGCTaGTCTCGAACTCATGACCTC +
Preference number: 4 (lower is better)
Translates to: WGPARLTQMESRARVGPWPCWPS*SRTHDL
Trigger: GAGGTCATGAGTTCGAGACCAGCTCGGCCAACATGG...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCGAGGTTGCAGTGAGCTaGGATCAGGCCACTGAACTC +
Preference number: 4 (lower is better)
Translates to: TSQADPNGIQSESGALGSEVAVS*DQATEL
Trigger: GAGTTCAGTGGCCTGATCTCAGCTCACTGCAACCTC...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp GCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCACAGGAATTTTGACCTaGTCCATTTCCGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGTSQADPNGIQSESGATGILT*SISDLG
Trigger: GCCCAGGTCGGAAATGGAGCAGGTCAAAATTCCTGT...GGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCGACACAAATGCAGGGTaGCATGAGGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPDTNAG*HEVSSS
Trigger: GCTGCTGGAAACCTCATGCCACCCTGCATTTGTGTC...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp GGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTGCTCCATTTCCGACCTaGGCCAGTTCACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GPARLTQMESRARVGPWVAPFPT*ASSPLL
Trigger: AAGAAGGGGTGAACTGGCCCAGGTCGGAAATGGAGC...AACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGCTCGGGAGGCTGAGGTaGGAGAACTGCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LPHPNALGTSQADPNGIQLGRLR*ENCLNP
Trigger: TGGGTTCAAGCAGTTCTCCCACCTCAGCCTCCCGAG...CTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGCCTCCTCACATCAAGTaGCCAGGCCTTTCACAATGC +
Preference number: 4 (lower is better)
Translates to: WGPARLTQMESRARVGPWPPHIK*PGLSQC
Trigger: GCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAGG...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCAAGCAGAGGTTGCAGTaGGCCATGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: TSQADPNGIQSESGALGSKQRLQ*AMISPL
Trigger: CAGTGGTGAGATCATGGCTCACTGCAACCTCTGCTT...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp GGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTAGCTTCAGCTTGCTCTaGCCGATCCAGAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: GPARLTQMESRARVGPWVSFSLL*PIQSIL
Trigger: GAGAATGCTCTGGATCGGGCAGAGCAAGCTGAAGCT...AACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR GCA 90 bp ATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCACCCTTACTTCCGCCTaGTACGCCCTGAAATACCGG +
Preference number: 4 (lower is better)
Translates to: IHVRPPGQNAGNARHWRLTLTSA*YALKYR
Trigger: CCGGTATTTCAGGGCGTAGCAGGCGGAAGTAAGGGT...GAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGACGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611659.4
CDS-3UTR TCA 90 bp ATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGAAATGCAGGGTGGCATaGGGTTTCCAGCAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: MPWGPARLTQMESRARVGKCRVA*GFQQLN
Trigger: GTTAAGCTGCTGGAAACCTCATGCCACCCTGCATTT...CCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAACGAGGTCAGGAGTTTaGGATCAGCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: ARLTQMESRARVGPWVPRTRSGV*DQPNML
Trigger: CAACATGTTAGGCTGATCTCAAACTCCTGACCTCGT...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCTCTTCTGCCTGCTTCTaGTCAGCTTCAGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSQADPNGIQSESGALGSSSACF*SASACS
Trigger: AGAGCAAGCTGAAGCTGAGCAGAAGCAGGCAGAAGA...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAAAAATTAGCCGGGCTTaGTTGCACGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ARLTQMESRARVGPWVPRKISRA*LHVPVI
Trigger: GATTACAGGCACGTGCAACCAAGCCCGGCTAATTTT...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCTCAATGGCTTCTCAATaGCACCACACCAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CSPILMPWGPARLTQMESSMASQ*HHTKGG
Trigger: TCCTCCTTTGGTGTGGTGTCATTGAGAAGCCATTGA...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGATTTACTTCTTTCTTCTaGCTGCTTCTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ARLTQMESRARVGPWVPRFTSFF*LLLLSF
Trigger: GAAGCTGAGCAGAAGCAGGCAGAAGAAAGAAGTAAA...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp GTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCGGAAATGCCAGACACTaGCGTCTCAAAAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VRPPGQNAGNARHWRLKSGNARH*RLKSSF
Trigger: AAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCC...GCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp TCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGACTGTGTTGCCCAGGCTaGAGTACTACAGTGGCTATT +
Preference number: 4 (lower is better)
Translates to: SPILMPWGPARLTQMESRLCCPG*STTVAI
Trigger: AATAGCCACTGTAGTACTCCAGCCTGGGCAACACAG...TCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGTTGTTTCTCTTTAAATaGAATGCTCAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WGPARLTQMESRARVGPWLFLFK*NAQARC
Trigger: GCACCTGGCCTGAGCATTCCATTTAAAGAGAAACAA...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp GGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCTTCATTGTCCACTTTaGTACCCCAGTTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GPARLTQMESRARVGPWVLHCPL*YPSLLV
Trigger: GACCAACAAACTGGGGTACCAAAGTGGACAATGAAG...AACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp TCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGACAACAGCTTTGTCAATaGCACAAATGCAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPILMPWGPARLTQMESRQQLCQ*HKCRVA
Trigger: TGCCACCCTGCATTTGTGTCATTGACAAAGCTGTTG...TCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTACACTGCAGGCAGGATaGTTTAAGAACCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: GPARLTQMESRARVGPWVTLQAG*FKNLEI
Trigger: TATTTCCAGGTTCTTAAATCATCCTGCCTGCAGTGT...AACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGCAATGTAGGCAGCAATaGATATGGAAAAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: WGPARLTQMESRARVGPWQCRQQ*IWKKPS
Trigger: TGATGGCTTTTTCCATATTCATTGCTGCCTACATTG...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATTCCTGTTGCTCCAGCTaGGTGCGGTGGCTCACGCCC +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYSCCSS*VRWLTP
Trigger: GGGCGTGAGCCACCGCACCCAGCTGGAGCAACAGGA...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGGAAATGCCAGACACTaGCGTCTCAAAAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SGLQARMQEMPDTGVSKAGNARH*RLKSSF
Trigger: AAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCC...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTGCAGCCTCAGACTCCTaGGCTCAAAGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRAASDS*AQRILW
Trigger: CCAGAGGATCCTTTGAGCCCAGGAGTCTGAGGCTGC...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCCAATCAGTTCCATTTaGTTCCTCCTCTTACATAAC +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPPISSI*FLLLHN
Trigger: GTTATGTAAGAGGAGGAACCAAATGGAACTGATTGG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
3UTR CAA 72 bp CTTCAGCTCATTAGAAAGCAGGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCATATTGGCCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LQLIRKQAVSLK*AVETLILARLV
Trigger: GACCAGCCTGGCCAATATGAGCGTCTCTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR TCA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCCCGCCTGCTACGCCCTaGAATACCGGAACTCACCAA +
Preference number: 4 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLPPATP*NTGTHQ
Trigger: TTGGTGAGTTCCGGTATTTCAGGGCGTAGCAGGCGG...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611659.4
CDS-3UTR TCA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGACACAAAAGTGGCTTTaGTTACATAAGTCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGTSQADPNGIQSESGALTQKWL*LHKSEE
Trigger: CTCCTCTGACTTATGTAATCAAAGCCACTTTTGTGT...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp TCAACGGAAAATTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: STENCAVSGINSSTLSREPGGGG*SEPRSS
Trigger: GCTCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...TTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAATTTTCCGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCCCAGGCCTTTCACAATaGCTGTCTTTATTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: CSPILMPWGPARLTQMESPGLSQ*LSLFSA
