RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TPM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140416

Ensembl transcript IDs: ENST00000267996.11, ENST00000288398.10, ENST00000317516.12, ENST00000334895.10, ENST00000357980.9, ENST00000358278.7, ENST00000403994.9, ENST00000404484.9, ENST00000558072.5, ENST00000558264.5, ENST00000558314.5, ENST00000558347.5, ENST00000558400.1, ENST00000558544.5, ENST00000558868.5, ENST00000558910.3, ENST00000559108.1, ENST00000559281.6, ENST00000559397.6, ENST00000559556.5, ENST00000559831.5, ENST00000560131.1, ENST00000560679.1, ENST00000560959.5, ENST00000560970.6, ENST00000560975.5, ENST00000561242.1, ENST00000561266.6, ENST00000561395.5, ENST00000561425.5, ENST00000610733.1, ENST00000644204.1, ENST00000651344.1, ENST00000651577.1, ENST00000651590.1, ENST00000651622.1, ENST00000651704.1

Found 992 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGGTCCCGCTCGTCCTCCGACACCCGC +
Preference number: 1 (lower is better)
Translates to: LAAASSAARRLSSAL*SSSSTRSRSSSDTR
Trigger: GCGGGTGTCGGAGGACGAGCGGGACCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR CCA 90 bp GGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTaGGGAGGTTACAGCTGGTCCCCTAAGTGCAGAGACTGTGGGCCT +
Preference number: 1 (lower is better)
Translates to: GGSFSLCFPAVHLVR*GGYSWSPKCRDCGP
Trigger: AGGCCCACAGTCTCTGCACTTAGGGGACCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp CTGAGACTCTCACAAATCCCAGCTTGGGTCCTTGCATCCTGTAGGTaGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTG +
Preference number: 1 (lower is better)
Translates to: LRLSQIPAWVLASCR*ELLALFPRGSSGQV
Trigger: CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGAGAGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp CCAGCCTCTGAGATCTCCTGGAATCCAGTCAGTCCTGGGCTGGACTaGGATGCCTTTAAAAGGCACCCCAAGGAAAGCCACAGAACCCTA +
Preference number: 1 (lower is better)
Translates to: PASEISWNPVSPGLD*DAFKRHPKESHRTL
Trigger: TAGGGTTCTGTGGCTTTCCTTGGGGTGCCTTTTAAAGGCATCCCAGTCCAGCCCAGGACTGACTGGATTCCAGGAGATCTCAGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp TGGAGTTCCTCACAGCCTCTGCTGAGACTCTCACAAATCCCAGCTTaGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCC +
Preference number: 1 (lower is better)
Translates to: WSSSQPLLRLSQIPA*VLASCRWELLALFP
Trigger: GGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGAGAGTCTCAGCAGAGGCTGTGAGGAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp CCAAGGAAAGCCACAGAACCCTATGAGAGAGCCTCTGGCTACAGGTaGAGAAAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTG +
Preference number: 1 (lower is better)
Translates to: PRKATEPYERASGYR*RKPPQIQSPPISPL
Trigger: CAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTTTCTCCACCTGTAGCCAGAGGCTCTCTCATAGGGTTCTGTGGCTTTCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp TCAGACCAGCCTCTGAGATCTCCTGGAATCCAGTCAGTCCTGGGCTaGACTGGGATGCCTTTAAAAGGCACCCCAAGGAAAGCCACAGAA +
Preference number: 1 (lower is better)
Translates to: SDQPLRSPGIQSVLG*TGMPLKGTPRKATE
Trigger: TTCTGTGGCTTTCCTTGGGGTGCCTTTTAAAGGCATCCCAGTCCAGCCCAGGACTGACTGGATTCCAGGAGATCTCAGAGGCTGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 90 bp AGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCT +
Preference number: 1 (lower is better)
Translates to: RMLRERTRVSWRIDK*RAQRGGTSSSTRES
Trigger: AGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR CCA 90 bp AACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAA +
Preference number: 1 (lower is better)
Translates to: NQGQLENRQMQSSER*DIQLDEGVLGEVKQ
Trigger: TTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR TCA 90 bp CCGCTGTGTCATTTCTTTCATTTAGAGGCCAGGTTCTCTGAACCCTaGCTAGACCCACCACCAAACCCAGAACTTCCCACCCACTGGAAA +
Preference number: 1 (lower is better)
Translates to: PLCHFFHLEARFSEP*LDPPPNPELPTHWK
Trigger: TTTCCAGTGGGTGGGAAGTTCTGGGTTTGGTGGTGGGTCTAGTCAGGGTTCAGAGAACCTGGCCTCTAAATGAAAGAAATGACACAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 90 bp TTGCTTTCCTGCCTCATTTTCTGTGGAGTTCCTCACAGCCTCTGCTaGGACTCTCACAAATCCCAGCTTGGGTCCTTGCATCCTGTAGGT +
Preference number: 1 (lower is better)
Translates to: LLSCLIFCGVPHSLC*DSHKSQLGSLHPVG
Trigger: ACCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGAGAGTCTCAGCAGAGGCTGTGAGGAACTCCACAGAAAATGAGGCAGGAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 90 bp GGCATTCTCTACACAAACCTTGGTGATGACACCTCAAGGGTTTTCTaGCACCAGGGAGGTGAAGTTCACCTCCAGAGTCCAATTTCAGCT +
Preference number: 1 (lower is better)
Translates to: GILYTNLGDDTSRVF*HQGGEVHLQSPISA
Trigger: AGCTGAAATTGGACTCTGGAGGTGAACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGTGTCATCACCAAGGTTTGTGTAGAGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 90 bp ATGCTTGACAACCCTCTCCTCCTCCAAGCCCTAACAAGGAACTTTTaGTTTCCTGCCTCATTTTCTGTGGAGTTCCTCACAGCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: MLDNPLLLQALTRNF*FPASFSVEFLTASA
Trigger: AGCAGAGGCTGTGAGGAACTCCACAGAAAATGAGGCAGGAAAGCAAAAGTTCCTTGTTAGGGCTTGGAGGAGGAGAGGGTTGTCAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 90 bp ACTCTCTACAAAGTGTGGCAGCATCAACCCGGGAAATGGCACATTTaGACCAGGATCGCCCTGACATGGGCTTGCCTTTTTGTATGTGTT +
Preference number: 1 (lower is better)
Translates to: TLYKVWQHQPGKWHI*TRIALTWACLFVCV
Trigger: AACACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR GCA 90 bp ATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTT +
Preference number: 1 (lower is better)
Translates to: IHTDCYPTDCHELHV*QSERNGSLGRAAWL
Trigger: AAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR GCA 90 bp GAGTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAG +
Preference number: 1 (lower is better)
Translates to: EWKSTLIVILQIVMS*TCANQKGMEVSEEQ
Trigger: CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR GCA 90 bp ATTAAGGCTTACACTAATGAGAAAGGAAGCCTCAAAGTGTCTCTGTaGCCCACCATGAAGTGCAGCCATCTAAGTAAAGGTACCGCTGTG +
Preference number: 1 (lower is better)
Translates to: IKAYTNEKGSLKVSL*PTMKCSHLSKGTAV
Trigger: CACAGCGGTACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCACAGAGACACTTTGAGGCTTCCTTTCTCATTAGTGTAAGCCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp GACACTGGCAAGTGCCATAAGCAGCCAACTAGTGACTTAATGTCCTaGGAAGGTCAGTTTCAGGTGAGTTCATTTTCATGCCGATGTCAT +
Preference number: 1 (lower is better)
Translates to: DTGKCHKQPTSDLMS*EGQFQVSSFSCRCH
Trigger: ATGACATCGGCATGAAAATGAACTCACCTGAAACTGACCTTCCCAGGACATTAAGTCACTAGTTGGCTGCTTATGGCACTTGCCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 90 bp TGCAGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTaGATTAAGGCTTACACTAATGAGAAAGGAAGCCTCAAAGTGTCT +
Preference number: 1 (lower is better)
Translates to: CRPKQVSSSQADLKG*IKAYTNEKGSLKVS
Trigger: AGACACTTTGAGGCTTCCTTTCTCATTAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 90 bp AATGAGAAAGGAAGCCTCAAAGTGTCTCTGTGCCCCACCATGAAGTaGAGCCATCTAAGTAAAGGTACCGCTGTGTCATTTCTTTCATTT +
Preference number: 1 (lower is better)
Translates to: NEKGSLKVSLCPTMK*SHLSKGTAVSFLSF
Trigger: AAATGAAAGAAATGACACAGCGGTACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCACAGAGACACTTTGAGGCTTCCTTTCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 90 bp TTCTGCGAGTACTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTGGCCT +
Preference number: 1 (lower is better)
Translates to: FCEYLSSAAINAFKV*SIILNCSSSCRTWP
Trigger: AGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
3UTR TCA 90 bp CGGGAGGCAGGCATCTTCCATTTAGCCATATATAGAGCAGGCATCTaGTCTGCATTATACAAAGTAGGCTCAGAGTCATATATGGTTTTT +
Preference number: 1 (lower is better)
Translates to: REAGIFHLAIYRAGI*SALYKVGSESYMVF
Trigger: AAAAACCATATATGACTCTGAGCCTACTTTGTATAATGCAGATCAGATGCCTGCTCTATATATGGCTAAATGGAAGATGCCTGCCTCCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 90 bp CAACACAAAATTCGAAACAAGACCATCAGGGATACTACTCCTGAATaGCAATCTTCTAAGCTAGGTAGAGCCCACTTCCAGAATAGGATT +
Preference number: 1 (lower is better)
Translates to: QHKIRNKTIRDTTPE*QSSKLGRAHFQNRI
Trigger: AATCCTATTCTGGAAGTGGGCTCTACCTAGCTTAGAAGATTGTCATTCAGGAGTAGTATCCCTGATGGTCTTGTTTCGAATTTTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 90 bp AACGACACATGTCTCAGACCTTATCCCCCTTCATTAATCAACAAATaGCTGTATAGCATTTCTTCACTAACTTCTTCAATATTCCTACGG +
Preference number: 1 (lower is better)
Translates to: NDTCLRPYPPSLINK*LYSISSLTSSIFLR
Trigger: CCGTAGGAATATTGAAGAAGTTAGTGAAGAAATGCTATACAGTCATTTGTTGATTAATGAAGGGGGATAAGGTCTGAGACATGTGTCGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp CCCTCGGGCTCGGGGCGCCGCCGAGTTGGAGTGCAAAGGACCCGAGGTAACTTCCCCCGCACACCCACCTaGCCTGGGACGAGACTCCTG +
Preference number: 2 (lower is better)
Translates to: PSGSGRRRVGVQRTRGNFPRTPT*PGTRLL
Trigger: CAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGG...GAAGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCGAGCCCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR-3UTR CCA 90 bp AGCTCCTCCAGCACCCGGTCCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCGGGGCGCCGCCGAGTTaGAGTGCAAAGGACCCGAGG +
Preference number: 2 (lower is better)
Translates to: SSSSTRSRSSSDTRSNFSGAPPS*SAKDPR
Trigger: CCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCC...GGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGGACCGGGTGCTGGAGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR-3UTR CCA 90 bp CCCTCGGGCTCGGGGCGCCGCCGAGTTGGAGTGCAAAGGACCCGAGGTAACTTCCACACCCACCTGCCCTaGGACGAGACTCCTGCCGAG +
Preference number: 2 (lower is better)
Translates to: PSGSGRRRVGVQRTRGNFHTHLP*DETPAE
Trigger: CTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTG...GAAGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCGAGCCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR-3UTR CCA 90 bp AAGCTACGTCGGCTTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCTTTACCCGAGCTaGAACCGCTCCGCGGCTCAC +
Preference number: 2 (lower is better)
Translates to: KLRRLQPWRRPLRRPGGCPLYPS*NRSAAH
Trigger: GTGAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGG...ACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACGTAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR-3UTR GCA 90 bp CGGGCGGCCGGCACGGACCGGGTGTTAGACACACACAACACACGGGCGTCGGGTGCCGCCGAGTTGGAGTaGAAAGGACCCGAGGTAACT +
Preference number: 2 (lower is better)
Translates to: RAAGTDRVLDTHNTRASGAAELE*KGPEVT
Trigger: AGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGC...ACCCGACGCCCGTGTGTTGTGTGTGTCTAACACCCGGTCCGTGCCGGCCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR CAA 90 bp GGTTACAGCTGGTCCCCTAAGTGCAGAGACTGTGGGCCTCCAACATaGAGAATGGGGGAACCGGGTGTCTGGCAACCTCCAGGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GYSWSPKCRDCGPPT*RMGEPGVWQPPGAA
Trigger: GGCTGCTCCTGGAGGTTGCCAGACACCCGGTTCCCCCATTCTCAATGTTGGAGGCCCACAGTCTCTGCACTTAGGGGACCAGCTGTAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 2 (lower is better)
Translates to: AARVPIRKEWKSRKSSVALSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
3UTR CAA 90 bp ATCCCAGCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTaGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTG +
Preference number: 2 (lower is better)
Translates to: IPAWVLASCRWELLA*FPRGSSGQVGRLQL
Trigger: CAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCCACCTCAGGAAGCTaGCTTCTCCCTTACCGGACT +
Preference number: 2 (lower is better)
Translates to: AWVLASCRWELLALFPRGSTSGS*LLPYRT
Trigger: AGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGA...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGGAGCAGCCAGGAAACTaGTGGACACTGGCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWEQPGN*WTLASA
Trigger: GGCACTTGCCAGTGTCCAGCAGTTTCCTGGCTGCTC...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGTCCTGCTGGAGAATTTaGGGGAGGCAGGCATCTTCC +
Preference number: 2 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWSCWRI*GRQASS
Trigger: GGAAGATGCCTGCCTCCCGCAAATTCTCCAGCAGGA...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 2 (lower is better)
Translates to: ENQGQLENRQMQSSERWDQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR-3UTR CCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACTCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
3UTR-3UTR GCA 90 bp ACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: TNAELREVGHPARRGSLGRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...CCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
3UTR-3UTR GCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTGAGTCCAATTTCAGCTaGTCTATTCTCCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: AWVLASCRWELLALFPRGESNFS*SILPAS
Trigger: AGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTC...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGCTTCCAAAGGGCAGTaGACAAAGAGCTTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: SCRWELLALFPRGSSGQVASKGQ*TKSLGE
Trigger: CTCTCCTAAGCTCTTTGTCCACTGCCCTTTGGAAGC...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGAGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCAGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 2 (lower is better)
Translates to: AARVPIRKEWKSRKSSVASYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCAAGAGGCGGCATCCAATaGTCTGGGCCATGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: STAGIAFPGAHTFLELLPRGGIQ*SGPWQG
Trigger: GCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCT...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAACAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 2 (lower is better)
Translates to: ALRQDAKRENQGQLENRQQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR-3UTR CCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGTGGCATAGCTTTCCCTaGTGCTCACACATTCTTGGA +
Preference number: 2 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWWHSFP*CSHILG
Trigger: TCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCA...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTAGAGGCCAGGTTCTCTaGACCCTGACTAGACCCACC +
Preference number: 2 (lower is better)
Translates to: RPKQVSSSQADLKGWIKARGQVL*TLTRPT
Trigger: GGTGGGTCTAGTCAGGGTTCAGAGAACCTGGCCTCT...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 2 (lower is better)
Translates to: AARVPIRKEWKSRKSSVAHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp ATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATCATTCCACCTCCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: IQLDEGVLGEVKQRNLSFHLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTG...GAATGATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR GCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAAGAAGCTCCCTCCCCTaGTGCTTCCCACACCAGCTG +
Preference number: 2 (lower is better)
Translates to: KPPQIQSPPISPLSCILKRSSLP*CFPHQL
Trigger: CAGCTGGTGTGGGAAGCAGCAGGGGAGGGAGCTTCT...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp ACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 2 (lower is better)
Translates to: TNAELREVGHPARRGSLGRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...CCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR CAA 90 bp TTACTCATTTCTAGACAAGAACCTAAGACGGAGGGGAGGGCATCTTaGACCCAAAGGAGCCATGGCACGGATTCTCACAGAGCAGTCAGG +
Preference number: 2 (lower is better)
Translates to: LLISRQEPKTEGRAS*TQRSHGTDSHRAVR
Trigger: CCTGACTGCTCTGTGAGAATCCGTGCCATGGCTCCTTTGGGTCAAAGATGCCCTCCCCTCCGTCTTAGGTTCTTGTCTAGAAATGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
3UTR-3UTR TCA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCAGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAAEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 2 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGTTTATTACATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: SVCLALRQDAKRENQGQLFITLA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATGTAATAAA...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR GCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGAGCAGGCATCTGATCTaGATTATACAAAGTAGGCTC +
Preference number: 2 (lower is better)
Translates to: SCRWELLALFPRGSSGQVSRHLI*IIQSRL
Trigger: GAGCCTACTTTGTATAATGCAGATCAGATGCCTGCT...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCAACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp AAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: KSSVAYRPLALVNSGMRDLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...ATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGCAAAAGGAAAGAAAGTaGAGAAAACCTGGCATTCTC +
Preference number: 2 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWQKERK*RKPGIL
Trigger: GAGAATGCCAGGTTTTCTTCACTTTCTTTCCTTTTG...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR CAA 90 bp AACTCTCTACAAAGTGTGGCAGCATCAACCCGGGAAATGGCACATTaGAACCAGGATCGCCCTGACATGGGCTTGCCTTTTTGTATGTGT +
Preference number: 2 (lower is better)
Translates to: NSLQSVAASTREMAH*NQDRPDMGLPFCMC
Trigger: ACACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGAGGAAGGCATGGTGGTaGGTTTATTACATTAGCATG +
Preference number: 2 (lower is better)
Translates to: VSWRIDKCRAQRGGTSSSRKAWW*VYYISM
Trigger: CATGCTAATGTAATAAACTCACCACCATGCCTTCCT...CGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR TCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTTGGTTGTCAGAAGGCTaGCAGGTGGGGGCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTWLSEG*QVGAGP
Trigger: TGGCCCCGCCCCCACCTGTCAGCCTTCTGACAACCA...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCTGCCCCACCATGAAGTaGAGCCATCTAAGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSCPTMK*SHLSKG
Trigger: ACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCA...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGACAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTGAACTTCCCACCCACTaGAAACGGCAAAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLELPTH*KRQKER
Trigger: TCTTTCCTTTTGCCGTTTCCAGTGGGTGGGAAGTTC...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGTCCTTGTCTGTAGGTTaGAATCACTTGGGTATTTTT +
Preference number: 2 (lower is better)
Translates to: SCRWELLALFPRGSSGQVSLSVG*NHLGIF
Trigger: AAAAATACCCAAGTGATTCCAACCTACAGACAAGGA...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp CCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCAGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: PHLIVFPTLTFLLTLSLAEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...TGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCACTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGACTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp CTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATATGGAAGTCATAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 2 (lower is better)
Translates to: LDEGVLGEVKQRNLYGSHSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...ATGACTTCCATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561395.5
3UTR-3UTR TCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAACATCCCCAGGGATTCTaGTTTAACTGGCTTTGGGTG +
Preference number: 2 (lower is better)
Translates to: KPPQIQSPPISPLSCILKHPQGF*FNWLWV
Trigger: CACCCAAAGCCAGTTAAATCAGAATCCCTGGGGATG...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACCTCATTCTAGTTCACTaGTCTAGTTCAGCGTTTACA +
Preference number: 2 (lower is better)
Translates to: ENQGQLENRQMQSSERWDLILVH*SSSAFT
Trigger: TGTAAACGCTGAACTAGAGCAGTGAACTAGAATGAG...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR TCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 2 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATT +
Preference number: 2 (lower is better)
Translates to: ENQGQLENRQMQSSERWDESWEK*SKETYI
Trigger: AATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
3UTR-3UTR CCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACTGGGGAGGTTACAGCTaGTCCCCTAAGTGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDWGGYS*SPKCRD
Trigger: GTCTCTGCACTTAGGGGACCAGCTGTAACCTCCCCA...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCAGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 2 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp ATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCACTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: IPTLTKHTVLLNSLQSVALQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...TGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACAGGTTCTCTGAACCCTaGCTAGACCCACCACCAAAC +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDRFSEP*LDPPPN
Trigger: GTTTGGTGGTGGGTCTAGTCAGGGTTCAGAGAACCT...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAACTTCAGCCTCACTTTTaGCTTAGGTGGAAAGACAAC +
Preference number: 2 (lower is better)
Translates to: KPPQIQSPPISPLSCILKLQPHF*LRWKDN
Trigger: GTTGTCTTTCCACCTAAGTCAAAAGTGAGGCTGAAG...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp ATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 2 (lower is better)
Translates to: ILQIVMSCTCANQKGMEVQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...GACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
3UTR-3UTR CCA 90 bp AATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: NGTSSALVRIPTLTKHTVTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...CACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCGCAGATCTTAAGGGGTaGATTAAGGCTTACACTAAT +
Preference number: 2 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSADLKG*IKAYTN
Trigger: ATTAGTGTAAGCCTTAATCCACCCCTTAAGATCTGC...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTATGGTGTTTGCACAATaGATAAATCACCTAACGACA +
Preference number: 2 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLMVFAQ*INHLTT
Trigger: TGTCGTTAGGTGATTTATTCATTGTGCAAACACCAT...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACAGAGCCTTAGCTGTGTaGATCACCCCTGCAACTATG +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDRALAV*ITPATM
Trigger: CATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCT...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp ATCTCAGGCCAGCCTCCCTGGGGCTCACTTTCCATGAAAACAGTCATCCAAATGACACTCTATGGTGTTTaGACAATGAATAAATCACCT +
Preference number: 2 (lower is better)
Translates to: ISGQPPWGSLSMKTVIQMTLYGV*TMNKSP
Trigger: AGGTGATTTATTCATTGTGCAAACACCATAGAGTGT...CATTTGGATGACTGTTTTCATGGAAAGTGAGCCCCAGGGAGGCTGGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp TCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: STPDCVSNINLPVDSIIGTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...GCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAGGTGTGAAAAGAAGTTaGTCCTTTGGCTTGACTTTC +
Preference number: 2 (lower is better)
Translates to: KPPQIQSPPISPLSCILKGVKRS*SFGLTF
Trigger: GAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACC...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGTACATTGTACAATGTTaGACAAAAGACCACAGGGGG +
Preference number: 2 (lower is better)
Translates to: TDCYPTDCHELHVCQSERYIVQC*TKDHRG
Trigger: CCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTA...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 2 (lower is better)
Translates to: WKSTLIVILQIVMSCTCASGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATT +
Preference number: 2 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRESWEK*SKETYI
Trigger: AATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
3UTR-3UTR TCA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCAAGGAAGGCATGGTGGTaGGTTTATTACATTAGCATG +
Preference number: 2 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSRKAWW*VYYISM
Trigger: CATGCTAATGTAATAAACTCACCACCATGCCTTCCT...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
3UTR-3UTR GCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAACAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 2 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp ATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATCATTCAGCTGTATTGGATCATaGCAATTTCCTTATCCTCAG +
Preference number: 2 (lower is better)
Translates to: IQLDEGVLGEVKQRNLSFSCIGS*QFPYPQ
Trigger: CTGAGGATAAGGAAATTGGCATGATCCAATACAGCT...GAATGATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR CCA 90 bp AATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: NGTSSALVRIPTLTKHTVQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...CACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 2 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGAAAGTGAAGAAAACCTaGCATTCTCTACACAAACCT +
Preference number: 2 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKKVKKT*HSLHKP
Trigger: AGGTTTGTGTAGAGAATGCCAGGTTTTCTTCACTTT...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAATGCATAATGATGTTTTaGTCAATGAGGGGCTGCATA +
Preference number: 2 (lower is better)
Translates to: KPPQIQSPPISPLSCILKCIMMF*SMRGCI
Trigger: TATGCAGCCCCTCATTGACCAAAACATCATTATGCA...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CAA 90 bp GAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTGCATTaGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAA +
Preference number: 2 (lower is better)
Translates to: EKQAGKASLSANSLH*HFCRKQLFSTLLVE
Trigger: TTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR TCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: TDCYPTDCHELHVCQSERLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR TCA 90 bp TACTCCAACTCTTACTGCCTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCAGATTCTCAATAACCTaGCACTTTAAGGGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: YSNSYCLTVKSGPLTPKLRFSIT*HFKGSF
