RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TOM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100284

Ensembl transcript IDs: ENST00000395736.7, ENST00000404284.6, ENST00000411850.5, ENST00000424387.5, ENST00000425375.5, ENST00000439512.5, ENST00000443206.2, ENST00000447733.5, ENST00000449058.7, ENST00000449508.1, ENST00000456128.5, ENST00000465529.1, ENST00000487670.1, ENST00000491987.1, ENST00000492723.1, ENST00000608674.5, ENST00000608749.5

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGCCGGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCG +
Preference number: 1 (lower is better)
Translates to: VAGGCWVRAHVDQVS*RLGLTWGLGGLACS
Trigger: CGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 90 bp GGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCATaGTGGCCAGAGTCCTCTTGCTGGCTGGAGTCAGTGCCCACAGAA +
Preference number: 1 (lower is better)
Translates to: GVSPESMGGAGRGAA*WPESSCWLESVPTE
Trigger: TTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR CCA 90 bp CTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACCTCCACACCCT +
Preference number: 1 (lower is better)
Translates to: LMRSRPLRAELQLRT*AAAAPQGASTPPHP
Trigger: AGGGTGTGGAGGTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp GCATGGGCCCGGAGCAGGGTATCACTCAGTGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCTCC +
Preference number: 1 (lower is better)
Translates to: AWARSRVSLSEGESH*VKQPASQPACPGAS
Trigger: GGAGGCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGCTCCGGGCCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp TGGAGCCCAGGTTCATTCCTGCCAGCTGGGATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCT +
Preference number: 1 (lower is better)
Translates to: WSPGSFLPAGMRGCR*LLGQGPCRSGQLPA
Trigger: AGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAACCTGGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 90 bp CACTGCTGGAGCCCAGGTTCATTCCTGCCAGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTG +
Preference number: 1 (lower is better)
Translates to: HCWSPGSFLPAGMRG*RWLLGQGPCRSGQL
Trigger: CAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAACCTGGGCTCCAGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 90 bp ATGGTCAGCTGGGGTGGGAAAGGAGGCAGAGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCTCCACACC +
Preference number: 1 (lower is better)
Translates to: MVSWGGKGGRAARSH*SADLSPSSSHCLHT
Trigger: GGTGTGGAGGCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGCCTCCTTTCCCACCCCAGCTGACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp CAGGCCTCGACTGGCAGTGTGGGCTCTGAAGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCACTCAGTGAAGGAGAGTCACACTGG +
Preference number: 1 (lower is better)
Translates to: QASTGSVGSEGLLGA*ARSRVSLSEGESHW
Trigger: CCAGTGTGACTCTCCTTCACTGAGTGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp GCCAGCCAGCCTGTCCTGGGGCCTCCACTTCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAGGAGGCAGAGCAGCCAGATCCCACT +
Preference number: 1 (lower is better)
Translates to: ASQPVLGPPLLSKVS*SAGVGKEAEQPDPT
Trigger: AGTGGGATCTGGCTGCTCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp AGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCAAAGTCTCATGGTCAGCTGGGGTGG +
Preference number: 1 (lower is better)
Translates to: RVTLGQAASQPASLS*GLHFSAKSHGQLGW
Trigger: CCACCCCAGCTGACCATGAGACTTTGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR GCA 90 bp GCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: APLPVQEDQPRGEPQ*CGARPEGTEEGWRA
Trigger: TGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 90 bp CTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACTGTG +
Preference number: 1 (lower is better)
Translates to: LTSTLSTKSWLATST*KRCPQFLTQVSKTV
Trigger: CACAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 90 bp CATCACCTCGTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACTGTTTTGTGTATCCAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: HHLVEVLIPHDSLLY*SEGIFGTVLCIQPG
Trigger: ACCTGGCTGGATACACAAAACAGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR CCA 90 bp TTCTTGACACAGGTTTCTAAGACTGTGAGAGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTGCTCGGAGG +
Preference number: 1 (lower is better)
Translates to: FLTQVSKTVRASITS*KFLFPTILFFTARR
Trigger: CCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCTGTGTCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR CCA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 2 (lower is better)
Translates to: GSGPMSIRSAAGSASLGASAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CAA 90 bp ACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: TCSLGLMRSRPLRAE*QLRTWAAAAPQGAS
Trigger: GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR GCA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GSGPMSIRSAAGSASLGASDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp GGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 2 (lower is better)
Translates to: GPCRSGQLPARPHLGPWWSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...CCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp CCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 2 (lower is better)
Translates to: PGLVLWACHRRVWAGRAELATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...CTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR GCA 90 bp TGGGTGACTGGGATCGCGCCAGTGCTCTGCTGCCGGGCGTCCAGGGCTCCAGCCTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 2 (lower is better)
Translates to: WVTGIAPVLCCRASRAPAWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...GGCTGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: GLVLWACHRRVWAGRAEGPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGMRGCR*LLGQGP
