RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOMM40L (Homo sapiens)

Ensembl gene IDs: ENSG00000158882

Ensembl transcript IDs: ENST00000367987.1, ENST00000367988.8, ENST00000465512.5, ENST00000468803.1, ENST00000470426.5, ENST00000474486.5, ENST00000492482.5, ENST00000545897.5

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTCCACCACTCTGCTCCTGGGTCCTAGAGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTAGTCTTTGGCCCTAGGGCACCTGAC +
Preference number: 1 (lower is better)
Translates to: LSTTLLLGPRDHPAR*ALKRGLVFGPRAPD
Trigger: GTCAGGTGCCCTAGGGCCAAAGACTAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATCTCTAGGACCCAGGAGCAGAGTGGTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CCA 90 bp CCAGCTCACCTGGAACACCCTGGATACACTGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAGTGGTTGC +
Preference number: 1 (lower is better)
Translates to: PAHLEHPGYTGVGKC*DQRLGRVQREPSGC
Trigger: GCAACCACTGGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAGGGTGTTCCAGGTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CCA 90 bp AAAACTGAGCATGGTGAGAGAAGACAGTGTCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATG +
Preference number: 1 (lower is better)
Translates to: KTEHGERRQCQTEAP*RTFGTSDSLSYQSM
Trigger: CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCTCTCACCATGCTCAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 90 bp GGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAGTGGTTGCAATaGAAGACTAAAGCAATAACTGCCTCTTCATGCGGTCATGGGGAT +
Preference number: 1 (lower is better)
Translates to: GPKIGPGSKGAQWLQ*KTKAITASSCGHGD
Trigger: ATCCCCATGACCGCATGAAGAGGCAGTTATTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CCA 90 bp CTTTCCTTAGGGAATTCAGGTATCGTGGGGTCTAGTCCTTCCCCCTaGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTAT +
Preference number: 1 (lower is better)
Translates to: LSLGNSGIVGSSPSP*PSLSHIVSASKLLY
Trigger: ATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAGGGGGAAGGACTAGACCCCACGATACCTGAATTCCCTAAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR GCA 90 bp AAAGGGGATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTaGTCTAGAAGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCT +
Preference number: 1 (lower is better)
Translates to: KGDALYHRTHPPSRT*SRRPGPQIPHGWSS
Trigger: AGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 90 bp ATTCACAGTTTCATGGTCAAAGCCAGTTCCAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGGTATGCACCGCTTCTGTTTTGCTCG +
Preference number: 1 (lower is better)
Translates to: IHSFMVKASSRFNSL*FIQALRYAPLLFCS
Trigger: CGAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGGATAAATCACAGACTATTGAACCTGGAACTGGCTTTGACCATGAAACTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR GCA 90 bp CTTCCCCCTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTaGTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTT +
Preference number: 1 (lower is better)
Translates to: LPPGHPCLTSFQHPN*CIWILLFHLTFSRF
Trigger: AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAGGGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR CCA 90 bp TTCGATTTCTCATTTCCCTTGAAGTTAGGGCCATTCACAGTTTCATaGTCAAAGCCAGTTCCAGGTTCAATAGTCTGTGATTTATCCAGG +
Preference number: 1 (lower is better)
Translates to: FDFSFPLKLGPFTVS*SKPVPGSIVCDLSR
Trigger: CCTGGATAAATCACAGACTATTGAACCTGGAACTGGCTTTGACCATGAAACTGTGAATGGCCCTAACTTCAAGGGAAATGAGAAATCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGAGGTTCCAGCTGCTGTaGGGGCTGGCTCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRRFQLL*GLALDN
Trigger: GTTGTCCAGAGCCAGCCCCCACAGCAGCTGGAACCT...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCTCTGCCTCATCAACTaGCCCTGTGGCAGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRLCLIN*PCGSSS
Trigger: ACTGGAGCTGCCACAGGGGCAGTTGATGAGGCAGAG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCCTCAGAGGTTCCAGCTaGTGTGGGGGCTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPLRGSS*CGGWLW
Trigger: CCAGAGCCAGCCCCCACAGCAGCTGGAACCTCTGAG...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 2 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCTCAGAGGTTCCAGCTaGTGTGGGGGCTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFLRGSS*CGGWLW
Trigger: CCAGAGCCAGCCCCCACAGCAGCTGGAACCTCTGAG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 2 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGAGGAAGAAGGAAGCCTaGGGGCAAGGGGTGCCGGGG +
Preference number: 2 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWRKKEA*GQGVPG
Trigger: CCCCGGCACCCCTTGCCCTCAGGCTTCCTTCTTCCT...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTAGGTTCCAGCTGCTGTaGGGGCTGGCTCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFRFQLL*GLALDN
Trigger: GTTGTCCAGAGCCAGCCCCCACAGCAGCTGGAACCT...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTAGGTTCCAGCTGCTGTaGGGGCTGGCTCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSRFQLL*GLALDN
Trigger: GTTGTCCAGAGCCAGCCCCCACAGCAGCTGGAACCT...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCCTTCTGGGAATGGGTaGGCCCCACTTCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSPSGNG*APLPET
Trigger: GGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGG...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELRACLP*CRCSRR
Trigger: TCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCT...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCAGGAGATCTGCAGCTaGGGCCATGCTCACTTCCTT +
Preference number: 2 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSQEICS*GHAHFL
Trigger: AAGGAAGTGAGCATGGCCTCAGCTGCAGATCTCCTG...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGGGTCAGCTAATCCCATaGAGGATTAACCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLGQLIP*RINQRE
Trigger: TTCCCTTTGGTTAATCCTGCATGGGATTAGCTGACC...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGGGTCAGCTAATCCCATaGAGGATTAACCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRGQLIP*RINQRE
Trigger: TTCCCTTTGGTTAATCCTGCATGGGATTAGCTGACC...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 2 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPSLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCCTTCTGGGAATGGGTaGGCCCCACTTCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELPSGNG*APLPET
Trigger: GGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCTCACCTGGAACACCCTaGATACACTGGAGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLSPGTP*IHWSGK
Trigger: TTTCCCACTCCAGTGTATCCAGGGTGTTCCAGGTGA...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CAA 90 bp TCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGGCCTAC +
Preference number: 2 (lower is better)
Translates to: SWQPHYFLQRFLYAK*LGLLAELRSINEAY
Trigger: GTAGGCCTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCAGACCTGGCTTCACTaGGGAATAGTTCAGGGGATC +
Preference number: 2 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFQTWLH*GIVQGI
Trigger: GATCCCCTGAACTATTCCTCAGTGAAGCCAGGTCTG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCTCTGCCTCATCAACTaGCCCTGTGGCAGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELLCLIN*PCGSSS
Trigger: ACTGGAGCTGCCACAGGGGCAGTTGATGAGGCAGAG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGCATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTA +
Preference number: 2 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWDHPAR*ALKRGL
Trigger: TAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATC...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 2 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMSLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCGCTGGGACCAAAGATTaGGCCGGGTTCAAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELAGTKD*AGFKGS
Trigger: GCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGC...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCT +
Preference number: 2 (lower is better)
Translates to: YTIEHIHLLEPALEGQALQTEAP*RTFGTS
Trigger: AGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGAGGAAGAAGGAAGCCTaGGGGCAAGGGGTGCCGGGG +
Preference number: 2 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQRKKEA*GQGVPG
Trigger: CCCCGGCACCCCTTGCCCTCAGGCTTCCTTCTTCCT...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSVGPTS*DQTSSP
Trigger: AGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCAC...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 2 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGGTTCTGAGGAGGGCATaGTCCTGTCCACCACTCTGC +
Preference number: 2 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKVLRRA*SCPPLC
Trigger: GCAGAGTGGTGGACAGGACCATGCCCTCCTCAGAAC...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CAA 90 bp GAACACCCTGGATACACTGGAGTGGGAAAATGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAGCCCAGTGGTTGCAATGAAAGACTA +
Preference number: 2 (lower is better)
Translates to: EHPGYTGVGKCWDQR*GRVQREPSGCNERL
Trigger: TAGTCTTTCATTGCAACCACTGGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAGGGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAVGPTS*DQTSSP
Trigger: AGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCAC...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCGGTCAGCTAATCCCATaGAGGATTAACCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: WAPLPETKHLALQPYFPSGQLIP*RINQRE
Trigger: TTCCCTTTGGTTAATCCTGCATGGGATTAGCTGACC...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGCCAAAGGTTTCTGTATaGGAAGTTGCTAGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMPKVSV*EVARPA
Trigger: AGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGG...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGTTCTGAGGAGGGCATaGTCCTGTCCACCACTCTGC +
Preference number: 2 (lower is better)
Translates to: RNSSGDQGLETRLPTALFVLRRA*SCPPLC
Trigger: GCAGAGTGGTGGACAGGACCATGCCCTCCTCAGAAC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 2 (lower is better)
Translates to: FLYAKLLGLLAELRSINESLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACCCTTCTGGGAATGGGTaGGCCCCACTTCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYPSGNG*APLPET
Trigger: GGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGG...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 2 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCTCTGCCTCATCAACTaGCCCTGTGGCAGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFLCLIN*PCGSSS
Trigger: ACTGGAGCTGCCACAGGGGCAGTTGATGAGGCAGAG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCACATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACGTTCTGAGGAGGGCATaGTCCTGTCCACCACTCTGC +