Trigger: GAAGGAACCCTTAAAGTGTCAGGTTATTGAGAATCT...GAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAGGCAGTAAGAGTTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
3UTR-3UTR TCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACTGGAATCCAACGGTGTaGAAAGAAGTTGGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDWNPTV*KEVGPL
Trigger: CAAAGGACCAACTTCTTTTCACACCGTTGGATTCCA...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR GCA 90 bp TCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGGGGCTTTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SNSTIRLSKAYLSDNQGLFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...AAGCCCCTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
3UTR-3UTR GCA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
3UTR-3UTR GCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAATATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTACCTCAAGGGTTTTCTaGCACCAGGGAGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTTSRVF*HQGGEV
Trigger: AACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGT...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACATATATCACAGTTACTaGGGAAGAGATTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDIYHSY*GRDWGP
Trigger: TGGCCCCCAATCTCTTCCCCAGTAACTGTGATATAT...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAACTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR GCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: YLSVQTRGPAISRSSAELSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR GCA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CCA 90 bp CTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTACAAGAGTGCAAAGATaGAGATTAGGGAGCAAGGAA +
Preference number: 2 (lower is better)
Translates to: LTVKSGPLTPKLTLYNLCTRVQR*RLGSKE
Trigger: TTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGT...ACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
3UTR-3UTR GCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651622.1
3UTR-3UTR CCA 90 bp CTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTACAAAATTAAAGGCTTaGTTACTCAGCAGAGGGTTC +
Preference number: 2 (lower is better)
Translates to: LTVKSGPLTPKLTLYNLCTKLKA*LLSRGF
Trigger: GAACCCTCTGCTGAGTAACCAAGCCTTTAATTTTGT...ACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558910.3
3UTR-3UTR CCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACCCTAAATGTCGTCTCTaGAGTTCTCATTTACAAAGC +
Preference number: 2 (lower is better)
Translates to: ALKASSLMCGNNKENMLDPKCRL*SSHLQS
Trigger: GCTTTGTAAATGAGAACTCCAGAGACGACATTTAGG...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR TCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTTTTATTACATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLFITLA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATGTAATAAA...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
3UTR-3UTR GCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR GCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR CAA 90 bp TACTGCCTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATaGTACAATCTGTGTTTAATTTCCCATTTATTTGACACAGGTTGT +
Preference number: 2 (lower is better)
Translates to: YCLTVKSGPLTPKLT*YNLCLISHLFDTGC
Trigger: ACAACCTGTGTCAAATAAATGGGAAATTAAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
3UTR-3UTR TCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 2 (lower is better)
Translates to: YLSVQTRGPAISRSSAELGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR TCA 90 bp AAACATCAATCACAAACACAGGATGAGATGATTAGAACTAGGCATGCTTGTAAGCACTGTTATACAAACTaGAGAAGTTACGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: KHQSQTQDEMIRTRHACKHCYTN*RSYEQQ
Trigger: CTGCTGTTCGTAACTTCTTCAGTTTGTATAACAGTG...CTTACAAGCATGCCTAGTTCTAATCATCTCATCCTGTGTTTGTGATTGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
3UTR-3UTR GCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTCTCATTCTAGTTCACTaGTCTAGTTCAGCGTTTACA +
Preference number: 2 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLLILVH*SSSAFT
Trigger: TGTAAACGCTGAACTAGAGCAGTGAACTAGAATGAG...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
3UTR GCA 72 bp CTGGAACCGCTCCGCGGCTCACCCCGCACACCCACCTaGCCTGGGACGAGACTCCTGCCGAGGTCTCAGCGG +
Preference number: 3 (lower is better)
Translates to: LEPLRGSPRTPT*PGTRLLPRSQR
Trigger: CCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGAGCGGTTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR GCA 72 bp GCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGGTCCCGCTCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: ASSAARRLSSAL*SSSSTRSRSSS
Trigger: GGAGGACGAGCGGGACCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR CCA 72 bp CCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGAGCTGGGGGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: PARPPTPAATSP*PRCPPRAGGSG
Trigger: GCCGCTGCCCCCAGCTCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR-3UTR CAA 90 bp CCGGGTGTTAGACACACACAACACACGGGCGTCGGGTTGGCTGGGGCCCCTCGGCGGGGCGCCGCCGAGTaGGAGTGCAAAGGACCCGAG +
Preference number: 3 (lower is better)
Translates to: PGVRHTQHTGVGLAGAPRRGAAE*ECKGPE
Trigger: CTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCG...CCGAGGGGCCCCAGCCAACCCGACGCCCGTGTGTTGTGTGTGTCTAACACCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR CCA 72 bp CCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTaGTCCCCTAAGTGCAGAGACTGTGGGCCTCCAACA +
Preference number: 3 (lower is better)
Translates to: PAVHLVRWGGYS*SPKCRDCGPPT
Trigger: TGTTGGAGGCCCACAGTCTCTGCACTTAGGGGACCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 72 bp GGTCCCCTAAGTGCAGAGACTGTGGGCCTCCAACATTaGGAATGGGGGAACCGGGTGTCTGGCAACCTCCAG +
Preference number: 3 (lower is better)
Translates to: GPLSAETVGLQH*EWGNRVSGNLQ
Trigger: CTGGAGGTTGCCAGACACCCGGTTCCCCCATTCTCAATGTTGGAGGCCCACAGTCTCTGCACTTAGGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTaGGGAGGTTACAGCTGGTCCCCTAAGTGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: FSLCFPAVHLVR*GGYSWSPKCRD
Trigger: GTCTCTGCACTTAGGGGACCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTCGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: AARVPIRKEWKSRKSSVAREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR CCA 72 bp TCACAGCCTCTGCTGAGACTCTCACAAATCCCAGCTTaGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCT +
Preference number: 3 (lower is better)
Translates to: SQPLLRLSQIPA*VLASCRWELLA
Trigger: AGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGAGAGTCTCAGCAGAGGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp GAGATCTCCTGGAATCCAGTCAGTCCTGGGCTGGACTaGGATGCCTTTAAAAGGCACCCCAAGGAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: EISWNPVSPGLD*DAFKRHPKESH
Trigger: GTGGCTTTCCTTGGGGTGCCTTTTAAAGGCATCCCAGTCCAGCCCAGGACTGACTGGATTCCAGGAGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp CAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: QLENRQMQSSER*DIQLDEGVLGE
Trigger: TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
3UTR CCA 72 bp TCACAAATCCCAGCTTGGGTCCTTGCATCCTGTAGGTaGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCT +
Preference number: 3 (lower is better)
Translates to: SQIPAWVLASCR*ELLALFPRGSS
Trigger: AGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 3 (lower is better)
Translates to: AARVPIRKEWKSRKSSVAVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGACCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 3 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 3 (lower is better)
Translates to: LHVCQSERNGSLGRAAWLVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...AAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR TCA 72 bp AAAGTGTGGCAGCATCAACCCGGGAAATGGCACATTTaGACCAGGATCGCCCTGACATGGGCTTGCCTTTTT +
Preference number: 3 (lower is better)
Translates to: KVWQHQPGKWHI*TRIALTWACLF
Trigger: AAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCACACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR TCA 72 bp TGCCTCATTTTCTGTGGAGTTCCTCACAGCCTCTGCTaGGACTCTCACAAATCCCAGCTTGGGTCCTTGCAT +
Preference number: 3 (lower is better)
Translates to: CLIFCGVPHSLC*DSHKSQLGSLH
Trigger: ATGCAAGGACCCAAGCTGGGATTTGTGAGAGTCTCAGCAGAGGCTGTGAGGAACTCCACAGAAAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 72 bp TACACAAACCTTGGTGATGACACCTCAAGGGTTTTCTaGCACCAGGGAGGTGAAGTTCACCTCCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: YTNLGDDTSRVF*HQGGEVHLQSP
Trigger: TGGACTCTGGAGGTGAACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGTGTCATCACCAAGGTTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 72 bp GCAGTGGACAAAGAGCTTAGGAGAGCCTTAGCTGTGTaGATCACCCCTGCAACTATGTGGTGGTTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: AVDKELRRALAV*ITPATMWWLSE
Trigger: TTCTGACAACCACCACATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCTCCTAAGCTCTTTGTCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp GAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTaGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGG +
Preference number: 3 (lower is better)
Translates to: EVKLDGICHYGW*LTSHLVSRRLR
Trigger: CCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
3UTR-3UTR CAA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 3 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
3UTR-3UTR CAA 90 bp AAAATGCACGTGGGGTTTGGTGAAGGTTCACTGACGGTGTGCCGTGGGAACAGGTTAAAAGTCTGGGAGTaGTGCGGTAACACAAACTCA +
Preference number: 3 (lower is better)
Translates to: KMHVGFGEGSLTVCRGNRLKVWE*CGNTNS
Trigger: TGAGTTTGTGTTACCGCACAACTCCCAGACTTTTAA...CCTGTTCCCACGGCACACCGTCAGTGAACCTTCACCAAACCCCACGTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651704.1
3UTR TCA 72 bp CATTTCTTTCATTTAGAGGCCAGGTTCTCTGAACCCTaGCTAGACCCACCACCAAACCCAGAACTTCCCACC +
Preference number: 3 (lower is better)
Translates to: HFFHLEARFSEP*LDPPPNPELPT
Trigger: GGTGGGAAGTTCTGGGTTTGGTGGTGGGTCTAGTCAGGGTTCAGAGAACCTGGCCTCTAAATGAAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 72 bp GGAAGCCTCAAAGTGTCTCTGTGCCCCACCATGAAGTaGAGCCATCTAAGTAAAGGTACCGCTGTGTCATTT +
Preference number: 3 (lower is better)
Translates to: GSLKVSLCPTMK*SHLSKGTAVSF
Trigger: AAATGACACAGCGGTACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCACAGAGACACTTTGAGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp CATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTaGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTT +
Preference number: 3 (lower is better)
Translates to: HEVKLDGICHYG*WLTSHLVSRRL
Trigger: AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
3UTR-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 3 (lower is better)
Translates to: AARVPIRKEWKSRKSSVANVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 3 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 3 (lower is better)
Translates to: KSSVAYRPLALVNSGMRDLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...ATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGAACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 3 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 3 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp ATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCCCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 3 (lower is better)
Translates to: ILQIVMSCTCANQKGMEVPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...GACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCCGGTGTGAAAAGAAGTaGGTCCTTTGGCTTGACTTT +
Preference number: 3 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSRCEKK*VLWLDF
Trigger: AAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCG...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTGCATAATGATGTTTaGGTCAATGAGGGGCTGCAT +
Preference number: 3 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLLHNDV*VNEGLH
Trigger: ATGCAGCCCCTCATTGACCAAAACATCATTATGCAG...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 3 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 3 (lower is better)
Translates to: TDCYPTDCHELHVCQSERPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 3 (lower is better)
Translates to: ENQGQLENRQMQSSERWDLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
3UTR-3UTR CAA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCATTCTCTACACAAACCTaGGTGATGACACCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: STAGIAFPGAHTFLELLPFSTQT*VMTPQG
Trigger: CCCTTGAGGTGTCATCACCAAGGTTTGTGTAGAGAA...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTGCGATTTTGCTCAAGTaGCTGGTAGAGTTGATACAG +
Preference number: 3 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLAILLK*LVELIQ
Trigger: CTGTATCAACTCTACCAGCAACTTGAGCAAAATCGC...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651590.1
3UTR TCA 72 bp GGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATGGAAGTCATATCGTTG +
Preference number: 3 (lower is better)
Translates to: GTSSSTRESWEK*SKETYMEVISL
Trigger: CAACGATATGACTTCCATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561395.5
3UTR-3UTR CAA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR-3UTR CAA 90 bp CTGGACACTGGCAAGTGCCATAAGCAGCCAACTAGTGACTTAATGTCCTGGGAAATCCTTGTCTGTAGGTaGGAATCACTTGGGTATTTT +
Preference number: 3 (lower is better)
Translates to: LDTGKCHKQPTSDLMSWEILVCR*ESLGYF
Trigger: AAAATACCCAAGTGATTCCAACCTACAGACAAGGAT...TTCCCAGGACATTAAGTCACTAGTTGGCTGCTTATGGCACTTGCCAGTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR GCA 72 bp GATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCA +
Preference number: 3 (lower is better)
Translates to: DCYPTDCHELHV*QSERNGSLGRA
Trigger: TGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR GCA 72 bp TCCACACTGATTGTTATCCTACAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAAGGAATGGAAGTCTCG +
Preference number: 3 (lower is better)
Translates to: STLIVILQIVMS*TCANQKGMEVS
Trigger: CGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR GCA 72 bp TACACTAATGAGAAAGGAAGCCTCAAAGTGTCTCTGTaGCCCACCATGAAGTGCAGCCATCTAAGTAAAGGT +
Preference number: 3 (lower is better)
Translates to: YTNEKGSLKVSL*PTMKCSHLSKG
Trigger: ACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCACAGAGACACTTTGAGGCTTCCTTTCTCATTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 3 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 3 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCACCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 3 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAATTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 3 (lower is better)
Translates to: ALRQDAKRENQGQLENRQLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
3UTR-3UTR CAA 90 bp TCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGGGGCTTCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SNSTIRLSKAYLSDNQGLLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...AAGCCCCTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
3UTR GCA 72 bp AACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAAAGCAACTGTTTTCAA +
Preference number: 3 (lower is better)
Translates to: NKQARPAFQPIP*ICISAESNCFQ
Trigger: TTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR CCA 72 bp AAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTaGATTAAGGCTTACACTAATGAGAAAGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: KQVSSSQADLKG*IKAYTNEKGSL
Trigger: GAGGCTTCCTTTCTCATTAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CCA 72 bp AAGTGCCATAAGCAGCCAACTAGTGACTTAATGTCCTaGGAAGGTCAGTTTCAGGTGAGTTCATTTTCATGC +
Preference number: 3 (lower is better)
Translates to: KCHKQPTSDLMS*EGQFQVSSFSC
Trigger: GCATGAAAATGAACTCACCTGAAACTGACCTTCCCAGGACATTAAGTCACTAGTTGGCTGCTTATGGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 3 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 3 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 3 (lower is better)
Translates to: WKSTLIVILQIVMSCTCAGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 3 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 3 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCAAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 3 (lower is better)
Translates to: PHLIVFPTLTFLLTLSLANVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...TGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 3 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQNVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 3 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCAGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 3 (lower is better)
Translates to: PHLIVFPTLTFLLTLSLAGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...TGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: YLSVQTRGPAISRSSAELLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
3UTR TCA 72 bp TACTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGG +
Preference number: 3 (lower is better)
Translates to: YLSSAAINAFKV*SIILNCSSSCR
Trigger: CCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
3UTR TCA 72 bp GGCATCTTCCATTTAGCCATATATAGAGCAGGCATCTaGTCTGCATTATACAAAGTAGGCTCAGAGTCATAT +
Preference number: 3 (lower is better)
Translates to: GIFHLAIYRAGI*SALYKVGSESY
Trigger: ATATGACTCTGAGCCTACTTTGTATAATGCAGATCAGATGCCTGCTCTATATATGGCTAAATGGAAGATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR-3UTR CAA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 3 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR-3UTR CAA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTCACACATTCTTGGAATaGTTACCAACTTCCCAAGGA +
Preference number: 3 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTHTFLE*LPTSQG
Trigger: TCCTTGGGAAGTTGGTAACAATTCCAAGAATGTGTG...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR TCA 72 bp AAAAACCAAATACAGCTGCAGCACTGTTATACAAACTaGAGAAGTTACGAACAGCAGACATTTCCAAGGTAC +
Preference number: 3 (lower is better)
Translates to: KNQIQLQHCYTN*RSYEQQTFPRY
Trigger: GTACCTTGGAAATGTCTGCTGTTCGTAACTTCTTCAGTTTGTATAACAGTGCTGCAGCTGTATTTGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651704.1
3UTR GCA 72 bp CTAGGTTTGTGTAAGTACCATACACTCTATGGTGTTTaGACAATGAATAAATCACCTAACGACACATGTCTC +
Preference number: 3 (lower is better)
Translates to: LGLCKYHTLYGV*TMNKSPNDTCL
Trigger: GAGACATGTGTCGTTAGGTGATTTATTCATTGTGCAAACACCATAGAGTGTATGGTACTTACACAAACCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GGGCGGGCGCGGGCGGCCGGCACGGACCGGGTGTTAGACACACACAACACACGGCTGGGACGAGACTCCTaGCGAGGTCTCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRARAAGTDRVLDTHNTRLGRDS*RGLSGL
Trigger: GAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAG...CCGTGTGTTGTGTGTGTCTAACACCCGGTCCGTGCCGGCCGCCCGCGCCCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CCA 90 bp GGCTTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTCACACCCACCTGCCCTaGGACGAGACTCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GFSLGGGLFGGQEAVLRLHTHLP*DETPAE
Trigger: CTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTG...AAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CCA 90 bp TTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTGTGGGGGCGCCGCCGAGTTaGAGTGCAAAGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: FSLGGGLFGGQEAVLRLVGAPPS*SAKDPR
Trigger: CCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCC...CACAAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CCA 90 bp ACCCGAGGTAACTTCCTCTTTACCCGAGCTGGAACCGCTCCGCGGCTCACCCCGACACGGGCGTCGGGTTaGCTGGGGCCCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRGNFLFTRAGTAPRLTPTRASG*LGPLGL
Trigger: GAGCCCGAGGGGCCCCAGCCAACCCGACGCCCGTGT...CGGGGTGAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGGAAGTTACCTCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561425.5
3UTR CAA 72 bp TCCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCGAGCTGGGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRSSSDTRSNFS*AAMSSSSWGQR
Trigger: CCGCTGCCCCCAGCTCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR GCA 90 bp GGACCCGAGGTAACTTCCTCTTTACCCGAGCTGGAACCGCTCCGCGGCTCACCCCCCCGCACACCCACCTaGCCTGGGACGAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GPEVTSSLPELEPLRGSPPRTPT*PGTRLL
Trigger: CAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGG...GGGTGAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGGAAGTTACCTCGGGTCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CCA 90 bp GCTTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTGGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ASALAAASSAARRLSSALAATSP*PRCPPR
Trigger: TCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGC...CAAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR GCA 90 bp GGACCCGAGGTAACTTCCTCTTTACCCGAGCTGGAACCGCTCCGCGGCTCACCCCTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: GPEVTSSLPELEPLRGSPLSSAL*SSSSTR
Trigger: CCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAG...GGGTGAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGGAAGTTACCTCGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR GCA 90 bp CCCTCGGGCTCGGGGCGCCGCCGAGTTGGAGTGCAAAGGACCCGAGGTAACTTCGCCGCCGAGTTGGAGTaGAAAGGACCCGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: PSGSGRRRVGVQRTRGNFAAELE*KGPEVT
Trigger: AGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGC...GAAGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCGAGCCCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR GCA 90 bp AGCTCCTCCAGCACCCGGTCCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCCTCAAGTCCACTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSTRSRSSSDTRSNFSLKSTA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGTGGACTTGAG...GGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGGACCGGGTGCTGGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR GCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGGTGGGAGAGGCCGGCTaGTGCCCTGCGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLVGEAG*CPADPA
Trigger: AGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCAC...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SVCLALRQDAKRENQGQLWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559281.6
CDS-3UTR TCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGTCTCCAGCCCTGTGGTaGCCCCGGAGTGGCCACGCA +
Preference number: 4 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWSPALW*PRSGHA
Trigger: TGCGTGGCCACTCCGGGGTCACCACAGGGCTGGAGA...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGCGTCGGCTTCAGCCTTaGCGGCGGCCTCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMRRLQP*RRPLRR
Trigger: CCGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACG...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267996.11
CDS-3UTR CCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGAGCGGGAGGGCTGCAGTaGGAGAGGCCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGAGGLQ*ERPAAA
Trigger: GGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGC...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR CCA 90 bp CAAAGGACCCGAGGTAACTTCCTCTTTACCCGAGCTGGAACCGCTCCGCGGCTCCCTCTTTACCCGAGCTaGAACCGCTCCGCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QRTRGNFLFTRAGTAPRLPLYPS*NRSAAH
Trigger: GTGAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGG...GAGCCGCGGAGCGGTTCCAGCTCGGGTAAAGAGGAAGTTACCTCGGGTCCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR TCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCAAGAGGCCAGGTTCTCTaGACCCTGACTAGACCCACC +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPRGQVL*TLTRPT
Trigger: GGTGGGTCTAGTCAGGGTTCAGAGAACCTGGCCTCT...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGTGGTTGTCAGAAGGCTaGCAGGTGGGGGCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SCRWELLALFPRGSSGQVWLSEG*QVGAGP
Trigger: TGGCCCCGCCCCCACCTGTCAGCCTTCTGACAACCA...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGCTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMLSSAL*SSSSTR
Trigger: CCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAG...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGACTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCAGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp CAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: QGQLENRQMQSSERWDIQGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...CTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559281.6
CDS-3UTR GCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCACTTCTTTCCCATTTCTaGCCCACCCCATTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPLLSHF*PTPFQR
Trigger: GCGCTGGAATGGGGTGGGGCAGAAATGGGAAAGAAG...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCAGTTCATCTGGTCAGGTaGGGAGGTTACAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPVHLVR*GGYSWS