Trigger: TGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCAT...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CCA 90 bp GGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCGGAAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: GQLPARPHLGPWWSGLFGRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR TCA 90 bp GGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCGGATGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: GQLPARPHLGPWWSGLFGCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CCA 90 bp GGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: GLVLWACHRRVWAGRAEGLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 2 (lower is better)
Translates to: RGSAEFPLWPASSQASTGRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 2 (lower is better)
Translates to: MSIRSAAGSASLGALVVWLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 2 (lower is better)
Translates to: PQCCGARPEGTEEGWRARLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 2 (lower is better)
Translates to: PQCCGARPEGTEEGWRARHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CAA 90 bp ACACTGCTGGAGCCCAGGTTCATTCCTGCCAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: TLLEPRFIPASWDER*PVAAGSGPMSIRSA
Trigger: AGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAACCTGGGCTCCAGCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR TCA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: MSIRSAAGSASLGALVVWGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp CTGCCAGCTGGGATGAGAGGTTGCCGGTGGCTGCTGGGTCAGGGCCCATGTCGATTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: LPAGMRGCRWLLGQGPCRLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...TCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp TCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 2 (lower is better)
Translates to: SSRPEASRDCRPALTLLEPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...CTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp CCTCACGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PHVPTHHLQLTAQLPNLFSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...GAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: SGELRNASAQDWMRLSTLVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp ATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGGCAGGCCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 2 (lower is better)
Translates to: IITHVSGQPLLDVLHEAGLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GCCTGCCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: ICSGVGAMGVSPESMGGAWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 2 (lower is better)
Translates to: RGSAEFPLWPASSQASTGASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR TCA 90 bp TGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: CAASQSVPGLVLWACHRRGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...TCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR TCA 90 bp CTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: LIDGDHTCQIGRAAERVSGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...GCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR TCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 2 (lower is better)
Translates to: RGSAEFPLWPASSQASTGGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SGELRNASAQDWMRLSTLSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQLSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CAA 90 bp CCCTCAGCTGAGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGACC +
Preference number: 2 (lower is better)
Translates to: PSAEGLERLGNRSAA*ARSSRNLSNSSLVT
Trigger: GGTCACCAGCGAAGAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTCAGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR TCA 90 bp CATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: HLQLTAQLPNLFRGWCYGGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...CCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp CGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: RSHSPSPAHCAASQSVPGCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...CCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 2 (lower is better)
Translates to: RAARSHCSADLSPSSSHCASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGATGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp TCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCATCATTACCCACGTCAGTGGACCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 2 (lower is better)
Translates to: SSLVTPLGSSASLPTSVDPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GTCCACTGACGTGGGTAATGATGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 2 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTRPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: GCSWAGWSSPAHSPRSPGCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...GCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp CATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: HLQLTAQLPNLFRGWCYGSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...CCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPLQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR TCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR TCA 90 bp CCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCATGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: PVSAQTCQTHLPVDQRPPCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...TGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCGCTGACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR GCA 90 bp GGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GQPVSCPVSAQTCQTHLPAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...TGGAAGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp CAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QLPNLFRGWCYGRVTGEYSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...ATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp AACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 2 (lower is better)