Preference number: 2 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYVLRRA*SCPPLC
Trigger: GCAGAGTGGTGGACAGGACCATGCCCTCCTCAGAAC...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPVGPTS*DQTSSP
Trigger: AGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCAC...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTGCCCAGTGGTTGCAATaGAAGACTAAAGCAATAACT +
Preference number: 2 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSAQWLQ*KTKAIT
Trigger: AGTTATTGCTTTAGTCTTTCATTGCAACCACTGGGC...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCAGGAGATCTGCAGCTaGGGCCATGCTCACTTCCTT +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFQEICS*GHAHFL
Trigger: AAGGAAGTGAGCATGGCCTCAGCTGCAGATCTCCTG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTA +
Preference number: 2 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQDHPAR*ALKRGL
Trigger: TAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATC...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCTGGGACCAAAGATTaGGCCGGGTTCAAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQAGTKD*AGFKGS
Trigger: GCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGC...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTaGGCCTTTCCTCTCCTCGCCATTGGGCCAATTCCTTCGATTTCT +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLP*AFPLLAIGPIPSIS
Trigger: AGAAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGAAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTATAACTGCCTCTTCATaGGGTCATGGGGATAGTGGG +
Preference number: 2 (lower is better)
Translates to: RNSSGDQGLETRLPTALFITASS*GHGDSG
Trigger: CCCACTATCCCCATGACCGCATGAAGAGGCAGTTAT...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFRACLP*CRCSRR
Trigger: TCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCT...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCACAGACCTGGCTTCACTaGGGAATAGTTCAGGGGATC +
Preference number: 2 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPQTWLH*GIVQGI
Trigger: GATCCCCTGAACTATTCCTCAGTGAAGCCAGGTCTG...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: RNSSGDQGLETRLPTALFGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 2 (lower is better)
Translates to: RNSSGDQGLETRLPTALFLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCCCTCAGATTCCACATaGTTGGAGTTCTGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFPSDST*LEFWPS
Trigger: ACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTACATGGTTGGAGTTCTaGCCAAGTCTGGAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFTWLEF*PSLELS
Trigger: AGAAAGCTCCAGACTTGGCCAGAACTCCAACCATGT...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCACCCTCAGATTCCACATaGTTGGAGTTCTGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPPSDST*LEFWPS
Trigger: ACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGG...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CAA 90 bp CCTTCCCCCTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATaGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATT +
Preference number: 2 (lower is better)
Translates to: PSPWPSLSHIVSASK*LYLDTAVSSHFFQI
Trigger: AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAGGGGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTAGGGAGCCCAGTGGTTaGAATGAAAGACTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFREPSG*NERLKQ
Trigger: TTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCT...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACGCCCAGTGGTTGCAATaGAAGACTAAAGCAATAACT +
Preference number: 2 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYAQWLQ*KTKAIT
Trigger: AGTTATTGCTTTAGTCTTTCATTGCAACCACTGGGC...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCAGGAGATCTGCAGCTaGGGCCATGCTCACTTCCTT +
Preference number: 2 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFQEICS*GHAHFL
Trigger: AAGGAAGTGAGCATGGCCTCAGCTGCAGATCTCCTG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGAGGGAGCCCAGTGGTTaGAATGAAAGACTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQREPSG*NERLKQ
Trigger: TTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCT...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTATAACTGCCTCTTCATaGGGTCATGGGGATAGTGGG +
Preference number: 2 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSITASS*GHGDSG
Trigger: CCCACTATCCCCATGACCGCATGAAGAGGCAGTTAT...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTA +
Preference number: 2 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSAPLLF*SFLQEL
Trigger: TAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGC...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTGTCATACCAGAGCATaGTTTTCTCTAATGTTCAGA +
Preference number: 2 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFCHTRA*FSLMFR
Trigger: TCTGAACATTAGAGAAAATCATGCTCTGGTATGACA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCCTCTCCTCGCCATTaGGCCAATTCCTTCGATTTC +
Preference number: 2 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQISSPRH*ANSFDF
Trigger: GAAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGA...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTATAACTGCCTCTTCATaGGGTCATGGGGATAGTGGG +
Preference number: 2 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFITASS*GHGDSG
Trigger: CCCACTATCCCCATGACCGCATGAAGAGGCAGTTAT...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTA +
Preference number: 2 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFAPLLF*SFLQEL
Trigger: TAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGC...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 2 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR GCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCCAAAGGTTTCTGTATaGGAAGTTGCTAGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFPKVSV*EVARPA
Trigger: AGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGG...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFRFNSL*FIQALR
Trigger: CCTCAGAGCCTGGATAAATCACAGACTATTGAACCT...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR TCA 72 bp GGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: GTKSSTSRACLP*CRCSRRSAAEA
Trigger: GGCCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR GCA 72 bp CTACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCAGGAGATCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: LRVPNPAHPGPV*HDAAAPGDLQL
Trigger: CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CCA 72 bp CTGGAACACCCTGGATACACTGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: LEHPGYTGVGKC*DQRLGRVQREP
Trigger: GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAGGGTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 72 bp AGAAGCTCCTTCTGGGAATGGGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCTTCAGCCCTACTTTCC +
Preference number: 3 (lower is better)
Translates to: RSSFWEWVGPTS*DQTSSPSALLS
Trigger: GGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGGAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCCTACTTTCCCAGCCTaGGGAGGCTCTGGGATGGAA +
Preference number: 3 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELPTFPA*GGSGME
Trigger: TTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAGG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: FLYAKLLGLLAELRSINECWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTTTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFFLYAK*LGLLAE
Trigger: CTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CCA 72 bp CATGGTGAGAGAAGACAGTGTCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCTGATAGTCTGTCATAC +
Preference number: 3 (lower is better)
Translates to: HGERRQCQTEAP*RTFGTSDSLSY
Trigger: GTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCTCTCACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKCWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCCTACTTTCCCAGCCTaGGGAGGCTCTGGGATGGAA +
Preference number: 3 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFPTFPA*GGSGME
Trigger: TTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAGG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTTTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RNSSGDQGLETRLPTALFFLYAK*LGLLAE
Trigger: CTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 72 bp ATTGGGCCGGGTTCAAAGGGAGCCCAGTGGTTGCAATaGAAGACTAAAGCAATAACTGCCTCTTCATGCGGT +
Preference number: 3 (lower is better)
Translates to: IGPGSKGAQWLQ*KTKAITASSCG
Trigger: ACCGCATGAAGAGGCAGTTATTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCTTTGAACCCGGCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR GCA 72 bp TTTATCCAGGCTCTGAGGTATGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTAGTTTGGCCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: FIQALRYAPLLF*SFLQELVWPER
Trigger: CCTTTCTGGCCAAACTAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCCTCCAAGAGCTAGTTaGGCCAGAAAGGGGATGCTT +
Preference number: 3 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFPPRAS*ARKGML
Trigger: AAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAGG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 72 bp GTTCCAGGTTCAATAGTCTGTGATTTATCCAGGCTCTaGGGTATGCACCGCTTCTGTTTTGCTCGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VPGSIVCDLSRL*GMHRFCFARSS
Trigger: GGAGGAACGAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGGATAAATCACAGACTATTGAACCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR GCA 72 bp GCTTTATACCATAGAACACATCCACCTTCTAGAACCTaGTCTAGAAGGCCAGGCCCTCAGATTCCACATGGT +
Preference number: 3 (lower is better)
Translates to: ALYHRTHPPSRT*SRRPGPQIPHG
Trigger: ACCATGTGGAATCTGAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTCAGATTCCACATGGTaGGAGTTCTGGCCAAGTCTG +
Preference number: 3 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSDSTW*EFWPSL
Trigger: CAGACTTGGCCAGAACTCCAACCATGTGGAATCTGA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR TCA 72 bp TTCATGGTCAAAGCCAGTTCCAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGGTATGCACCGCTTCTG +
Preference number: 3 (lower is better)
Translates to: FMVKASSRFNSL*FIQALRYAPLL
Trigger: CAGAAGCGGTGCATACCTCAGAGCCTGGATAAATCACAGACTATTGAACCTGGAACTGGCTTTGACCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFCWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCCTCCAAGAGCTAGTTaGGCCAGAAAGGGGATGCTT +
Preference number: 3 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFPPRAS*ARKGML