Trigger: GGACCAGCTGTAACCTCCCCACCTGACCAGATGAAC...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CAA 72 bp TGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTaGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WVLASCRWELLA*FPRGSSGQVGR
Trigger: CCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGCCTCCTCGAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLPPRAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGG...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559281.6
CDS-3UTR GCA 90 bp AATGAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NEHEVKLDGICHYGWWLTWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...AGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CCA 90 bp GCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AELREVGHPARRGSLGRSVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...ACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CCA 90 bp CTTGGTGATGACACCTCAAGGGTTTTCTGCCACCAGGGAGGTGAAGTTCACCTCGGGGAACCGGGTGTCTaGCAACCTCCAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGDDTSRVFCHQGGEVHLGEPGV*QPPGAA
Trigger: GGCTGCTCCTGGAGGTTGCCAGACACCCGGTTCCCC...GAGGTGAACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGTGTCATCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGTTGTCGGCCTCCGCCTaGTCAGCTCGATCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: VSWRIDKCRAQRGGTSSSLSASA*SARSKA
Trigger: CGCCTTGGATCGAGCTGAGCAGGCGGAGGCCGACAA...CGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCCCTCCTCGAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSPPRAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGG...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR GCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAACTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGELLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp AAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KLDGICHYGWWLTSHLVSLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...GCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GACAAAAAGGGTGAACACAAGAGTGCAAAGATGGAGATTAGGGAGCAAGGAAGGGTGGGAGAGGCCGGCTaGTGCCCTGCGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: DKKGEHKSAKMEIREQGRVGEAG*CPADPA
Trigger: AGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCAC...CCTTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGTGTTCACCCTTTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTGTGGGAGAGGCCGGCTaGTGCCCTGCGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFVGEAG*CPADPA
Trigger: AGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCAC...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp CATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: HEVKLDGICHYGWWLTSHGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...GTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GICHYGWWLTSHLVSRRLASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: EHEVKLDGICHYGWWLTSSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...ACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: ELLYNRKHSVCLALRQDASAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...AGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559281.6
ENST00000651590.1
CDS-3UTR GCA 90 bp GACAAAAAGGGTGAACACAAGAGTGCAAAGATGGAGATTAGGGAGCAAGGAAGGTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: DKKGEHKSAKMEIREQGRWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...CCTTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGTGTTCACCCTTTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCGTCCAGGCTGGAGTaGGGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RIDKCRAQRGGTSSSTRESSRLE*GGAISA
Trigger: AGCCGAGATCGCACCACCGCACTCCAGCCTGGACGA...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR CCA 90 bp AAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KCRAQRGGTSSSTRESWEAATSP*PRCPPR
Trigger: TCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGC...CTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR CCA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGGCGGGAGGGCTGCAGTaGGAGAGGCCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQAGGLQ*ERPAAA
Trigger: GGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGC...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334895.10
CDS-3UTR CCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGACTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR CCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTGGGGAGGTTACAGCTaGTCCCCTAAGTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AWVLASCRWELLALFPRGWGGYS*SPKCRD
Trigger: GTCTCTGCACTTAGGGGACCAGCTGTAACCTCCCCA...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTGCCTCTGAGATCTCCTaGAATCCAGTCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AWVLASCRWELLALFPRGASEIS*NPVSPG
Trigger: CCCAGGACTGACTGGATTCCAGGAGATCTCAGAGGC...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CAA 72 bp TGGTCCCCTAAGTGCAGAGACTGTGGGCCTCCAACATaGAGAATGGGGGAACCGGGTGTCTGGCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: WSPKCRDCGPPT*RMGEPGVWQPP
Trigger: TGGAGGTTGCCAGACACCCGGTTCCCCCATTCTCAATGTTGGAGGCCCACAGTCTCTGCACTTAGGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NRQMQSSERWDIQLDEGVGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...GACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR TCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR TCA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR TCA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCACATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GICHYGWWLTSHLVSRRLSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR TCA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGTCGGCTTCAGCCTGGTaGGCTGGGCGCTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQSASAW*AGRSGR
Trigger: CCTCCCGGAGCGCCCAGCTCACCAGGCTGAAGCCGA...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGEASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp AGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACACTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RTRVSWRIDKCRAQRGGTLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...TGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGACAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGTGGGAGAGGCCGGCTaGTGCCCTGCGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSVGEAG*CPADPA
Trigger: AGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCAC...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGATCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559281.6
ENST00000651590.1
CDS-3UTR GCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCATGCCCCACCATGAAGTaGAGCCATCTAAGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPCPTMK*SHLSKG
Trigger: ACCTTTACTTAGATGGCTGCACTTCATGGTGGGGCA...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMAATSP*PRCPPR
Trigger: TCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGC...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: SVCLALRQDAKRENQGQLQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGGCGGGAGGGCTGCAGTaGGAGAGGCCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWAGGLQ*ERPAAA
Trigger: GGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGC...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR CCA 90 bp AGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACACTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RTRVSWRIDKCRAQRGGTLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...TGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559281.6
CDS-3UTR CCA 90 bp TGTGCAGTAGCAGTCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTTCACAAATCCCAGCTTaGGTCCTTGCATCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CAVAVRGGIQCSGPWQGCSQIPA*VLASCR
Trigger: CCTACAGGATGCAAGGACCCAAGCTGGGATTTGTGA...ACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGACTGCTACTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTAGTCCTGGGCTGGACTaGGATGCCTTTAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: AWVLASCRWELLALFPRGSPGLD*DAFKRH
Trigger: GTGCCTTTTAAAGGCATCCCAGTCCAGCCCAGGACT...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp CTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGAGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LALRQDAKRENQGQLENRGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...TCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp GAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTTTGTCGGCCTCCGCCTaGTCAGCTCGATCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: ELLYNRKHSVCLALRQDALSASA*SARSKA
Trigger: CGCCTTGGATCGAGCTGAGCAGGCGGAGGCCGACAA...AGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: AARVPIRKEWKSRKSSVAASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EELLYNRKHSVCLALRQDASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559281.6
ENST00000651590.1
CDS-3UTR GCA 90 bp TGTGCAGTAGCAGTCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGAGTCCAATTTCAGCTaGTCTATTCTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CAVAVRGGIQCSGPWQGCESNFS*SILPAS
Trigger: AGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTC...ACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGACTGCTACTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCTCGGTGTTTCAACTaGTGGCATAGCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AWVLASCRWELLALFPRGSRCFN*WHSFPW
Trigger: CCAGGGAAAGCTATGCCAGCAGTTGAAACACCGAGA...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYAATSP*PRCPPR
Trigger: TCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGC...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CCA 90 bp CTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHVCQSERNGSLGRAAWLVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...AAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp ATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: IDKCRAQRGGTSSSTRESVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...AGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CCA 90 bp AGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQMQSSERWDIQLDEGVLRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...CAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CCA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SVCLALRQDAKRENQGQLRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CCA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGATCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288398.10
CDS-3UTR CCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCATCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: RIDKCRAQRGGTSSSTREQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp CAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: QGQLENRQMQSSERWDIQQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...CTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp AAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: KHSVCLALRQDAKRENQGQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...ACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGCAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp ATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGGCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ICHYGWWLTSHLVSRRLRLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...CCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTGTGGTGACCCCGGAGTaGCCACGCAGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKAVVTPE*PRRQEV
Trigger: CACCTCTTGCCTGCGTGGCCACTCCGGGGTCACCAC...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGCGGTGTTTCAACTGCTaGCATAGCTTTCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCRWELLALFPRGSSGQVRCFNC*HSFPWC
Trigger: GCACCAGGGAAAGCTATGCCAGCAGTTGAAACACCG...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SVCLALRQDAKRENQGQLSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp GCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: AELREVGHPARRGSLGRSHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...ACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR TCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288398.10
CDS-3UTR TCA 90 bp TGTGCAGTAGCAGTCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTCTTCAGCCTCACTTTTaGCTTAGGTGGAAAGACAAC +
Preference number: 4 (lower is better)
Translates to: CAVAVRGGIQCSGPWQGCLQPHF*LRWKDN
Trigger: GTTGTCTTTCCACCTAAGTCAAAAGTGAGGCTGAAG...ACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGACTGCTACTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTGTCGGCCTCCGCCTaGTCAGCTCGATCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVLSASA*SARSKA
Trigger: CGCCTTGGATCGAGCTGAGCAGGCGGAGGCCGACAA...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: GICHYGWWLTSHLVSRRLLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RIDKCRAQRGGTSSSTREASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCACTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAALSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR GCA 90 bp AATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NRQMQSSERWDIQLDEGVQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...GACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR GCA 90 bp AAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATGAGCGCGGAGCCGCCTaGTTCTCCCAGATATGTACT +
Preference number: 4 (lower is better)
Translates to: KSSVAYRPLALVNSGMRDERGAA*FSQICT
Trigger: AGTACATATCTGGGAGAAGCAGGCGGCTCCGCGCTC...ATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358278.7
CDS-3UTR GCA 90 bp AGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACACATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RTRVSWRIDKCRAQRGGTHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...TGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR GCA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR GCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCGTGGGAGAGGCCGGCTaGTGCCCTGCGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCVGEAG*CPADPA
Trigger: AGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCAC...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: NYSSHIEKQAGKASLSANGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: NYSSHIEKQAGKASLSANSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCAAGCAGGCATCTGATCTaGATTATACAAAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: SEAASNALGHGRAVCRCPSRHLI*IIQSRL
Trigger: GAGCCTACTTTGTATAATGCAGATCAGATGCCTGCT...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTGCTCCGGGAGGCCACTaGACTAGGGCTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFAPGGH*TRALAS
Trigger: GGAAGCCAGAGCCCTAGTGCAGTGGCCTCCCGGAGC...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CCA 90 bp GGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GICHYGWWLTSHLVSRRLVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp GAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCTCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EVKLDGICHYGWWLTSHLSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...GAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp AGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACACAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: RTRVSWRIDKCRAQRGGTQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...TGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp CTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: LALRQDAKRENQGQLENRQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...TCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCGCGGGAGGGCTGCAGTaGGAGAGGCCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCAGGLQ*ERPAAA
Trigger: GGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGC...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR CCA 90 bp ATCTCAGGCCAGCCTCCCTGGGGCTCACTTTCCATGAAAACAGTCATCCAAATGTCCCCGCGGTTCATCTaGTCAGGTGGGGAGGTTACA +
Preference number: 4 (lower is better)
Translates to: ISGQPPWGSLSMKTVIQMSPRFI*SGGEVT
Trigger: TGTAACCTCCCCACCTGACCAGATGAACCGCGGGGA...CATTTGGATGACTGTTTTCATGGAAAGTGAGCCCCAGGGAGGCTGGCCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR TCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp CAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QGQLENRQMQSSERWDIQSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTREYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR TCA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAACATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGEHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR TCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGATCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR TCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTGTGGGCCTCCAACATTaGGAATGGGGGAACCGGGTG +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKAVGLQH*EWGNRV
Trigger: CACCCGGTTCCCCCATTCTCAATGTTGGAGGCCCAC...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCTTGTCGGCCTCCGCCTaGTCAGCTCGATCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: WKSTLIVILQIVMSCTCALSASA*SARSKA
Trigger: CGCCTTGGATCGAGCTGAGCAGGCGGAGGCCGACAA...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCCTCCTCGAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCPPRAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGG...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWLSSAL*SSSSTR
Trigger: CCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAG...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR GCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAACTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: ALRQDAKRENQGQLENRQLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp GGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GICHYGWWLTSHLVSRRLASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...AAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCGAGCGCGGAGCCGCCTaGTTCTCCCAGATATGTACT +
Preference number: 4 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSERGAA*FSQICT
Trigger: AGTACATATCTGGGAGAAGCAGGCGGCTCCGCGCTC...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGATGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAACAAGCTCGGCACATTTaGTCTTTCAGTTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGEQARHI*SFSWIS
Trigger: GGAGATCCAACTGAAAGAGCAAATGTGCCGAGCTTG...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561395.5
CDS-3UTR GCA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTGAGCAGCCAGGAAACTaGTGGACACTGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLEQPGN*WTLASA
Trigger: GGCACTTGCCAGTGTCCAGCAGTTTCCTGGCTGCTC...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR CCA 90 bp GACAAAAAGGGTGAACACAAGAGTGCAAAGATGGAGATTAGGGAGCAAGGAAGGCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DKKGEHKSAKMEIREQGRLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...CCTTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGTGTTCACCCTTTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CCA 90 bp CTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGATGCCACTATGGCTGGTaGCTAACTAGTCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: LDGICHYGWWLTSHLVSRCHYGW*LTSHLV
Trigger: CACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCA...TCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
3UTR CAA 72 bp CAAAGTGTGGCAGCATCAACCCGGGAAATGGCACATTaGAACCAGGATCGCCCTGACATGGGCTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QSVAASTREMAH*NQDRPDMGLPF
Trigger: AAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
3UTR CAA 72 bp TCTAGACAAGAACCTAAGACGGAGGGGAGGGCATCTTaGACCCAAAGGAGCCATGGCACGGATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SRQEPKTEGRAS*TQRSHGTDSHR
Trigger: TCTGTGAGAATCCGTGCCATGGCTCCTTTGGGTCAAAGATGCCCTCCCCTCCGTCTTAGGTTCTTGTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGGGGCTCGACTCTCAATaGCTTTCATGCCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQGLDSQ*LSCLSH
Trigger: GTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCC...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
CDS-3UTR TCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AAAATGCACGTGGGGTTTGGTGAAGGTTCACTGACGGTGTGCCGTGGGAACAGGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: KMHVGFGEGSLTVCRGNRLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CCTGTTCCCACGGCACACCGTCAGTGAACCTTCACCAAACCCCACGTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTTCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: LHVCQSERNGSLGRAAWLSYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...AAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317516.12
CDS-3UTR TCA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGTTTATTACATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWFITLA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATGTAATAAA...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR TCA 90 bp GTGAAGTTCACCTCCAGAGTCCAATTTCAGCTGCTCTATTCTCCCAGCCTCTCATCCACCTCAGGAAGCTaGCTTCTCCCTTACCGGACT +
Preference number: 4 (lower is better)
Translates to: VKFTSRVQFQLLYSPSLSSTSGS*LLPYRT
Trigger: AGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGA...TGAGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTCTGGAGGTGAACTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGACGCACAGACACGACTaGAAGCCACCACCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKTHRHD*KPPPQK
Trigger: TTTCTGGGGTGGTGGCTTTCAGTCGTGTCTGTGCGT...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR GCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR GCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR GCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCACTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR GCA 90 bp GAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ELLYNRKHSVCLALRQDAQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...AGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR GCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGAGCGCGGAGCCGCCTaGTTCTCCCAGATATGTACT +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQERGAA*FSQICT
Trigger: AGTACATATCTGGGAGAAGCAGGCGGCTCCGCGCTC...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288398.10
CDS-3UTR GCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGCATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR GCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGCATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR GCA 90 bp AGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RQMQSSERWDIQLDEGVLWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...CAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR GCA 90 bp AATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NRQMQSSERWDIQLDEGVRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...GACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp GTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAAGCTGGATGGCATTTaGCACTATGGCTGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: VKLDGICHYGWWLTSHLVKLDGI*HYGWWL
Trigger: TAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTT...CACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp CTTGGTGATGACACCTCAAGGGTTTTCTGCCACCAGGGAGGTGAAGTTCACCTCACCTCAAGGGTTTTCTaGCACCAGGGAGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LGDDTSRVFCHQGGEVHLTSRVF*HQGGEV
Trigger: AACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGT...GAGGTGAACTTCACCTCCCTGGTGGCAGAAAACCCTTGAGGTGTCATCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CCA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGACAGAGCTCAGAGAGGTaGGACATCCAGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRQSSER*DIQLDE
Trigger: CTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTG...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTAATGACTTTCATGCCTaGTCTCCCTCAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AARVPIRKEWKSRKSSVANDFHA*SPSASS
Trigger: AGAGGAAGCTGAGGGAGACCAGGCATGAAAGTCATT...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR TCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAAAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: ALRQDAKRENQGQLENRQSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR TCA 90 bp AAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: KLDGICHYGWWLTSHLVSLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...GCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR TCA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: ENQGQLENRQMQSSERWDHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR TCA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGTCGGACTTGGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLSDLAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGA...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCAGGCAGAGTGGATaGACGTTTACATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSSRQSG*TFTWKS
Trigger: TGACTTCCATGTAAACGTTCATCCACTCTGCCTGCT...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000560970.6
ENST00000651622.1