Trigger: AGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGG...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCCACCCAGGATGGAGTaGAGCAGTGTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTPPRME*SSVITA
Trigger: AGCTGTGATCACACTGCTGCACTCCATCCTGGGTGG...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCTCACCTGTGAACACTaGAGAACTGGAGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTLTCEH*RTGDWG
Trigger: GCCCCAGTCTCCAGTTCTCCAGTGTTCACAGGTGAG...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCTTAACATTTTAATTTaGGGTGGGGGTGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PARLTQMESRARVGPWVPLNILI*GGGGRK
Trigger: TTTTCTTCCACCCCCACCCCAAATTAAAATGTTAAG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CCA 90 bp TCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGATACCTGAAGAGAGAATaGAAACACTGCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPILMPWGPARLTQMESRYLKRE*KHCRQD
Trigger: ATCCTGCCTGCAGTGTTTCCATTCTCTCTTCAGGTA...TCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGACAACACTTACGTGCTTaGATTAGTATAATTCACAGC +
Preference number: 4 (lower is better)
Translates to: ARLTQMESRARVGPWVPRQHLRA*ISIIHS
Trigger: GCTGTGAATTATACTAATCCAAGCACGTAAGTGTTG...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGGCTGGAGTACTACAGTaGCTATTTATAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: LPHPNALGTSQADPNGIQAGVLQ*LFIGAI
Trigger: GATTGCACCTATAAATAGCCACTGTAGTACTCCAGC...CTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp AAAGCAGCTGCCTTCTCAGCCACAGAAGTGAGCTATTACATCACCCAGTTTTGTTGTTGCTGCACTTCCTaGGTGAGGGAGTTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KAAAFSATEVSYYITQFCCCCTS*VRELGP
Trigger: GGGCCCTAACTCCCTCACCCAGGAAGTGCAGCAACA...ACAAAACTGGGTGATGTAATAGCTCACTTCTGTGGCTGAGAAGGCAGCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CAA 72 bp ATAGGTGCAATCCCACTACTGATCAGCACAGGAATTTaGACCTGCTCCATTTCCGACCTGGGCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: IGAIPLLISTGI*TCSISDLGQFT
Trigger: GGTGAACTGGCCCAGGTCGGAAATGGAGCAGGTCAAAATTCCTGTGCTGATCAGTAGTGGGATTGCACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAGAGTACTTCTCCGCCTaGGCCTCAAGAGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: PCKGTYPTVSAQVKEQQIEYFSA*ASRDLR
Trigger: CCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTC...TATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323144.12
CDS-3UTR TCA 90 bp ATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCCTAAGCAAATACTCTTaGGAGCACTTGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IHVRPPGQNAGNARHWRLLSKYS*EHLLFS
Trigger: AGAAAACAACAAGTGCTCTCAAGAGTATTTGCTTAG...GAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGACGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR TCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGATGGTCTTGATCTCTTaGCCTTGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTMVLIS*PCDPPA
Trigger: GGCAGGTGGATCACAAGGTCAAGAGATCAAGACCAT...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGGGTGGAAGGTCTACCCGCTCTTTaGGACTTGCTCCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GTYPTVSAQVKEQQIRVEGLPAL*DLLLLQ
Trigger: CTGCAACAGGAGCAAGTCTCAAAGAGCGGGTAGACC...TTCCACCCTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTAATTAGCTGGGTGTGGTaGCAGGCGCCTGTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLISWVW*QAPVIS
Trigger: TGAGATCACAGGCGCCTGCCACCACACCCAGCTAAT...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTAGCTGGGCATGGTGGTaGGTATCTGTAATCACAGCT +
Preference number: 4 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRSWAWW*VSVITA
Trigger: AGCTGTGATTACAGATACCCACCACCATGCCCAGCT...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCACCTATCAGATAACTTaGGGTTACTACATCTTATTC +
Preference number: 4 (lower is better)
Translates to: TSQADPNGIQSESGALGSTYQIT*GYYILF
Trigger: GAATAAGATGTAGTAACCCCAAGTTATCTGATAGGT...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTGTAACCCCAGCACTTTaGAAGGCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSVTPAL*KAEAGR
Trigger: TCTGCCCGCCTCGGCCTTCCAAAGTGCTGGGGTTAC...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGTTTAATGGGCATCATTaGGCCCTGCCCATCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMFNGHH*ALPISH
Trigger: GTGACTGATGGGCAGGGCTCAATGATGCCCATTAAA...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR TCA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAATTTAATGGGCATCATTaGGCCCTGCCCATCAGTCAC +
Preference number: 4 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQFNGHH*ALPISH
Trigger: GTGACTGATGGGCAGGGCTCAATGATGCCCATTAAA...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR GCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGGGCACCCACCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTGTHPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGGTGGGTGCC...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTGTGATCACAGCTTGCTaGAGCCTCAGACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSVITAC*SLRLLG
Trigger: GCCCAGGAGTCTGAGGCTGCAGCAAGCTGTGATCAC...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp TCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGACTTAACATTTTAATTTaGGGTGGGGGTGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPILMPWGPARLTQMESRLNILI*GGGGRK
Trigger: TTTTCTTCCACCCCCACCCCAAATTAAAATGTTAAG...TCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
3UTR CAA 72 bp GTCCACTTTGGTACCCCAGTTTGTTGGTCTCTATCCTaGGCTCACACTAGTCATACCGCAAGGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VHFGTPVCWSLS*AHTSHTARKTG
Trigger: TCCTGTTTTCCTTGCGGTATGACTAGTGTGAGCCAAGGATAGAGACCAACAAACTGGGGTACCAAAGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp AAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGTTTAATGGGCATCATTaGGCCCTGCCCATCAGTCAC +
Preference number: 4 (lower is better)
Translates to: KHPCKGTYPTVSAQVKEQFNGHH*ALPISH
Trigger: GTGACTGATGGGCAGGGCTCAATGATGCCCATTAAA...CTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR TCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGCATGTTTTGAGTGCTTaGCTGCCACATGTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTHVLSA*LPHVAN
Trigger: ATTAGCCACATGTGGCAGTCAAGCACTCAAAACATG...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGTCAACTCAGAGAAGGTaGTGGCAACACAGACCCATA +
Preference number: 4 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMSTQRR*WQHRPI
Trigger: TATGGGTCTGTGTTGCCATCACCTTCTCTGAGTTGA...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTAAGAACACTTAGACTCTaGCAGCTCAGCTCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLRTLRL*QLSSFL
Trigger: GAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCT...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGCAGTCACACAGATCATaGAGCGTTAGCTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMQSHRS*SVSFSS
Trigger: TGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTG...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR GCA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCCTGAGGTGGGAGAACTaGTTGAACCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSLRWEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAGTTCTCCCACCTCAG...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTAGAGTACTTCTCCGCCTaGGCCTCAAGAGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLEYFSA*ASRDLR
Trigger: CCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTC...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp ACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCACACAGCCGGCCTCGTATATAGTTCAGCCTaGGATGTCAGTGTTAACCTA +
Preference number: 4 (lower is better)
Translates to: TLASQKQLSKLSTHTAGLVYSSA*DVSVNL