Trigger: AAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAGG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR-3UTR CAA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGAAGAAGGAAGCCTaGGGGCAAGGGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLRKKEA*GQGVPG
Trigger: CCCCGGCACCCCTTGCCCTCAGGCTTCCTTCTTCCT...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCCTGGGCGTTCAGGCTaGCACTGCTGTCCATATCCC +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRPGRSG*HCCPYP
Trigger: GGGATATGGACAGCAGTGGCAGCCTGAACGCCCAGG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGCTCGGAGCCGCTCTaGCAAGAGGAGCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLSSEPL*QEEQDL
Trigger: CAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCT...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGCCAGTGTCAAGATaGCCCCCTCTTCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLQPVSR*PPLRLA
Trigger: GGCCAGGCGAAGAGGGGGCCATCTTGACACTGGCTG...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCAGCTGCTGTGGGGGCTaGCTCTGGACAACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLSCCGG*LWTTSA
Trigger: GGCTGAGGTTGTCCAGAGCCAGCCCCCACAGCAGCT...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGGTTCTGAGGAGGGCATaGTCCTGTCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLVLRRA*SCPPLC
Trigger: GCAGAGTGGTGGACAGGACCATGCCCTCCTCAGAAC...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCAGGAGATCTGCAGCTaGGGCCATGCTCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLQEICS*GHAHFL
Trigger: AAGGAAGTGAGCATGGCCTCAGCTGCAGATCTCCTG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSRACLP*CRCSRR
Trigger: TCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCT...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCCAGCCAGTGTCAAGATaGCCCCCTCTTCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSQPVSR*PPLRLA
Trigger: GGCCAGGCGAAGAGGGGGCCATCTTGACACTGGCTG...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLQTEAP*RTFGTS
Trigger: AGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTG...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGTCTAGTCCTTCCCCCTaGCCATCCCTGTCTCACATC +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRSSPSP*PSLSHI
Trigger: GATGTGAGACAGGGATGGCCAGGGGGAAGGACTAGA...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCGCACCAGCCGATGAGTaGGGCTCTGCAGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPAPADE*GSAGSE
Trigger: CTCACTTCCTGCAGAGCCTCACTCATCGGCTGGTGC...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCTCCAAGGGCTAGGGTaGCAGGCAGAGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFLQGLG*QAEGAS
Trigger: AGATGCCCCCTCTGCCTGTCACCCTAGCCCTTGGAG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSELPIP*IGRMEV
Trigger: CACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTC...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAGCTCGGAGCCGCTCTaGCAAGAGGAGCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPSSEPL*QEEQDL
Trigger: CAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCT...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCGTCAGGAACTTGGCCTaGTGCGTCTGGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLVRNLA*CVWKTA
Trigger: GGCTGTCTTCCAGACGCAGCAGGCCAAGTTCCTGAC...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLSLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCCCTTCTGGGAATGGGTaGGCCCCACTTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPPSGNG*APLPET
Trigger: GGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGG...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGTCTTTGCATAGACGGTaGAGCTCATCGAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLSLHRR*SSSKLP
Trigger: TGGGAGCTTCGATGAGCTGCACCGTCTATGCAAAGA...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCCTGGGCGTTCAGGCTaGCACTGCTGTCCATATCCC +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFPGRSG*HCCPYP
Trigger: GGGATATGGACAGCAGTGGCAGCCTGAACGCCCAGG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCCTCTGCCTCATCAACTaGCCCTGTGGCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSLCLIN*PCGSSS
Trigger: ACTGGAGCTGCCACAGGGGCAGTTGATGAGGCAGAG...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGCATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCAGATTCCACATGGTTaGAGTTCTGGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRQIPHG*SSGQVW
Trigger: CCAGACTTGGCCAGAACTCCAACCATGTGGAATCTG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCCCTCAGATTCCACATaGTTGGAGTTCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRPSDST*LEFWPS
Trigger: ACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCTCCAAGGGCTAGGGTaGCAGGCAGAGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINELQGLG*QAEGAS
Trigger: AGATGCCCCCTCTGCCTGTCACCCTAGCCCTTGGAG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCTGTTGCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPCCASD*GRLQGL
Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGCAACA...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCAATCTGTTGCGCCAGTaGTTGAGGAAGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLNLLRQ*LRKAPR
Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGCAACAGATT...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSVGPTS*DQTSSP
Trigger: AGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCAC...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCCAGGAGATCTGCAGCTaGGGCCATGCTCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPQEICS*GHAHFL
Trigger: AAGGAAGTGAGCATGGCCTCAGCTGCAGATCTCCTG...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCTCAGAGGTTCCAGCTaGTGTGGGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELLRGSS*CGGWLW
Trigger: CCAGAGCCAGCCCCCACAGCAGCTGGAACCTCTGAG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCCAAAGGTTTCTGTATaGGAAGTTGCTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLPKVSV*EVARPA
Trigger: AGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCTGCGCCACCTGGAAATaGCTGCTCAGAACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLCATWK*LLRTLL
Trigger: CAACAAGGTTCTGAGCAGCCATTTCCAGGTGGCGCA...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCTATCCCCTACCACAGTaGGGAACACCTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSYPLPQ*GTPQWD
Trigger: GTCCCACTGAGGTGTTCCCCACTGTGGTAGGGGATA...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGTTGGCCTGCTGCGTCTaGAAGACAGCCTTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMLACCV*KTALAR
Trigger: CCGAGCTAAGGCTGTCTTCCAGACGCAGCAGGCCAA...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCGCCATGTCAGGAACTTaGCCTGCTGCGTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPAMSGT*PAASGR
Trigger: TCTTCCAGACGCAGCAGGCCAAGTTCCTGACATGGC...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGCAGCCAGTGTCAAGATaGCCCCCTCTTCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWQPVSR*PPLRLA
Trigger: GGCCAGGCGAAGAGGGGGCCATCTTGACACTGGCTG...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFDHPAR*ALKRGL
Trigger: TAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATC...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGGTAGCTCAGAGGCTCTaGGTAATAGCATTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLVAQRL*VIAFLR
Trigger: TCTCAGGAATGCTATTACCCAGAGCCTCTGAGCTAC...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTGCCATGTCAGGAACTTaGCCTGCTGCGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFAMSGT*PAASQW
Trigger: CCACTGAGACGCAGCAGGCCAAGTTCCTGACATGGC...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR TCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGAGGCTCTGCAGGAAGTaGGCAACCATGATCACCGAC +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMRLCRK*ATMITD
Trigger: GTCGGTGATCATGGTTGCTCACTTCCTGCAGAGCCT...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTAGGCTCTGCAGGAAGTaGGCAACCATGATCACCGAC +
Preference number: 4 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSRLCRK*ATMITD
Trigger: GTCGGTGATCATGGTTGCTCACTTCCTGCAGAGCCT...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCGCACCAGCCGATGAGTaGGGCTCTGCAGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELAPADE*GSAGSE
Trigger: CTCACTTCCTGCAGAGCCTCACTCATCGGCTGGTGC...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCTCCAAGGGCTAGGGTaGCAGGCAGAGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALLQGLG*QAEGAS
Trigger: AGATGCCCCCTCTGCCTGTCACCCTAGCCCTTGGAG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALRACLP*CRCSRR
Trigger: TCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCTGGGAATACATCTTTaGATAGACGGTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLLGIHL*IDGAAH
Trigger: ATGAGCTGCACCGTCTATGCAAAGATGTATTCCCAG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCTGAACCTGTTCATTTaGCCTGTGGTAGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLLNLFI*PVVVTC
Trigger: GCAAGTTACTACCACAGGGCAAATGAACAGGTTCAG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTCTCAGAGGTTCCAGCTaGTGTGGGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSLRGSS*CGGWLW
Trigger: CCAGAGCCAGCCCCCACAGCAGCTGGAACCTCTGAG...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCGAAGCTCCCAGGGTTaGGCAGGGGTTCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQARSSQG*AGVPLG
Trigger: GCCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCGAAGCTCCCAGGGTTaGGCAGGGGTTCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFRSSQG*AGVPLG
Trigger: GCCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCTGCGCCACCTGGAAATaGCTGCTCAGAACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSCATWK*LLRTLL
Trigger: CAACAAGGTTCTGAGCAGCCATTTCCAGGTGGCGCA...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGAGCTGCTGTGGGGGCTaGCTCTGGACAACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKSCCGG*LWTTSA
Trigger: GGCTGAGGTTGTCCAGAGCCAGCCCCCACAGCAGCT...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEQTEAP*RTFGTS
Trigger: AGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGCCATTCACAGTTTCATaGTCAAAGCCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRPFTVS*SKPVPG
Trigger: ACCTGGAACTGGCTTTGACCATGAAACTGTGAATGG...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCGCCGAGGTTAGCCTGTaGAAGGACGCTATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELAEVSL*KDAIAP
Trigger: AGGGGCAATAGCGTCCTTTCACAGGCTAACCTCGGC...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACAGGAAGAAGGAAGCCTaGGGGCAAGGGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYRKKEA*GQGVPG