Translates to: NASAQDWMRLSTLSCTMVVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...CACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CCA 90 bp CTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 2 (lower is better)
Translates to: LIFQSTRGLQRLQASSHTASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...AGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CCA 90 bp TCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 2 (lower is better)
Translates to: SSRPEASRDCRPALTLLERSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...CTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424387.5
3UTR-3UTR GCA 90 bp CTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 2 (lower is better)
Translates to: LIDGDHTCQIGRAAERVSDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...GCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR CCA 90 bp AGGTTGGGCAATCGGTCCGCGGCTTTGGCCCGTTCTTCCAGGAATTTGTCAAATTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: RLGNRSAALARSSRNLSNCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...ATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp GGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 2 (lower is better)
Translates to: GQPVSCPVSAQTCQTHLPSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...TGGAAGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CAA 90 bp GGCAACACAGTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATaGTTGAGATTGTCATTGACGATGAGCAGCTCCTCTGTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GNTVRPLSRSWRRNT*LRLSLTMSSSSVSC
Trigger: GCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCACTGTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CAA 90 bp AACACAGTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATTGTaGAGATTGTCATTGACGATGAGCAGCTCCTCTGTCAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: NTVRPLSRSWRRNTL*RLSLTMSSSSVSCS
Trigger: TGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCACTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR CAA 90 bp CCTGTTCGGAACCGTTCAAACCGTTCATGGCGCAGGAACACATTGTaGAGATTGTCATTGACGATGAGCAGCTCCTCTGTCAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: PVRNRSNRSWRRNTL*RLSLTMSSSSVSCS
Trigger: TGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGGTTTGAACGGTTCCGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424387.5
3UTR-3UTR GCA 90 bp TCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCACCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 2 (lower is better)
Translates to: SSRNLSNSSLVTPLGSSAPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...TGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGAATTTGACAAATTCCTGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CCA 90 bp AGGTTGGGCAATCGGTCCGCGGCTTTGGCCCGTTCTTCCAGGAATTTGTCAAATCTCGGAGGGCATCTTTaGGACTGTTTTGTGTATCCA +
Preference number: 2 (lower is better)
Translates to: RLGNRSAALARSSRNLSNLGGHL*DCFVYP
Trigger: TGGATACACAAAACAGTCCCAAAGATGCCCTCCGAG...ATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR TCA 90 bp GGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCATCTCTCTTGGGGATGTaGCTCTTGAACAGAATGATA +
Preference number: 2 (lower is better)
Translates to: GQPVSCPVSAQTCQTHLPSLLGM*LLNRMI
Trigger: TATCATTCTGTTCAAGAGTCACATCCCCAAGAGAGA...TGGAAGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCATGCTGCTAGCAGGGTaGTTTTCTACCTTTAATTGG +
Preference number: 2 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPMLLAG*FSTFNW
Trigger: CCAATTAAAGGTAGAAAACCACCCTGCTAGCAGCAT...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
3UTR-3UTR TCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 2 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 72 bp CAGGCCTGGGTGACTGGGATCGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCAGCCAGGCCGTCTGTT +
Preference number: 3 (lower is better)
Translates to: QAWVTGIAPVLC*RASRAPARPSV
Trigger: AACAGACGGCCTGGCTGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp TCTCGCCCACTGCGCGCAGAGTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACCT +
Preference number: 3 (lower is better)
Translates to: SRPLRAELQLRT*AAAAPQGASTP
Trigger: AGGTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGGGCGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR GCA 72 bp CCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCATaGTGGCCAGAGTCCTCTTGCTGGCTGGAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: PESMGGAGRGAA*WPESSCWLESV
Trigger: CACTGACTCCAGCCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR GCA 72 bp GGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTG +
Preference number: 3 (lower is better)
Translates to: GCWVRAHVDQVS*RLGLTWGLGGL
Trigger: CAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: MSIRSAAGSASLGALVVWARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp GACAGCCACTGCTCGATGTCCTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCAGTGCTCTGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: DSHCSMSSMRQA*VTGIAPVLCCR
Trigger: CCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGAGGACATCGAGCAGTGGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp TGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCA +
Preference number: 3 (lower is better)
Translates to: CAASQSVPGLVL*ACHRRVWAGRA
Trigger: TGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR GCA 72 bp GCGGGCAGAGGGGCAGCATGCTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCCACAGAATCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: AGRGAACWPESS*WLESVPTESCP
Trigger: AGGACAGGATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCTGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR GCA 72 bp CTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGAGAGTATGGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: LTAQLPNLFRGW*YGRVTGEYGRG