Trigger: TAGGTTAACACTGACATCTCAGGCTGAACTATATAC...GAGGCCGGCTGTGTGAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR TCA 90 bp TACCCATTACATGCCTTCTTCCATGAGTTTTTCCAATTCATTCCCACTAGGATCCTGGTCTCGAACTCATaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: YPLHAFFHEFFQFIPTRILVSNS*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCATGAGTTCGAGACCAG...GATCCTAGTGGGAATGAATTGGAAAAACTCATGGAAGAAGGCATGTAATGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGTTGCTGCAGAGCTATTaGACAGAACTAGCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMLLQSY*TELACD
Trigger: GTCACAAGCTAGTTCTGTTCAATAGCTCTGCAGCAA...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCAGAATGCAGGAAATaGCAGACACTGGCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYPECRK*QTLASQ
Trigger: TTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGG...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCATGGAGTCTCTCTGTTaGCCAGGCTGGAATGCAGTG +
Preference number: 4 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSMESLC*PGWNAV
Trigger: CACTGCATTCCAGCCTGGGCAACAGAGAGACTCCAT...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTATTTCACCCAGATACCTaGCAGATTGTCAGCCGTATC +
Preference number: 4 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLFHPDT*QIVSRI
Trigger: GATACGGCTGACAATCTGGCAGGTATCTGGGTGAAA...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp AAAGCAGCTGCCTTCTCAGCCACAGAAGTGAGCTATTACATCACCCAGTTTTGTCTGTTGCAGAGAAGCTaGAGACTGATAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KAAAFSATEVSYYITQFCLLQRS*RLIKQL
Trigger: CAGCTGCTTTATCAGTCTGCAGCTTCTCTGCAACAG...ACAAAACTGGGTGATGTAATAGCTCACTTCTGTGGCTGAGAAGGCAGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTAGTTGGTCTCTATCCTTaGCTCACACTAGTCATACCG +
Preference number: 4 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLVGLYP*LTLVIP
Trigger: CGGTATGACTAGTGTGAGCCAAGGATAGAGACCAAC...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGTCCCTCAAAGCAGCCTaGTCAATTATAGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMSLKAA*SIIEVM
Trigger: CATGACCTCTATAATTGACCAGGCTGCTTTGAGGGA...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
3UTR CAA 72 bp AGCTATTACATCACCCAGTTTTGTAGGGCCTTTGGCTaGCCTACTGAAGTTGTAGGTGTTGCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SYYITQFCRAFG*PTEVVGVAALP
Trigger: AGGAAGTGCAGCAACACCTACAACTTCAGTAGGCAAGCCAAAGGCCCTACAAAACTGGGTGATGTAATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR TCA 90 bp AGCCTCATTTTAAGACACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCCTGGCCAACATGCTaGAACCCCGTCCGTACTAAA +
Preference number: 4 (lower is better)
Translates to: SLILRHNLFPTLSKSTFRAWPTC*NPVRTK
Trigger: TTTAGTACGGACGGGGTTTCAGCATGTTGGCCAGGC...TCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGTGTCTTAAAATGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGACAAATGTTTTACTCTaGTGCTTGACTTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTTNVLL*CLTSPQ
Trigger: TTGGGGTGAAGTCAAGCATCAGAGTAAAACATTTGT...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAGTTGTAAGCAAACCTTaGGATTGCTGCAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQVVSKP*DCCRAI
Trigger: AATAGCTCTGCAGCAATCTCAAGGTTTGCTTACAAC...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR TCA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAACAATACCCTCTTaGAATGGCTCACCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQITIPS*NGSPEF
Trigger: AAACTCCGGTGAGCCATTTCAAGAGGGTATTGTTAT...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCTCTTCTGCCTGCTTCTaGTCAGCTTCAGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSSSACF*SASACS
Trigger: AGAGCAAGCTGAAGCTGAGCAGAAGCAGGCAGAAGA...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCCATGGAGTTGGATAGTATTCAACCAACACCATGTGAAAGGAAGAGATTTGGTGCAAGTTTAACATGTTaGCTGGGCGCAGTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PMELDSIQPTPCERKRFGASLTC*LGAVAQ
Trigger: TTGAGCCACTGCGCCCAGCCAACATGTTAAACTTGC...ACCAAATCTCTTCCTTTCACATGGTGTTGGTTGAATACTATCCAACTCCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GTATTTTTACTAGAAGTCAGATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAGTATATAGTTCAGCCTaGGATGTCAGTGTTAACCTA +
Preference number: 4 (lower is better)
Translates to: VFLLEVRFTSGLQARMQEVYSSA*DVSVNL
Trigger: TAGGTTAACACTGACATCTCAGGCTGAACTATATAC...TTCCTGCATTCTGGCCTGGAGGCCGGACGTGAATCTGACTTCTAGTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR TCA 90 bp CTTGTTGTTCTCCACTCCCAGGAGGTCACCATACTGATGCCAAATTTAGTGAGGGTACAGAATGTGTATTaGGAGTCACTTCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LVVLHSQEVTILMPNLVRVQNVY*ESLQWL
Trigger: AAGCCATTGAAGTGACTCTCAATACACATTCTGTAC...CCTCACTAAATTTGGCATCAGTATGGTGACCTCCTGGGAGTGGAGAACAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCCTTTGGCTTGCCTACTaGAGTTGTAGGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFIVKNIHAREHILQSVPLWLAY*SCRCCC
Trigger: GCAGCAACACCTACAACTTCAGTAGGCAAGCCAAAG...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp CTAGTAGATTCTAAGCAACTTGAGAGTAGGAATGGTGCCTCCATCTTTATTTCTAGCTTCAGCTTGCTCTaGCCGATCCAGAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: LVDSKQLESRNGASIFISSFSLL*PIQSIL
Trigger: GAGAATGCTCTGGATCGGGCAGAGCAAGCTGAAGCT...AGAAATAAAGATGGAGGCACCATTCCTACTCTCAAGTTGCTTAGAATCTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp AGGGACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATGGCATCATTGAGCCCTaGCCATCAGTCACACAGATC +
Preference number: 4 (lower is better)
Translates to: RDRNFTMVNFTMLLGNQHGIIEP*PSVTQI
Trigger: GATCTGTGTGACTGATGGGCAGGGCTCAATGATGCC...ATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR GCA 90 bp TCTTCACCCATAATCTCTTCTAAAGGGACAGAAACTTCACAATGGTCAACTTCAGGCATCATTGAGCCCTaGCCATCAGTCACACAGATC +
Preference number: 4 (lower is better)
Translates to: SSPIISSKGTETSQWSTSGIIEP*PSVTQI
Trigger: GATCTGTGTGACTGATGGGCAGGGCTCAATGATGCC...TGAAGTTGACCATTGTGAAGTTTCTGTCCCTTTAGAAGAGATTATGGGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR GCA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCATCAACGGAAAATTGTaGAGTCTCTGGGATAAACAG +
Preference number: 4 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLINGKL*SLWDKQ
Trigger: CTGTTTATCCCAGAGACTGCACAATTTTCCGTTGAT...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp GTATTTTTACTAGAAGTCAGATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAGTTAGCATTGGTCCATaGCTATCAACGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: VFLLEVRFTSGLQARMQEVSIGP*LSTENC
Trigger: ACAATTTTCCGTTGATAGGCATGGACCAATGCTAAC...TTCCTGCATTCTGGCCTGGAGGCCGGACGTGAATCTGACTTCTAGTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp CTTGTTGTTCTCCACTCCCAGGAGGTCACCATACTGATGCCAAATTTAGTGAGGGTCAAAGCCAACTTCTaGCCAGGATCTGAATATTTA +
Preference number: 4 (lower is better)
Translates to: LVVLHSQEVTILMPNLVRVKANF*PGSEYL
Trigger: TAAATATTCAGATCCTGGGCAGAAGTTGGCTTTGAC...CCTCACTAAATTTGGCATCAGTATGGTGACCTCCTGGGAGTGGAGAACAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTATTTTACTCTGATGCTTaGCTTCACCCCAATACTAGT +
Preference number: 4 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLFYSDA*LHPNTS
Trigger: ACTAGTATTGGGGTGAAGTCAAGCATCAGAGTAAAA...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTTCCTGGGCCTGCCGATaGAGCAGTTACAACAACTTG +
Preference number: 4 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSSWACR*SSYNNL
Trigger: CAAGTTGTTGTAACTGCTTCATCGGCAGGCCCAGGA...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp AAAATGTATATAGTTCAGCCTGAGATGTCAGTGTTAACCTATAAAAGGCCCAGCCCAGAATGCAGGAAATaGCAGACACTGGCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KMYIVQPEMSVLTYKRPSPECRK*QTLASQ
Trigger: TTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGG...GCTGGGCCTTTTATAGGTTAACACTGACATCTCAGGCTGAACTATATACATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCCAATCAGCTTTTTGTTaGGGTCCAGGTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PFIVKNIHAREHILQSVPQSAFC*GPGQWC
Trigger: ACACCACTGACCTGGACCCCAACAAAAAGCTGATTG...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATAATAGGTCTGAGGGTTaGAGGGACTGGTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYNRSEG*RDWFFI