Trigger: CCCCGGCACCCCTTGCCCTCAGGCTTCCTTCTTCCT...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGGTGGGCCCCACTTCCTaGGACCAAACATCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWVGPTS*DQTSSP
Trigger: AGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCAC...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTAGGGCCTGTCTGCCATaGTGCCGCTGCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFRACLP*CRCSRR
Trigger: TCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCT...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCGATTTATCCAGGCTCTaGGGTATGCACCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSDLSRL*GMHRFC
Trigger: ACAGAAGCGGTGCATACCTCAGAGCCTGGATAAATC...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGCGTCTCAGTGGGACTaGGCTGCCAATCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSASQWD*AANPLH
Trigger: ATGCAGGGGATTGGCAGCTCAGTCCCACTGAGACGC...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR GCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPYSPSN*HVRNLA
Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGCCTGAGGGCAAGGGGTaGCGGGGGAATTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKPEGKG*RGNSAI
Trigger: TATGGCTGAATTCCCCCGGCACCCCTTGCCCTCAGG...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGTTTAGTCCAGAGGACTaGGAAGAGCCGAGGTTAGCC +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMFSPED*EEPRLA
Trigger: GGCTAACCTCGGCTCTTCCCAGTCCTCTGGACTAAA...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGTGCGCCACCTGGAAATaGCTGCTCAGAACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMCATWK*LLRTLL
Trigger: CAACAAGGTTCTGAGCAGCCATTTCCAGGTGGCGCA...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGATAGTGTGCGCCACCTaGAAATGGCTGCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMIVCAT*KWLLRT
Trigger: GGTTCTGAGCAGCCATTTCCAGGTGGCGCACACTAT...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCAGGTTCCAGCTGCTGTaGGGGCTGGCTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALRFQLL*GLALDN
Trigger: GTTGTCCAGAGCCAGCCCCCACAGCAGCTGGAACCT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGGCTGGGACCAAAGATTaGGCCGGGTTCAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWAGTKD*AGFKGS
Trigger: GCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGC...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCTCACCTGGAACACCCTaGATACACTGGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSSPGTP*IHWSGK
Trigger: TTTCCCACTCCAGTGTATCCAGGGTGTTCCAGGTGA...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCCAGATTCCACATGGTTaGAGTTCTGGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSQIPHG*SSGQVW
Trigger: CCAGACTTGGCCAGAACTCCAACCATGTGGAATCTG...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCGTAGCTCAGAGGCTCTaGGTAATAGCATTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLVAQRL*VIAFLR
Trigger: TCTCAGGAATGCTATTACCCAGAGCCTCTGAGCTAC...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGTCCGACGCTACACCTaGAACAGGAAGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMVRRYT*NRKSRE
Trigger: TTCCCTACTCTTCCTGTTCCAGGTGTAGCGTCGGAC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367987.1
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCACACCTCAGTGGGACTaGGCTGCCAATCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALTPQWD*AANPLH
Trigger: ATGCAGGGGATTGGCAGCTCAGTCCCACTGAGGTGT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR TCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGCACCAGCCGATGAGTaGGGCTCTGCAGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFAPADE*GSAGSE
Trigger: CTCACTTCCTGCAGAGCCTCACTCATCGGCTGGTGC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTGCATGGGCCCCGCCTaGTCCCACATTCAATGTAGC +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKCMGPA*SHIQCS
Trigger: GCTACATTGAATGTGGGATCAGGCGGGGCCCATGCA...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGATTTATCCAGGCTCTaGGGTATGCACCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMDLSRL*GMHRFC
Trigger: ACAGAAGCGGTGCATACCTCAGAGCCTGGATAAATC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFELPIP*IGRMEV
Trigger: CACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGAGGAACTTGGCCTGCTaGGTCTCAGTGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKRNLAC*VSVGLS
Trigger: GCTCAGTCCCACTGAGACGCAGCAGGCCAAGTTCCT...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGTATCCCCTACCACAGTaGGGAACACCTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEYPLPQ*GTPQWD
Trigger: GTCCCACTGAGGTGTTCCCCACTGTGGTAGGGGATA...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGAAGAGGAGCAAGACCTaGGCGTTCAGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKKRSKT*AFRLPL
Trigger: CAGTGGCAGCCTGAACGCCCAGGTCTTGCTCCTCTT...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTAGCTGCTGTGGGGGCTaGCTCTGGACAACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSCCGG*LWTTSA
Trigger: GGCTGAGGTTGTCCAGAGCCAGCCCCCACAGCAGCT...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCACATGGTTGGAGTTCTaGCCAAGTCTGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSTWLEF*PSLELS
Trigger: AGAAAGCTCCAGACTTGGCCAGAACTCCAACCATGT...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
3UTR CAA 72 bp CCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAAT +
Preference number: 4 (lower is better)
Translates to: PHYFLQRFLYAK*LGLLAELRSIN
Trigger: ATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCGCCGAGGTTAGCCTGTaGAAGGACGCTATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAAEVSL*KDAIAP
Trigger: AGGGGCAATAGCGTCCTTTCACAGGCTAACCTCGGC...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCAGGCTCTGCAGGAAGTaGGCAACCATGATCACCGAC +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALRLCRK*ATMITD
Trigger: GTCGGTGATCATGGTTGCTCACTTCCTGCAGAGCCT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTTGTTGCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSCCASD*GRLQGL
Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGCAACA...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCAGACCTGGCTTCACTaGGGAATAGTTCAGGGGATC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEQTWLH*GIVQGI
Trigger: GATCCCCTGAACTATTCCTCAGTGAAGCCAGGTCTG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGCAGCCATCTTGAGTaGTGGCAGAACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSGSHLE*WQNCSF
Trigger: GAAGCTGCAGTTCTGCCATCACTCAAGATGGCTGCC...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR GCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTCAAAGTCCCCATTGGTaGCAGGCCCAATGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSQSPHW*QAQCVP
Trigger: GGGAACACATTGGGCCTGGCACCAATGGGGACTTTG...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGAGGAACTTGGCCTGCTaGGTCTGGAAGACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINERNLAC*VWKTAL
Trigger: TAAGGCTGTCTTCCAGACGCAGCAGGCCAAGTTCCT...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCCTGAACCTGTTCATTTaGCCTGTGGTAGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSLNLFI*PVVVTC
Trigger: GCAAGTTACTACCACAGGGCAAATGAACAGGTTCAG...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAGGGAGCCCAGTGGTTaGAATGAAAGACTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPREPSG*NERLKQ
Trigger: TTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCT...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGCCACCTTCTAGAACCTaGTCTAGAAGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKPPSRT*SRRPGP
Trigger: AGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGG...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCCAGGCTCTGAGGTATaGACCGCTTCTGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEPGSEV*TASVLL
Trigger: GAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGACTGCAGCTTCACGCTaGATTCTTAGCGTGGCCGTA +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINETAASR*ILSVAV
Trigger: TACGGCCACGCTAAGAATGCAGCGTGAAGCTGCAGT...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGATAGTGTGCGCCACCTaGAAATGGCTGCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEIVCAT*KWLLRT
Trigger: GGTTCTGAGCAGCCATTTCCAGGTGGCGCACACTAT...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGCCATGTCAGGAACTTaGCCTGCTGCGTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSAMSGT*PAASGR
Trigger: TCTTCCAGACGCAGCAGGCCAAGTTCCTGACATGGC...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGTTCCTAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEFLGSE*LCSHLP
Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTAGGAA...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQADHPAR*ALKRGL
Trigger: TAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATC...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGGATGGAAAACAGGATaGTCAGCTAATCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMGWKTG*SANPMQ
Trigger: CTGCATGGGATTAGCTGACCATCCTGTTTTCCATCC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCGGAGTGGGAAAATGCTaGGACCAAAGATTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALGVGKC*DQRLGR
Trigger: CCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCC...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTACATGGTTGGAGTTCTaGCCAAGTCTGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFTWLEF*PSLELS
Trigger: AGAAAGCTCCAGACTTGGCCAGAACTCCAACCATGT...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTACATGGTTGGAGTTCTaGCCAAGTCTGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSTWLEF*PSLELS
Trigger: AGAAAGCTCCAGACTTGGCCAGAACTCCAACCATGT...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTCCAAGAGCTAGTTTaGCCAGAAAGGGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSLQELV*PERGCF
Trigger: AAAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAG...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCTCCAAGAGCTAGTTTaGCCAGAAAGGGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFLQELV*PERGCF
Trigger: AAAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGTAGCTCAGAGGCTCTaGGTAATAGCATTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMVAQRL*VIAFLR
Trigger: TCTCAGGAATGCTATTACCCAGAGCCTCTGAGCTAC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTGCATGGGCCCCGCCTaGTCCCACATTCAATGTAGC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFCMGPA*SHIQCS
Trigger: GCTACATTGAATGTGGGATCAGGCGGGGCCCATGCA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGTGGCAGCTCCAGTTCTaGGGAGGGCATGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQWQLQF*GGHGPV
Trigger: GACAGGACCATGCCCTCCTCAGAACTGGAGCTGCCA...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCAGACCTGGCTTCACTaGGGAATAGTTCAGGGGATC +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALQTWLH*GIVQGI