CDS-3UTR TCA 90 bp AATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCAGCAGGCAGAGTGGATaGACGTTTACATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NRQMQSSERWDIQLDEGVSRQSG*TFTWKS
Trigger: TGACTTCCATGTAAACGTTCATCCACTCTGCCTGCT...GACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000560970.6
ENST00000651622.1
CDS-3UTR TCA 90 bp GCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATG +
Preference number: 4 (lower is better)
Translates to: AELREVGHPARRGSLGRSESWEK*SKETYM
Trigger: CATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...ACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCACTGTCCTCCGCCTTGTaGAGCTCCTCCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSLSSAL*SSSSTR
Trigger: CCGGGTGCTGGAGGAGCTGCACAAGGCGGAGGACAG...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp GGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATAGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GHPARRGSLGRSEAKKLIASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...TATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000560970.6
ENST00000561395.5
CDS-3UTR GCA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR GCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp CTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LHVCQSERNGSLGRAAWLHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...AAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACACATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAACATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: RQMQSSERWDIQLDEGVLPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...CAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR GCA 90 bp AAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KHSVCLALRQDAKRENQGWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...ACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR GCA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RIDKCRAQRGGTSSSTREWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR GCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGWSSSR*RVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCA...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAAGAAGCTCCCTCCCCTaGTGCTTCCCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLRSSLP*CFPHQL
Trigger: CAGCTGGTGTGGGAAGCAGCAGGGGAGGGAGCTTCT...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGGTTCACTGACGGTGTaGCGTGGGAACAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSGSLTV*RGNRER
Trigger: CCTCTCCCTGTTCCCACGGCACACCGTCAGTGAACC...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGCCAGCAGCGCAAAGTaGACCTCCCGGGGACGCACA +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLASSAK*TSRGRT
Trigger: TGTGCGTCCCCGGGAGGTGCACTTTGCGCTGCTGGC...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCTCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTGCGGGAGGGCTGCAGTaGGAGAGGCCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLAGGLQ*ERPAAA
Trigger: GGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGC...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGGCTCATCTTCCAGCTTaGCGGCGGCCTCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLAHLPA*RRPLRR
Trigger: CCGCCGAAGAGGCCGCCGCCAAGCTGGAAGATGAGC...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357980.9
CDS-3UTR CCA 90 bp CTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAATTTGCCACTATGGCTaGTGGCTAACTAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LDGICHYGWWLTSHLVSRICHYG*WLTSHL
Trigger: GAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAAT...TCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp GTGAAGTTCACCTCCAGAGTCCAATTTCAGCTGCTCTATTCTCCCAGCCTCTCACAGCCAGGAAACTGCTaGACACTGGCAAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: VKFTSRVQFQLLYSPSLSQPGNC*TLASAI
Trigger: TATGGCACTTGCCAGTGTCCAGCAGTTTCCTGGCTG...TGAGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTCTGGAGGTGAACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTTCAGCCTGGTGAGCTaGGCGCTCCGGGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCFSLVS*ALREAT
Trigger: AGTGGCCTCCCGGAGCGCCCAGCTCACCAGGCTGAA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGGGGCTCGACTCTCAATaGCTTTCATGCCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKGLDSQ*LSCLSH
Trigger: GTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCC...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR TCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR TCA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCAGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAAEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR TCA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACAGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACATTGTACAATGTTaGACAAAAGACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: AARVPIRKEWKSRKSSVAYIVQC*TKDHRG
Trigger: CCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTA...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp CTTAGGAGAGCCTTAGCTGTGTGCATCACCCCTGCAACTATGTGGTGGTTGTCATCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LRRALAVCITPATMWWLSSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...TGACAACCACCACATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCTCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAAACTTATATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTKLILA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATATAAGTTT...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR TCA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATG +
Preference number: 4 (lower is better)
Translates to: NAELREVGHPARRGSLGRESWEK*SKETYM
Trigger: CATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATG +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGEESWEK*SKETYM
Trigger: CATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATG +
Preference number: 4 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWESWEK*SKETYM
Trigger: CATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR TCA 90 bp AAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCGAAGACTTAGGTTCATaGGTTCAAGAGCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: KLDGICHYGWWLTSHLVSEDLGS*VQEPQR
Trigger: TCTCTGTGGCTCTTGAACTCATGAACCTAAGTCTTC...GCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR TCA 90 bp AAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAGATTCTCAATAACCTaGCACTTTAAGGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KCRAQRGGTSSSTRESWERFSIT*HFKGSF
Trigger: GAAGGAACCCTTAAAGTGTCAGGTTATTGAGAATCT...CTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR TCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGAGGTTCTCTGAACCCTaGCTAGACCCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKRFSEP*LDPPPN
Trigger: GTTTGGTGGTGGGTCTAGTCAGGGTTCAGAGAACCT...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAACCTCACAGCCTCTGCTaGGACTCTCACAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKPHSLC*DSHKSQ
Trigger: CTGGGATTTGTGAGAGTCTCAGCAGAGGCTGTGAGG...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCAAGCCACAGAACCCTATaGGAGAGCCTCTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: STAGIAFPGAHTFLELLPSHRTL*ESLWLQ
Trigger: CTGTAGCCAGAGGCTCTCTCATAGGGTTCTGTGGCT...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp ACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATCAT +
Preference number: 4 (lower is better)
Translates to: TNAELREVGHPARRGSLGESWEK*SKETYH
Trigger: ATGATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...CCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR GCA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTTGTCGGCCTCCGCCTaGTCAGCTCGATCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALLSASA*SARSKA
Trigger: CGCCTTGGATCGAGCTGAGCAGGCGGAGGCCGACAA...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAAAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ALRQDAKRENQGQLENRQRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR GCA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCTCAGCGGCGTCCGCCTaGTCCTGCAGGCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: EMIFCSTTVKAVLDHANFSAASA*SCRLRI
Trigger: GATCCGGAGCCTGCAGGAGCAGGCGGACGCCGCTGA...GAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAACTCATTCTAGTTCACTaGTCTAGTTCAGCGTTTACA +
Preference number: 4 (lower is better)
Translates to: MQSSERWDIQLDEGVLGELILVH*SSSAFT
Trigger: TGTAAACGCTGAACTAGAGCAGTGAACTAGAATGAG...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR GCA 90 bp CTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTCGTCCAGGCTGGAGTaGGGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LTVKSGPLTPKLTLYNLCSSRLE*GGAISA
Trigger: AGCCGAGATCGCACCACCGCACTCCAGCCTGGACGA...ACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACAGAGGCGGCATCCAATaGTCTGGGCCATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALKASSLMCGNNKENMLDRGGIQ*SGPWQG
Trigger: GCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCT...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAAGCTGGTCCCCTAAGTaGAGAGACTGTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLSWSPK*RDCGPP
Trigger: TGGAGGCCCACAGTCTCTGCACTTAGGGGACCAGCT...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CCA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: ENQGQLENRQMQSSERWDRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp AAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: KHSVCLALRQDAKRENQGRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...ACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp GTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: VSWRIDKCRAQRGGTSSSRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...CGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR CCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR CCA 90 bp ATCTCAGGCCAGCCTCCCTGGGGCTCACTTTCCATGAAAACAGTCATCCAAATGAAGAAGTTGGTCCTTTaGCTTGACTTTCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISGQPPWGSLSMKTVIQMKKLVL*LDFPRQ
Trigger: CTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTT...CATTTGGATGACTGTTTTCATGGAAAGTGAGCCCCAGGGAGGCTGGCCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGGCCTCTGGCTACAGGTaGAGAAAACCACCGCAGATA +
Preference number: 4 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKASGYR*RKPPQI
Trigger: TATCTGCGGTGGTTTTCTCCACCTGTAGCCAGAGGC...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCAGTCAGTCCTGGGCTaGACTGGGATGCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLQSVLG*TGMPLK
Trigger: TTTTAAAGGCATCCCAGTCCAGCCCAGGACTGACTG...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAGAATCCAGTCAGTCCTaGGCTGGACTGGGATGCCTT +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKESSQS*AGLGCL
Trigger: AAGGCATCCCAGTCCAGCCCAGGACTGACTGGATTC...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTGACCCAAAGGAGCCATaGCACGGATTCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFDPKEP*HGFSQS
Trigger: GCTCTGTGAGAATCCGTGCCATGGCTCCTTTGGGTC...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: WKSTLIVILQIVMSCTCASLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp GACAAAAAGGGTGAACACAAGAGTGCAAAGATGGAGATTAGGGAGCAAGGAAGGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: DKKGEHKSAKMEIREQGRSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CCTTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGTGTTCACCCTTTTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAACTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: ALRQDAKRENQGQLENRQLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651622.1
CDS-3UTR TCA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCATCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAASYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVSYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAAAGCAGGCAGAGTGGATaGACGTTTACATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: ALRQDAKRENQGQLENRQSRQSG*TFTWKS
Trigger: TGACTTCCATGTAAACGTTCATCCACTCTGCCTGCT...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000560970.6
ENST00000651622.1
CDS-3UTR TCA 90 bp ACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATT +
Preference number: 4 (lower is better)
Translates to: TNAELREVGHPARRGSLGESWEK*SKETYI
Trigger: AATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...CCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR TCA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGAAGGCATGGTGGTaGGTTTATTACATTAGCATG +
Preference number: 4 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTRKAWW*VYYISM
Trigger: CATGCTAATGTAATAAACTCACCACCATGCCTTCCT...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR TCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACCACGCAGGCAAGAGGTaGGGGAAGCAGTGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: ALKASSLMCGNNKENMLDHAGKR*GKQCER
Trigger: ACGCTCACACTGCTTCCCTCACCTCTTGCCTGCGTG...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTCATCCCCAGGGATTCTaGTTTAACTGGCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKAHPQGF*FNWLWV
Trigger: CACCCAAAGCCAGTTAAATCAGAATCCCTGGGGATG...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp CCCAAAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCACCGATTTCCCCCTTaGGCTGTATTCTTAAATGCC +
Preference number: 4 (lower is better)
Translates to: PKGNTIPPQEADFSLTGLHRFPP*AVFLNA
Trigger: GGCATTTAAGAATACAGCTCAAGGGGGAAATCGGTG...AAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGGGGAGGAGGACTGCTaGAAAAAGGGACGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSGEEDC*KKGRVK
Trigger: CTTAACCCGTCCCTTTTTTCAGCAGTCCTCCTCCCC...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR GCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp CCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: PHLIVFPTLTFLLTLSLALLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...TGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCCTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR GCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp CTTAGGAGAGCCTTAGCTGTGTGCATCACCCCTGCAACTATGTGGTGGTTGTCACCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LRRALAVCITPATMWWLSPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...TGACAACCACCACATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACTATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp CTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGATATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LDGICHYGWWLTSHLVSRYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...TCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp GAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATAGAAAGCACAGTGTGTaGCTGGCTCTAAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: EELLYNRKHSVCLALRQDRKHSV*LALRQD
Trigger: ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCT...ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR GCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTGGCTCCGGATCTTCCTaGGCACCGCCTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGGSGSS*APPPAS
Trigger: GCTCGCTGGAGGCGGTGCGCAGGAAGATCCGGAGCC...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTGTGTGCATCACCCCTaGAACTATGTGGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKACVHHP*NYVVVV
Trigger: GACAACCACCACATAGTTGCAGGGGTGATGCACACA...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTCTGGACACTGGCAAGTaGCATAAGCAGCCAACTAGT +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKALDTGK*HKQPTS
Trigger: ACTAGTTGGCTGCTTATGGCACTTGCCAGTGTCCAG...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVLSFLS*SSSRCR
Trigger: CCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAG...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR CCA 90 bp AAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGGAGCGTATCAATGTaGATGCCCTTGAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: KLDGICHYGWWLTSHLVSRSVSM*MPLNWK
Trigger: TTTCCAATTCAAGGGCATCCACATTGATACGCTCCT...GCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCACAAGAGTGCAAAGATaGAGATTAGGGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSTRVQR*RLGSKE
Trigger: TTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGT...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR CCA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGTCCTTGTCTGTAGGTTaGAATCACTTGGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWSLSVG*NHLGIF
Trigger: AAAAATACCCAAGTGATTCCAACCTACAGACAAGGA...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTACTGACGGTGTGCCGTaGGAACAGGGAGAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFTDGVP*EQGEVK
Trigger: TTTTACCTCTCCCTGTTCCCACGGCACACCGTCAGT...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCGGGCTCGACTCTCAATaGCTTTCATGCCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSGLDSQ*LSCLSH
Trigger: GTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCC...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR TCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSSLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCAGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACGAACCAGGATCGCCCTaGCATGGGCTTGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHEPGSP*HGLAFL
Trigger: CAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTC...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: NGTSSALVRIPTLTKHTVGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...CACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGAAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 4 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGSGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTGGCAGCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGTTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: VAASTREMAHLNQDRPDMFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...CATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATATCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: GHPARRGSLGRSEAKKLISPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...TATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR TCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGTCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR TCA 90 bp GGTAGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCACAGCACCATTAGACTaGGTAAAGCATACCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRTVLDFLHMGSTPRIQPTAPLD*VKHTFQ
Trigger: CTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGT...GGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAGGGCTCGACTCTCAATaGCTTTCATGCCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQGLDSQ*LSCLVS
Trigger: GGAGACCAGGCATGAAAGTCATTGAGAGTCGAGCCC...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR GCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGCATCTTCCAGCTGCTTaGTCCTGTCTTCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLHLPAA*SCLPPP
Trigger: AGGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATG...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGTATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651590.1
CDS-3UTR GCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTGCGTCCGCCTGCTCCTaGAGGCTCCGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLASACS*RLRIFL
Trigger: CAGGAAGATCCGGAGCCTGCAGGAGCAGGCGGACGC...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp CTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGATTCCCAAAAGGACAGTaGTCAAGGTCACTCATTCTA +
Preference number: 4 (lower is better)
Translates to: LALRQDAKRENQGQLENRFPKGQ*SRSLIL
Trigger: TAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA...TCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR GCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGAGCTGTATTGGATCATaGCAATTTCCTTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRSCIGS*QFPYPQ
Trigger: CTGAGGATAAGGAAATTGGCATGATCCAATACAGCT...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR GCA 90 bp TCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGTGAGTTCATTTTCATaGCGATGTCATTATACAAGA +
Preference number: 4 (lower is better)
Translates to: SCRWELLALFPRGSSGQVVSSFS*RCHYTR
Trigger: TCTTGTATAATGACATCGGCATGAAAATGAACTCAC...CACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCGCCCCAAGTCCACAGTaGCTCTCCCACTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCAPSPQ*LSHLTC
Trigger: ACAGGTCAAGTGGGAGAGGCACTGTGGACTTGGGGC...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCAACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAATLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317516.12
CDS-3UTR CCA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTACAACCAGGGGCTTCTaGCATGAGTTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLTTRGF*HEFLFS
Trigger: TGAAAACAGGAACTCATGCCAGAAGCCCCTGGTTGT...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CCA 90 bp ATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGGAGCATGAAGTCAAGCTaGATGGCATTTGCCACTATG +
Preference number: 4 (lower is better)
Translates to: ICHYGWWLTSHLVSRRLRSMKSS*MAFATM
Trigger: CATAGTGGCAAATGCCATCCAGCTTGACTTCATGCT...CCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAGCTTCCAAAGGGCAGTaGACAAAGAGCTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKASKGQ*TKSLGE
Trigger: CTCTCCTAAGCTCTTTGTCCACTGCCCTTTGGAAGC...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGTGGCATAGCTTTCCCTaGTGCTCACACATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKWHSFP*CSHILG
Trigger: TCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCA...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAACTGCCTCATTTTCTGTaGAGTTCCTCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKLPHFL*SSSQPL
Trigger: CAGAGGCTGTGAGGAACTCCACAGAAAATGAGGCAG...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTGGGCTCGACTCTCAATaGCTTTCATGCCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTGLDSQ*LSCLSH
Trigger: GTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCC...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
CDS-3UTR TCA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: WKSTLIVILQIVMSCTCALQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GACAAAAAGGGTGAACACAAGAGTGCAAAGATGGAGATTAGGGAGCAAGGAAGGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: DKKGEHKSAKMEIREQGRLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CCTTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGTGTTCACCCTTTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR TCA 90 bp TCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCGGGAAATGGCACATTTaGACCAGGATCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: STPDCVSNINLPVDSIIGGKWHI*TRIALT
Trigger: TGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCC...GCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCATTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCTCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp GGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATAAAACTTATATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHPARRGSLGRSEAKKLIKLILA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATATAAGTTT...TATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR TCA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATATT +
Preference number: 4 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGESWEK*SKETYI
Trigger: AATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR TCA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGACAGCACCATTAGACTaGGTAAAGCATACCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKTAPLD*VKHTFQ
Trigger: CTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGT...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR TCA 90 bp GAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCCAATGTGGATGCCCTTaGATTGGAAAATTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: EVKLDGICHYGWWLTSHLQCGCP*IGKLFC
Trigger: GCAAAACAATTTTCCAATTCAAGGGCATCCACATTG...GAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR TCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGTGGAATCCAACGGTGTaGAAAGAAGTTGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKWNPTV*KEVGPL
Trigger: CAAAGGACCAACTTCTTTTCACACCGTTGGATTCCA...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCAGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GATGAGATGATTAGAACTAGGCATGCTTGTAAGACATTACTCATTTCTAGACAACTCAGCCCGCTCCTCTaGACGTTCCAGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: DEMIRTRHACKTLLISRQLSPLL*TFQVAL
Trigger: GAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAG...TTGTCTAGAAATGAGTAATGTCTTACAAGCATGCCTAGTTCTAATCATCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCACAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR GCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACACATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp GAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: EELLYNRKHSVCLALRQDPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...ATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR GCA 90 bp GGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATACCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GHPARRGSLGRSEAKKLIPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...TATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288398.10