Trigger: GCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR CCA 72 bp CTCACACTGCTGGAGCCCAGGTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTGGCTGCTGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LTLLEPRFIPAS*DERLPVAAGSG
Trigger: CCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAACCTGGGCTCCAGCAGTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp CCTCCACACCCTACCCTCAGTGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGA +
Preference number: 3 (lower is better)
Translates to: PPHPTLSGQPKP*GPMQQSREGTR
Trigger: TCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CAA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 3 (lower is better)
Translates to: ICSGVGAMGVSPESMGGAVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CAA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR CCA 72 bp GGTTCATTCCTGCCAGCTGGGATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: GSFLPAGMRGCR*LLGQGPCRSGQ
Trigger: CTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp CTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCAAAGTCTCATGGTCAG +
Preference number: 3 (lower is better)
Translates to: LGQAASQPASLS*GLHFSAKSHGQ
Trigger: CTGACCATGAGACTTTGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CAA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 3 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp GCAGGCCTGGGTGACTGGGATCGCGCCAGTGCTCTGCTGCCGGGCGTCCAGGGCAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 3 (lower is better)
Translates to: AGLGDWDRASALLPGVQGNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...GCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp CCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: PVRSGELRNASAQDWMRLDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...CAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CAA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCATCTTTGGGACTGTTTaGTGTATCCAGCCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: GSGPMSIRSAAGSASLGAIFGTV*CIQPGS
Trigger: AGAACCTGGCTGGATACACAAAACAGTCCCAAAGAT...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: TRGSAEFPLWPASSQASTTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp ACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTCTTGACACAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: TLSTKSWLATST*KRCPQFLTQVS
Trigger: AGAAACCTGTGTCAAGAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CCA 72 bp GAGGGGCAGCATGCTGGCCAGAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAATCCTGTCCTGATTGTG +
Preference number: 3 (lower is better)
Translates to: EGQHAGQSPLAG*SQCPQNPVLIV
Trigger: CACAATCAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CAA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: AGYHSVKESHTGSSSQPATMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp ATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: IGRAAERVSPGLDEVEHFDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...AAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CAA 90 bp CGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 3 (lower is better)
Translates to: RSFPICSGVGAMGVSPESQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...ACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR GCA 72 bp TCTTCCGCATCATTACCCACGTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGGCAGGCCTGGGTGACT +
Preference number: 3 (lower is better)
Translates to: SSASLPTSVDSH*SMSSMRQAWVT
Trigger: AGTCACCCAGGCCTGCCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGATGCGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 72 bp CCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: PVQEDQPRGEPQ*CGARPEGTEEG
Trigger: TCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CCA 72 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCAT +
Preference number: 3 (lower is better)
Translates to: VCGWVTACPGQS*GTPGLSSAGPH
Trigger: ATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR-3UTR CAA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: LTISSSLRSFPICSGVGADCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR CCA 72 bp TGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCCAGGTCAGTCATGGGG +
Preference number: 3 (lower is better)
Translates to: CVSELNTVLWGV*MGDSMSRSVMG
Trigger: CCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
3UTR CCA 72 bp AGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTTaGCCCGTTCTTCCAGGAATTTGTCAAATTCTTCGC +
Preference number: 3 (lower is better)
Translates to: RGWRGWAIGPRL*PVLPGICQILR
Trigger: GCGAAGAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 3 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
3UTR-3UTR CAA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR-3UTR CAA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTSWDER*PVAAGS
Trigger: TGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR TCA 72 bp GGCTTCGTATTTTACCTCTTTCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGCAAACATGTCAAACTC +
Preference number: 3 (lower is better)
Translates to: GFVFYLFPLVSQ*AAPCQRKHVKL
Trigger: GAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAAATACGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 3 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR-3UTR CAA 90 bp ATCGGTCCGCGGCTTTGGCCCGTTCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 3 (lower is better)
Translates to: IGPRLWPVLPGICQILRWWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...CCAGCGAAGAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 72 bp CGTATTTTACCTCTTTCCGTTGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACATGTCAAACTCATCTT +
Preference number: 3 (lower is better)
Translates to: RILPLSVGQPVS*PVSAQTCQTHL