Trigger: GATCCCCTGAACTATTCCTCAGTGAAGCCAGGTCTG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCTCATGTGTATAGTGTaGGCCACCTGGAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINELMCIV*ATWKWL
Trigger: CAGCCATTTCCAGGTGGCGCACACTATACACATGAG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQELPIP*IGRMEV
Trigger: CACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTC...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCCACCTTCTAGAACCTaGTCTAGAAGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFPPSRT*SRRPGP
Trigger: AGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCCACCTTCTAGAACCTaGTCTAGAAGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAPPSRT*SRRPGP
Trigger: AGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACGTCAGGAACTTGGCCTaGTGCGTCTCAGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYVRNLA*CVSVGL
Trigger: CAGTCCCACTGAGACGCAGCAGGCCAAGTTCCTGAC...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTGTTCTGAGGAGGGCATaGTCCTGTCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFVLRRA*SCPPLC
Trigger: GCAGAGTGGTGGACAGGACCATGCCCTCCTCAGAAC...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALSLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGTCACCTGGAACACCCTaGATACACTGGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWSPGTP*IHWSGK
Trigger: TTTCCCACTCCAGTGTATCCAGGGTGTTCCAGGTGA...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCCCTCAGATTCCACATaGTTGGAGTTCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELPSDST*LEFWPS
Trigger: ACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCCCTCAGATTCCACATaGTTGGAGTTCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINEPSDST*LEFWPS
Trigger: ACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGTCCTCTCCTCGCCATTaGGCCAATTCCTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINESSPRH*ANSFDF
Trigger: GAAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGA...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCTGCTCAGAACCTTGTTaGCAACGAGCTTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALCSEPC*QRASLP
Trigger: AGGGAGTGAAGCTCGTTGTCAACAAGGTTCTGAGCA...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTGTTGCGCCAGTGATTaGGGAAGGCTCCAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFCCASD*GRLQGL
Trigger: TAGCCCTTGGAGCCTTCCTCAATCACTGGCGCAACA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTAATCTGTTGCGCCAGTaGTTGAGGAAGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFNLLRQ*LRKAPR
Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGCAACAGATT...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGGATTTATCCAGGCTCTaGGGTATGCACCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKDLSRL*GMHRFC
Trigger: ACAGAAGCGGTGCATACCTCAGAGCCTGGATAAATC...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGCGTAAGCGCCATCTTTaGATCTGGCAAAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FLYAKLLGLLAELRSINERKRHL*IWQRKL
Trigger: CAGCTTTCTTTGCCAGATTCAAAGATGGCGCTTACG...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR GCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCAAAGTCCCCATTGGTaGCAGGCCCAATGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFQSPHW*QAQCVP
Trigger: GGGAACACATTGGGCCTGGCACCAATGGGGACTTTG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCACTCCCTCCATCTGTaGTGGGAATACATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELHSLHL*WEYIFA
Trigger: TGCAAAGATGTATTCCCAGCACAGATGGAGGGAGTG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGTCAGGAACTTGGCCTaGTGCGTCTGGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPVRNLA*CVWKTA
Trigger: GGCTGTCTTCCAGACGCAGCAGGCCAAGTTCCTGAC...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR GCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALYSPSN*HVRNLA
Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCTCTGCCTCATCAACTaGCCCTGTGGCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQLCLIN*PCGSSS
Trigger: ACTGGAGCTGCCACAGGGGCAGTTGATGAGGCAGAG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTATAACTGCCTCTTCATaGGGTCATGGGGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSITASS*GHGDSG
Trigger: CCCACTATCCCCATGACCGCATGAAGAGGCAGTTAT...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALAPLLF*SFLQEL
Trigger: TAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGC...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCCAGGCTCTGAGGTATaGACCGCTTCTGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFPGSEV*TASVLL
Trigger: GAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCTTTAGTCCAGAGGACTaGGAAGAGCCGAGGTTAGCC +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAFSPED*EEPRLA
Trigger: GGCTAACCTCGGCTCTTCCCAGTCCTCTGGACTAAA...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGTTGGCCTGCTGCGTCTaGAAGACAGCCTTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQLACCV*KTALAR
Trigger: CCGAGCTAAGGCTGTCTTCCAGACGCAGCAGGCCAA...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGATCACCCAGCAAGGTaGGCTCTGAAGAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPDHPAR*ALKRGL
Trigger: TAGGCCCCTCTTCAGAGCCCACCTTGCTGGGTGATC...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTAGCCTTGGGAGGCTCTaGGATGGAAAACAGGATGGT +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFSLGRL*DGKQDG
Trigger: ACCATCCTGTTTTCCATCCCAGAGCCTCCCAAGGCT...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTCCTCTCCTCGCCATTaGGCCAATTCCTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKSSPRH*ANSFDF
Trigger: GAAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGA...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTCTAGTCCTTCCCCCTaGCCATCCCTGTCTCACATC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSSPSP*PSLSHI
Trigger: GATGTGAGACAGGGATGGCCAGGGGGAAGGACTAGA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGGAATTCAGGTATCGTaGGGTCTAGTCCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFGIQVS*GLVLPP
Trigger: AGGGGGAAGGACTAGACCCCACGATACCTGAATTCC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCTCAGAAACTTCCACATaGTCCGACGCTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALSETST*SDATPG
Trigger: TCCAGGTGTAGCGTCGGACCATGTGGAAGTTTCTGA...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367987.1
CDS-3UTR TCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCTGCTCAGAACCTTGTTaGCAACGAGCTTCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQACSEPC*QRASLP
Trigger: AGGGAGTGAAGCTCGTTGTCAACAAGGTTCTGAGCA...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELRFNSL*FIQALR
Trigger: CCTCAGAGCCTGGATAAATCACAGACTATTGAACCT...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCAAAGTCCCCATTGGTaGCAGGCCCAATGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQQSPHW*QAQCVP
Trigger: GGGAACACATTGGGCCTGGCACCAATGGGGACTTTG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGCTGGGAATACATCTTTaGATAGACGGTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWLGIHL*IDGAAH
Trigger: ATGAGCTGCACCGTCTATGCAAAGATGTATTCCCAG...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCACTCCCTCCATCTGTaGTGGGAATACATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALHSLHL*WEYIFA
Trigger: TGCAAAGATGTATTCCCAGCACAGATGGAGGGAGTG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGCTGAACCTGTTCATTTaGCCTGTGGTAGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWLNLFI*PVVVTC
Trigger: GCAAGTTACTACCACAGGGCAAATGAACAGGTTCAG...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGAGGGAGCCCAGTGGTTaGAATGAAAGACTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWREPSG*NERLKQ
Trigger: TTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCT...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTCCAAAGGTTTCTGTATaGGAAGTTGCTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSPKVSV*EVARPA
Trigger: AGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGG...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCGAAGCTCCCAGGGTTaGGCAGGGGTTCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFRSSQG*AGVPLG
Trigger: GCCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACCTACTTTCCCAGCCTTaGGAGGCTCTGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYLLSQP*EALGWK
Trigger: TTTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAG...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR CAA 72 bp ATTTATCCAGGCTCTGAGGTATGCACCGCTTCTGTTTaGCTCGTTCCTCCAAGAGCTAGTTTGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: IYPGSEVCTASV*LVPPRASLARK
Trigger: CTTTCTGGCCAAACTAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGGATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTAGGAAGAAGGAAGCCTaGGGGCAAGGGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFRKKEA*GQGVPG
Trigger: CCCCGGCACCCCTTGCCCTCAGGCTTCCTTCTTCCT...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALRFNSL*FIQALR
Trigger: CCTCAGAGCCTGGATAAATCACAGACTATTGAACCT...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTGACCCAACCCAACCCTaGTTGGGCCCCGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIDPTQP*LGPAQS
Trigger: TGATTGGGCGGGGCCCAATCAGGGTTGGGTTGGGTC...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR GCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTACTCGCCATCAAACTaGCATGTCAGGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYYSPSN*HVRNLA
Trigger: GGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTA...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCCAGGCTCTGAGGTATaGACCGCTTCTGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQPGSEV*TASVLL
Trigger: GAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCGCTGTATTTGGATACTaGTGTTTCATCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: WAPLPETKHLALQPYFPSAVFGY*CFISLF
Trigger: AAAAAGTGAGATGAAACAGCAGTATCCAAATACAGC...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCATTTAGTCCAGAGGACTaGGAAGAGCCGAGGTTAGCC +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPFSPED*EEPRLA
Trigger: GGCTAACCTCGGCTCTTCCCAGTCCTCTGGACTAAA...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAATAGTGTGCGCCACCTaGAAATGGCTGCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPIVCAT*KWLLRT
Trigger: GGTTCTGAGCAGCCATTTCCAGGTGGCGCACACTAT...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGTTCCTAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQFLGSE*LCSHLP
Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTAGGAA...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTCACCTGGAACACCCTaGATACACTGGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSPGTP*IHWSGK