Trigger: AATAAAGAACCAGTCCCTCCAACCCTCAGACCTATT...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp TACCCATTACATGCCTTCTTCCATGAGTTTTTCCAATTCATTCCCACTAGGATCACTTTATTGCCAGGCTaGTCTCGAACTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: YPLHAFFHEFFQFIPTRITLLPG*SRTPGF
Trigger: GAATCCAGGAGTTCGAGACCAGCCTGGCAATAAAGT...GATCCTAGTGGGAATGAATTGGAAAAACTCATGGAAGAAGGCATGTAATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTCCAGGAAGTGTCAGCTaGATAAATGAATCTGAACCT +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSPGSVS*INESEP
Trigger: AGGTTCAGATTCATTTATTCAGCTGACACTTCCTGG...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp AGGGACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTCAGCCACAGAAGTaGGCTATTACATCACCCAGT +
Preference number: 4 (lower is better)
Translates to: RDRNFTMVNFTMLLGNQHSQPQK*AITSPS
Trigger: ACTGGGTGATGTAATAGCTCACTTCTGTGGCTGAGA...ATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR GCA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTAGAACACTTAGACTCTaGCAGCTCAGCTCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSRTLRL*QLSSFL
Trigger: GAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCT...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323144.12
CDS-3UTR GCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTTTTACTTCTTTCTTCTaGCTGCTTCTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSFTSFF*LLLLSF
Trigger: GAAGCTGAGCAGAAGCAGGCAGAAGAAAGAAGTAAA...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp AGGGACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATCAGTCACACAGATCATaGAGCGTTAGCTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RDRNFTMVNFTMLLGNQHQSHRS*SVSFSS
Trigger: TGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTG...ATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR GCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATATCAACGGAAAATTGTaGAGTCTCTGGGATAAACAG +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYINGKL*SLWDKQ
Trigger: CTGTTTATCCCAGAGACTGCACAATTTTCCGTTGAT...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATGTTAGCATTGGTCCATaGCTATCAACGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYVSIGP*LSTENC
Trigger: ACAATTTTCCGTTGATAGGCATGGACCAATGCTAAC...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCCTGTTTCAGTACAGTTaGTTAAAACCACGCATTTAT +
Preference number: 4 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLLFQYS*LKPRIY
Trigger: ATAAATGCGTGGTTTTAACCAACTGTACTGAAACAG...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTTACCTGTACCCCATATaGATTCCCAACTCTCTTATG +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSYLYPI*IPNSLM
Trigger: CATAAGAGAGTTGGGAATCCATATGGGGTACAGGTA...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp AAGCTGCCAAACAGAATAGGTCAGTTGTACCTATCAGATAACTTGGGGTTACTATCAACCAACACCATGTaGAAGGAAGAGATTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KLPNRIGQLYLSDNLGLLSTNTM*KEEIWL
Trigger: CAACCAAATCTCTTCCTTTCACATGGTGTTGGTTGA...TAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp GAAAACAAAGCCAAGAATACTACTGAAACAAGTAGTTGTAAGCAAACCTTGAGACCGCTCTTTGAGACTTaGTCCTGTTGCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ENKAKNTTETSSCKQTLRPLFET*SCCREA
Trigger: AGCTTCTCTGCAACAGGAGCAAGTCTCAAAGAGCGG...TCTCAAGGTTTGCTTACAACTACTTGTTTCAGTAGTATTCTTGGCTTTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CCA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTTCTAATTTACCTCCATaGCATAAACTACCTGTACCC +
Preference number: 4 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSSNLPP*HKLPVP
Trigger: GGGTACAGGTAGTTTATGCCATGGAGGTAAATTAGA...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp AGCCTCATTTTAAGACACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGACCAACCCCATGGAGTTaGATAGTATTCAACCAACAC +
Preference number: 4 (lower is better)
Translates to: SLILRHNLFPTLSKSTFRPTPWS*IVFNQH
Trigger: GTGTTGGTTGAATACTATCCAACTCCATGGGGTTGG...TCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGTGTCTTAAAATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCTCCAATCAGTTCCATTTGGTTCCTCCTCTTACATAACGTTTTCCTCATTGTTCACAAACCAACCCCATaGAGTTGGATAGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: PPISSIWFLLLHNVFLIVHKPTP*SWIVFN
Trigger: GTTGAATACTATCCAACTCCATGGGGTTGGTTTGTG...AACAATGAGGAAAACGTTATGTAAGAGGAGGAACCAAATGGAACTGATTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp CTAGTAGATTCTAAGCAACTTGAGAGTAGGAATGGTGCCTCCATCTTTATTTCTGGTCAGAAAGACAAATaGAGCTGTTCTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LVDSKQLESRNGASIFISGQKDK*SCSLTL
Trigger: CAAAGTGAGAGAACAGCTGCATTTGTCTTTCTGACC...AGAAATAAAGATGGAGGCACCATTCCTACTCTCAAGTTGCTTAGAATCTACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp TCAACGGAAAATTGTGCAGTCTCTGGGATAAACAGCTCGACTTTGTCAAGGGAACTGTTTCAGTACAGTTaGTTAAAACCACGCATTTAT +
Preference number: 4 (lower is better)
Translates to: STENCAVSGINSSTLSRELFQYS*LKPRIY
Trigger: ATAAATGCGTGGTTTTAACCAACTGTACTGAAACAG...TTCCCTTGACAAAGTCGAGCTGTTTATCCCAGAGACTGCACAATTTTCCGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CCA 90 bp CCTCCAATCAGTTCCATTTGGTTCCTCCTCTTACATAACGTTTTCCTCATTGTTAGTGTTTTTAACAGATaGAATCTTGCTGTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPISSIWFLLLHNVFLIVSVFNR*NLAVLP
Trigger: GGGCAACACAGCAAGATTCCATCTGTTAAAAACACT...AACAATGAGGAAAACGTTATGTAAGAGGAGGAACCAAATGGAACTGATTGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCTCCAATCAGTTCCATTTGGTTCCTCCTCTTACATAACGTTTTCCTCATTGTTCCTTTAGAGCTATTGTaGCCTTCTCATCTCTATCAA +
Preference number: 4 (lower is better)
Translates to: PPISSIWFLLLHNVFLIVPLELL*PSHLYQ
Trigger: TTGATAGAGATGAGAAGGCCACAATAGCTCTAAAGG...AACAATGAGGAAAACGTTATGTAAGAGGAGGAACCAAATGGAACTGATTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR TCA 90 bp AGCCTCATTTTAAGACACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGGTAACATAAATGGCTaGAATGTGAGAAACACCATG +
Preference number: 4 (lower is better)
Translates to: SLILRHNLFPTLSKSTFRGNING*NVRNTM
Trigger: CATGGTGTTTCTCACATTTCAGCCATTTATGTTACC...TCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGTGTCTTAAAATGAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp AAAATGTATATAGTTCAGCCTGAGATGTCAGTGTTAACCTATAAAAGGCCCAGCAAGAATAAATCCTGTTaGTACCACCCACAAAGATGC +
Preference number: 4 (lower is better)
Translates to: KMYIVQPEMSVLTYKRPSKNKSC*YHPQRC
Trigger: GCATCTTTGTGGGTGGTAGCAACAGGATTTATTCTT...GCTGGGCCTTTTATAGGTTAACACTGACATCTCAGGCTGAACTATATACATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR GCA 90 bp GTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCACTTTTCTAGGTTTTaGCCACATAACAATACCCTC +
Preference number: 4 (lower is better)
Translates to: VLLLLKTSMQGNISYSQCHFSRF*PHNNTL
Trigger: GAGGGTATTGTTATGTGGGCAAAACCTAGAAAAGTG...GCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CCA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCACAGAAACTTCACAATaGTCAACTTCACAATGCTGT +
Preference number: 4 (lower is better)
Translates to: PFIVKNIHAREHILQSVPTETSQ*STSQCC
Trigger: ACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGT...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
3UTR CAA 72 bp AGGTCTAAGATAAAGCTGCCAAACAGAATAGGTCAGTaGTACCTATCAGATAACTTGGGGTTACTACATCTT +
Preference number: 4 (lower is better)
Translates to: RSKIKLPNRIGQ*YLSDNLGLLHL
Trigger: AAGATGTAGTAACCCCAAGTTATCTGATAGGTACAACTGACCTATTCTGTTTGGCAGCTTTATCTTAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR GCA 90 bp CTAGTAGATTCTAAGCAACTTGAGAGTAGGAATGGTGCCTCCATCTTTATTTCTGTGAGAGCATTTTATTaGCTGACTAAATCACAGAAC +
Preference number: 4 (lower is better)
Translates to: LVDSKQLESRNGASIFISVRAFY*LTKSQN
Trigger: GTTCTGTGATTTAGTCAGGCAATAAAATGCTCTCAC...AGAAATAAAGATGGAGGCACCATTCCTACTCTCAAGTTGCTTAGAATCTACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp GTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCACAGAAACTTCACAATaGTCAACTTCACAATGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLLLKTSMQGNISYSQCTETSQ*STSQCC