ENST00000560970.6
CDS-3UTR GCA 90 bp ATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGGGGAAGAATGTGCAAGTaGAAAGGAGCGTATCAATGT +
Preference number: 4 (lower is better)
Translates to: ICHYGWWLTSHLVSRRLRGRMCK*KGAYQC
Trigger: ACATTGATACGCTCCTTTGCACTTGCACATTCTTCC...CCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp AATGAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTCACACAGGAAGAATGTaGAAGTGCAAAGGAGCGTAT +
Preference number: 4 (lower is better)
Translates to: NEHEVKLDGICHYGWWLTHTGRM*KCKGAY
Trigger: ATACGCTCCTTTGCACTTGCACATTCTTCCTGTGTG...AGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAAGAGCCTTAGCTGTGTaGATCACCCCTGCAACTATG +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLRALAV*ITPATM
Trigger: CATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCT...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCCATAGCTTTCCCTGGTaGTCACACATTCTTGGAATT +
Preference number: 4 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSHSFPW*SHILGI
Trigger: AATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATG...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACTCCTGCTGGAGAATTTaGGGGAGGCAGGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: ALKASSLMCGNNKENMLDSCWRI*GRQASS
Trigger: GGAAGATGCCTGCCTCCCGCAAATTCTCCAGCAGGA...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACAAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp ACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTCGGCTTCAGCATCGGTaGCCTTTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TPDCVSNINLPVDSIIGTRLQHR*PFSLPA
Trigger: AGCTGGCAGAGAAAAAGGCCACCGATGCTGAAGCCG...AGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGTCCAGCTGTCGGACTTaGCCTTCTGAGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLSSCRT*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGA...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp GGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATAAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: GHPARRGSLGRSEAKKLIRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...TATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000560970.6
ENST00000561395.5
CDS-3UTR CCA 90 bp ATCTCAGGCCAGCCTCCCTGGGGCTCACTTTCCATGAAAACAGTCATCCAAATGCCTAAATGTCGTCTCTaGAGTTCTCATTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: ISGQPPWGSLSMKTVIQMPKCRL*SSHLQS
Trigger: GCTTTGTAAATGAGAACTCCAGAGACGACATTTAGG...CATTTGGATGACTGTTTTCATGGAAAGTGAGCCCCAGGGAGGCTGGCCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTTGACTTTCCGAGGCAGAAGATATATCACAGTTACTaGGGAAGAGATTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IQRCEKKLVLWLDFPRQKIYHSY*GRDWGP
Trigger: TGGCCCCCAATCTCTTCCCCAGTAACTGTGATATAT...CTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCGGGCTCGACTCTCAATaGCTTTCATGCCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCGLDSQ*LSCLSH
Trigger: GTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCC...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp GATGAGATGATTAGAACTAGGCATGCTTGTAAGACATTACTCATTTCTAGACAAGGCACATTTGCCTTCTaGGAGCTCAGCCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DEMIRTRHACKTLLISRQGTFAF*ELSPLL
Trigger: GAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCC...TTGTCTAGAAATGAGTAATGTCTTACAAGCATGCCTAGTTCTAATCATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR TCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTAGCCTGAGCCTCCAGTaGCTTCAAGTTGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSASLSLQ*LQVVRH
Trigger: GTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCT...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR TCA 90 bp CTCGACGAGGGAGTCTTGGGAGAAGTGAAGCAAAGAAACTTATATGGAAGTCATCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: LDEGVLGEVKQRNLYGSHLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...ATGACTTCCATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561395.5
CDS-3UTR TCA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: NYSSHIEKQAGKASLSANLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp GCGAGTACTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTGATCCATTATTCTCCTACAGATTGTCATaGGCTGCACGTGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: ASTYPLQPLMLSRSDPLFSYRLS*AARVPI
Trigger: GATTGGCACACGTGCAGCTCATGACAATCTGTAGGA...GAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGTTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp TACTCCAACTCTTACTGCCTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCAGCAGGCAGAGTGGATaGACGTTTACATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YSNSYCLTVKSGPLTPKLSRQSG*TFTWKS
Trigger: TGACTTCCATGTAAACGTTCATCCACTCTGCCTGCT...GAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAGGCAGTAAGAGTTGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp GGTAGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 4 (lower is better)
Translates to: GRTVLDFLHMGSTPRIQPGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...GGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp CTTAGGAGAGCCTTAGCTGTGTGCATCACCCCTGCAACTATGTGGTGGTTGTCAATGGTGTTTGCACAATaGATAAATCACCTAACGACA +
Preference number: 4 (lower is better)
Translates to: LRRALAVCITPATMWWLSMVFAQ*INHLTT
Trigger: TGTCGTTAGGTGATTTATTCATTGTGCAAACACCAT...TGACAACCACCACATAGTTGCAGGGGTGATGCACACAGCTAAGGCTCTCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCACACACAGGGAACTCTaGAATCCTGTTCGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSTHREL*NPVRVC
Trigger: GCAAACACGAACAGGATTTCAGAGTTCCCTGTGTGT...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR GCA 90 bp AAACATCAATCACAAACACAGGATGAGATGATTAGAACTAGGCATGCTTGTAAGCTTCTGCAAAGCTGTTaGCAGACGCTCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: KHQSQTQDEMIRTRHACKLLQSC*QTLLGT
Trigger: CGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAG...CTTACAAGCATGCCTAGTTCTAATCATCTCATCCTGTGTTTGTGATTGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTCAAGCTCGGCACATTTaGCTTCTGAGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFQARHI*LLRAQP
Trigger: GGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTG...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp AATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: NGTSSALVRIPTLTKHTVHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...CACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp ATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: ILQIVMSCTCANQKGMEVPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...GACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGTATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288398.10
CDS-3UTR GCA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTGGAGAATAGACAAATaGAGAGCTCAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NYSSHIEKQAGKASLSANWRIDK*RAQRGG
Trigger: CCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR CCA 90 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCGTTGCCAGACGCTCCTaGGCACGATCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: EMIFCSTTVKAVLDHANFVARRS*ARSNSS
Trigger: GGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAAC...GAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CCA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGCTGTTAAAGCTGTATTaGATCATGCCAATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRLLKLY*IMPISL
Trigger: TAAGGAAATTGGCATGATCCAATACAGCTTTAACAG...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR CCA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTGGTGTGAAAAGAAGTTaGTCCTTTGGCTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: RPKQVSSSQADLKGWIKAGVKRS*SFGLTF
Trigger: GAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACC...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCAAGTGACTTAATGTCCTaGGAAGGTCAGTTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: STAGIAFPGAHTFLELLPSDLMS*EGQFQV
Trigger: CACCTGAAACTGACCTTCCCAGGACATTAAGTCACT...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGACCACCCGTTTCCCCTaGGAGCGTTTACTTTGGATC +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLTTRFP*ERLLWI
Trigger: GATCCAAAGTAAACGCTCCCAGGGGAAACGGGTGGT...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
3UTR CAA 72 bp GAATCCAACGGTGTGAAAAGAAGTTGGTCCTTTGGCTaGACTTTCCGAGGCAGAAGAGGCAAGCTATCAATT +
Preference number: 4 (lower is better)
Translates to: ESNGVKRSWSFG*TFRGRRGKLSI
Trigger: AATTGATAGCTTGCCTCTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCGTTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCGAGTACTTCTCAGCCTaGGCCTCCAGTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVEYFSA*ASSDFK
Trigger: CTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTC...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CTGTCTTCCTTCTGCGAGTACTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTACATTGTACAATGTTaGACAAAAGACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSSFCEYLSSAAINAFKVYIVQC*TKDHRG
Trigger: CCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTA...GACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAGGAAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 4 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVSGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAATCTCCTGGGCATCTTTaGGAGCCTCAGAGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQSPGHL*EPQSIC
Trigger: ACAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGA...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGGAGTCTTGGGAGAAGTaGAGCAAAGAAACTTATCTT +
Preference number: 4 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKESWEK*SKETYL
Trigger: AAGATAAGTTTCTTTGCTTCACTTCTCCCAAGACTC...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR TCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTGTGAGGGAAGCAGTGTaGGCGTGCACTTACATCGGT +
Preference number: 4 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTVREAV*ACTYIG
Trigger: ACCGATGTAAGTGCACGCTCACACTGCTTCCCTCAC...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCTATAGAGCAGGCATCTaGTCTGCATTATACAAAGTA +
Preference number: 4 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSYRAGI*SALYKV
Trigger: TACTTTGTATAATGCAGATCAGATGCCTGCTCTATA...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp ATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCACCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: IPTLTKHTVLLNSLQSVAPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...TGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FDTETKSFCTIESTVCAWSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR GCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCATCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp GTGAAGTTCACCTCCAGAGTCCAATTTCAGCTGCTCTATTCTCCCAGCCTCTCAAAAGTGAAGAAAACCTaGCATTCTCTACACAAACCT +
Preference number: 4 (lower is better)
Translates to: VKFTSRVQFQLLYSPSLSKVKKT*HSLHKP
Trigger: AGGTTTGTGTAGAGAATGCCAGGTTTTCTTCACTTT...TGAGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTCTGGAGGTGAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp ATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCCTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ILQIVMSCTCANQKGMEVLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...GACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTGCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: PDCVSNINLPVDSIIGTLHLRCP*VSFAVT
Trigger: TGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATG...CAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR TCA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 4 (lower is better)
Translates to: NEELLYNRKHSVCLALRQGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR TCA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATACAGCACCATTAGACTaGGTAAAGCATACCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NYSSHIEKQAGKASLSANTAPLD*VKHTFQ
Trigger: CTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGT...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR TCA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCACAAAAGGAAAGAAAGTaGAGAAAACCTGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: STAGIAFPGAHTFLELLPQKERK*RKPGIL
Trigger: GAGAATGCCAGGTTTTCTTCACTTTCTTTCCTTTTG...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp TCAACTGCTGGCATAGCTTTCCCTGGTGCTCACACATTCTTGGAATTGTTACCAACTAATTTCAAGACCTaGGACCCTTCAGTTATTTGC +
Preference number: 4 (lower is better)
Translates to: STAGIAFPGAHTFLELLPTNFKT*DPSVIC
Trigger: GCAAATAACTGAAGGGTCTCAGGTCTTGAAATTAGT...TGGTAACAATTCCAAGAATGTGTGAGCACCAGGGAAAGCTATGCCAGCAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp GATGAGATGATTAGAACTAGGCATGCTTGTAAGACATTACTCATTTCTAGACAATTGGTGAAGGTTCACTaGCGGTGTGCCGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: DEMIRTRHACKTLLISRQLVKVH*RCAVGT
Trigger: TGTTCCCACGGCACACCGTCAGTGAACCTTCACCAA...TTGTCTAGAAATGAGTAATGTCTTACAAGCATGCCTAGTTCTAATCATCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTGCTTCCTCCAGCTTCTaGAAAGCTGTTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGASSSF*KAVARR
Trigger: GCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGC...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTCATGAGCTGCACGTGTaGCAATCAGAAAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALHELHV*QSERNG
Trigger: TCCATTCCTTTCTGATTGGCACACGTGCAGCTCATG...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLPLSFF*SDTSSS
Trigger: AGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGG...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR GCA 90 bp TTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCTTTTTCAGCCAATTCCTTaGATTTGCATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FQPYRETSRQGQPFSQFLFQPIP*ICISAE
Trigger: TTCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAA...AAGGAATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp ACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTAGGATCGCCCTGACATaGGCTTGCCTTTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: TPDCVSNINLPVDSIIGTRIALT*ACLFVC
Trigger: ACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCT...AGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp ACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTACTCTCTACAAAGTGTaGCAGCATCAACCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: TPDCVSNINLPVDSIIGTTLYKV*QHQPGK
Trigger: TTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGT...AGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTACAACCAGGGGCTTCTaGCATGAGTTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSATTRGF*HEFLFS
Trigger: TGAAAACAGGAACTCATGCCAGAAGCCCCTGGTTGT...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CCA 90 bp GAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTATTGTTTTGCCAGGTTaGTATTCAACCATAAGGATT +
Preference number: 4 (lower is better)
Translates to: EHEVKLDGICHYGWWLTSIVLPG*YSTIRI
Trigger: AATCCTTATGGTTGAATACCAACCTGGCAAAACAAT...ACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CCA 90 bp TACTCCAACTCTTACTGCCTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACAAGAGTGCAAAGATaGAGATTAGGGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: YSNSYCLTVKSGPLTPKLTRVQR*RLGSKE
Trigger: TTCCTTGCTCCCTAATCTCCATCTTTGCACTCTTGT...GAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAGGCAGTAAGAGTTGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 4 (lower is better)
Translates to: TDCYPTDCHELHVCQSERSGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTTAACATGAAGGACTaGAAAGAGTGGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTFNMKD*KEWKST
Trigger: TGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAA...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTTATTACATTAGCATaGGGGCAGGGTGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTVKSGPLTPKLTLYNLCFITLA*GQGVSR
Trigger: CCTGCTTACACCCTGCCCTCATGCTAATGTAATAAA...ACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCAAGATTCTCAATAACCTaGCACTTTAAGGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSRFSIT*HFKGSF
Trigger: GAAGGAACCCTTAAAGTGTCAGGTTATTGAGAATCT...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR TCA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAACACCCAATAACTGTTaGCATTTCGCCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSTPNNC*HFANFF
Trigger: GAAAAAGTTGGCGAAATGTCAACAGTTATTGGGTGT...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR GCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSASNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTCAAACAAGAGGACCTaGTATTTCAAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCSNKRT*YFKEQC
Trigger: GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR GCA 90 bp AATGAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTATTGGAAAATTGTTTTaGCAGGTTGGTATTCAACCA +
Preference number: 4 (lower is better)
Translates to: NEHEVKLDGICHYGWWLTIGKLF*QVGIQP
Trigger: TGGTTGAATACCAACCTGGCAAAACAATTTTCCAAT...AGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR GCA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCAAGCTGTATTGGATCATaGCAATTTCCTTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSSCIGS*QFPYPQ
Trigger: CTGAGGATAAGGAAATTGGCATGATCCAATACAGCT...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR GCA 90 bp TACTCCAACTCTTACTGCCTAACAGTAAAATCTGGGCCATTAACTCCCAAGCTCTACTCCAACTCTTACTaGCTAACAGTAAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: YSNSYCLTVKSGPLTPKLYSNSY*LTVKSG
Trigger: CCCAGATTTTACTGTTAGGCAGTAAGAGTTGGAGTA...GAGCTTGGGAGTTAATGGCCCAGATTTTACTGTTAGGCAGTAAGAGTTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR GCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAAGCTGTATTCTTAAATaGCTTCTAAGTCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLSCILK*LLSLRA
Trigger: AGCCCTGAGACTTAGAAGGCATTTAAGAATACAGCT...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCAAAACGAAAGAATGTaGTCGCAGCTAAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTQNERM*SQLRRF
Trigger: AAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTG...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGTTTGGATCAGCGAGATaGAAAACAAAGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLFGSAR*KTKAQE
Trigger: CTCCTGAGCCTTTGTTTTCCATCTCGCTGATCCAAA...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAGCAGATCTTAAGGGGTaGATTAAGGCTTACACTAAT +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLADLKG*IKAYTN
Trigger: ATTAGTGTAAGCCTTAATCCACCCCTTAAGATCTGC...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAGCTCAGAGTCATATATaGTTTTTGGCTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KPPQIQSPPISPLSCILKAQSHI*FLALFP
Trigger: TGGAAAAAGAGCCAAAAACCATATATGACTCTGAGC...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR TCA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTTACATTGTACAATGTTaGACAAAAGACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALYIVQC*TKDHRG
Trigger: CCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTA...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGAGTGGAAATCCACACTaGTTGTTATCCTACAGATTG +
Preference number: 4 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLSGNPH*LLSYRL
Trigger: CAATCTGTAGGATAACAATCAGTGTGGATTTCCACT...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTCATTATCTATCTGTATaGGAGAAAAGGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAHYLSV*EKRGGG
Trigger: TCCTCCTCCCCTTTTCTCTCATACAGATAGATAATG...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR GCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGCAGATTGTCATGAGCTaGACGTGTGCCAATCAGAAA +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLQIVMS*TCANQK
Trigger: TTTCTGATTGGCACACGTGCAGCTCATGACAATCTG...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTAATAATAAAGAAAACATaGTTGACAACCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLIIKKT*LTTLSS
Trigger: GGAGGAGAGGGTTGTCAAGCATGTTTTCTTTATTAT...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp GATGAGATGATTAGAACTAGGCATGCTTGTAAGACATTACTCATTTCTAGACAACACAGAGCAGTCAGGTaGACCTCCACCAACAATTCA +
Preference number: 4 (lower is better)
Translates to: DEMIRTRHACKTLLISRQHRAVR*TSTNNS
Trigger: TGAATTGTTGGTGGAGGTGCACCTGACTGCTCTGTG...TTGTCTAGAAATGAGTAATGTCTTACAAGCATGCCTAGTTCTAATCATCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCAGAACCAGGGTCAGCTaGAGAATAGACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVRTRVS*RIDKCR
Trigger: TCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR CCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTGAACTTCCCACCCACTaGAAACGGCAAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTELPTH*KRQKER
Trigger: TCTTTCCTTTTGCCGTTTCCAGTGGGTGGGAAGTTC...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTCTTGCATCCTGTAGGTaGGAGCTTCTCGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTLASCR*ELLALF
Trigger: AAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAG...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCAGGCAGTTAAAAGTCTaGGAGTTGTGCGGTAACACA +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVRQLKV*ELCGNT
Trigger: TGTGTTACCGCACAACTCCCAGACTTTTAACTGCCT...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCTGGGAGCGTTTACTTTaGATCAGCGAGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVWERLL*ISEMEN
Trigger: GTTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCA...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR TCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTCTCCAATTTAGTTACTaGCCTCTCCGCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLLQFSY*PLRKLS
Trigger: GCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAG...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR TCA 90 bp CACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCACTTCTATCATTGGCACTTTaGATGGAACTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HLIVFPTLTFLLTLSLALLSLAL*MELLLL
Trigger: AAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAG...AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR TCA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGTACATTGTACAATGTTaGACAAAAGACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLYIVQC*TKDHRG
Trigger: CCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTA...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGTATCTGTCTTCCTTCTaGGAGTACTTATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELYLSSF*EYLSSA
Trigger: TGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATA...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317516.12
CDS-3UTR GCA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGAAAGTCTGGGAGTTGTaGGGTAACACAAACTCACAA +
Preference number: 4 (lower is better)
Translates to: YLSVQTRGPAISRSSAELKVWEL*GNTNSQ
Trigger: TTGTGAGTTTGTGTTACCGCACAACTCCCAGACTTT...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTACAACCAGGGGCTTCTaGCATGAGTTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGTTRGF*HEFLFS
Trigger: TGAAAACAGGAACTCATGCCAGAAGCCCCTGGTTGT...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR TCA 90 bp CTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 4 (lower is better)
Translates to: LIIYQFKQEDLLFQGAVLGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...CAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 4 (lower is better)
Translates to: PHYLSVQTRGPAISRSSAGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCAAACACAGGATGAGATaGTTAGAACTAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVKHRMR*LELGML
Trigger: AAGCATGCCTAGTTCTAATCATCTCATCCTGTGTTT...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR GCA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTTCACTGAGGATAAAATaGACGTGGGGTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGSLRIK*TWGLVK
Trigger: CTTCACCAAACCCCACGTGCATTTTATCCTCAGTGA...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CCA 90 bp AACAGTAAAATCTGGGCCATTAACTCCCAAGCTCACATTGTACAATCTGTGTTTACAAAATTAAAGGCTTaGTTACTCAGCAGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: NSKIWAINSQAHIVQSVFTKLKA*LLSRGF
Trigger: GAACCCTCTGCTGAGTAACCAAGCCTTTAATTTTGT...AAACACAGATTGTACAATGTGAGCTTGGGAGTTAATGGCCCAGATTTTACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR TCA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCGGAGCAGTGCTGAATTaGTATAAGTATTCTACCATA +
Preference number: 4 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVGAVLN*YKYSTI
Trigger: TATGGTAGAATACTTATATCAATTCAGCACTGCTCC...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR TCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTAGGAAGGCATGGTGGTaGGTTTATTACATTAGCATG +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLRKAWW*VYYISM
Trigger: CATGCTAATGTAATAAACTCACCACCATGCCTTCCT...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR GCA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTTTCCCAAAAGGACAGTaGTCAAGGTCACTCATTCTA +
Preference number: 4 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLFPKGQ*SRSLIL