Trigger: TTTCCCACTCCAGTGTATCCAGGGTGTTCCAGGTGA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCCCATTCACAGTTTCATaGTCAAAGCCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALPFTVS*SKPVPG
Trigger: ACCTGGAACTGGCTTTGACCATGAAACTGTGAATGG...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTCCTCTCCTCGCCATTaGGCCAATTCCTTCGATTTC +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSSPRH*ANSFDF
Trigger: GAAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTGCCGAGGTTAGCCTGTaGAAGGACGCTATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSAEVSL*KDAIAP
Trigger: AGGGGCAATAGCGTCCTTTCACAGGCTAACCTCGGC...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTGGTCAGCTAATCCCATaGAGGATTAACCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFGQLIP*RINQRE
Trigger: TTCCCTTTGGTTAATCCTGCATGGGATTAGCTGACC...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTCATCCAGGGCCTGTCTaGCATGATGCCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIHPGPV*HDAAAP
Trigger: TGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCCAAAGGTTTCTGTATaGGAAGTTGCTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFPKVSV*EVARPA
Trigger: AGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPAPLLF*SFLQEL
Trigger: TAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGC...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCACCGCTTCTGTTTTaGTCGTTCCTCCAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQAPLLF*SFLQEL
Trigger: TAGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGC...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGCTGTATTTGGATACTaGTGTTTCATCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMAVFGY*CFISLF
Trigger: AAAAAGTGAGATGAAACAGCAGTATCCAAATACAGC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTCCTTCTGGGAATGGGTaGGCCCCACTTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIPSGNG*APLPET
Trigger: GGTCTCAGGAAGTGGGGCCCACCCATTCCCAGAAGG...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTGCTGGGACCAAAGATTaGGCCGGGTTCAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSAGTKD*AGFKGS
Trigger: GCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGC...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCAGACCGAGGCCCCCTaGAGGACCTTTGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFQTEAP*RTFGTS
Trigger: AGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCAGATTCCACATGGTTaGAGTTCTGGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQQIPHG*SSGQVW
Trigger: CCAGACTTGGCCAGAACTCCAACCATGTGGAATCTG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCTCCAAGAGCTAGTTTaGCCAGAAAGGGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFLQELV*PERGCF
Trigger: AAAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCCATTCACAGTTTCATaGTCAAAGCCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAPFTVS*SKPVPG
Trigger: ACCTGGAACTGGCTTTGACCATGAAACTGTGAATGG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGTGTCATACCAGAGCATaGTTTTCTCTAATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWCHTRA*FSLMFR
Trigger: TCTGAACATTAGAGAAAATCATGCTCTGGTATGACA...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACAGGTTCAATAGTCTGTaGTTTATCCAGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYRFNSL*FIQALR
Trigger: CCTCAGAGCCTGGATAAATCACAGACTATTGAACCT...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTAAGAGGAGCAAGACCTaGGCGTTCAGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIKRSKT*AFRLPL
Trigger: CAGTGGCAGCCTGAACGCCCAGGTCTTGCTCCTCTT...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367988.8
CDS-3UTR CCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTGCTGGGACCAAAGATTaGGCCGGGTTCAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFAGTKD*AGFKGS
Trigger: GCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGC...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTGCATGGGCCCCGCCTaGTCCCACATTCAATGTAGC +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFCMGPA*SHIQCS
Trigger: GCTACATTGAATGTGGGATCAGGCGGGGCCCATGCA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTGCCCAGTGGTTGCAATaGAAGACTAAAGCAATAACT +
Preference number: 4 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFAQWLQ*KTKAIT
Trigger: AGTTATTGCTTTAGTCTTTCATTGCAACCACTGGGC...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCTGTCATACCAGAGCATaGTTTTCTCTAATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: YTIEHIHLLEPALEGQALCHTRA*FSLMFR
Trigger: TCTGAACATTAGAGAAAATCATGCTCTGGTATGACA...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTGGGGGCAGCCATCTTaGGTGATGGCAGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFWGQPS*VMAELQ
Trigger: CTGCAGTTCTGCCATCACTCAAGATGGCTGCCCCCA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR GCA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCTGGGAATACATCTTTaGATAGACGGTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQLGIHL*IDGAAH
Trigger: ATGAGCTGCACCGTCTATGCAAAGATGTATTCCCAG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGTCAGCTAATCCCATaGAGGATTAACCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPGQLIP*RINQRE
Trigger: TTCCCTTTGGTTAATCCTGCATGGGATTAGCTGACC...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAAGGGAGCCCAGTGGTTaGAATGAAAGACTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPREPSG*NERLKQ
Trigger: TTGCTTTAGTCTTTCATTGCAACCACTGGGCTCCCT...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCCAAATTGCTGTATTTaGATACTGCTGTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RNSSGDQGLETRLPTALFPNCCI*ILLFHL
Trigger: GAGATGAAACAGCAGTATCCAAATACAGCAATTTGG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTGGAATTCAGGTATCGTaGGGTCTAGTCCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIGIQVS*GLVLPP
Trigger: AGGGGGAAGGACTAGACCCCACGATACCTGAATTCC...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
3UTR CAA 72 bp TGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATaGCTGTATTTGGATACTGCTGTTTCATCTCACTTT +
Preference number: 4 (lower is better)
Translates to: WPSLSHIVSASK*LYLDTAVSSHF
Trigger: AAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTAATCTGTTGCGCCAGTaGTTGAGGAAGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFNLLRQ*LRKAPR
Trigger: CCTTGGAGCCTTCCTCAATCACTGGCGCAACAGATT...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCAGACCTGGCTTCACTaGGGAATAGTTCAGGGGATC +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFQTWLH*GIVQGI
Trigger: GATCCCCTGAACTATTCCTCAGTGAAGCCAGGTCTG...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCTCATGTGTATAGTGTaGGCCACCTGGAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFLMCIV*ATWKWL
Trigger: CAGCCATTTCCAGGTGGCGCACACTATACACATGAG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTTCAGAAACTTCCACATaGTCCGACGCTACACCATCT +
Preference number: 4 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSSETST*SDATPS
Trigger: AGATGGTGTAGCGTCGGACCATGTGGAAGTTTCTGA...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTTCCTAGGGTCAGAGTaGCTGTGTAGTCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFFLGSE*LCSHLP
Trigger: GGGGAGATGACTACACAGCCACTCTGACCCTAGGAA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTCTTTGCATAGACGGTaGAGCTCATCGAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFSLHRR*SSSKLP
Trigger: TGGGAGCTTCGATGAGCTGCACCGTCTATGCAAAGA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTCACTCCCTCCATCTGTaGTGGGAATACATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQIHSLHL*WEYIFA
Trigger: TGCAAAGATGTATTCCCAGCACAGATGGAGGGAGTG...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR GCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCTCATGTGTATAGTGTaGGCCACCTGGAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFLMCIV*ATWKWL
Trigger: CAGCCATTTCCAGGTGGCGCACACTATACACATGAG...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCAGAAACTTCCACATaGTCCGACGCTACACCATCT +
Preference number: 4 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQISETST*SDATPS
Trigger: AGATGGTGTAGCGTCGGACCATGTGGAAGTTTCTGA...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCTGGATACACTGGAGTaGGAAAATGCTGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFLDTLE*ENAGTK
Trigger: TTTGGTCCCAGCATTTTCCCACTCCAGTGTATCCAG...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CCA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCCAAATTGCTGTATTTaGATACTGCTGTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFPNCCI*ILLFHL
Trigger: GAGATGAAACAGCAGTATCCAAATACAGCAATTTGG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR TCA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTGTCATACCAGAGCATaGTTTTCTCTAATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFCHTRA*FSLMFR
Trigger: TCTGAACATTAGAGAAAATCATGCTCTGGTATGACA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS GCA 90 bp CTTGGCCTGCTGCGTCTGGAAGACAGCCTTAGCTCGGAGCCGCTCTaGCAAGAGGAGCAAGACCTGGGCGTTCAGGCTGCCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LGLLRLEDSLSSEPL*QEEQDLGVQAATAV
Trigger: GACAGCAGTGGCAGCCTGAACGCCCAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCTAAGGCTGTCTTCCAGACGCAGCAGGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS GCA 90 bp CTCGGAGCCGCTCTGCCAAGAGGAGCAAGACCTGGGCGTTCAGGCTaGCACTGCTGTCCATATCCCCTACCACAGTGGGGAACACCTCAG +
Preference number: 5 (lower is better)
Translates to: LGAALPRGARPGRSG*HCCPYPLPQWGTPQ
Trigger: CTGAGGTGTTCCCCACTGTGGTAGGGGATATGGACAGCAGTGGCAGCCTGAACGCCCAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS GCA 90 bp GAACTTGGCCTGCTGCGTCTCAGTGGGACTGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTGATATCCCGGCAAGCCCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: ELGLLRLSGTELPIP*IGRMEVISRQAQGT
Trigger: AGTGCCCTGGGCTTGCCGGGATATCACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGACGCAGCAGGCCAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465512.5
ENST00000545897.5
CDS-3UTR CAA 90 bp GCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGCACACCCCGGTCATCTaGATGGGGGCAGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: AHPGPVCHDAAAPGDLQLHTPVI*MGAAIL
Trigger: CAAGATGGCTGCCCCCATCAAGATGACCGGGGTGTG...CAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS GCA 90 bp TACCACAGTGGGGAACACCTCAGTGGGACTGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTGATATCCCGGCAAGCCCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: YHSGEHLSGTELPIP*IGRMEVISRQAQGT