Trigger: ACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGT...GCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CCA 90 bp CCTCCAATCAGTTCCATTTGGTTCCTCCTCTTACATAACGTTTTCCTCATTGTTAAATACATACCCTGCTaGGAAACTAAAGTACTAAGT +
Preference number: 4 (lower is better)
Translates to: PPISSIWFLLLHNVFLIVKYIPC*ETKVLS
Trigger: ACTTAGTACTTTAGTTTCCCAGCAGGGTATGTATTT...AACAATGAGGAAAACGTTATGTAAGAGGAGGAACCAAATGGAACTGATTGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CCA 90 bp CCTCCAATCAGTTCCATTTGGTTCCTCCTCTTACATAACGTTTTCCTCATTGTTACGCACCACCATGTTTaGCTAAGTTTTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: PPISSIWFLLLHNVFLIVTHHHV*LSFYIL
Trigger: CAAAATATAAAAACTTAGCCAAACATGGTGGTGCGT...AACAATGAGGAAAACGTTATGTAAGAGGAGGAACCAAATGGAACTGATTGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGCTGCTCAGCTTCAGCTaGCTCTGCCCGATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: WGPARLTQMESRARVGPWLLSFS*LCPIQS
Trigger: GCTCTGGATCGGGCAGAGCAAGCTGAAGCTGAGCAG...CCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGTGTAACCCCAGCACTTaGGAAGGCCGAGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALCNPST*EGRGGQ
Trigger: CTGCCCGCCTCGGCCTTCCAAAGTGCTGGGGTTACA...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGAGCGAGAGTGGGGCCTaGGGTTCCCCGAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALSESGA*GSPRSK
Trigger: TTTACTCCTCGGGGAACCCAAGGCCCCACTCTCGCT...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CAA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCATGAGCAGTGGCTGTaGGTAGGCTCACCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PARLTQMESRARVGPWVPHEQWL*VGSPVN
Trigger: GTTCACAGGTGAGCCTACCAACAGCCACTGCTCATG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CAA 90 bp CCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCAGTGTGATCACAGCTaGCTGCAGCCTCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: PARLTQMESRARVGPWVPQCDHS*LQPQTP
Trigger: AGGAGTCTGAGGCTGCAGCAAGCTGTGATCACACTG...GGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCCATGAGCAGTGGCTGTaGGTAGGCTCACCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: CSPILMPWGPARLTQMESHEQWL*VGSPVN
Trigger: GTTCACAGGTGAGCCTACCAACAGCCACTGCTCATG...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CAA 90 bp GTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGGCAGGAGAATCTCTaGAACCAGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: VRPPGQNAGNARHWRLKSRQENL*NQEAEV
Trigger: AACCTCCGCCTCCTGGTTCAAGAGATTCTCCTGCCT...GCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCAGGTTTTCACCACGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: TSQADPNGIQSESGALGSQVFTT*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACGTGGTGAAAACCTG...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS GCA 90 bp CAGGAGTCCTCTCCTCTTCTAGGGCTTTTTACCAGAACTCCAGGCTaGGTTCTCCAAGGGTCTTCCCTCACAGGGATCCAGCCGGATTCC +
Preference number: 5 (lower is better)
Translates to: QESSPLLGLFTRTPG*VLQGSSLTGIQPDS
Trigger: GGAATCCGGCTGGATCCCTGTGAGGGAAGACCCTTGGAGAACGCAGCCTGGAGTTCTGGTAAAAAGCCCTAGAAGAGGAGAGGACTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS-3UTR CAA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAAGAGACTTGAGGTTGTaGGTGACATTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ARLTQMESRARVGPWVPRRDLRL*VTFFSS
Trigger: GGAGCTGAAGAATGTCACCAACAACCTCAAGTCTCT...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGAATCAGCACAGGAATTTaGACCTGCTCCATTTCCGAC +
Preference number: 5 (lower is better)
Translates to: ARLTQMESRARVGPWVPRISTGI*TCSISD
Trigger: GTCGGAAATGGAGCAGGTCAAAATTCCTGTGCTGAT...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGATGTTGGTCTCTATCCTaGGCTCACACTAGTCATACC +
Preference number: 5 (lower is better)
Translates to: ARLTQMESRARVGPWVPRCWSLS*AHTSHT
Trigger: GGTATGACTAGTGTGAGCCAAGGATAGAGACCAACA...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCTGGTACCCCAGTTTGTaGGTCTCTATCCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: TSQADPNGIQSESGALGSWYPSL*VSILGS
Trigger: TGAGCCAAGGATAGAGACCAACAAACTGGGGTACCA...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGCTTTGGTACCCCAGTTaGTTGGTCTCTATCCTTGGC +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALLWYPS*LVSILG
Trigger: GCCAAGGATAGAGACCAACAAACTGGGGTACCAAAG...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCCCGATACATAAGTTGCTTTTaGCTCCCCCATCCTAATGCC +
Preference number: 5 (lower is better)
Translates to: ARLTQMESRARVGPWVPRYISCF*LPHPNA
Trigger: GGCATTAGGATGGGGGAGCAAAAAGCAACTTATGTA...TCGGGGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368530.7
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGGACAGCAACAGCTTaGTCAATGACACAAATGCAG +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALGTATA*SMTQMQ
Trigger: CTGCATTTGTGTCATTGACAAAGCTGTTGCTGTCCC...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS TCA 90 bp TCGGCTCAGGTAGGTAGGTTCTCTCTCCCGTCTCCTGGAAGTCAATaGATGGAACTGTCGGAGTGGAAGGGATGGGCAAGATGGCACAAA +
Preference number: 5 (lower is better)
Translates to: SAQVGRFSLPSPGSQ*MELSEWKGWARWHK
Trigger: TTTGTGCCATCTTGCCCATCCCTTCCACTCCGACAGTTCCATTCATTGACTTCCAGGAGACGGGAGAGAGAACCTACCTACCTGAGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368527.7
CDS GCA 90 bp CAGGAACAAGTCATAACTGCTACCTGGGGTGGAGGTGGGAACAAATaGCCAACCCAAACAGTCCCCCAAATCACCCAAAGGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: QEQVITATWGGGGNK*PTQTVPQITQRKET
Trigger: GGTCTCCTTCCTTTGGGTGATTTGGGGGACTGTTTGGGTTGGGCATTTGTTCCCACCTCCACCCCAGGTAGCAGTTATGACTTGTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CCA 90 bp TTATATATGGAATGCGTGTCTCCAGTCTTTCATCAAGGGCAGGGCTaGGCCCAGGCCCCAAAGCCTGTCACTTTCACAAACCAGCCCCTA +
Preference number: 5 (lower is better)
Translates to: LYMECVSPVFHQGQG*AQAPKPVTFTNQPL
Trigger: TAGGGGCTGGTTTGTGAAAGTGACAGGCTTTGGGGCCTGGGCCCAGCCCTGCCCTTGATGAAAGACTGGAGACACGCATTCCATATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CCA 90 bp CATGGTAAGGAGGTAGGAAGAGGACACGCCTCACTGGATTATATATaGAATGCGTGTCTCCAGTCTTTCATCAAGGGCAGGGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: HGKEVGRGHASLDYI*NACLQSFIKGRAGP
Trigger: GGGCCCAGCCCTGCCCTTGATGAAAGACTGGAGACACGCATTCCATATATAATCCAGTGAGGCGTGTCCTCTTCCTACCTCCTTACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS-3UTR CAA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCTCAAGAGACTTGAGGTaGTTGGTGACATTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CSPILMPWGPARLTQMESSRDLR*LVTFFS
Trigger: GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGA...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGATTTCCAGTTAGCATaGGTCCATGCCTATCAACGG +
Preference number: 5 (lower is better)
Translates to: SGLQARMQEMPDTGVSKADFQLA*VHAYQR
Trigger: CCGTTGATAGGCATGGACCAATGCTAACTGGAAATC...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp CTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGTCACGCCCTAGAATTTaGTTTTCACCCAGATACCTG +
Preference number: 5 (lower is better)
Translates to: LPHPNALGTSQADPNGIQSRPRI*FSPRYL
Trigger: CAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGA...CTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TGCTCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCACTTCATTGTCCACTTaGGTACCCCAGTTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: CSPILMPWGPARLTQMESTSLST*VPQFVG
Trigger: ACCAACAAACTGGGGTACCAAAGTGGACAATGAAGT...GGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGTTACATAGTACTTCATaGTCCACTTTGGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALLHSTS*STLVPQ
Trigger: CTGGGGTACCAAAGTGGACAATGAAGTACTATGTAA...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS GCA 90 bp AACCTATTAGTGGCCCCTCTGCTCCACAGGCTGCCCCTGCAACTCTaGCAAGAGAGTGTACCAAAGGAGCATACATCAGAGTTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: NLLVAPLLHRLPLQL*QESVPKEHTSEFSK
Trigger: CTTTGAGAACTCTGATGTATGCTCCTTTGGTACACTCTCTTGGCAGAGTTGCAGGGGCAGCCTGTGGAGCAGAGGGGCCACTAATAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS CCA 90 bp TGTCCAGAACAGAAGAATAACTTGTCTCCCTGGCAGGCTCCATCGTaGGCTCCAGAAGAGAAGACTTATAGTTCCCCACCTTGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: CPEQKNNLSPWQAPS*APEEKTYSSPPCLA