Trigger: TAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR GCA 90 bp GCTCTTAAAGCCAGCTCCCTTATGTGTGGGAATAATAAAGAAAACATGCTTGACACACTCTATGGTGTTTaGACAATGAATAAATCACCT +
Preference number: 4 (lower is better)
Translates to: ALKASSLMCGNNKENMLDTLYGV*TMNKSP
Trigger: AGGTGATTTATTCATTGTGCAAACACCATAGAGTGT...GTCAAGCATGTTTTCTTTATTATTCCCACACATAAGGGAGCTGGCTTTAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR GCA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTGAACTTTTGCTTTCCTaGCTCATTTTCTGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTELLLS*LIFCGV
Trigger: AACTCCACAGAAAATGAGGCAGGAAAGCAAAAGTTC...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610733.1
3UTR CAA 72 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATaGGATCATGCCAATTTCCTTATCCTCAGATTCTCA +
Preference number: 4 (lower is better)
Translates to: EMIFCSTTVKAV*DHANFLILRFS
Trigger: TGAGAATCTGAGGATAAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS-3UTR CCA 90 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTGTTAAAGCTGTATTaGATCATGCCAATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: EMIFCSTTVKAVLDHANFLLKLY*IMPISL
Trigger: TAAGGAAATTGGCATGATCCAATACAGCTTTAACAG...GAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS GCA 90 bp GAGGGCTGCAGTGGGAGAGGCCGGCTGCTGCCCTGCGGACCCGGCTaGCGCGGCTGTCCTGGCTGCCCAGCGCCGGTCCGCCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: EGCSGRGRLLPCGPG*RGCPGCPAPVRPAQ
Trigger: CTGGGCGGGGCGGACCGGCGCTGGGCAGCCAGGACAGCCGCGGCAGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCACTGCAGCCCTC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334895.10
CDS GCA 90 bp GTAGGCGGGCGGGAGGGCTGCAGTGGGAGAGGCCGGCTGCTGCCCTaGGGACCCGGCTGCCGCGGCTGTCCTGGCTGCCCAGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: VGGREGCSGRGRLLP*GPGCRGCPGCPAPV
Trigger: GACCGGCGCTGGGCAGCCAGGACAGCCGCGGCAGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGCCCGCCTAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334895.10
ENST00000404484.9
CDS GCA 90 bp AGCTACTCCCCGCCATCGCGCCGGACGGTAGGCGGGCGGGAGGGCTaGAGTGGGAGAGGCCGGCTGCTGCCCTGCGGACCCGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SYSPPSRRTVGGREG*SGRGRLLPCGPGCR
Trigger: GCGGCAGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGCCCGCCTACCGTCCGGCGCGATGGCGGGGAGTAGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000404484.9
ENST00000558544.5
ENST00000558910.3
ENST00000651590.1
CDS-3UTR CAA 90 bp GGCTTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGCCTTCACACGGGCGTCGGGTaGGCTGGGGCCCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: GFSLGGGLFGGQEAVLRLHTGVG*AGAPRA
Trigger: AGCCCGAGGGGCCCCAGCCAACCCGACGCCCGTGTG...AAGGCGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CAA 90 bp GGCAGCGGCGGGCGGGCGCGGGCGGCCGGCACGGACCGGGTGTTAGACACACACCGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GSGGRARAAGTDRVLDTHRSNFS*AAMSSS
Trigger: CGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCG...GTGTGTGTCTAACACCCGGTCCGTGCCGGCCGCCCGCGCCCGCCCGCCGCTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS-3UTR CAA 90 bp GGGCGGGCGCGGGCGGCCGGCACGGACCGGGTGTTAGACACACACAACACACGGACGTCGGCTTCAGCCTaGGCGGCGGCCTCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: GRARAAGTDRVLDTHNTRTSASA*AAASSA
Trigger: CGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACGT...CCGTGTGTTGTGTGTGTCTAACACCCGGTCCGTGCCGGCCGCCCGCGCCCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS GCA 90 bp GCAGGAGCGGCGGGGCGAGCGCGCGGTCGGGCGGAGGAGCGGGAGTaGGAGCGCGGAGCCGCCTGCTTCTCCCAGATATGTACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AGAAGRARGRAEERE*ERGAACFSQICTFP
Trigger: TGGGAAAGTACATATCTGGGAGAAGCAGGCGGCTCCGCGCTCGCACTCCCGCTCCTCCGCCCGACCGCGCGCTCGCCCCGCCGCTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000358278.7
ENST00000560975.5
ENST00000610733.1
ENST00000651344.1
CDS CCA 90 bp AGCCTGGTGAGCTGGGCGCTCCGGGAGGCCACTGCACTAGGGCTCTaGCTTCCACTTCTAGGGCCCCTCCGCGGCGCGGTGGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: SLVSWALREATALGL*LPLLGPLRGAVVTR
Trigger: CCGGGTCACCACCGCGCCGCGGAGGGGCCCTAGAAGTGGAAGCCAGAGCCCTAGTGCAGTGGCCTCCCGGAGCGCCCAGCTCACCAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CAA 90 bp CGTCGGCTTCAGCCTTGGCGGCGGCCTCTTCGGCGGCCAGGAGGCTGTCCTCCGAGGCTGTCCTCCGCCTaGTGCAGCTCCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RRLQPWRRPLRRPGGCPPRLSSA*CSSSST
Trigger: GGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCT...CGGAGGACAGCCTCCTGGCCGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS GCA 90 bp GCGCGCGGTCGGGCGGAGGAGCGGGAGTGCGAGCGCGGAGCCGCCTaGTTCTCCCAGATATGTACTTTCCCAAGGGGGCGACCGCATTCC +
Preference number: 5 (lower is better)
Translates to: ARGRAEERECERGAA*FSQICTFPRGRPHS
Trigger: GGAATGCGGTCGCCCCCTTGGGAAAGTACATATCTGGGAGAAGCAGGCGGCTCCGCGCTCGCACTCCCGCTCCTCCGCCCGACCGCGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000358278.7
ENST00000560975.5
ENST00000610733.1
ENST00000651344.1
CDS GCA 90 bp CTACGTCGGCTTCAGCCTGGTGAGCTGGGCGCTCCGGGAGGCCACTaGACTAGGGCTCTGGCTTCCACTTCTAGGGCCCCTCCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LRRLQPGELGAPGGH*TRALASTSRAPPRR
Trigger: GCGCCGCGGAGGGGCCCTAGAAGTGGAAGCCAGAGCCCTAGTGCAGTGGCCTCCCGGAGCGCCCAGCTCACCAGGCTGAAGCCGACGTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS CCA 90 bp CGAGCTGGAACCGCTCCGCGGCTCACCCCGCACACCCACCTGCCCTaGGACGAGACTCCTGCCGAGGTCTCAGCGGGCTCAAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: RAGTAPRLTPHTHLP*DETPAEVSAGSSPL
Trigger: CAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGAGCGGTTCCAGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS GCA 90 bp TTACCCGAGCTGGAACCGCTCCGCGGCTCACCCCGCACACCCACCTaGCCTGGGACGAGACTCCTGCCGAGGTCTCAGCGGGCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LPELEPLRGSPRTPT*PGTRLLPRSQRAQV
Trigger: GACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGAGCGGTTCCAGCTCGGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561425.5
CDS CCA 90 bp AGAGAAGCTACGTCGGCTTCAGCGGTCTCCCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGGGTGCCCGCGCGCTCCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: REATSASAVSLSFLS*SSSRCRVPARSSAA
Trigger: CGCCGCTGAGGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAGGGAGACCGCTGAAGCCGACGTAGCTTCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000404484.9
ENST00000558868.5
ENST00000558910.3
ENST00000559281.6
ENST00000560959.5
ENST00000651590.1
CDS CCA 90 bp AGCCTGGCTCTTGCGTTTCCCTTCCTTCTTTCCAGACGCGCGCCCTaGCCGCCCTGGGTGGTGGTGGGGGTAGGGTGGTGGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: SLALAFPFLLSRRAP*PPWVVVGVGWWLPE
Trigger: CTCGGGGAGCCACCACCCTACCCCCACCACCACCCAGGGCGGCCAGGGCGCGCGTCTGGAAAGAAGGAAGGGAAACGCAAGAGCCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 90 bp CGAGCTGGAACCGCTCCGCGGCTCACCCCGCACACCCACCTGCCCTaGGACGAGACTCCTGCCGAGGTCTCAGCGGGCTCAAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: RAGTAPRLTPHTHLP*DETPAEVSAGSSPL
Trigger: TAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGAGCGGTTCCAGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS GCA 90 bp GGAGAGAGAGAAAGAGAAAGAGTTAGCCATTCGTGCGCCACGCCGTaGCGCGCGCCCCGGGTACCTTGGCGGCGGCCTCTTCGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GERERERVSHSCATP*RAPRVPWRRPLRRP
Trigger: TGGCCGCCGAAGAGGCCGCCGCCAAGGTACCCGGGGCGCGCGGCACGGCGTGGCGCACGAATGGCTAACTCTTTCTCTTTCTCTCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558314.5
CDS GCA 90 bp TCCGCGGCTCACCCCGCACACCCACCTGCCCTGGGACGAGACTCCTaGCGAGGTCTCAGCGGGCTCAAGTCCACTACTTGGGGACACAGA +
Preference number: 5 (lower is better)
Translates to: SAAHPAHPPALGRDS*RGLSGLKSTTWGHR
Trigger: TCTGTGTCCCCAAGTAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS GCA 90 bp TCCGCGGCTCACCCCGCACACCCACCTGCCCTGGGACGAGACTCCTaGCGAGGTCTCAGCGGGCTCAAGTCCACTGCTTGCTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: SAAHPAHPPALGRDS*RGLSGLKSTACSCL
Trigger: AAGACAGGAGCAAGCAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCCAGGGCAGGTGGGTGTGCGGGGTGAGCCGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS TCA 90 bp AGCACCCCATTCGTGGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTaGGAGCTCAGCCCGCTCCTCTGCACGTTCCAGGTCGCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: STPFVASWRRARLPF*ELSPLLCTFQVALN
Trigger: ATTGAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGGTAAGCGGGCCCGGCGCCAGGAGGCCACGAATGGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS-3UTR CAA 90 bp GCTCGGGGCGCCGCCGAGTTGGAGTGCAAAGGACCCGAGGTAACTTCCTCTTTACGGGGCGCCGCCGAGTaGGAGTGCAAAGGACCCGAG +
Preference number: 5 (lower is better)
Translates to: ARGAAELECKGPEVTSSLRGAAE*ECKGPE
Trigger: CTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCG...TAAAGAGGAAGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS CCA 90 bp CAGAAGGTCATGCTGTTTAGTCACTGCTCTGCAGCACCCCATTCGTaGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QKVMLFSHCSAAPHS*PPGAGPAYPSESSA
Trigger: GGCTGAGCTCTCAGAAGGGTAAGCGGGCCCGGCGCCAGGAGGCCACGAATGGGGTGCTGCAGAGCAGTGACTAAACAGCATGACCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS CCA 90 bp GGACGAGACTCCTGCCGAGGTCTCAGCGGGCTCAAGTCCACTACTTaGGGACACAGAAGAACGCCACTGCTGGCCTGGCTTTCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRDSCRGLSGLKSTT*GHRRTPLLAWLSGC
Trigger: ACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS-3UTR CAA 90 bp GCTCGGGGCGCCGCCGAGTTGGAGTGCAAAGGACCCGAGGTAACTTCCTCTTTAGCTCAAGTCCACTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ARGAAELECKGPEVTSSLAQVHC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGTGGACTTGAGC...TAAAGAGGAAGTTACCTCGGGTCCTTTGCACTCCAACTCGGCGGCGCCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561425.5
CDS GCA 90 bp TCCTCCCTCTCCACTCTCAGAGTAAAGCAAGCCAGCAGCGCAAAGTaGACCTCCCGGGGACGCACAGACACGACTGAAAGCCACCACCCC +
Preference number: 5 (lower is better)
Translates to: SSLSTLRVKQASSAK*TSRGRTDTTESHHP
Trigger: GGGGTGGTGGCTTTCAGTCGTGTCTGTGCGTCCCCGGGAGGTGCACTTTGCGCTGCTGGCTTGCTTTACTCTGAGAGTGGAGAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CAA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGGCTGTCCTCCGCCTaGTGCAGCTCCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: NAELREVGHPARRGSLGRRLSSA*CSSSST
Trigger: GGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCT...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCACGTCGGCTTCAGCCTaGGCGGCGGCCTCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPTSASA*AAASSA
Trigger: CGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACGT...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267996.11
CDS-3UTR CAA 90 bp GTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGTCGGCTTCAGCCTaGGCGGCGGCCTCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: VSWRIDKCRAQRGGTSSSTSASA*AAASSA
Trigger: CGCCGAAGAGGCCGCCGCCAAGGCTGAAGCCGACGT...CGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS GCA 90 bp AAACAGGTAATGTGCAGCTGCCAGAAGGTCATGCTGTTTAGTCACTaGTCTGCAGCACCCCATTCGTGGCCTCCTGGCGCCGGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: KQVMCSCQKVMLFSH*SAAPHSWPPGAGPA
Trigger: AGCGGGCCCGGCGCCAGGAGGCCACGAATGGGGTGCTGCAGAGCAGTGACTAAACAGCATGACCTTCTGGCAGCTGCACATTACCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS GCA 90 bp TCAGCGGGCTCAAGTCCACTACTTGGGGACACAGAAGAACGCCACTaGTGGCCTGGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCTT +
Preference number: 5 (lower is better)
Translates to: SAGSSPLLGDTEERH*WPGFRAVASIPPHL
Trigger: AAGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAGCCCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 90 bp GCGGGCTCAAGTCCACTACTTGGGGACACAGAAGAACGCCACTGCTaGCCTGGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCTTTGT +
Preference number: 5 (lower is better)
Translates to: AGSSPLLGDTEERHC*PGFRAVASIPPHLC
Trigger: ACAAAGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS-3UTR CAA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGTCTTCCGCCGCCTTCTaGTCGGCCTCCGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SVCLALRQDAKRENQGQLSSAAF*SASACS
Trigger: TGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGA...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCTCCTCCTCGAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGGA...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTCGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AARVPIRKEWKSRKSSVARSNFS*AAMSSS
Trigger: CGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCG...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGGCTGTCCTCCGCCTaGTGCAGCTCCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYRLSSA*CSSSST
Trigger: GGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCT...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGTCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: DKCRAQRGGTSSSTRESWSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...CCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS GCA 90 bp CTGCGCCCGGCCCACTTCCGTAGAGTTCAACACCCTGGCTTTACTTaGCTGTTAAACAAGAGCGTCATCACGGCCACCTCACTCACTGGG +
Preference number: 5 (lower is better)
Translates to: LRPAHFRRVQHPGFT*LLNKSVITATSLTG
Trigger: CCCAGTGAGTGAGGTGGCCGTGATGACGCTCTTGTTTAACAGGCAAGTAAAGCCAGGGTGTTGAACTCTACGGAAGTGGGCCGGGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS GCA 90 bp CGGGAATCAAGACTGTACATTGCTCCCTGGCTTCCTGAAGGCCACTaGTGGGTGTCCACAAGGCTTTGGGCCCCAGGATCTGACCTCTTC +
Preference number: 5 (lower is better)
Translates to: RESRLYIAPWLPEGH*WVSTRLWAPGSDLF
Trigger: GAAGAGGTCAGATCCTGGGGCCCAAAGCCTTGTGGACACCCAGCAGTGGCCTTCAGGAAGCCAGGGAGCAATGTACAGTCTTGATTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGTCTTCCGCCGCCTTCTaGTCGGCCTCCGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQSSAAF*SASACS
Trigger: TGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGA...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGACGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGRSNFS*AAMSSS
Trigger: CGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCG...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGACGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGRSNFS*AAMSSS
Trigger: CGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCG...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561266.6
CDS-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGAGCTCATCTTCCAGCTaGGCGGCGGCCTCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQSSSSS*AAASSA
Trigger: CGCCGAAGAGGCCGCCGCCAAGCTGGAAGATGAGCT...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357980.9
CDS-3UTR CAA 90 bp TCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTGCAGGTGTCCAAGTTGGTCCTTTGGCTaGACTTTCCGAGGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SEAASNALGHGRAVCRCPSWSFG*TFRGRR
Trigger: TCTTCTGCCTCGGAAAGTCAAGCCAAAGGACCAACT...TGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGGTCCTGCTGGAGAATTaGCGGGAGGCAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWVLLEN*REAGIF
Trigger: GAAGATGCCTGCCTCCCGCAAATTCTCCAGCAGGAC...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS GCA 90 bp CAGTCAGAGGCGGCATCCAATGCTCTGGGCCATGGCAGGGCTGTGTaGAGGTGTCCAGCAGGAAAAGGTAAACTTCCTTCATTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QSEAASNALGHGRAV*RCPAGKGKLPSLLS
Trigger: GGAGAGCAATGAAGGAAGTTTACCTTTTCCTGCTGGACACCTGCACACAGCCCTGCCATGGCCCAGAGCATTGGATGCCGCCTCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS CCA 90 bp AAAGCAGATGGCCTCACTCGGGAATCAAGACTGTACATTGCTCCCTaGCTTCCTGAAGGCCACTGCTGGGTGTCCACAAGGCTTTGGGCC +
Preference number: 5 (lower is better)
Translates to: KADGLTRESRLYIAP*LPEGHCWVSTRLWA
Trigger: GGCCCAAAGCCTTGTGGACACCCAGCAGTGGCCTTCAGGAAGCCAGGGAGCAATGTACAGTCTTGATTCCCGAGTGAGGCCATCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS-3UTR CAA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAATCTTCCGCCGCCTTCTaGTCGGCCTCCGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: ALRQDAKRENQGQLENRQSSAAF*SASACS
Trigger: TGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGA...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGATCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: NAELREVGHPARRGSLGRSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...TCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCATCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp AAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTTCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: KHSVCLALRQDAKRENQGSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...ACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS CCA 90 bp CTCAAGTCCACTACTTGGGGACACAGAAGAACGCCACTGCTGGCCTaGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCTTTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: LKSTTWGHRRTPLLA*LSGCSLHSAPSLFL
Trigger: TAAGAACAAAGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 90 bp CAGCTCGTCTATGACCAGGAAGTGGAAGGCAGAGGTGCAAGAACATaGAGAGTGATCAAGAAATGGAGGGTGAGTGAGGGTGGTGCGCGC +
Preference number: 5 (lower is better)
Translates to: QLVYDQEVEGRGART*RVIKKWRVSEGGAR
Trigger: GCGCGCACCACCCTCACTCACCCTCCATTTCTTGATCACTCTCCATGTTCTTGCACCTCTGCCTTCCACTTCCTGGTCATAGACGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560131.1
CDS-3UTR CAA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTCCTCCTCGAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGGA...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358278.7
ENST00000558347.5
CDS CCA 90 bp CAGAACCTTCTCAACACCACCCGTTTCCCCTGGGAGCGTTTACTTTaGATCAGCGAGATGGAAAACAAAGGCTCAGGAGAACAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: QNLLNTTRFPWERLL*ISEMENKGSGEQAG
Trigger: CCCGGCCTGTTCTCCTGAGCCTTTGTTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCAGGGGAAACGGGTGGTGTTGAGAAGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CAA 90 bp TGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: CRAQRGGTSSSTRESWEKSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCACGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: AWVLASCRWELLALFPRGSSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp GCTTGGGTCCTTGCATCCTGTAGGTGGGAGCTTCTCGCTTTGTTTCCCCGCGGTTTCTCTACACAAACCTaGGTGATGACACCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: AWVLASCRWELLALFPRGFSTQT*VMTPQG
Trigger: CCCTTGAGGTGTCATCACCAAGGTTTGTGTAGAGAA...ACCGCGGGGAAACAAAGCGAGAAGCTCCCACCTACAGGATGCAAGGACCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp CAGACTGCAGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATGTGGGCCTCCAACATaGAGAATGGGGGAACCGGGT +
Preference number: 5 (lower is better)
Translates to: QTADPSKYHLPRQILRGGCGPPT*RMGEPG
Trigger: ACCCGGTTCCCCCATTCTCAATGTTGGAGGCCCACA...TCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCTGCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCTCCCAGCTTGGGTCCTaGCATCCTGTAGGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSSQLGS*HPVGGS
Trigger: GCTCCCACCTACAGGATGCAAGGACCCAAGCTGGGA...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp ATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAAGGCTGTCCTCCGCCTaGTGCAGCTCCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: IPTLTKHTVLLNSLQSVARLSSA*CSSSST
Trigger: GGTGCTGGAGGAGCTGCACAAGGCGGAGGACAGCCT...TGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp GCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAAGTTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: AELREVGHPARRGSLGRSLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...ACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KCRAQRGGTSSSTRESWESSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...CTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAATCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: MQSSERWDIQLDEGVLGESSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp ATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGAGAATTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: MQSSERWDIQLDEGVLGEFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...TTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp TTCTCGCTTTGTTTCCCCGCGGTTCATCTGGTCAGGTGGGGAGGTTACAGCTGGTTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: FSLCFPAVHLVRWGGYSWFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...CCAGCTGTAACCTCCCCACCTGACCAGATGAACCGCGGGGAAACAAAGCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp GAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCCAAGCTGGATGGCATTaGCCACTATGGCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EVKLDGICHYGWWLTSHLQAGWH*PLWLVA
Trigger: AGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTG...GAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATCAGTGCCTCTCCCACTaGACCTGTCGGCGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: NYSSHIEKQAGKASLSANQCLSH*TCRRPF
Trigger: GAAGGGGCGCCGACAGGTCAAGTGGGAGAGGCACTG...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS GCA 90 bp TCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCTTCCAGCTTGGCGGCGGCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SEYLSSSSSVPLSFF*SDTSSSSSLAAASS
Trigger: CGAAGAGGCCGCCGCCAAGCTGGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357980.9
CDS GCA 90 bp AATGAGCACAAAAGGAGCCCGGAGCTGAAACAGGTAATGTGCAGCTaGCAGAAGGTCATGCTGTTTAGTCACTGCTCTGCAGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: NEHKRSPELKQVMCS*QKVMLFSHCSAAPH
Trigger: ATGGGGTGCTGCAGAGCAGTGACTAAACAGCATGACCTTCTGGCAGCTGCACATTACCTGTTTCAGCTCCGGGCTCCTTTTGTGCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTTCTTCCGCCGCCTTCTaGTCGGCCTCCGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTSSAAF*SASACS
Trigger: TGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGA...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: AARVPIRKEWKSRKSSVASSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558544.5
CDS-3UTR CAA 90 bp AGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: RQMQSSERWDIQLDEGVLSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GGTAGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAGTGAGGCGGCGATTTaGCTCAAGTTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: GRTVLDFLHMGSTPRIQPSEAAI*LKLLVE
Trigger: CTCTACCAGCAACTTGAGCAAAATCGCCGCCTCACT...GGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCTGGGAGCTTCTCGCTTaGTTTCCCCGCGGTTCATCT +
Preference number: 5 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSWELLA*FPRGSS
Trigger: AGATGAACCGCGGGGAAACAAAGCGAGAAGCTCCCA...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS TCA 90 bp ACACGAGTCCTCCATGTTCCATACTCGTGGCTCATCCACATCAAATaGGCACAAAAGGAGCCCGGAGCTGAAACAGGTAATGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TRVLHVPYSWLIHIK*AQKEPGAETGNVQL
Trigger: CAGCTGCACATTACCTGTTTCAGCTCCGGGCTCCTTTTGTGCTCATTTGATGTGGATGAGCCACGAGTATGGAACATGGAGGACTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651344.1
CDS CCA 90 bp GGAACTCTGCTTCTCAAAACCACCCATTTCTGCCAACAAAGCAGATaGCCTCACTCGGGAATCAAGACTGTACATTGCTCCCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GTLLLKTTHFCQQSR*PHSGIKTVHCSLAS
Trigger: GGAAGCCAGGGAGCAATGTACAGTCTTGATTCCCGAGTGAGGCCATCTGCTTTGTTGGCAGAAATGGGTGGTTTTGAGAAGCAGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS-3UTR CAA 90 bp ACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATCCTCCTCGAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: TNPHLIVFPTLTFLLTLSSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTCGAGGAGGA...TGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: NRQMQSSERWDIQLDEGVSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...GACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558544.5
CDS-3UTR CAA 90 bp GAGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: ENQGQLENRQMQSSERWDSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...GTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
CDS-3UTR CAA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: NEELLYNRKHSVCLALRQSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR CAA 90 bp GCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: AARVPIRKEWKSRKSSVALSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...AGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCACGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAAREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: KSSVAYRPLALVNSGMRDVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...ATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTACACTATCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SKYHLPRQILRGGLRLTLSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...TAGTGTAAGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RIDKCRAQRGGTSSSTRESSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGTTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGATTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp AGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCAAGCTCGGCACATTaGCTCTTTCAGTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: RIDKCRAQRGGTSSSTRESSSAH*LFQLDL
Trigger: GAGATCCAACTGAAAGAGCAAATGTGCCGAGCTTGA...CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561395.5