Trigger: AAGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAAATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR GCA 72 bp GTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACTGTTTTGTGTATC +
Preference number: 3 (lower is better)
Translates to: VEVLIPHDSLLY*SEGIFGTVLCI
Trigger: GATACACAAAACAGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR CCA 72 bp CAGGTTTCTAAGACTGTGAGAGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACGATTCTCTTCTTTACT +
Preference number: 3 (lower is better)
Translates to: QVSKTVRASITS*KFLFPTILFFT
Trigger: AGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR TCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCACCGACCCGTCACGTaGCGCACTCGGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGHRPVT*RTRRPA
Trigger: CGCCGGCCTCCGAGTGCGTCACGTGACGGGTCGGTG...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000425375.5
CDS-3UTR GCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPCRSGQLPARPHLGPWWAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...CCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGCCTGGGTGACTGGGATCGCGCCAGTGCTCTGCTGCCGGGCGTCCAGGGCCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGLGDWDRASALLPGVQGPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...GCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHPLVSQ*AAPCQR
Trigger: GCGCTGACACGGGGCAGCTCACTGGCTGACCAACGG...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASCCYRR*HQPRES
Trigger: TGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCA...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
CDS-3UTR GCA 90 bp CCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLVLWACHRRVWAGRAESDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...CTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGCCTGGGTGACTGGGATCGCGCCAGTGCTCTGCTGCCGGGCGTCCAGGGCCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: AGLGDWDRASALLPGVQGHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...GCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWALLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLVLWACHRRVWAGRAEGGQPKP*GPMQQS
Trigger: GCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCC...CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACACCGACCCGTCACGTaGCGCACTCGGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRHRPVT*RTRRPA
Trigger: CGCCGGCCTCCGAGTGCGTCACGTGACGGGTCGGTG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000425375.5
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWASRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGCWVRAHVDQVSCRLGLAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...GAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCAAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GAMGVSPESMGGAGRGAARGEPQ*CGARPE
Trigger: TTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCT...TGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GLVLWACHRRVWAGRAEGRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARLLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCGGAGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GQLPARPHLGPWWSGLFGGQPKP*GPMQQS
Trigger: GCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCC...TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGLQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGCGCAGATCTCCATGTTaGGGGCCCAGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PGLVLWACHRRVWAGRAERRSPC*GPSPRS
Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAGATCTGCG...CTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000439512.5
CDS-3UTR TCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWASCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACTGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTGCCAGCTGGGATGAGAGGTTGCCGGTGGCTGCTGGGTCAGGGCCCATGTCGAAGCTCCAGGACCCGCTaGTGCATGGCTCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: LPAGMRGCRWLLGQGPCRSSRTR*CMARHV
Trigger: CACGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCT...TCGACATGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGATCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGCCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: PGLVLWACHRRVWAGRAEPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...CTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCGGATCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GQLPARPHLGPWWSGLFGSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGCCTGTTCGGACCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQLPARPHLGPWWSGLFGPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSGPMSIRSAAGSASLGAPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
3UTR CAA 72 bp CTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGLMRSRPLRAE*QLRTWAAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCTGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QIGRAAERVSPGLDEVEHSCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...GTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGATCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCAGCTCCAGGACCCGCTaGTGCATGGCTCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGSSRTR*CMARHV
Trigger: CACGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGCAGTGGGGACCTGGGCTaGAGGGTGCCAGACCCCACA +
Preference number: 4 (lower is better)
Translates to: PVDQRPPETAGQLSHCWSSGDLG*RVPDPT
Trigger: TGTGGGGTCTGGCACCCTGCAGCCCAGGTCCCCACT...GCTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGCCCCAGTGCTGTGGTaGCCGGCCAGAAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAAPVLW*PARRNR
Trigger: TCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWARGEPQ*CGARPE
Trigger: TTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCT...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTGCAGGGAGCCATCTGTaGCTTTCTCGATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPAGSHL*LSRCAV