Trigger: TGCCAGGCAAGGTGGGGAACTATAAGTCTTCTCTTCTGGAGCCCACGATGGAGCCTGCCAGGGAGACAAGTTATTCTTCTGTTCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS-3UTR CAA 90 bp ATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCCCTATCAACGGAAAATaGTGCAGTCTCTGGGATAAA +
Preference number: 5 (lower is better)
Translates to: IHVRPPGQNAGNARHWRLPINGK*CSLWDK
Trigger: TTTATCCCAGAGACTGCACAATTTTCCGTTGATAGG...GAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGACGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS CCA 90 bp CACTTGAGAGAAATCCACTACCAGGAACAAGTCATAACTGCTACCTaGGGTGGAGGTGGGAACAAATGCCCAACCCAAACAGTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: HLREIHYQEQVITAT*GGGGNKCPTQTVPQ
Trigger: TTGGGGGACTGTTTGGGTTGGGCATTTGTTCCCACCTCCACCCCAGGTAGCAGTTATGACTTGTTCCTGGTAGTGGATTTCTCTCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS-3UTR CAA 90 bp TCCGGCCTCCAGGCCAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAATAAACAGCTCGACTTaGTCAAGGGAACCGTGTATT +
Preference number: 5 (lower is better)
Translates to: SGLQARMQEMPDTGVSKAINSST*SREPCI
Trigger: AATACACGGTTCCCTTGACAAAGTCGAGCTGTTTAT...TGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTGGCCTGGAGGCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp TCCCCCATCCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGACTTAGCAATAATGTATaGGGTTCACTGGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SPILMPWGPARLTQMESRLSNNV*GSLGVL
Trigger: CAGAACACCCAGTGAACCCAATACATTATTGCTAAG...TCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGGATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp TTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGTCTCTGCTGTGTAAATaGGAATGCGAATTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LGTSQADPNGIQSESGALSLLCK*ECEFLF
Trigger: AAAAAGGAATTCGCATTCCAATTTACACAGCAGAGA...CAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp CCTAATGCCTTGGGGACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGTGAAAGGAAGAGATTaGGTTGGGGCTAAGATAAAG +
Preference number: 5 (lower is better)
Translates to: PNALGTSQADPNGIQSESVKGRD*VGAKIK
Trigger: CTTTATCTTAGCCCCAACCAAATCTCTTCCTTTCAC...ACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTCCCCAAGGCATTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp ACCAGCCAGGCTGACCCAAATGGAATCCAGAGCGAGAGTGGGGCCTTGGGTTCCAGCTGTTCTCTCACTTaGAACTTAGTTTCTAACTCT +
Preference number: 5 (lower is better)
Translates to: TSQADPNGIQSESGALGSSCSLT*NLVSNS
Trigger: AGAGTTAGAAACTAAGTTCAAAGTGAGAGAACAGCT...GGAACCCAAGGCCCCACTCTCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS GCA 90 bp TGCCCCCATCTGTCTGCTAGAAAGCCTGTTAGGGCCCTTGATTATTaGTTTTCAGCACAGCAGTATCAGCCTAAGGAGCACATGACTCCA +
Preference number: 5 (lower is better)
Translates to: CPHLSARKPVRALDY*FSAQQYQPKEHMTP
Trigger: TGGAGTCATGTGCTCCTTAGGCTGATACTGCTGTGCTGAAAAGCAATAATCAAGGGCCCTAACAGGCTTTCTAGCAGACAGATGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS-3UTR CAA 90 bp CAGCTTTTTGTTGGGGTCCAGGTCAGTGGTGTGAGCAGTAAGCTCAGTTTAATGAGGTCTACCCGCTCTTaGAGACTTGCTCCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: QLFVGVQVSGVSSKLSLMRSTRS*RLAPVA
Trigger: TGCAACAGGAGCAAGTCTCAAAGAGCGGGTAGACCT...CATTAAACTGAGCTTACTGCTCACACCACTGACCTGGACCCCAACAAAAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS GCA 90 bp GCTTGCTCCTGGCCACAACCTTCCCTCTCCTGTTTCTTGTTCTTATaGATATCTCTGAGGGTACTTTCTGACTTGGGAAAGATCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ACSWPQPSLSCFLFL*ISLRVLSDLGKISS
Trigger: GCTGCTGATCTTTCCCAAGTCAGAAAGTACCCTCAGAGATATGCATAAGAACAAGAAACAGGAGAGGGAAGGTTGTGGCCAGGAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466010.1
CDS CCA 90 bp AAAGTCACCCTTGGATGTCCAGAACAGAAGAATAACTTGTCTCCCTaGCAGGCTCCATCGTGGGCTCCAGAAGAGAAGACTTATAGTTCC +
Preference number: 5 (lower is better)
Translates to: KVTLGCPEQKNNLSP*QAPSWAPEEKTYSS
Trigger: GGAACTATAAGTCTTCTCTTCTGGAGCCCACGATGGAGCCTGCCAGGGAGACAAGTTATTCTTCTGTTCTGGACATCCAAGGGTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS-3UTR CAA 90 bp TACCCATTACATGCCTTCTTCCATGAGTTTTTCCAATTCATTCCCACTAGGATCCTGCTCAGCTTCAGCTaGCTCTGCCCGATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: YPLHAFFHEFFQFIPTRILLSFS*LCPIQS
Trigger: GCTCTGGATCGGGCAGAGCAAGCTGAAGCTGAGCAG...GATCCTAGTGGGAATGAATTGGAAAAACTCATGGAAGAAGGCATGTAATGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAACAATCAGCTTTTTGTaGGGGTCCAGGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQTISFL*GSRSVV
Trigger: CACCACTGACCTGGACCCCAACAAAAAGCTGATTGT...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CAA 90 bp CAGAATGCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATAGGCAGGAGAATCTCTaGAACCAGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QNAGNARHWRLKSSFQSYRQENL*NQEAEV
Trigger: AACCTCCGCCTCCTGGTTCAAGAGATTCTCCTGCCT...ATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp CATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAAAGACAATCAGCTTTTaGTTGGGGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: HPCKGTYPTVSAQVKEQQKTISF*LGSRSV
Trigger: CACTGACCTGGACCCCAACAAAAAGCTGATTGTCTT...TTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CAA 90 bp GTATTTTTACTAGAAGTCAGATTCACGTCCGGCCTCCAGGCCAGAATGCAGGAAGATTTCCAGTTAGCATaGGTCCATGCCTATCAACGG +
Preference number: 5 (lower is better)
Translates to: VFLLEVRFTSGLQARMQEDFQLA*VHAYQR
Trigger: CCGTTGATAGGCATGGACCAATGCTAACTGGAAATC...TTCCTGCATTCTGGCCTGGAGGCCGGACGTGAATCTGACTTCTAGTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp CTTGTTGTTCTCCACTCCCAGGAGGTCACCATACTGATGCCAAATTTAGTGAGGAGACAGGAGAATCGCTaGAACTCAAGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LVVLHSQEVTILMPNLVRRQENR*NSRSRG
Trigger: ACCTCTGCTTCTTGAGTTCAAGCGATTCTCCTGTCT...CCTCACTAAATTTGGCATCAGTATGGTGACCTCCTGGGAGTGGAGAACAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTACAGGTTCTCACTTTATaGCCAGGCTGGTCTCGAACT +
Preference number: 5 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLQVLTL*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCAATAAAGTGAGAACCTG...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS TCA 90 bp GGCCACAACCTTCCCTCTCCTGTTTCTTGTTCTTATGCATATCTCTaGGGGTACTTTCTGACTTGGGAAAGATCAGCAGCCTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GHNLPSPVSCSYAYL*GYFLTWERSAAFFS
Trigger: AGAGAAGAAGGCTGCTGATCTTTCCCAAGTCAGAAAGTACCCTCAGAGATATGCATAAGAACAAGAAACAGGAGAGGGAAGGTTGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466010.1
CDS GCA 90 bp ATCTGTCTTGATTGCTCATTAGGTCTCAGAGCTGATTCTGTCTGTTaGCCCCATCTGTCTGCTAGAAAGCCTGTTAGGGCCCTTGATTAT +
Preference number: 5 (lower is better)
Translates to: ICLDCSLGLRADSVC*PHLSARKPVRALDY
Trigger: ATAATCAAGGGCCCTAACAGGCTTTCTAGCAGACAGATGGGGGCAACAGACAGAATCAGCTCTGAGACCTAATGAGCAATCAAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS-3UTR CAA 90 bp AAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGAGAGACTTGAGGTTGTaGGTGACATTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KHPCKGTYPTVSAQVKEQRDLRL*VTFFSS
Trigger: GGAGCTGAAGAATGTCACCAACAACCTCAAGTCTCT...CTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323144.12
CDS-3UTR CAA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PFIVKNIHAREHILQSVPAVSLK*AVETLF
Trigger: GAAGAGCGTCTCTACAGCCAACTTGAGCGAAACCGC...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323144.12
ENST00000368531.6
CDS-3UTR CAA 90 bp ACCTGTACCCCATATGGATTCCCAACTCTCTTATGTCAACCTCTCTGCCTCACGAAAAACCAGTCATCCTaGTCTTTCCTCCTCACATCA +
Preference number: 5 (lower is better)
Translates to: TCTPYGFPTLLCQPLCLTKNQSS*SFLLTS
Trigger: TGATGTGAGGAGGAAAGACAAGGATGACTGGTTTTT...CGTGAGGCAGAGAGGTTGACATAAGAGAGTTGGGAATCCATATGGGGTACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp AAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGAGTTTTGTAGGGCCTTaGGCTTGCCTACTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KHPCKGTYPTVSAQVKEQSFVGP*ACLLKL