CDS-3UTR CAA 90 bp GTGAAGTTCACCTCCAGAGTCCAATTTCAGCTGCTCTATTCTCCCAGCCTCTCAGGTAAACTTCCTTCATaGCTCTCCAGCCCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: VKFTSRVQFQLLYSPSLSGKLPS*LSSPVV
Trigger: CACCACAGGGCTGGAGAGCAATGAAGGAAGTTTACC...TGAGAGGCTGGGAGAATAGAGCAGCTGAAATTGGACTCTGGAGGTGAACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGTCTTCCGCCGCCTTCTaGTCGGCCTCCGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLSSAAF*SASACS
Trigger: TGAGCAGGCGGAGGCCGACAAGAAGGCGGCGGAAGA...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CAA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp TGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: WRIDKCRAQRGGTSSSTRLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCCGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: WKSTLIVILQIVMSCTCAREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQSSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDSSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: VMSCTCANQKGMEVSEEQRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...CTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp AGAACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACAAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: RTRVSWRIDKCRAQRGGTRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...TGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAAGTGAGGCGGCGATTTaGCTCAAGTTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRSEAAI*LKLLVE
Trigger: CTCTACCAGCAACTTGAGCAAAATCGCCGCCTCACT...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR CAA 90 bp CTGGACACTGGCAAGTGCCATAAGCAGCCAACTAGTGACTTAATGTCCTGGGAATCTTTACAGCCTTCTTaGGTGTCAGACCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LDTGKCHKQPTSDLMSWESLQPS*VSDQPL
Trigger: CAGAGGCTGGTCTGACACCAAAGAAGGCTGTAAAGA...TTCCCAGGACATTAAGTCACTAGTTGGCTGCTTATGGCACTTGCCAGTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS GCA 90 bp TCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTTGAGTTTCTTTTaGAGTGACACCAGCTCATCTTCCAGCTGCTTGCTCCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SEYLSSSSSVPLSFF*SDTSSSSSCLLLSS
Trigger: GGAAGACAGGAGCAAGCAGCTGGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288398.10
ENST00000358278.7
ENST00000403994.9
ENST00000558347.5
ENST00000559556.5
ENST00000560970.6
ENST00000610733.1
ENST00000651344.1
CDS-3UTR CAA 90 bp ATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: ICHYGWWLTSHLVSRRLRSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCATCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CAA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGTCAAGCTCGGCACATTaGCCTTCTGAGAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FDTETKSFCTIESTVCAWSSSAH*PSESSA
Trigger: GGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGA...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000651590.1
CDS-3UTR CAA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGCCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 5 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCATCAACCCGGGAAATGGCACATTTGAACCAGGATCGCCCTGACATGGGCTTGAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 5 (lower is better)
Translates to: ASTREMAHLNQDRPDMGLNVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...CAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AAGGTAATACGATTCCACCTCAGGAAGCTGACTTCTCCCTTACCGGACTTCTCCAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: KVIRFHLRKLTSPLPDFSRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...GGAGAAGTCCGGTAAGGGAGAAGTCAGCTTCCTGAGGTGGAATCGTATTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp ACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGGGTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TNAELREVGHPARRGSLGLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...CCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp GGTAGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCGCGATTTTGCTCAAGTaGCTGGTAGAGTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: GRTVLDFLHMGSTPRIQPAILLK*LVELIF
Trigger: GAAGATCAACTCTACCAGCAACTTGAGCAAAATCGC...GGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CAA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGAGTGAGGCGGCGATTTaGCTCAAGTTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQSEAAI*LKLLVE
Trigger: CTCTACCAGCAACTTGAGCAAAATCGCCGCCTCACT...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CAA 90 bp CAGACTGCAGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGACTGCATAATGATGTTTaGGTCAATGAGGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: QTADPSKYHLPRQILRGGLHNDV*VNEGLH
Trigger: ATGCAGCCCCTCATTGACCAAAACATCATTATGCAG...TCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCTGCAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp CAGACTGCAGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGAATAAAGAAAACATGCTaGACAACCCTCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QTADPSKYHLPRQILRGGIKKTC*TTLSSS
Trigger: GGAGGAGGAGAGGGTTGTCAAGCATGTTTTCTTTAT...TCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCTGCAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS CCA 90 bp AATGAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTaGCTAACTAGTCACCTCGTGAGCAGAAGACTTAGGTTCATGAGT +
Preference number: 5 (lower is better)
Translates to: NEHEVKLDGICHYGW*LTSHLVSRRLRFMS
Trigger: ACTCATGAACCTAAGTCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp ACCAGGGTCAGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: TRVSWRIDKCRAQRGGTSSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...GGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp GAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGATCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: ENRQMQSSERWDIQLDEGSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...TCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp GCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGGAGAATAGACAATTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: ALRQDAKRENQGQLENRQLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...TTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp CATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: HEVKLDGICHYGWWLTSHLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp AGGACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: RTVLDFLHMGSTPRIQPKLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGCGGGAAATGGCACATTaGAACCAGGATCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLREMAH*NQDRPD
Trigger: GTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCG...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACCCACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: VPIRKEWKSRKSSVAYRPTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...GGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCCCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 5 (lower is better)
Translates to: WKSTLIVILQIVMSCTCAPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: NEELLYNRKHSVCLALRQRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000560970.6
CDS-3UTR CAA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCATTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAAFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp AGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGAGGGAGTCTTGTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RQMQSSERWDIQLDEGVLLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...CAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp AGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTCAGCTGTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SVCLALRQDAKRENQGQLLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...CAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp CAGACTGCAGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGACACACATTCTTGGAATaGTTACCAACTTCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: QTADPSKYHLPRQILRGGHTFLE*LPTSQG
Trigger: TCCTTGGGAAGTTGGTAACAATTCCAAGAATGTGTG...TCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCTGCAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS TCA 90 bp GCTGGGACTGCAATGCTGATTTCAGATAGGAAGACTGTCTTGTGGTaGGCTACCTTTAAGTGCATTACAAGCCCTCATCAACTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: AGTAMLISDRKTVLW*ATFKCITSPHQLWS
Trigger: ACTCCAGAGTTGATGAGGGCTTGTAATGCACTTAAAGGTAGCTCACCACAAGACAGTCTTCCTATCTGAAATCAGCATTGCAGTCCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS TCA 90 bp GAAAGTGAGGGTGGTAGCTTCAGGAAATGGCTGGGACTGCAATGCTaGTTTCAGATAGGAAGACTGTCTTGTGGTGAGCTACCTTTAAGT +
Preference number: 5 (lower is better)
Translates to: ESEGGSFRKWLGLQC*FQIGRLSCGELPLS
Trigger: ACTTAAAGGTAGCTCACCACAAGACAGTCTTCCTATCTGAAATCAGCATTGCAGTCCCAGCCATTTCCTGAAGCTACCACCCTCACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS CCA 90 bp TTAGAAAGAGCATTCCAGATGTCAGGCTGCAGCTCAATCTACTCATaGCTTCTCATGCAAAGAACTCGCCAGCTCAGCCAACAGATGTTA +
Preference number: 5 (lower is better)
Translates to: LERAFQMSGCSSIYS*LLMQRTRQLSQQML
Trigger: TAACATCTGTTGGCTGAGCTGGCGAGTTCTTTGCATGAGAAGCCATGAGTAGATTGAGCTGCAGCCTGACATCTGGAATGCTCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558072.5
ENST00000559108.1
ENST00000560975.5
CDS-3UTR CAA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGATTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: NEELLYNRKHSVCLALRQLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp GTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: VCQSERNGSLGRAAWLTDTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...GTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQTKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 5 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 5 (lower is better)
Translates to: ARVPIRKEWKSRKSSVAYGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...GTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GAAGAGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGAGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 5 (lower is better)
Translates to: EEQRGLQTLGFSEFRHAGGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...TCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AGCAGCGTGGCTTACAGACCCTTGGCTTTAGTGAATTCAGGCATGCGGGATCCAGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 5 (lower is better)
Translates to: SSVAYRPLALVNSGMRDPGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...TGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp ACGTGTGCCAATCAGAAAGGAATGGAAGTCTCGGAAGAGCAGCGTGGCTTACAGAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 5 (lower is better)
Translates to: TCANQKGMEVSEEQRGLQNVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...CTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GCAAACAGAAATAGCTTACACAGTGTTTATTTGACACTGAAACGAAGAGCTTCTTCATCTTCCAGCTGCTaGCTCCTGTCTTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ANRNSLHSVYLTLKRRASSSSSC*LLSSAA
Trigger: GGCGGCGGAAGACAGGAGCAAGCAGCTGGAAGATGA...AGAAGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAAGCTATTTCTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403994.9
CDS-3UTR CAA 90 bp GGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACAAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: GGPFVQSSTNPHLIVFPTRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...TGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp AAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGAGAGAACCAGGGTTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: KHSVCLALRQDAKRENQGLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...ACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp AGCTGGAGAATAGACAAATGCAGAGCTCAGAGAGGTGGGACATCCAGCTCGACGACTGTTAAAGCTGTATaGGATCATGCCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: SWRIDKCRAQRGGTSSSTTVKAV*DHANFL
Trigger: AAGGAAATTGGCATGATCCAATACAGCTTTAACAGT...CGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651622.1
CDS-3UTR CAA 90 bp CTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGGCGATTTTGCTCAAGTaGCTGGTAGAGTTGATACAG +
Preference number: 5 (lower is better)
Translates to: LLYNRKHSVCLALRQDAKAILLK*LVELIQ
Trigger: CTGTATCAACTCTACCAGCAACTTGAGCAAAATCGC...CTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS-3UTR CAA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTCTGGGAGCGTTTACTTaGGATCAGCGAGATGGAAAA +
Preference number: 5 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFLGAFT*DQRDGK
Trigger: TTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCAG...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS TCA 90 bp AGGACCAAGGGAAAGCACTTAAGGCAAGATATAAATAGCAGAGGGTaGAGTGAAGGTGCAGTCGTTATACCAAACGAACCAGGAGGCATT +
Preference number: 5 (lower is better)
Translates to: RTKGKHLRQDINSRG*SEGAVVIPNEPGGI
Trigger: AATGCCTCCTGGTTCGTTTGGTATAACGACTGCACCTTCACTTCACCCTCTGCTATTTATATCTTGCCTTAAGTGCTTTCCCTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS CCA 90 bp CGTTATACCAAACGAACCAGGAGGCATTGGAAGCTGAAAGATGTCTaGGTTGCAGTTAAACCTAAAAACCACACGAGCCATCAGTACCTT +
Preference number: 5 (lower is better)
Translates to: RYTKRTRRHWKLKDV*VAVKPKNHTSHQYL
Trigger: AAGGTACTGATGGCTCGTGTGGTTTTTAGGTTTAACTGCAACCCAGACATCTTTCAGCTTCCAATGCCTCCTGGTTCGTTTGGTATAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS-3UTR CAA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 5 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp TCTGATCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTGGCCTTCTGAGACCACAGGGGGACCTTTaGTTCAAAGTAGCACCAATC +
Preference number: 5 (lower is better)
Translates to: SDPLFLIVLPAVGLGLLRPQGDL*FKVAPI
Trigger: GATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGG...TCTCAGAAGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558544.5
CDS-3UTR CAA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACGTGGCTTACAGACCCTaGGCTTTAGTGAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHVAYRP*ALVNSG
Trigger: GCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCAC...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp CCAGACTCCAACAGCACCATTAGACTGAGTAAAGCATACCTTTCAGACAACCAGGCGATTTTGCTCAAGTaGCTGGTAGAGTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: PDSNSTIRLSKAYLSDNQAILLK*LVELIF
Trigger: GAAGATCAACTCTACCAGCAACTTGAGCAAAATCGC...CTGGTTGTCTGAAAGGTATGCTTTACTCAGTCTAATGGTGCTGTTGGAGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CAA 90 bp GATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACCTCGTGAGCAGAAGAAATTGTTTTGCCAGGTaGGTATTCAACCATAAGGAT +
Preference number: 5 (lower is better)
Translates to: DGICHYGWWLTSHLVSRRNCFAR*VFNHKD
Trigger: ATCCTTATGGTTGAATACCAACCTGGCAAAACAATT...TCTTCTGCTCACGAGGTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp AAACCACCGCAGATACAGTCTCCACCGATTTCCCCCTTGAGCTGTATTCTTAAAGGTGCTCACACATTCTaGGAATTGTTACCAACTTCC +
Preference number: 5 (lower is better)
Translates to: KPPQIQSPPISPLSCILKGAHTF*ELLPTS
Trigger: GGAAGTTGGTAACAATTCCAAGAATGTGTGAGCACC...TTTAAGAATACAGCTCAAGGGGGAAATCGGTGGAGACTGTATCTGCGGTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS TCA 90 bp CGGCACATTTGCTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: RHICLSSAAINAFKV*SIILNCSSSCRTWP
Trigger: AGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGCAAATGTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558264.5
ENST00000559831.5
ENST00000644204.1
CDS TCA 90 bp GCCATCAGTACCTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AISTLSSAAINAFKV*SIILNCSSSCRTWP
Trigger: AGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGGTACTGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS TCA 90 bp CGGCACATTTGCTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: RHICLSSAAINAFKV*SIILNCSSSCRTWL
Trigger: CAGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGCAAATGTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651344.1
CDS-3UTR CAA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558544.5
CDS-3UTR CAA 90 bp TTAGTGAGGATTCCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAATCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: LVRIPTLTKHTVLLNSLQSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...TTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558544.5
CDS-3UTR CAA 90 bp CTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGGATGCTAAGAGATCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: LYNRKHSVCLALRQDAKRSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...TCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp AACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGCTCTAAGGCAGTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: NEELLYNRKHSVCLALRQSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...CTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp ACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: TDCYPTDCHELHVCQSERLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: FDTETKSFCTIESTVCAWLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
ENST00000651590.1
CDS-3UTR CAA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp CCTACGCTGACTAAGCACACTGTGTTGCTAAACTCTCTACAAAGTGTGGCAGCAACTAAGCACACTGTGTaGCTAAACTCTCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: PTLTKHTVLLNSLQSVAATKHTV*LNSLQS
Trigger: ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGT...TGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AAGACCACAGGGGGACCTTTTGTTCAAAGTAGCACCAATCCACACCTGATTGTGTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: KTTGGPFVQSSTNPHLIVSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...CACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTSSSVP*SFFCSD
Trigger: GTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGA...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GCGAGTACTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTGATCCATTATTCAGAGCCTCAGAGTATTaGTCCAGTTCATCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: ASTYPLQPLMLSRSDPLFRASEY*SSSSSV
Trigger: CACCGAAGATGAACTGGACAAATACTCTGAGGCTCT...GAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558347.5
CDS-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTTTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGTTCTCCTGGGCATCTTaGAGAGCCTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLFSWAS*RASEYL
Trigger: CAAATACTCTGAGGCTCTCAAAGATGCCCAGGAGAA...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
CDS-3UTR CAA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCGCGATTTTGCTCAAGTaGCTGGTAGAGTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSAILLK*LVELIF
Trigger: GAAGATCAACTCTACCAGCAACTTGAGCAAAATCGC...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGAGTGAGGCGGCGATTTaGCTCAAGTTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: YLSVQTRGPAISRSSAELSEAAI*LKLLVE
Trigger: CTCTACCAGCAACTTGAGCAAAATCGCCGCCTCACT...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp CATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTAGGACAGTCAGTGAGGCGGCGATTTaGCTCAAGTTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: HFCRKQLFSTLLVEGRTVSEAAI*LKLLVE
Trigger: CTCTACCAGCAACTTGAGCAAAATCGCCGCCTCACT...GACTGTCCTACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp ACAGTCTTAGATTTTCTGCACATGGGCTCCACGCCTAGAATTCAGCCCAAGTTTCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TVLDFLHMGSTPRIQPKFLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...AAACTTGGGCTGAATTCTAGGCGTGGAGCCCATGTGCAGAAAATCTAAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp GAGCATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTAATTGGAAAATTGTTTaGCCAGGTTGGTATTCAACC +
Preference number: 5 (lower is better)
Translates to: EHEVKLDGICHYGWWLTSNWKIV*PGWYST
Trigger: GGTTGAATACCAACCTGGCAAAACAATTTTCCAATT...ACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp CATGAAGTCAAGCTGGATGGCATTTGCCACTATGGCTGGTGGCTAACTAGTCACTCAATGTGGATGCCCTaGAATTGGAAAATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: HEVKLDGICHYGWWLTSHSMWMP*NWKIVL
Trigger: CAAAACAATTTTCCAATTCAAGGGCATCCACATTGA...GTGACTAGTTAGCCACCAGCCATAGTGGCAAATGCCATCCAGCTTGACTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS CCA 90 bp AGGACACACAGGAAGAATGTGCAAGTGCAAAGGAGCGTATCAATGTaGATGCCCTTGAATTGGAAAATTGTTTTGCCAGGTTGGTATTCA +
Preference number: 5 (lower is better)
Translates to: RTHRKNVQVQRSVSM*MPLNWKIVLPGWYS
Trigger: TGAATACCAACCTGGCAAAACAATTTTCCAATTCAAGGGCATCCACATTGATACGCTCCTTTGCACTTGCACATTCTTCCTGTGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS-3UTR CAA 90 bp CCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: PHYLSVQTRGPAISRSSASSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...AGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCCTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: WKSTLIVILQIVMSCTCASSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...GGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267996.11
ENST00000357980.9
CDS-3UTR CAA 90 bp ATCCTACAGATTGTCATGAGCTGCACGTGTGCCAATCAGAAAGGAATGGAAGTCTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ILQIVMSCTCANQKGMEVSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...GACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GTGGAAATCCACACTGATTGTTATCCTACAGATTGTCATGAGCTGCACGTGTGCAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 5 (lower is better)
Translates to: VEIHTDCYPTDCHELHVCNVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...GCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp AGACCCAAGCAAGTATCATCTTCCCAGGCAGATCTTAAGGGGTGGATTAAGGCTTTTTTCTCCTCAGGTTaGTCACAGAAAGCTCTTAAA +
Preference number: 5 (lower is better)
Translates to: RPKQVSSSQADLKGWIKAFFSSG*SQKALK
Trigger: TTTAAGAGCTTTCTGTGACAAACCTGAGGAGAAAAA...AGCCTTAATCCACCCCTTAAGATCTGCCTGGGAAGATGATACTTGCTTGGGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: YLSVQTRGPAISRSSAELSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp AATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAGCCAATTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: NYSSHIEKQAGKASLSANSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...ATTGGCTGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp GGGGCTCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: GAPHYLSVQTRGPAISRSSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...GCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp AATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGCGCCCTGACATGGGCTaGCCTTTTTGTATGTGTTTT +
Preference number: 5 (lower is better)
Translates to: NPHLIVFPTLTFLLTLSLRPDMG*PFCMCF
Trigger: AAAACACATACAAAAAGGCAAGCCCATGTCAGGGCG...CAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp GAACGTAATTATTCCAGCCATATAGAGAAACAAGCAGGCAAGGCCAGCCTTTCAAAATCCTGTTCGTGTTaGCTGGATACATTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: ERNYSSHIEKQAGKASLSKSCSC*LDTFAL
Trigger: TAAGGCAAATGTATCCAGCAAACACGAACAGGATTT...TGAAAGGCTGGCCTTGCCTGCTTGTTTCTCTATATGGCTGGAATAATTACGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CAA 90 bp AAACATCAATCACAAACACAGGATGAGATGATTAGAACTAGGCATGCTTGTAAGTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: KHQSQTQDEMIRTRHACKSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...CTTACAAGCATGCCTAGTTCTAATCATCTCATCCTGTGTTTGTGATTGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CAA 90 bp CAAAGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGTCTATCATTGGCACTTaGAATGGAACTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: QSSTNPHLIVFPTLTFLLSIIGT*NGTSSA
Trigger: AGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGA...CAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp CCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTCTATCATTGGCAACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 5 (lower is better)
Translates to: PHLIVFPTLTFLLTLSLATLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...TGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTACATTAACCTTCCTGTaGACTCTATCATTGGCACTT +
Preference number: 5 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTTLTFL*TLSLAL
Trigger: AAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGT...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp AGTAGCACCAATCCACACCTGATTGTGTTTCCAACATTAACCTTCCTGTTGACTAACGTCCTTTACCAGTaGTATGTGGTGTCTAAATCT +
Preference number: 5 (lower is better)
Translates to: SSTNPHLIVFPTLTFLLTNVLYQ*YVVSKS
Trigger: AGATTTAGACACCACATACAACTGGTAAAGGACGTT...AGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp TTTGACACTGAAACGAAGAGCTTCTGTACAATAGAAAGCACAGTGTGTGCCTGGTTACACAGTGTTTATTaGACACTGAAACGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FDTETKSFCTIESTVCAWLHSVY*TLKRRA
Trigger: AGCTCTTCGTTTCAGTGTCAAATAAACACTGTGTAA...CCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288398.10
ENST00000403994.9
ENST00000559281.6
ENST00000560970.6
ENST00000561266.6
ENST00000561395.5
CDS-3UTR CAA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCCTTTCAGCCAATTCCTaGCATTTGCATTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCLSANS*HLHFCR