Trigger: GACAGCGCATCGAGAAAGCCACAGATGGCTCCCTGC...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MVTTPVRSGELRNASAQDLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCAGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GAMGVSPESMGGAGRGAAVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...TGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAATGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCGGCTCGGCCTCACTTaGGGCCTTGGTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCRLGLT*GLGGLA
Trigger: GGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCCGGCTCGGCCTCACTTaGGGCCTTGGTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPARLGLT*GLGGLA
Trigger: GGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCG...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAACGGCTCGGCCTCACTTaGGGCCTTGGTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQRLGLT*GLGGLA
Trigger: GGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCG...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAMRGCR*LLGQGP
Trigger: TGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCAT...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCAGTCTCATGGTCAGCTaGGGTGGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RAELQLRTWAAAAPQGASSLMVS*GGKGGR
Trigger: TCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACT...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CAA 72 bp GGCGGGCAGAGGGGCAGCATGCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCCCACAGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGQRGSMLARVL*LAGVSAHRILS
Trigger: GGACAGGATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCTGCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTCGCAGATCTCCATGTTaGGGGCCCAGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWARRSPC*GPSPRS
Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAGATCTGCG...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCACCCCGGGAATCAGCTaGCAGCAACCGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPATPGIS*QQPPAP
Trigger: TGGCGCTGGCGGTTGCTGTCAGCTGATTCCCGGGGT...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
CDS-3UTR TCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTCTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAACTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCAGCTGAGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTTGGCCCGTTCTTGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAEGLERLGNRSAALARSWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...AGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPASDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RMVLTSTLSTKSWLATSTSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...CGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAAGCTCCAGGACCCGCTaGTGCATGGCTCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRSSRTR*CMARHV
Trigger: CACGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCT...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCAGCTCCAGGACCCGCTaGTGCATGGCTCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCSSRTR*CMARHV
Trigger: CACGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCT...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCAGCTCCAGGACCCGCTaGTGCATGGCTCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLSSRTR*CMARHV
Trigger: CACGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCT...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGEASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAAGTGGGGACCTGGGCTaGAGGGTGCCAGACCCCACA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQSGDLG*RVPDPT
Trigger: TGTGGGGTCTGGCACCCTGCAGCCCAGGTCCCCACT...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGCCCCAGTGCTGTGGTaGCCGGCCAGAAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: HTCQIGRAAERVSPGLDEAPVLW*PARRNR
Trigger: TCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGC...CTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HTCQIGRAAERVSPGLDEPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...CTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCATGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GAMGVSPESMGGAGRGAAWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...TGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: GSGPMSIRSAAGSASLGAASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTCCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCGGCTCGGCCTCACTTaGGGCCTTGGTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTRLGLT*GLGGLA
Trigger: GGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCG...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPLLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCGQPKP*GPMQQS
Trigger: GCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCACCCCGGGAATCAGCTaGCAGCAACCGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVTPGIS*QQPPAP
Trigger: TGGCGCTGGCGGTTGCTGTCAGCTGATTCCCGGGGT...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
CDS-3UTR TCA 90 bp ATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTCTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IGRAAERVSPGLDEVEHFLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...AAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCTCGGCACGTGCGGTTaGGCTCCTGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTLGTCG*APAAAP
Trigger: TGGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAG...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWACSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPAPLVSQ*AAPCQR
Trigger: GCGCTGACACGGGGCAGCTCACTGGCTGACCAACGG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp ATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGCCGTCGAGCACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: MVTTPVRSGELRNASAQDCRRAL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTGCTCGACGGCA...GTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439512.5