Trigger: CAACTTCAGTAGGCAAGCCAAAGGCCCTACAAAACT...CTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS TCA 90 bp TGGTCCAAGAGTAAGAGCAAGGCCTGGCTCTGGACAATAGGTCCTTaGAATTCAGAAATCTATGTCTTTAGAGCCATGAGATCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: WSKSKSKAWLWTIGP*NSEIYVFRAMRSSG
Trigger: ACCTGAGGATCTCATGGCTCTAAAGACATAGATTTCTGAATTTCAAGGACCTATTGTCCAGAGCCAGGCCTTGCTCTTACTCTTGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469717.5
ENST00000513769.5
CDS-3UTR CAA 90 bp ATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGAAGACAATCAGCTTTTaGTTGGGGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: MQGNISYSQCPSERAANKKTISF*LGSRSV
Trigger: CACTGACCTGGACCCCAACAAAAAGCTGATTGTCTT...CTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CAA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCATAAACAGCTCGACTTaGTCAAGGGAACCGTGTATT +
Preference number: 5 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLINSST*SREPCI
Trigger: AATACACGGTTCCCTTGACAAAGTCGAGCTGTTTAT...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp GCAGGAAATGCCAGACACTGGCGTCTCAAAAGCAGCTTTCAAAGTTATCCACTCCCTATCAACGGAAAATaGTGCAGTCTCTGGGATAAA +
Preference number: 5 (lower is better)
Translates to: AGNARHWRLKSSFQSYPLPINGK*CSLWDK
Trigger: TTTATCCCAGAGACTGCACAATTTTCCGTTGATAGG...GAGTGGATAACTTTGAAAGCTGCTTTTGAGACGCCAGTGTCTGGCATTTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368533.8
ENST00000611659.4
CDS-3UTR CAA 90 bp CTCCTCACATCAAGTGGCCAGGCCTTTCACAATGCCTGTCTTTATTTAGTGCTATACAGGCAAGTGCCATaGCACCCAGCTAAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: LLTSSGQAFHNACLYLVLYRQVP*HPAKRK
Trigger: TTTTCTTTTAGCTGGGTGCAATGGCACTTGCCTGTA...TAGCACTAAATAAAGACAGGCATTGTGAAAGGCCTGGCCACTTGATGTGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCTTC +
Preference number: 5 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSAVSLK*AVETLF
Trigger: GAAGAGCGTCTCTACAGCCAACTTGAGCGAAACCGC...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323144.12
ENST00000368531.6
CDS-3UTR CAA 90 bp CCCATGGAGTTGGATAGTATTCAACCAACACCATGTGAAAGGAAGAGATTTGGTCAGATACCTGCCAGATaGTCAGCCGTATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PMELDSIQPTPCERKRFGQIPAR*SAVSSF
Trigger: GAAAGAAGATACGGCTGACAATCTGGCAGGTATCTG...ACCAAATCTCTTCCTTTCACATGGTGTTGGTTGAATACTATCCAACTCCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp CCTCACGCCCTAGAATTTTGTTTTCACCCAGATACCTGCCAGATTGTCAGCCGTAACAGAATAGGTCAGTaGTACCTATCAGATAACTTG +
Preference number: 5 (lower is better)
Translates to: PHALEFCFHPDTCQIVSRNRIGQ*YLSDNL
Trigger: CAAGTTATCTGATAGGTACAACTGACCTATTCTGTT...ACGGCTGACAATCTGGCAGGTATCTGGGTGAAAACAAAATTCTAGGGCGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp AGGGACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCATA +
Preference number: 5 (lower is better)
Translates to: RDRNFTMVNFTMLLGNQHAVSLK*AVETLI
Trigger: TATGAGCGTCTCTACAGCCAACTTGAGCGAAACCGC...ATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CAA 90 bp ATGCAAGGGAACATATCCTACAGTCAGTGCCCAAGTGAAAGAGCAGCAAATAAGCATAACAATACCCTCTaGAAATGGCTCACCGGAGTT +
Preference number: 5 (lower is better)
Translates to: MQGNISYSQCPSERAANKHNNTL*KWLTGV
Trigger: AACTCCGGTGAGCCATTTCAAGAGGGTATTGTTATG...CTTATTTGCTGCTCTTTCACTTGGGCACTGACTGTAGGATATGTTCCCTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CAA 90 bp CCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCCCTGTAGGGCCTTTGGCTaGCCTACTGAAGTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: PFIVKNIHAREHILQSVPCRAFG*PTEVVG
Trigger: ACCTACAACTTCAGTAGGCAAGCCAAAGGCCCTACA...GGGCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CAA 90 bp TCTTCACCCATAATCTCTTCTAAAGGGACAGAAACTTCACAATGGTCAACTTCAACAATCAGCTTTTTGTaGGGGTCCAGGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSPIISSKGTETSQWSTSTISFL*GSRSVV
Trigger: CACCACTGACCTGGACCCCAACAAAAAGCTGATTGT...TGAAGTTGACCATTGTGAAGTTTCTGTCCCTTTAGAAGAGATTATGGGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000368531.6
ENST00000651731.1
CDS-3UTR CAA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCTACATAAGTTGCTTTTaGCTCCCCCATCCTAATGCC +
Preference number: 5 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSYISCF*LPHPNA
Trigger: GGCATTAGGATGGGGGAGCAAAAAGCAACTTATGTA...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GCAAGGAAAACAGGAGATACCACAGATCAGAGCTATAACACCTTACTTTTCTCCACAACCCAACTCTGCTaGTCAAAAATCCACTTTTGG +
Preference number: 5 (lower is better)
Translates to: ARKTGDTTDQSYNTLLFSTTQLC*SKIHFW
Trigger: CCAAAAGTGGATTTTTGACAAGCAGAGTTGGGTTGT...GGAGAAAAGTAAGGTGTTATAGCTCTGATCTGTGGTATCTCCTGTTTTCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp ACAACCTGTTCCCTACTCTGTCTAAATCTACCTTTAGAGCTATTGTGGCCTTCTCTACCTTTAGAGCTATaGTGGCCTTCTCATCTCTAT +
Preference number: 5 (lower is better)
Translates to: TTCSLLCLNLPLELLWPSLPLEL*WPSHLY
Trigger: ATAGAGATGAGAAGGCCACAATAGCTCTAAAGGTAG...AGAAGGCCACAATAGCTCTAAAGGTAGATTTAGACAGAGTAGGGAACAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp CTAGTAGATTCTAAGCAACTTGAGAGTAGGAATGGTGCCTCCATCTTTATTTCTACCAACCCCATGGAGTaGGATAGTATTCAACCAACA +
Preference number: 5 (lower is better)
Translates to: LVDSKQLESRNGASIFISTNPME*DSIQPT
Trigger: TGTTGGTTGAATACTATCCAACTCCATGGGGTTGGT...AGAAATAAAGATGGAGGCACCATTCCTACTCTCAAGTTGCTTAGAATCTACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651641.1
CDS-3UTR CAA 90 bp GACAGAAACTTCACAATGGTCAACTTCACAATGCTGTTAGGAAATCAACATTCTTCAAGAGACTTGAGGTaGTTGGTGACATTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: DRNFTMVNFTMLLGNQHSSRDLR*LVTFFS
Trigger: GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGA...AGAATGTTGATTTCCTAACAGCATTGTGAAGTTGACCATTGTGAAGTTTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323144.12
CDS-3UTR CAA 90 bp ACTTGTCAAGTCAGTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCAAGACAATCAGCTTTTaGTTGGGGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TCQVSPFIVKNIHAREHIKTISF*LGSRSV
Trigger: CACTGACCTGGACCCCAACAAAAAGCTGATTGTCTT...GATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGACTGACTTGACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS-3UTR CAA 90 bp GTCCTTTTATTGTTAAAAACATCCATGCAAGGGAACATATCCTACAGTCAGTGCAGTTGTAAGCAAACCTaGAGATTGCTGCAGAGCTAT +
Preference number: 5 (lower is better)
Translates to: VLLLLKTSMQGNISYSQCSCKQT*RLLQSY
Trigger: ATAGCTCTGCAGCAATCTCAAGGTTTGCTTACAACT...GCACTGACTGTAGGATATGTTCCCTTGCATGGATGTTTTTAACAATAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651731.1
CDS TCA 90 bp AGAACTGTGGAAAGTAGCCATGAAATGACATACATCTTGCCCTTCTaGAATCATGGCTTCCATTTAAACCCACAGACTAAAGGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: RTVESSHEMTYILPF*NHGFHLNPQTKGLR
Trigger: TCTTAAACCTTTAGTCTGTGGGTTTAAATGGAAGCCATGATTTCAGAAGGGCAAGATGTATGTCATTTCATGGCTACTTTCCACAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS TCA 90 bp CACTCCCATCCAGGTACCCAATTCCTAGCAGTGATAACACTTAATTaGACAAAAATAGCAAAGGGAGAGAGTATATATCCATATTCAGAC +
Preference number: 5 (lower is better)
Translates to: HSHPGTQFLAVITLN*TKIAKGESIYPYSD
Trigger: GTCTGAATATGGATATATACTCTCTCCCTTTGCTATTTTTGTTCAATTAAGTGTTATCACTGCTAGGAATTGGGTACCTGGATGGGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS-3UTR CAA 90 bp TCTTCACCCATAATCTCTTCTAAAGGGACAGAAACTTCACAATGGTCAACTTCAATATTTATCTTCTTTTaGAGAGTACTTCTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: SSPIISSKGTETSQWSTSIFIFF*RVLLRL
Trigger: CAGGCGGAGAAGTACTCTCAAAAAGAAGATAAATAT...TGAAGTTGACCATTGTGAAGTTTCTGTCCCTTTAGAAGAGATTATGGGTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323144.12
CDS CCA 90 bp ACATTGGTCAATGTTCAGATATGGTTATTCCACAACTTCATTTATTaGATAAATACCCGACAACTTGAGTGGCAAAAAGAACTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: TLVNVQIWLFHNFIY*INTRQLEWQKELWK
Trigger: TTTCCACAGTTCTTTTTGCCACTCAAGTTGTCGGGTATTTATCCAATAAATGAAGTTGTGGAATAACCATATCTGAACATTGACCAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS GCA 72 bp TCGGCGTTGCAGCCTCCTCTCACCCTTACTTCCGCCTaGTACGCCCTGAAATACCGGAACTCACCAACCCGC +