Trigger: AGTGCCCTGGGCTTGCCGGGATATCACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGGTGTTCCCCACTGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS-3UTR CAA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCTCGAAGCTCCCAGGGTaGGGCAGGGGTTCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: WAPLPETKHLALQPYFPSSKLPG*GRGSSR
Trigger: CCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCGA...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCGGGGCAAAGTCCCCATaGGTGCCAGGCCCAATGTGT +
Preference number: 5 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLGAKSP*VPGPMC
Trigger: ACACATTGGGCCTGGCACCAATGGGGACTTTGCCCC...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCCCTGTGGTAGTAACTaGCATGGGCCCCGCCTGATC +
Preference number: 5 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFPCGSN*HGPRLI
Trigger: GATCAGGCGGGGCCCATGCAAGTTACTACCACAGGG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPCWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTTCGAAGCTCCCAGGGTaGGGCAGGGGTTCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSSKLPG*GRGSSR
Trigger: CCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCGA...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTCCTACTTTCCCAGCCTaGGGAGGCTCTGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFPTFPA*GGSGME
Trigger: TTCCATCCCAGAGCCTCCCAAGGCTGGGAAAGTAGG...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSCWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACGGGTACCAAATCCAGCACATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCCTCCAAGAGCTAGTTaGGCCAGAAAGGGGATGCTT +
Preference number: 5 (lower is better)
Translates to: YGYQIQHIQGLSAMMPLLPPRAS*ARKGML
Trigger: AAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAGG...GAGCAGCGGCATCATGGCAGACAGGCCCTGGATGTGCTGGATTTGGTACCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGTGCCATGTCAGGAACTaGGCCTGCTGCGTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMCHVRN*ACCVSV
Trigger: CACTGAGACGCAGCAGGCCAAGTTCCTGACATGGCA...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CAA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGGGGGCAAAGTCCCCATaGGTGCCAGGCCCAATGTGT +
Preference number: 5 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWGAKSP*VPGPMC
Trigger: ACACATTGGGCCTGGCACCAATGGGGACTTTGCCCC...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGGGGGCAAAGTCCCCATaGGTGCCAGGCCCAATGTGT +
Preference number: 5 (lower is better)
Translates to: FLYAKLLGLLAELRSINEGAKSP*VPGPMC
Trigger: ACACATTGGGCCTGGCACCAATGGGGACTTTGCCCC...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGAAGACAGTGTCAGACCGAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCCCCCTGGAGGACCTTaGGAACCTCTGATAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RRQCQTEAPWRTFGTSDSPPGGP*EPLIVC
Trigger: ACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGG...ACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTCGGTCTGACACTGTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGCCCCCTGGAGGACCTTaGGAACCTCTGATAGTCTGT +
Preference number: 5 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMPPGGP*EPLIVC
Trigger: ACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGG...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCTGCACCGCTTCTGTTTaGCTCGTTCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPCTASV*LVPPRA
Trigger: AGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCA...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTTCGAAGCTCCCAGGGTaGGGCAGGGGTTCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFSKLPG*GRGSSR
Trigger: CCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCGA...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CATCCAGGGCCTGTCTGCCATGATGCCGCTGCTCCAGGAGATCTGCAGCTGAGGAACCAAAGGAGAATGTaGTGTCTTGTAGCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: HPGPVCHDAAAPGDLQLRNQRRM*CLVALC
Trigger: ACACAAGGCTACAAGACACAACATTCTCCTTTGGTT...CCTCAGCTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCCCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCTTCCTCTCCTCGCCATaGGGCCAATTCCTTCGATTT +
Preference number: 5 (lower is better)
Translates to: WAPLPETKHLALQPYFPSFLSSP*GQFLRF
Trigger: AAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGAA...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS GCA 90 bp ATGGGGGCAGCCATCTTGAGTGATGGCAGAACTGCAGCTTCACGCTaGATTCTTAGCGTGGCCGTAAGCGCCATCTTTGAATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: MGAAILSDGRTAASR*ILSVAVSAIFESGK
Trigger: TTTGCCAGATTCAAAGATGGCGCTTACGGCCACGCTAAGAATGCAGCGTGAAGCTGCAGTTCTGCCATCACTCAAGATGGCTGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CAA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTGCCATGTCAGGAACTaGGCCTGCTGCGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKCHVRN*ACCVWK
Trigger: CTTCCAGACGCAGCAGGCCAAGTTCCTGACATGGCA...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CAA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCCCTGTGGTAGTAACTaGCATGGGCCCCGCCTGATC +
Preference number: 5 (lower is better)
Translates to: RNSSGDQGLETRLPTALFPCGSN*HGPRLI
Trigger: GATCAGGCGGGGCCCATGCAAGTTACTACCACAGGG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TGGGCCCCACTTCCTGAGACCAAACATCTAGCCCTTCAGCCCTACTTTCCCAGCCTTGTAGCCTTGTGTTaGCCTCAAACTCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: WAPLPETKHLALQPYFPSLVALC*PQTPLQ
Trigger: TTGGAGTGGAGTTTGAGGCAAACACAAGGCTACAAG...GCTGGGAAAGTAGGGCTGAAGGGCTAGATGTTTGGTCTCAGGAAGTGGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGTCAGATTCCACATGGTaGGAGTTCTGGCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMSDSTW*EFWPSL
Trigger: CAGACTTGGCCAGAACTCCAACCATGTGGAATCTGA...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGCCTGAACCTGTTCATTaGCCCTGTGGTAGTAACTTG +
Preference number: 5 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMPEPVH*PCGSNL
Trigger: CAAGTTACTACCACAGGGCAAATGAACAGGTTCAGG...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCCTCCAAGAGCTAGTTaGGCCAGAAAGGGGATGCTT +
Preference number: 5 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELPPRAS*ARKGML
Trigger: AAGCATCCCCTTTCTGGCCAAACTAGCTCTTGGAGG...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCTGCACCGCTTCTGTTTaGCTCGTTCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELCTASV*LVPPRA
Trigger: AGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCA...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS TCA 90 bp AACCTGTTCATTTGCCCTGTGGTAGTAACTTGCATGGGCCCCGCCTaGTCCCACATTCAATGTAGCTACCCAGTGTACAGCCGAGTACTT +
Preference number: 5 (lower is better)
Translates to: NLFICPVVVTCMGPA*SHIQCSYPVYSRVL
Trigger: AAGTACTCGGCTGTACACTGGGTAGCTACATTGAATGTGGGATCAGGCGGGGCCCATGCAAGTTACTACCACAGGGCAAATGAACAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS-3UTR CAA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGTGGCTGCTCAGAACCTaGTTGACAACGAGCTTCACT +
Preference number: 5 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWWLLRT*LTTSFT
Trigger: AGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAGCCA...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp ACTGGAGTGGGAAAATGCTGGGACCAAAGATTGGGCCGGGTTCAAAGGGAGCCCAACCAAAGGAGAATGTaGTGTCTTGTAGCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: TGVGKCWDQRLGRVQREPNQRRM*CLVALC
Trigger: ACACAAGGCTACAAGACACAACATTCTCCTTTGGTT...GGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTTTCCCACTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTCCCCCTGGAGGACCTTaGGAACCTCTGATAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RNSSGDQGLETRLPTALFPPGGP*EPLIVC
Trigger: ACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGG...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCGCTGGGAATACATCTTaGCATAGACGGTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: YTIEHIHLLEPALEGQALAGNTS*HRRCSS
Trigger: TGAGCTGCACCGTCTATGCAAAGATGTATTCCCAGC...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTGCTCAGAACCTTGTaGACAACGAGCTTCACTCCC +
Preference number: 5 (lower is better)
Translates to: LYTIEHIHLLEPALEGQALLRTL*TTSFTP
Trigger: GGGAGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTTCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTTGGCTGCTCAGAACCTaGTTGACAACGAGCTTCACT +
Preference number: 5 (lower is better)
Translates to: LHAVMGIVGVTIGTKLFSWLLRT*LTTSFT
Trigger: AGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAGCCA...AGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCATGCCATGTCAGGAACTaGGCCTGCTGCGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPCHVRN*ACCVWK
Trigger: CTTCCAGACGCAGCAGGCCAAGTTCCTGACATGGCA...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367987.1
ENST00000367988.8
CDS-3UTR CAA 90 bp TCATGCGGTCATGGGGATAGTGGGGGTGACCATAGGAACAAAGTTGTTCTCTGGCTTGTAGCCTTGTGTTaGCCTCAAACTCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: SCGHGDSGGDHRNKVVLWLVALC*PQTPLQ
Trigger: TTGGAGTGGAGTTTGAGGCAAACACAAGGCTACAAG...CCAGAGAACAACTTTGTTCCTATGGTCACCCCCACTATCCCCATGACCGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCTGCACCGCTTCTGTTTaGCTCGTTCCTCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LYTIEHIHLLEPALEGQACTASV*LVPPRA
Trigger: AGCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCA...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGCCAGGCCCTCAGATTCCACATGGTTGGAGTTCTGGCCAAGTCTGGAGCTTTGATTTCTCATTTCCCTaGAAGTTAGGGCCATTCACA +
Preference number: 5 (lower is better)
Translates to: RPGPQIPHGWSSGQVWSFDFSFP*KLGPFT
Trigger: TGTGAATGGCCCTAACTTCAAGGGAAATGAGAAATC...AAAGCTCCAGACTTGGCCAGAACTCCAACCATGTGGAATCTGAGGGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTCCTGTTTTCCTGGCAACCCCACTACTTCCTCCAAAGGTTTCTGTATGCGAAGTTCCTCTCCTCGCCATaGGGCCAATTCCTTCGATTT +
Preference number: 5 (lower is better)
Translates to: LLFSWQPHYFLQRFLYAKFLSSP*GQFLRF
Trigger: AAATCGAAGGAATTGGCCCAATGGCGAGGAGAGGAA...CTTCGCATACAGAAACCTTTGGAGGAAGTAGTGGGGTTGCCAGGAAAACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACATGGGGGCAGCCATCTaGAGTGATGGCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYMGAAI*SDGRTA
Trigger: TGCAGTTCTGCCATCACTCAAGATGGCTGCCCCCAT...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS-3UTR CAA 90 bp GAGGCCCCCTGGAGGACCTTTGGAACCTCTGATAGTCTGTCATACCAGAGCATGGTTTCAGCATCCAAATaGCTGTATTTGGATACTGCT +
Preference number: 5 (lower is better)
Translates to: EAPWRTFGTSDSLSYQSMVSASK*LYLDTA
Trigger: AGCAGTATCCAAATACAGCAATTTGGATGCTGAAAC...CATGCTCTGGTATGACAGACTATCAGAGGTTCCAAAGGTCCTCCAGGGGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTGCTGGGAATACATCTTaGCATAGACGGTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFAGNTS*HRRCSS