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLCCYRR*HQPRES
Trigger: TGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCA...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
CDS-3UTR GCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPCCYRR*HQPRES
Trigger: TGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCA...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
CDS-3UTR GCA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGCTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLLWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIFQSTRGLQRLQASSHTIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...AGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GLFLGRMVLTSTLSTKSWLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...CCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTAGTGGGGACCTGGGCTaGAGGGTGCCAGACCCCACA +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTSGDLG*RVPDPT
Trigger: TGTGGGGTCTGGCACCCTGCAGCCCAGGTCCCCACT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGCCCCAGTGCTGTGGTaGCCGGCCAGAAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLAPVLW*PARRNR
Trigger: TCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGCCCCAGTGCTGTGGTaGCCGGCCAGAAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCAPVLW*PARRNR
Trigger: TCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPRGEPQ*CGARPE
Trigger: TTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCT...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLRGEPQ*CGARPE
Trigger: TTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCT...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSFPICSGVGAMGVSPESLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...ACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCATGCTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: AMGVSPESMGGAGRGAACCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...GCATGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGGGACTCACAACCTGTaGCCCCTGGACCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQGTHNL*PLDLQQ
Trigger: CTGCTGGAGGTCCAGGGGCCACAGGTTGTGAGTCCC...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPTHHLQLTAQLPNLFRGCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...ACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ATGGTGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: MVGGLFLGRMVLTSTLSTCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...CGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGGCAGGCCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: IITHVSGQPLLDVLHEAGLLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...GCCTGCCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGSSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPSSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GSGPMSIRSAAGSASLGALSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...GGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCCCAGCCAGCCTGTCCTaGGGCCTCCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAPASLS*GLHFSA
Trigger: TGCTGAGAAGTGGAGGCCCCAGGACAGGCTGGCTGG...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: GPMSIRSAAGSASLGALVGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...CACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCACCCCGGGAATCAGCTaGCAGCAACCGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPATPGIS*QQPPAP
Trigger: TGGCGCTGGCGGTTGCTGTCAGCTGATTCCCGGGGT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
CDS-3UTR TCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTTGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGATGGCGATCTGAGGGATaGGCTCCAGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CAASQSVPGLVLWACHRRWRSEG*APGPAA
Trigger: AGCAGCGGGTCCTGGAGCTCATCCCTCAGATCGCCA...TCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPASCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQLWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HTCQIGRAAERVSPGLDEAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...CTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGATGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAACTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: QDGPHQHTLHEVLAGHQHLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...GTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RSHSPSPAHCAASQSVPGVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...CCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLEASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTEASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQEASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLEASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGAGGCCTCCAGAGACTaGAGGCCAGCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPREASRD*RPALTL
Trigger: CAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTC...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGAGTGGGGACCTGGGCTaGAGGGTGCCAGACCCCACA +
Preference number: 4 (lower is better)
Translates to: GLFLGRMVLTSTLSTKSWSGDLG*RVPDPT
Trigger: TGTGGGGTCTGGCACCCTGCAGCCCAGGTCCCCACT...CCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCCACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGTTGGAGGGCCGAGAGGTaGCGTCGAGCACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GELQAFPPQVLIDGDHTCWRAER*RRAPFL
Trigger: GAGGAAGGGTGCTCGACGGCACCTCTCGGCCCTCCA...ACAGGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449508.1
CDS-3UTR CCA 90 bp ATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACGCAGGGAGCCATCTGTaGCTTTCTCGATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: MVTTPVRSGELRNASAQDAGSHL*LSRCAV