Preference number: 6 (lower is better)
Translates to: SALQPPLTLTSA*YALKYRNSPTR
Trigger: GCGGGTTGGTGAGTTCCGGTATTTCAGGGCGTAGCAGGCGGAAGTAAGGGTGAGAGGAGGCTGCAACGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611659.4
CDS TCA 72 bp GGAGAATCACTTGAACTCAGTAGGTGGAGGTTGCGGTaGGCCGAGATCGAGCCATTGCACTCCAGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: GESLELSRWRLR*AEIEPLHSSLS
Trigger: TGAGAGGCTGGAGTGCAATGGCTCGATCTCGGCTCACCGCAACCTCCACCTACTGAGTTCAAGTGATTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651873.1
CDS CAA 72 bp TTCCAGCTACTTGGGAGGCTCAGGCAGGAGAATCACTaGAACTCAGTAGGTGGAGGTTGCGGTGAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: FQLLGRLRQENH*NSVGGGCGEPR
Trigger: TCTCGGCTCACCGCAACCTCCACCTACTGAGTTCAAGTGATTCTCCTGCCTGAGCCTCCCAAGTAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651873.1
CDS GCA 72 bp GGCTGGCCTCCAACTCCTGGGTTCAAGCAACCTTCCTaGCTTGGCATACTAAGTAGCTGGGACTACAGGTTT +
Preference number: 6 (lower is better)
Translates to: GWPPTPGFKQPS*LGILSSWDYRF
Trigger: AAACCTGTAGTCCCAGCTACTTAGTATGCCAAGGCAGGAAGGTTGCTTGAACCCAGGAGTTGGAGGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368545.7
ENST00000469717.5
CDS GCA 72 bp TCTCCTCTTCTAGGGCTTTTTACCAGAACTCCAGGCTaGGTTCTCCAAGGGTCTTCCCTCACAGGGATCCAG +
Preference number: 6 (lower is better)
Translates to: SPLLGLFTRTPG*VLQGSSLTGIQ
Trigger: CTGGATCCCTGTGAGGGAAGACCCTTGGAGAACGCAGCCTGGAGTTCTGGTAAAAAGCCCTAGAAGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS GCA 72 bp AGGAAGAGGACACGCCTCACTGGATTATATATGGAATaGGTGTCTCCAGTCTTTCATCAAGGGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RKRTRLTGLYME*VSPVFHQGQGW
Trigger: CCAGCCCTGCCCTTGATGAAAGACTGGAGACACGCATTCCATATATAATCCAGTGAGGCGTGTCCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CCA 72 bp CAGAAGAATAACTTGTCTCCCTGGCAGGCTCCATCGTaGGCTCCAGAAGAGAAGACTTATAGTTCCCCACCT +
Preference number: 6 (lower is better)
Translates to: QKNNLSPWQAPS*APEEKTYSSPP
Trigger: AGGTGGGGAACTATAAGTCTTCTCTTCTGGAGCCCACGATGGAGCCTGCCAGGGAGACAAGTTATTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS CCA 72 bp CTTGGATGTCCAGAACAGAAGAATAACTTGTCTCCCTaGCAGGCTCCATCGTGGGCTCCAGAAGAGAAGACT +
Preference number: 6 (lower is better)
Translates to: LGCPEQKNNLSP*QAPSWAPEEKT
Trigger: AGTCTTCTCTTCTGGAGCCCACGATGGAGCCTGCCAGGGAGACAAGTTATTCTTCTGTTCTGGACATCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS CAA 72 bp CTTTTTCTTGATGGCCTCCATCATGAGCAGTGGCTGTaGGTAGGCTCACCTGTGAACACTGGAGAACTGGAG +
Preference number: 6 (lower is better)
Translates to: LFLDGLHHEQWL*VGSPVNTGELE
Trigger: CTCCAGTTCTCCAGTGTTCACAGGTGAGCCTACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368530.7
ENST00000515609.1
ENST00000651641.1
ENST00000651644.1
CDS CAA 90 bp CTGTCTGTTGCCCCCATCTGTCTGCTAGAAAGCCTGTTAGGGCCCTaGATTATTGCTTTTCAGCACAGCAGTATCAGCCTAAGGAGCACA +
Preference number: 6 (lower is better)
Translates to: LSVAPICLLESLLGP*IIAFQHSSISLRST
Trigger: TGTGCTCCTTAGGCTGATACTGCTGTGCTGAAAAGCAATAATCAAGGGCCCTAACAGGCTTTCTAGCAGACAGATGGGGGCAACAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CAA 90 bp ATCCTCCTTAAAGTCACCCTTGGATGTCCAGAACAGAAGAATAACTaGTCTCCCTGGCAGGCTCCATCGTGGGCTCCAGAAGAGAAGACT +
Preference number: 6 (lower is better)
Translates to: ILLKVTLGCPEQKNN*SPWQAPSWAPEEKT
Trigger: AGTCTTCTCTTCTGGAGCCCACGATGGAGCCTGCCAGGGAGACAAGTTATTCTTCTGTTCTGGACATCCAAGGGTGACTTTAAGGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS GCA 72 bp CTTGAGAGAAATCCACTACCAGGAACAAGTCATAACTaGTACCTGGGGTGGAGGTGGGAACAAATGCCCAAC +
Preference number: 6 (lower is better)
Translates to: LERNPLPGTSHN*YLGWRWEQMPN
Trigger: GTTGGGCATTTGTTCCCACCTCCACCCCAGGTAGCAGTTATGACTTGTTCCTGGTAGTGGATTTCTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CCA 72 bp GAAATCCACTACCAGGAACAAGTCATAACTGCTACCTaGGGTGGAGGTGGGAACAAATGCCCAACCCAAACA +
Preference number: 6 (lower is better)
Translates to: EIHYQEQVITAT*GGGGNKCPTQT
Trigger: TGTTTGGGTTGGGCATTTGTTCCCACCTCCACCCCAGGTAGCAGTTATGACTTGTTCCTGGTAGTGGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CAA 72 bp GCCCCCATCTGTCTGCTAGAAAGCCTGTTAGGGCCCTaGATTATTGCTTTTCAGCACAGCAGTATCAGCCTA +
Preference number: 6 (lower is better)
Translates to: APICLLESLLGP*IIAFQHSSISL
Trigger: TAGGCTGATACTGCTGTGCTGAAAAGCAATAATCAAGGGCCCTAACAGGCTTTCTAGCAGACAGATGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CAA 72 bp CCCCATGTCCTCCAGGCATCCTCCTTAAAGTCACCCTaGGATGTCCAGAACAGAAGAATAACTTGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: PHVLQASSLKSP*DVQNRRITCLP
Trigger: AGGGAGACAAGTTATTCTTCTGTTCTGGACATCCAAGGGTGACTTTAAGGAGGATGCCTGGAGGACATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515609.1
CDS GCA 72 bp CTGTCTGCTAGAAAGCCTGTTAGGGCCCTTGATTATTaGTTTTCAGCACAGCAGTATCAGCCTAAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: LSARKPVRALDY*FSAQQYQPKEH
Trigger: GTGCTCCTTAGGCTGATACTGCTGTGCTGAAAAGCAATAATCAAGGGCCCTAACAGGCTTTCTAGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469717.5
CDS CAA 72 bp CTTCAGCTCATTAGAAAGCAGGCGGTTTCGCTCAAGTaGGCTGTAGAGACGCTCTTCCAGGTCATCAATTGT +
Preference number: 6 (lower is better)
Translates to: LQLIRKQAVSLK*AVETLFQVINC
Trigger: ACAATTGATGACCTGGAAGAGCGTCTCTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323144.12
ENST00000341485.10
ENST00000368531.6
CDS CAA 72 bp GACTCTAGCTTTGAGGAAAGAAACCTTTCTTCTTGCTaGCTCCTGGCCACAACCTTCCCTCTCCTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: DSSFEERNLSSC*LLATTFPLLFL
Trigger: AAGAAACAGGAGAGGGAAGGTTGTGGCCAGGAGCAAGCAAGAAGAAAGGTTTCTTTCCTCAAAGCTAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466010.1
CDS CAA 72 bp TACGTTCCCTTGTCAGGGTGGATGGCAGTTACCAACTaGCAGGGACAGAAAGTATTTAGAAAGCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: YVPLSGWMAVTN*QGQKVFRKLLT
Trigger: TGTCAGGAGCTTTCTAAATACTTTCTGTCCCTGCAAGTTGGTAACTGCCATCCACCCTGACAAGGGAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS CAA 90 bp AGCAAAGAGTACGTTCCCTTGTCAGGGTGGATGGCAGTTACCAACTaGCAGGGACAGAAAGTATTTAGAAAGCTCCTGACATTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: SKEYVPLSGWMAVTN*QGQKVFRKLLTLVN
Trigger: ATTGACCAATGTCAGGAGCTTTCTAAATACTTTCTGTCCCTGCAAGTTGGTAACTGCCATCCACCCTGACAAGGGAACGTACTCTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS TCA 72 bp TTTCTTGTTCTTATGCATATCTCTGAGGGTACTTTCTaGCTTGGGAAAGATCAGCAGCCTTCTTCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: FLVLMHISEGTF*LGKDQQPSSLP
Trigger: TGGCAGAGAAGAAGGCTGCTGATCTTTCCCAAGTCAGAAAGTACCCTCAGAGATATGCATAAGAACAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466010.1
CDS TCA 72 bp AGTAAGAGCAAGGCCTGGCTCTGGACAATAGGTCCTTaGAATTCAGAAATCTATGTCTTTAGAGCCATGAGA +
Preference number: 6 (lower is better)
Translates to: SKSKAWLWTIGP*NSEIYVFRAMR
Trigger: TCTCATGGCTCTAAAGACATAGATTTCTGAATTTCAAGGACCTATTGTCCAGAGCCAGGCCTTGCTCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469717.5
ENST00000513769.5
CDS TCA 72 bp CCACAACTTCATTTATTGGATAAATACCCGACAACTTaGGTGGCAAAAAGAACTGTGGAAAGTAGCCATGAA +
Preference number: 6 (lower is better)
Translates to: PQLHLLDKYPTT*VAKRTVESSHE
Trigger: TTCATGGCTACTTTCCACAGTTCTTTTTGCCACTCAAGTTGTCGGGTATTTATCCAATAAATGAAGTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS CAA 72 bp TTGCAGGGACAGAAAGTATTTAGAAAGCTCCTGACATaGGTCAATGTTCAGATATGGTTATTCCACAACTTC +
Preference number: 6 (lower is better)
Translates to: LQGQKVFRKLLT*VNVQIWLFHNF
Trigger: GAAGTTGTGGAATAACCATATCTGAACATTGACCAATGTCAGGAGCTTTCTAAATACTTTCTGTCCCTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504663.1
CDS CAA 90 bp GTTACCAACTTGCAGGGACAGAAAGTATTTAGAAAGCTCCTGACATaGGTCAATGTTCAGATATGGTTATTCCACAACTTCATTTATTGG +
Preference number: 6 (lower is better)
Translates to: VTNLQGQKVFRKLLT*VNVQIWLFHNFIYW
Trigger: CCAATAAATGAAGTTGTGGAATAACCATATCTGAACATTGACCAATGTCAGGAGCTTTCTAAATACTTTCTGTCCCTGCAAGTTGGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504663.1