Trigger: TGAGCTGCACCGTCTATGCAAAGATGTATTCCCAGC...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCTGCTCAGAACCTTGTaGACAACGAGCTTCACTCCC +
Preference number: 5 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQLLRTL*TTSFTP
Trigger: GGGAGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCCTGAACCTGTTCATTaGCCCTGTGGTAGTAACTTG +
Preference number: 5 (lower is better)
Translates to: LYTIEHIHLLEPALEGQAPEPVH*PCGSNL
Trigger: CAAGTTACTACCACAGGGCAAATGAACAGGTTCAGG...GGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCATTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPFLYAK*LGLLAE
Trigger: CTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCGATTTCTCATTTCCCTaGAAGTTAGGGCCATTCACA +
Preference number: 5 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELDFSFP*KLGPFT
Trigger: TGTGAATGGCCCTAACTTCAAGGGAAATGAGAAATC...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTCACACCCCGGTCATCTaGATGGGGGCAGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFHTPVI*MGAAIL
Trigger: CAAGATGGCTGCCCCCATCAAGATGACCGGGGTGTG...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCATGGCTGCTCAGAACCTaGTTGACAACGAGCTTCACT +
Preference number: 5 (lower is better)
Translates to: DALYHRTHPPSRTCSRRPWLLRT*LTTSFT
Trigger: AGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAGCCA...TGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCACTAGTCCAACTTCTCCAGACTAACGCAGACTTTTCTCTTCCCTTGGCCTTTCTTGTAGCCTTGTGTTaGCCTCAAACTCCACTCCAA +
Preference number: 5 (lower is better)
Translates to: SLVQLLQTNADFSLPLAFLVALC*PQTPLQ
Trigger: TTGGAGTGGAGTTTGAGGCAAACACAAGGCTACAAG...AAAGGCCAAGGGAAGAGAAAAGTCTGCGTTAGTCTGGAGAAGTTGGACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGGCCCTCGATTTCTCATTTCCCTaGAAGTTAGGGCCATTCACA +
Preference number: 5 (lower is better)
Translates to: YTIEHIHLLEPALEGQALDFSFP*KLGPFT
Trigger: TGTGAATGGCCCTAACTTCAAGGGAAATGAGAAATC...GAGGGCCTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCCGGAGCATTAATGAGGTTTCAGCATCCAAATaGCTGTATTTGGATACTGCT +
Preference number: 5 (lower is better)
Translates to: FLYAKLLGLLAELRSINEVSASK*LYLDTA
Trigger: AGCAGTATCCAAATACAGCAATTTGGATGCTGAAAC...CTCATTAATGCTCCGGAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp ATGCTTTATACCATAGAACACATCCACCTTCTAGAACCTGCTCTAGAAGGCCAGCCTGAACCTGTTCATTaGCCCTGTGGTAGTAACTTG +
Preference number: 5 (lower is better)
Translates to: MLYTIEHIHLLEPALEGQPEPVH*PCGSNL
Trigger: CAAGTTACTACCACAGGGCAAATGAACAGGTTCAGG...CTGGCCTTCTAGAGCAGGTTCTAGAAGGTGGATGTGTTCTATGGTATAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp AGGAATAGTTCAGGGGATCAGGGCCTAGAGACAAGACTCCCAACTGCCTTATTTACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: RNSSGDQGLETRLPTALFTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...AAATAAGGCAGTTGGGAGTCTTGTCTCTAGGCCCTGATCCCCTGAACTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp GCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTGCTGGGACCAAAGATaGGGCCGGGTTCAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: ASKLLYLDTAVSSHFFQICWDQR*GRVQRE
Trigger: CTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCA...AATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TACTTCCTCCAAAGGTTTCTGTATGCGAAGTTGCTAGGCCTGCTGGCTGAGCTCTCCAAATTGCTGTATTaGGATACTGCTGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: YFLQRFLYAKLLGLLAELSKLLY*DTAVSS
Trigger: AGATGAAACAGCAGTATCCAAATACAGCAATTTGGA...GAGCTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CTGGCCATCCCTGTCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACAACCAAAGGAGAATGTaGTGTCTTGTAGCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: LAIPVSHRFSIQIAVFGYNQRRM*CLVALC
Trigger: ACACAAGGCTACAAGACACAACATTCTCCTTTGGTT...GTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGACAGGGATGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCTCACATCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTTCAGATTCCACATGGTaGGAGTTCTGGCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SHIVSASKLLYLDTAVSSSDSTW*EFWPSL
Trigger: CAGACTTGGCCAGAACTCCAACCATGTGGAATCTGA...AGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGATGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTCTGCTCAGAACCTTGTaGACAACGAGCTTCACTCCC +
Preference number: 5 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFLLRTL*TTSFTP
Trigger: GGGAGTGAAGCTCGTTGTCAACAAGGTTCTGAGCAG...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp CATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTTCCAGATTTTTTCTGTATGCGAAGTaGCTAGGCCTGCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HPNCCIWILLFHLTFSRFFLYAK*LGLLAE
Trigger: CTCAGCCAGCAGGCCTAGCAACTTCGCATACAGAAA...AAATCTGGAAAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS-3UTR CAA 90 bp TCGTTTCAGCATCCAAATTGCTGTATTTGGATACTGCTGTTTCATCTCACTTTTACCATAGGAACAAAGTaGTTCTCTGGAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: SFQHPNCCIWILLFHLTFTIGTK*FSGSTE
Trigger: TTCTGTGCTTCCAGAGAACAACTTTGTTCCTATGGT...AAAAGTGAGATGAAACAGCAGTATCCAAATACAGCAATTTGGATGCTGAAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367988.8
ENST00000545897.5
CDS CCA 72 bp TGCATAGACGGTGCAGCTCATCGAAGCTCCCAGGGTTaGGCAGGGGTTCCTCTCGGCGGGGGCTCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: CIDGAAHRSSQG*AGVPLGGGSGG
Trigger: CCCGCCGGAGCCCCCGCCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCGATGAGCTGCACCGTCTATGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000465512.5
ENST00000470426.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS CAA 72 bp TTGCATAGACGGTGCAGCTCATCGAAGCTCCCAGGGTaGGGCAGGGGTTCCTCTCGGCGGGGGCTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: LHRRCSSSKLPG*GRGSSRRGLRR
Trigger: CCGCCGGAGCCCCCGCCGAGAGGAACCCCTGCCCAACCCTGGGAGCTTCGATGAGCTGCACCGTCTATGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000465512.5
ENST00000470426.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS GCA 72 bp CTGCGTCTGGAAGACAGCCTTAGCTCGGAGCCGCTCTaGCAAGAGGAGCAAGACCTGGGCGTTCAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LRLEDSLSSEPL*QEEQDLGVQAA
Trigger: GGCAGCCTGAACGCCCAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCTAAGGCTGTCTTCCAGACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS GCA 72 bp GGGGAACACCTCAGTGGGACTGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTGATATCCCGGCAAGCC +
Preference number: 6 (lower is better)
Translates to: GEHLSGTELPIP*IGRMEVISRQA
Trigger: GGCTTGCCGGGATATCACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGGTGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS GCA 72 bp CTGCTGCGTCTCAGTGGGACTGAGCTGCCAATCCCCTaGATAGGCCGCATGGAGGTGATATCCCGGCAAGCC +
Preference number: 6 (lower is better)
Translates to: LLRLSGTELPIP*IGRMEVISRQA
Trigger: GGCTTGCCGGGATATCACCTCCATGCGGCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGACGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465512.5
ENST00000545897.5
CDS GCA 72 bp GCTCTGCCAAGAGGAGCAAGACCTGGGCGTTCAGGCTaGCACTGCTGTCCATATCCCCTACCACAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ALPRGARPGRSG*HCCPYPLPQWG
Trigger: TCCCCACTGTGGTAGGGGATATGGACAGCAGTGGCAGCCTGAACGCCCAGGTCTTGCTCCTCTTGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000470426.5
CDS GCA 72 bp TCAGGAACTTGGCCTGCTGCGTCTTTGCATAGACGGTaGAGCTCATCGAAGCTCCCAGGGTTGGGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: SGTWPAASLHRR*SSSKLPGLGRG
Trigger: ACCCCTGCCCAACCCTGGGAGCTTCGATGAGCTGCACCGTCTATGCAAAGACGCAGCAGGCCAAGTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474486.5
CDS CCA 72 bp CCATTATCCGGCTCCCCAGCCTCAGAAACTTCCACATaGTCCGACGCTACACCTGGAACAGGAAGAGTAGGG +
Preference number: 6 (lower is better)
Translates to: PLSGSPASETST*SDATPGTGRVG
Trigger: CCCTACTCTTCCTGTTCCAGGTGTAGCGTCGGACCATGTGGAAGTTTCTGAGGCTGGGGAGCCGGATAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367987.1
CDS GCA 72 bp TCCATCTGTGCTGGGAATACATCTTTGCATAGACGGTaGAGCTCATCGAAGCTCCCAGGGTTGGGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: SICAGNTSLHRR*SSSKLPGLGRG
Trigger: ACCCCTGCCCAACCCTGGGAGCTTCGATGAGCTGCACCGTCTATGCAAAGATGTATTCCCAGCACAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000465512.5
ENST00000470426.5
ENST00000492482.5
ENST00000545897.5
CDS CCA 72 bp CCATTATCCGGCTCCCCAGCCTCAGAAACTTCCACATaGTCCGACGCTACACCATCTCAGACCATCATGCTG +
Preference number: 6 (lower is better)
Translates to: PLSGSPASETST*SDATPSQTIML
Trigger: CAGCATGATGGTCTGAGATGGTGTAGCGTCGGACCATGTGGAAGTTTCTGAGGCTGGGGAGCCGGATAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367988.8
ENST00000465512.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS CCA 72 bp CCCGATACTCGCCATCAAACTGCCATGTCAGGAACTTaGCCTGCTGCGTCTTTGCATAGACGGTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PDTRHQTAMSGT*PAASLHRRCSS
Trigger: TGAGCTGCACCGTCTATGCAAAGACGCAGCAGGCCAAGTTCCTGACATGGCAGTTTGATGGCGAGTATCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474486.5
CDS CCA 72 bp CAGGCCCAATGTGTTCCCCATTTTAGTCCAGAGGACTaGGAAGAGCCGAGGTTAGCCTGTGAAAGGACGCTA +
Preference number: 6 (lower is better)
Translates to: QAQCVPHFSPED*EEPRLACERTL
Trigger: TAGCGTCCTTTCACAGGCTAACCTCGGCTCTTCCCAGTCCTCTGGACTAAAATGGGGAACACATTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000465512.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS TCA 72 bp ATTTGCCCTGTGGTAGTAACTTGCATGGGCCCCGCCTaGTCCCACATTCAATGTAGCTACCCAGTGTACAGC +
Preference number: 6 (lower is better)
Translates to: ICPVVVTCMGPA*SHIQCSYPVYS
Trigger: GCTGTACACTGGGTAGCTACATTGAATGTGGGATCAGGCGGGGCCCATGCAAGTTACTACCACAGGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000468803.1
ENST00000470426.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5
CDS GCA 72 bp GCCATCTTGAGTGATGGCAGAACTGCAGCTTCACGCTaGATTCTTAGCGTGGCCGTAAGCGCCATCTTTGAA +
Preference number: 6 (lower is better)
Translates to: AILSDGRTAASR*ILSVAVSAIFE
Trigger: TTCAAAGATGGCGCTTACGGCCACGCTAAGAATGCAGCGTGAAGCTGCAGTTCTGCCATCACTCAAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545897.5
CDS CCA 72 bp ACTCCCCAATCAGGTCAGGATTTCCTAGGGTCAGAGTaGCTGTGTAGTCATCTCCCCGATACTCGCCATCAA +
Preference number: 6 (lower is better)
Translates to: TPQSGQDFLGSE*LCSHLPDTRHQ
Trigger: TTGATGGCGAGTATCGGGGAGATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTGATTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000367987.1
ENST00000367988.8
ENST00000465512.5
ENST00000468803.1
ENST00000470426.5
ENST00000474486.5
ENST00000492482.5
ENST00000545897.5