Trigger: TCTGCAGAAATGCAAATGCAAGGAATTGGCTGAAAG...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TTCCCAAAAGGACAGTGCTCAAGGTCACTCATTCTAGTTCACTGCTCTAGTTCAACTCCCAAGCTCACATaGTACAATCTGTGTTTAATT +
Preference number: 5 (lower is better)
Translates to: FPKGQCSRSLILVHCSSSTPKLT*YNLCLI
Trigger: AATTAAACACAGATTGTACAATGTGAGCTTGGGAGT...TGAACTAGAGCAGTGAACTAGAATGAGTGACCTTGAGCACTGTCCTTTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CAA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTTCTTCAGCAATGTGCTaGGCCTCTTTCAGTTGGATC +
Preference number: 5 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLSSAMC*ASFSWI
Trigger: GATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGA...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CAA 90 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: EMIFCSTTVKAVLDHANFLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...GAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CAA 90 bp ACTTTGAATGGAACTTCTTCTGCTTTAGTGAGGATTCCTACGCTGACTAAGCACGGACAGAGTTCTACATaGTACAATGTTGAACAAAAG +
Preference number: 5 (lower is better)
Translates to: TLNGTSSALVRIPTLTKHGQSST*YNVEQK
Trigger: CTTTTGTTCAACATTGTACAATGTAGAACTCTGTCC...GTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000358278.7
ENST00000558347.5
ENST00000558544.5
CDS-3UTR CAA 90 bp ATTTACAAAGCACACCTGGATATACATCTCAAGCCTTTCATGCTACAAAAGACTCGGTGTGAAAAGAAGTaGGTCCTTTGGCTTGACTTT +
Preference number: 5 (lower is better)
Translates to: IYKAHLDIHLKPFMLQKTRCEKK*VLWLDF
Trigger: AAAGTCAAGCCAAAGGACCAACTTCTTTTCACACCG...AGTCTTTTGTAGCATGAAAGGCTTGAGATGTATATCCAGGTGTGCTTTGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS-3UTR CAA 90 bp TATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCTGAATTGTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: YLSVQTRGPAISRSSAELSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...CAATTCAGCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTTTGTCGGAAAGGACCTaGATCTCTTCCTCATATCTG +
Preference number: 5 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGLSERT*ISSSYL
Trigger: CAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAA...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000651577.1
ENST00000651590.1
ENST00000651704.1
CDS-3UTR CAA 90 bp TCCTCATTATTTATCAGTTCAAACAAGAGGACCTGCTATTTCAAGGAGCAGTGCAAGTTGCTGGTAGAGTaGATACAGTGTTTATTTGAC +
Preference number: 5 (lower is better)
Translates to: SSLFISSNKRTCYFKEQCKLLVE*IQCLFD
Trigger: GTCAAATAAACACTGTATCAACTCTACCAGCAACTT...GCACTGCTCCTTGAAATAGCAGGTCCTCTTGTTTGAACTGATAAATAATGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651590.1
CDS CCA 90 bp GGCACACTGCAATACATTCTCTGCTTTCTTGCCTATTGTTTTACATaGGATAACAACAAGATAACTTATCCACTTGGCACTTGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: GTLQYILCFLAYCFT*DNNKITYPLGTWFK
Trigger: TTTAAACCAAGTGCCAAGTGGATAAGTTATCTTGTTGTTATCCCATGTAAAACAATAGGCAAGAAAGCAGAGAATGTATTGCAGTGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS-3UTR CAA 90 bp GAGATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCTCCAGTGACTTCAAGTaGTTCGTCACAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: EMIFCSTTVKAVLDHANFSSDFK*FVTVFN
Trigger: ATTGAAAACTGTGACGAACAACTTGAAGTCACTGGA...GAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558910.3
CDS-3UTR CAA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTTTAAAAGTCTGGGAGTaGTGCGGTAACACAAACTCA +
Preference number: 5 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGLKVWE*CGNTNS
Trigger: TGAGTTTGTGTTACCGCACAACTCCCAGACTTTTAA...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS-3UTR CAA 90 bp TTGCATTTGCATTTCTGCAGAAAGCAACTGTTTTCAACTCTATTAGTTGAAGGTGACGGGTTAAGGGTTTaGCACTATAGTTTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LHLHFCRKQLFSTLLVEGDGLRV*HYSLAL
Trigger: AAGAGCTAAACTATAGTGCAAAACCCTTAACCCGTC...ACCTTCAACTAATAGAGTTGAAAACAGTTGCTTTCTGCAGAAATGCAAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS-3UTR CAA 90 bp ATGATCTTTTGTAGTACCACTGTTAAAGCTGTATTGGATCATGCCAATTTCCTTACTGTTAAAGCTGTATaGGATCATGCCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: MIFCSTTVKAVLDHANFLTVKAV*DHANFL
Trigger: AAGGAAATTGGCATGATCCAATACAGCTTTAACAGT...AAGGAAATTGGCATGATCCAATACAGCTTTAACAGTGGTACTACAAAAGATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558910.3
ENST00000651622.1
CDS GCA 72 bp GCGGGCGGGAGGGCTGCAGTGGGAGAGGCCGGCTGCTaGCCTGCGGACCCGGCTGCCGCGGCTGTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: AGGRAAVGEAGC*PADPAAAAVLA
Trigger: AGCCAGGACAGCCGCGGCAGCCGGGTCCGCAGGGCAGCAGCCGGCCTCTCCCACTGCAGCCCTCCCGCCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000404484.9
ENST00000558910.3
CDS GCA 72 bp GTCTCCCTCAGCTTCCTCTCGTGGTCCAGCTCGCGCTaGAGGGTGCCCGCGCGCTCCTCAGCGGCGTCCGCC +
Preference number: 6 (lower is better)
Translates to: VSLSFLSWSSSR*RVPARSSAASA
Trigger: GGCGGACGCCGCTGAGGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAGGGAGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000404484.9
ENST00000558544.5
ENST00000558868.5
ENST00000558910.3
ENST00000559281.6
ENST00000560959.5
ENST00000651590.1
CDS CCA 72 bp ACGTCGGCTTCAGCGGTCTCCCTCAGCTTCCTCTCGTaGTCCAGCTCGCGCTGCAGGGTGCCCGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: TSASAVSLSFLS*SSSRCRVPARS
Trigger: GGAGCGCGCGGGCACCCTGCAGCGCGAGCTGGACCACGAGAGGAAGCTGAGGGAGACCGCTGAAGCCGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317516.12
ENST00000334895.10
ENST00000404484.9
ENST00000558868.5
ENST00000558910.3
ENST00000559281.6
ENST00000560959.5
ENST00000651590.1
CDS TCA 72 bp TTCGTGGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTaGGAGCTCAGCCCGCTCCTCTGCACGTTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: FVASWRRARLPF*ELSPLLCTFQV
Trigger: GACCTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGGTAAGCGGGCCCGGCGCCAGGAGGCCACGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS CCA 72 bp CTTGCGTTTCCCTTCCTTCTTTCCAGACGCGCGCCCTaGCCGCCCTGGGTGGTGGTGGGGGTAGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: LAFPFLLSRRAP*PPWVVVGVGWW
Trigger: CCACCACCCTACCCCCACCACCACCCAGGGCGGCCAGGGCGCGCGTCTGGAAAGAAGGAAGGGAAACGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CAA 90 bp AGCACCCGGTCCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCGAGCTGCTTGCTCCTGTCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: STRSRSSSDTRSNFS*AAMSSSSCLLLSSA
Trigger: GGCGGAAGACAGGAGCAAGCAGCTCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGGACCGGGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000558314.5
ENST00000559397.6
ENST00000561266.6
CDS GCA 72 bp GAAAGAGAAAGAGTTAGCCATTCGTGCGCCACGCCGTaGCGCGCGCCCCGGGTACCTTGGCGGCGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: ERERVSHSCATP*RAPRVPWRRPL
Trigger: AAGAGGCCGCCGCCAAGGTACCCGGGGCGCGCGGCACGGCGTGGCGCACGAATGGCTAACTCTTTCTCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558314.5
CDS GCA 72 bp CTTCAGCCTGGTGAGCTGGGCGCTCCGGGAGGCCACTaGACTAGGGCTCTGGCTTCCACTTCTAGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: LQPGELGAPGGH*TRALASTSRAP
Trigger: AGGGGCCCTAGAAGTGGAAGCCAGAGCCCTAGTGCAGTGGCCTCCCGGAGCGCCCAGCTCACCAGGCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651704.1
CDS CCA 72 bp CCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCTTaGCCGCGATGTCCTCCTCGAGCTGCTTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PARPPTPAATSP*PRCPPRAACSC
Trigger: ACAGGAGCAAGCAGCTCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000558314.5
ENST00000559397.6
ENST00000561266.6
CDS CAA 72 bp TCCCGCTCGTCCTCCGACACCCGCAGCAACTTCTCCTaGGCCGCGATGTCCTCCTCGAGCTGCTTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SRSSSDTRSNFS*AAMSSSSCLLL
Trigger: CAGGAGCAAGCAGCTCGAGGAGGACATCGCGGCCAAGGAGAAGTTGCTGCGGGTGTCGGAGGACGAGCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267996.11
ENST00000357980.9
ENST00000558314.5
ENST00000559397.6
ENST00000561266.6
CDS GCA 72 bp GAGGGAGAGAGAGAAAGAGAAAGAGTTAGCCATTCGTaGGCCACGCCGTGCCGCGCGCCCCGGGTACCTTGG +
Preference number: 6 (lower is better)
Translates to: EGERERERVSHS*ATPCRAPRVPW
Trigger: CCAAGGTACCCGGGGCGCGCGGCACGGCGTGGCGCACGAATGGCTAACTCTTTCTCTTTCTCTCTCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558314.5
CDS CAA 90 bp GGGACGAGACTCCTGCCGAGGTCTCAGCGGGCTCAAGTCCACTACTaGGGGACACAGAAGAACGCCACTGCTGGCCTGGCTTTCGGGCTG +
Preference number: 6 (lower is better)
Translates to: GTRLLPRSQRAQVHY*GTQKNATAGLAFGL
Trigger: CAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAGTCTCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 72 bp ATGCTGTTTAGTCACTGCTCTGCAGCACCCCATTCGTaGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: MLFSHCSAAPHS*PPGAGPAYPSE
Trigger: CTCAGAAGGGTAAGCGGGCCCGGCGCCAGGAGGCCACGAATGGGGTGCTGCAGAGCAGTGACTAAACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558868.5
ENST00000651344.1
CDS CAA 72 bp CTCCTGCCGAGGTCTCAGCGGGCTCAAGTCCACTACTaGGGGACACAGAAGAACGCCACTGCTGGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LLPRSQRAQVHY*GTQKNATAGLA
Trigger: AGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGAGCCCGCTGAGACCTCGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 72 bp AGTCCACTACTTGGGGACACAGAAGAACGCCACTGCTaGCCTGGCTTTCGGGCTGTAGCCTCCATTCCGCCC +
Preference number: 6 (lower is better)
Translates to: SPLLGDTEERHC*PGFRAVASIPP
Trigger: GGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CCA 72 bp ACTACTTGGGGACACAGAAGAACGCCACTGCTGGCCTaGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCT +
Preference number: 6 (lower is better)
Translates to: TTWGHRRTPLLA*LSGCSLHSAPS
Trigger: AGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS TCA 72 bp GAGTGGCCACGCAGGCAAGAGGTGAGGGAAGCAGTGTaGGCGTGCACTTACATCGGTGGCCTTTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: EWPRRQEVREAV*ACTYIGGLFLC
Trigger: GCAGAGAAAAAGGCCACCGATGTAAGTGCACGCTCACACTGCTTCCCTCACCTCTTGCCTGCGTGGCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610733.1
CDS GCA 72 bp TCAAGTCCACTACTTGGGGACACAGAAGAACGCCACTaGTGGCCTGGCTTTCGGGCTGTAGCCTCCATTCCG +
Preference number: 6 (lower is better)
Translates to: SSPLLGDTEERH*WPGFRAVASIP
Trigger: CGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAGTGGCGTTCTTCTGTGTCCCCAAGTAGTGGACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS GCA 72 bp TCCACTCTCAGAGTAAAGCAAGCCAGCAGCGCAAAGTaGACCTCCCGGGGACGCACAGACACGACTGAAAGC +
Preference number: 6 (lower is better)
Translates to: STLRVKQASSAK*TSRGRTDTTES
Trigger: GCTTTCAGTCGTGTCTGTGCGTCCCCGGGAGGTGCACTTTGCGCTGCTGGCTTGCTTTACTCTGAGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CCA 72 bp GGCCTCACTCGGGAATCAAGACTGTACATTGCTCCCTaGCTTCCTGAAGGCCACTGCTGGGTGTCCACAAGG +
Preference number: 6 (lower is better)
Translates to: GLTRESRLYIAP*LPEGHCWVSTR
Trigger: CCTTGTGGACACCCAGCAGTGGCCTTCAGGAAGCCAGGGAGCAATGTACAGTCTTGATTCCCGAGTGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CAA 72 bp AACACAGCAGCAAGAAAAGGGCAATGCATGAAGGGGTaGGTGCCGCAGCAGGTGGCCAATGCAGGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: NTAARKGQCMKG*VPQQVANAGGV
Trigger: CACGCCTCCTGCATTGGCCACCTGCTGCGGCACCAACCCCTTCATGCATTGCCCTTTTCTTGCTGCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560131.1
CDS CAA 90 bp CTGCCAACAAAGCAGATGGCCTCACTCGGGAATCAAGACTGTACATaGCTCCCTGGCTTCCTGAAGGCCACTGCTGGGTGTCCACAAGGC +
Preference number: 6 (lower is better)
Translates to: LPTKQMASLGNQDCT*LPGFLKATAGCPQG
Trigger: GCCTTGTGGACACCCAGCAGTGGCCTTCAGGAAGCCAGGGAGCAATGTACAGTCTTGATTCCCGAGTGAGGCCATCTGCTTTGTTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CAA 90 bp CTGCTGGCCTGGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCTTaGTTCTTAGGTAACAACTCCAGGACTCCCTTCTCCTCCCCAAGT +
Preference number: 6 (lower is better)
Translates to: LLAWLSGCSLHSAPS*FLGNNSRTPFSSPS
Trigger: ACTTGGGGAGGAGAAGGGAGTCCTGGAGTTGTTACCTAAGAACAAAGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCAGGCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS TCA 72 bp CATCACGGCCACCTCACTCACTGGGGGCCTGAAGTGTaGACTGAGACAAGACTTACCCAGGCTCAGCCATGT +
Preference number: 6 (lower is better)
Translates to: HHGHLTHWGPEV*TETRLTQAQPC
Trigger: ACATGGCTGAGCCTGGGTAAGTCTTGTCTCAGTTCACACTTCAGGCCCCCAGTGAGTGAGGTGGCCGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS TCA 72 bp ACCATCCCAACACAGCAGCAAGAAAAGGGCAATGCATaGAGGGGTTGGTGCCGCAGCAGGTGGCCAATGCAG +
Preference number: 6 (lower is better)
Translates to: TIPTQQQEKGNA*RGWCRSRWPMQ
Trigger: CTGCATTGGCCACCTGCTGCGGCACCAACCCCTTCATGCATTGCCCTTTTCTTGCTGCTGTGTTGGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560131.1
CDS CAA 90 bp CCAGAACCTTCTCAACACCACCCGTTTCCCCTGGGAGCGTTTACTTaGGATCAGCGAGATGGAAAACAAAGGCTCAGGAGAACAGGCCGG +
Preference number: 6 (lower is better)
Translates to: PEPSQHHPFPLGAFT*DQRDGKQRLRRTGR
Trigger: CCGGCCTGTTCTCCTGAGCCTTTGTTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCAGGGGAAACGGGTGGTGTTGAGAAGGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CCA 72 bp TTTGTCCGGGTCTTTGTGGCTGGGGGAGAGGAGTTTTaGTCCTTCTTCGCAGTGCTACTGATTGGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: FVRVFVAGGEEF*SFFAVLLIGFL
Trigger: CAGGAAGCCAATCAGTAGCACTGCGAAGAAGGACCAAAACTCCTCTCCCCCAGCCACAAAGACCCGGACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CAA 72 bp TGGCTTTCGGGCTGTAGCCTCCATTCCGCCCCATCTTaGTTCTTAGGTAACAACTCCAGGACTCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WLSGCSLHSAPS*FLGNNSRTPFS
Trigger: GGAGAAGGGAGTCCTGGAGTTGTTACCTAAGAACAAAGATGGGGCGGAATGGAGGCTACAGCCCGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS GCA 72 bp GCCCACTTCCGTAGAGTTCAACACCCTGGCTTTACTTaGCTGTTAAACAAGAGCGTCATCACGGCCACCTCA +
Preference number: 6 (lower is better)
Translates to: AHFRRVQHPGFT*LLNKSVITATS
Trigger: TGAGGTGGCCGTGATGACGCTCTTGTTTAACAGGCAAGTAAAGCCAGGGTGTTGAACTCTACGGAAGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS CAA 72 bp TTTTGTCCGGGTCTTTGTGGCTGGGGGAGAGGAGTTTaGGTCCTTCTTCGCAGTGCTACTGATTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: FCPGLCGWGRGV*VLLRSATDWLP
Trigger: AGGAAGCCAATCAGTAGCACTGCGAAGAAGGACCAAAACTCCTCTCCCCCAGCCACAAAGACCCGGACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CAA 90 bp CCAAAGATCTTTTGTCCGGGTCTTTGTGGCTGGGGGAGAGGAGTTTaGGTCCTTCTTCGCAGTGCTACTGATTGGCTTCCTGATAAAGCC +
Preference number: 6 (lower is better)
Translates to: PKIFCPGLCGWGRGV*VLLRSATDWLPDKA
Trigger: GGCTTTATCAGGAAGCCAATCAGTAGCACTGCGAAGAAGGACCAAAACTCCTCTCCCCCAGCCACAAAGACCCGGACAAAAGATCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CCA 72 bp GCATTCCAGATGTCAGGCTGCAGCTCAATCTACTCATaGCTTCTCATGCAAAGAACTCGCCAGCTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: AFQMSGCSSIYS*LLMQRTRQLSQ
Trigger: TTGGCTGAGCTGGCGAGTTCTTTGCATGAGAAGCCATGAGTAGATTGAGCTGCAGCCTGACATCTGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558072.5
ENST00000559108.1
ENST00000560975.5
CDS CCA 72 bp ACGTCGGCTTCAGCAGAAAGACGACTGTTTATGCTTTaGGGAAAGAACCCTCTGGGTGACAGGTCTCTATCC +
Preference number: 6 (lower is better)
Translates to: TSASAERRLFML*GKNPLGDRSLS
Trigger: GGATAGAGACCTGTCACCCAGAGGGTTCTTTCCCCAAAGCATAAACAGTCGTCTTTCTGCTGAAGCCGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560679.1
CDS CCA 72 bp CTCAACACCACCCGTTTCCCCTGGGAGCGTTTACTTTaGATCAGCGAGATGGAAAACAAAGGCTCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: LNTTRFPWERLL*ISEMENKGSGE
Trigger: TTCTCCTGAGCCTTTGTTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCAGGGGAAACGGGTGGTGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CAA 72 bp TCTCAACACCACCCGTTTCCCCTGGGAGCGTTTACTTaGGATCAGCGAGATGGAAAACAAAGGCTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SQHHPFPLGAFT*DQRDGKQRLRR
Trigger: TCTCCTGAGCCTTTGTTTTCCATCTCGCTGATCCAAAGTAAACGCTCCCAGGGGAAACGGGTGGTGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CAA 90 bp TCTTTGAGAGCCTCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGACACCAGCTCATCTTCCAGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SLRASEYLSSSSSVP*SFFCSDTSSSSSLA
Trigger: CGCCAAGCTGGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGCTCTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357980.9
CDS TCA 72 bp GGTGGTAGCTTCAGGAAATGGCTGGGACTGCAATGCTaGTTTCAGATAGGAAGACTGTCTTGTGGTGAGCTA +
Preference number: 6 (lower is better)
Translates to: GGSFRKWLGLQC*FQIGRLSCGEL
Trigger: TAGCTCACCACAAGACAGTCTTCCTATCTGAAATCAGCATTGCAGTCCCAGCCATTTCCTGAAGCTACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558264.5
ENST00000558400.1
CDS CCA 72 bp CTTCTCAAAACCACCCATTTCTGCCAACAAAGCAGATaGCCTCACTCGGGAATCAAGACTGTACATTGCTCC +
Preference number: 6 (lower is better)
Translates to: LLKTTHFCQQSR*PHSGIKTVHCS
Trigger: GGAGCAATGTACAGTCTTGATTCCCGAGTGAGGCCATCTGCTTTGTTGGCAGAAATGGGTGGTTTTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558400.1
CDS CAA 72 bp GCCTCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGACACCAGCTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: ASEYLSSSSSVP*SFFCSDTSSSS
Trigger: GGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000288398.10
ENST00000357980.9
ENST00000358278.7
ENST00000403994.9
ENST00000558314.5
ENST00000558347.5
ENST00000559556.5
ENST00000560970.6
ENST00000610733.1
ENST00000644204.1
ENST00000651344.1
CDS CAA 72 bp CGTCTGTTCAGAGAAGCTACGTCGGCTTCAGCCCTTTaGCGCCAAGCATCAGTGTACTGTCTTTACATAGTA +
Preference number: 6 (lower is better)
Translates to: RLFREATSASAL*RQASVYCLYIV
Trigger: TACTATGTAAAGACAGTACACTGATGCTTGGCGCAAAAGGGCTGAAGCCGACGTAGCTTCTCTGAACAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CAA 90 bp TCTTTGAGAGCCTCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTaGAGTTTCTTTTGCAGTGACACCAGCTCATCTTCCAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SLRASEYLSSSSSVP*SFFCSDTSSSSSCL
Trigger: CAAGCAGCTGGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGCTCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288398.10
ENST00000358278.7
ENST00000403994.9
ENST00000558347.5
ENST00000559556.5
ENST00000560970.6
ENST00000610733.1
ENST00000651344.1
CDS CAA 90 bp AGCTGGATGCGTCTGTTCAGAGAAGCTACGTCGGCTTCAGCCCTTTaGCGCCAAGCATCAGTGTACTGTCTTTACATAGTAACTCCTTTA +
Preference number: 6 (lower is better)
Translates to: SWMRLFREATSASAL*RQASVYCLYIVTPL
Trigger: TAAAGGAGTTACTATGTAAAGACAGTACACTGATGCTTGGCGCAAAAGGGCTGAAGCCGACGTAGCTTCTCTGAACAGACGCATCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS TCA 72 bp CCTCAGAGTATTTGTCCAGTTCATCTTCGGTGCCCTTaGGTTTCTTTTGCAGTGACACCAGCTCATCTTCCA +
Preference number: 6 (lower is better)
Translates to: PQSICPVHLRCP*VSFAVTPAHLP
Trigger: TGGAAGATGAGCTGGTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000288398.10
ENST00000357980.9
ENST00000358278.7
ENST00000403994.9
ENST00000558314.5
ENST00000558347.5
ENST00000559556.5
ENST00000560970.6
ENST00000610733.1
ENST00000644204.1
ENST00000651344.1
CDS CCA 72 bp AGGTGCAGTCGTTATACCAAACGAACCAGGAGGCATTaGAAGCTGAAAGATGTCTGGGTTGCAGTTAAACCT +
Preference number: 6 (lower is better)
Translates to: RCSRYTKRTRRH*KLKDVWVAVKP
Trigger: AGGTTTAACTGCAACCCAGACATCTTTCAGCTTCCAATGCCTCCTGGTTCGTTTGGTATAACGACTGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS CCA 72 bp AAACGAACCAGGAGGCATTGGAAGCTGAAAGATGTCTaGGTTGCAGTTAAACCTAAAAACCACACGAGCCAT +
Preference number: 6 (lower is better)
Translates to: KRTRRHWKLKDV*VAVKPKNHTSH
Trigger: ATGGCTCGTGTGGTTTTTAGGTTTAACTGCAACCCAGACATCTTTCAGCTTCCAATGCCTCCTGGTTCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS CAA 90 bp AAGTTGTTCGTCACAGTTTTCAATTCTTCTTCAAGCTCGGCACATTaGCTAATGTTTTCGATCAGAGGCAGAAAGGGTGGGAGACAAGCC +
Preference number: 6 (lower is better)
Translates to: KLFVTVFNSSSSSAH*LMFSIRGRKGGRQA
Trigger: GGCTTGTCTCCCACCCTTTCTGCCTCTGATCGAAAACATTAGCAAATGTGCCGAGCTTGAAGAAGAATTGAAAACTGTGACGAACAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS TCA 72 bp AGGGGAAGCCCGCAAGAGAATACACCCAATAACTGTTaGCATTTCGCCAACTTTTTCCAAGACTTGGTAACA +
Preference number: 6 (lower is better)
Translates to: RGSPQENTPNNC*HFANFFQDLVT
Trigger: TGTTACCAAGTCTTGGAAAAAGTTGGCGAAATGTCAACAGTTATTGGGTGTATTCTCTTGCGGGCTTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CCA 72 bp TCCATTATTCTTAATTGTTCTTCCAGCTGTCGGACTTaGCTGTTAGTGGACACAGGAAATGCACAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: SIILNCSSSCRT*LLVDTGNAQGH
Trigger: ATGGCCTTGTGCATTTCCTGTGTCCACTAACAGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651344.1
CDS CAA 72 bp GTCACAGTTTTCAATTCTTCTTCAAGCTCGGCACATTaGCTAATGTTTTCGATCAGAGGCAGAAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: VTVFNSSSSSAH*LMFSIRGRKGG
Trigger: CCCACCCTTTCTGCCTCTGATCGAAAACATTAGCAAATGTGCCGAGCTTGAAGAAGAATTGAAAACTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS TCA 72 bp GCAATGCTGATTTCAGATAGGAAGACTGTCTTGTGGTaGGCTACCTTTAAGTGCATTACAAGCCCTCATCAA +
Preference number: 6 (lower is better)
Translates to: AMLISDRKTVLW*ATFKCITSPHQ
Trigger: TTGATGAGGGCTTGTAATGCACTTAAAGGTAGCTCACCACAAGACAGTCTTCCTATCTGAAATCAGCATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS TCA 72 bp GGAAAGCACTTAAGGCAAGATATAAATAGCAGAGGGTaGAGTGAAGGTGCAGTCGTTATACCAAACGAACCA +
Preference number: 6 (lower is better)
Translates to: GKHLRQDINSRG*SEGAVVIPNEP
Trigger: TGGTTCGTTTGGTATAACGACTGCACCTTCACTTCACCCTCTGCTATTTATATCTTGCCTTAAGTGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS TCA 72 bp TGCTGTTACTATCCACACTTTACACACAGGGAACTCTaGAATCCTGTTCGTGTTTGCTGGATACATTTGCCT +
Preference number: 6 (lower is better)
Translates to: CCYYPHFTHREL*NPVRVCWIHLP
Trigger: AGGCAAATGTATCCAGCAAACACGAACAGGATTTCAGAGTTCCCTGTGTGTAAAGTGTGGATAGTAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651577.1
CDS CCA 72 bp AGGAAGAATGTGCAAGTGCAAAGGAGCGTATCAATGTaGATGCCCTTGAATTGGAAAATTGTTTTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RKNVQVQRSVSM*MPLNWKIVLPG
Trigger: ACCTGGCAAAACAATTTTCCAATTCAAGGGCATCCACATTGATACGCTCCTTTGCACTTGCACATTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS CAA 72 bp GTGCAAGTGCAAAGGAGCGTATCAATGTGGATGCCCTaGAATTGGAAAATTGTTTTGCCAGGTTGGTATTCA +
Preference number: 6 (lower is better)
Translates to: VQVQRSVSMWMP*NWKIVLPGWYS
Trigger: TGAATACCAACCTGGCAAAACAATTTTCCAATTCAAGGGCATCCACATTGATACGCTCCTTTGCACTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS CAA 90 bp AGGAAGAATGTGCAAGTGCAAAGGAGCGTATCAATGTGGATGCCCTaGAATTGGAAAATTGTTTTGCCAGGTTGGTATTCAACCATAAGG +
Preference number: 6 (lower is better)
Translates to: RKNVQVQRSVSMWMP*NWKIVLPGWYSTIR
Trigger: CCTTATGGTTGAATACCAACCTGGCAAAACAATTTTCCAATTCAAGGGCATCCACATTGATACGCTCCTTTGCACTTGCACATTCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS CAA 90 bp GAGCCTCAGAACACTTATAAGACTATGATGGTCCATTATACACACTaGCACTGGTGGCTGTTTAAATATTGTGCATGGAAGTGGGAGATG +
Preference number: 6 (lower is better)
Translates to: EPQNTYKTMMVHYTH*HWWLFKYCAWKWEM
Trigger: CATCTCCCACTTCCATGCACAATATTTAAACAGCCACCAGTGCAAGTGTGTATAATGGACCATCATAGTCTTATAAGTGTTCTGAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS TCA 72 bp ATTGTTGCTATGAGCCTCAGAACACTTATAAGACTATaGTGGTCCATTATACACACTTGCACTGGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: IVAMSLRTLIRL*WSIIHTCTGGC
Trigger: ACAGCCACCAGTGCAAGTGTGTATAATGGACCATCATAGTCTTATAAGTGTTCTGAGGCTCATAGCAACAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS TCA 72 bp TGCTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: CLSSAAINAFKV*SIILNCSSSCR
Trigger: CCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558264.5
ENST00000559831.5
ENST00000644204.1
ENST00000651344.1
CDS TCA 72 bp ACCTTATCCTCTGCAGCCATTAATGCTTTCAAGGTCTaGTCCATTATTCTTAATTGTTCTTCCAGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: TLSSAAINAFKV*SIILNCSSSCR
Trigger: CCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560975.5
CDS CAA 72 bp AGTGCAAAGGAGCGTATCAATGTGGATGCCCTTGAATaGGAAAATTGTTTTGCCAGGTTGGTATTCAACCAT +
Preference number: 6 (lower is better)
Translates to: SAKERINVDALE*ENCFARLVFNH
Trigger: ATGGTTGAATACCAACCTGGCAAAACAATTTTCCAATTCAAGGGCATCCACATTGATACGCTCCTTTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560959.5
CDS CCA 72 bp TATAAGACTATGATGGTCCATTATACACACTTGCACTaGTGGCTGTTTAAATATTGTGCATGGAAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: YKTMMVHYTHLH*WLFKYCAWKWE
Trigger: CTCCCACTTCCATGCACAATATTTAAACAGCCACCAGTGCAAGTGTGTATAATGGACCATCATAGTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS CCA 72 bp GCTACCTTTAAGTGCATTACAAGCCCTCATCAACTCTaGAGTTCTCGGACACATTTACACATTGATTTATAC +
Preference number: 6 (lower is better)
Translates to: ATFKCITSPHQL*SSRTHLHIDLY
Trigger: GTATAAATCAATGTGTAAATGTGTCCGAGAACTCCAGAGTTGATGAGGGCTTGTAATGCACTTAAAGGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5
CDS CAA 72 bp CCAACAACTTTGAAGTGCGATAATTTGGCTCCTTTTTaGGCTGCCCAAAGAGCATTTATGAAGGGAAAACAA +
Preference number: 6 (lower is better)
Translates to: PTTLKCDNLAPF*AAQRAFMKGKQ
Trigger: TTGTTTTCCCTTCATAAATGCTCTTTGGGCAGCCAAAAAAGGAGCCAAATTATCGCACTTCAAAGTTGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560975.5
ENST00000561242.1
CDS CAA 72 bp AACACTTATAAGACTATGATGGTCCATTATACACACTaGCACTGGTGGCTGTTTAAATATTGTGCATGGAAG +
Preference number: 6 (lower is better)
Translates to: NTYKTMMVHYTH*HWWLFKYCAWK
Trigger: CTTCCATGCACAATATTTAAACAGCCACCAGTGCAAGTGTGTATAATGGACCATCATAGTCTTATAAGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558264.5