Trigger: GACAGCGCATCGAGAAAGCCACAGATGGCTCCCTGC...GTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGCAGGGAGCCATCTGTaGCTTTCTCGATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSAGSHL*LSRCAV
Trigger: GACAGCGCATCGAGAAAGCCACAGATGGCTCCCTGC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATGGTGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MVGGLFLGRMVLTSTLSTLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...CGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGACCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CGTTGGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RWSASELPRVSANMSNSSSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...AGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: QDGPHQHTLHEVLAGHQHGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...GTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTCACGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGCTCGGCCTCACTTaGGGCCTTGGTGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PHVPTHHLQLTAQLPNLFRLGLT*GLGGLA
Trigger: GGCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCG...GAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: RSHSPSPAHCAASQSVPGVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...CCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVMRGCR*LLGQGP
Trigger: TGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCAT...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGLFLGRMVLTSTLSTKSAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...GGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GPMSIRSAAGSASLGALVHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...CACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPAGQPKP*GPMQQS
Trigger: GCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCC...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GPMSIRSAAGSASLGALVRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...CACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp CGTTGGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: RWSASELPRVSANMSNSSPLVSQ*AAPCQR
Trigger: GCGCTGACACGGGGCAGCTCACTGGCTGACCAACGG...AGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp TTCCGCATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: FRIITHVSGQPLLDVLHEPLVSQ*AAPCQR
Trigger: GCGCTGACACGGGGCAGCTCACTGGCTGACCAACGG...CTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGATGCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTCCYRR*HQPRES
Trigger: TGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCA...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCCTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPALWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAACTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQLWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp GCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCATGCGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AMGVSPESMGGAGRGAACDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...GCATGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGATGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: NASAQDWMRLSTLSCTMVSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...CACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTGCTGGGATGAGAGGTTaGCGGTGGCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPAGMRG*RWLLGQ
Trigger: CTGACCCAGCAGCCACCGGCAACCTCTCATCCCAGC...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCCACTGCGCGCAGAGTTaGAGCTTCGTACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTHCAQS*SFVPGP
Trigger: CGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTGCCCCAGTGCTGTGGTaGCCGGCCAGAAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LTISSSLRSFPICSGVGAAPVLW*PARRNR
Trigger: TCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGGC...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGAGGTGAGCCCCAGTaGTGTGGTGCCCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPARGEPQ*CGARPE
Trigger: TTCTGGCCGGGCACCACAGCACTGGGGCTCACCTCT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLLGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: RRVTLGQAASQPASLSWGASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ICSGVGAMGVSPESMGGALNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: MVTTPVRSGELRNASAQDLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...GTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCACCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: IDGDHTCQIGRAAERVSPPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...TGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: HTCQIGRAAERVSPGLDENLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTCACTTGGGGCCTTGGTaGTCTGGCCTGTTCGGAACC +
Preference number: 4 (lower is better)
Translates to: RSFPICSGVGAMGVSPESHLGPW*SGLFGT
Trigger: GGTTCCGAACAGGCCAGACCACCAAGGCCCCAAGTG...ACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPAMRGCR*LLGQGP
Trigger: TGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCAT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCATCGGTCCGCGGCTTTaGCCCGTTCTTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGIGPRL*PVLPGI
Trigger: AATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGAT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPLLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGTCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRSSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCACACCCTACCCTCAGTaGCCAGCCAAAGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVTPYPQ*PAKAMG
Trigger: CCCCATGGCTTTGGCTGGCCACTGAGGGTAGGGTGT...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPALQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGCAGGTTTCTAAGACCTaGAGGGCCGAGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGELRNASAQDWMRLSTLQVSKT*RAERCR
Trigger: ACGGCACCTCTCGGCCCTCCAGGTCTTAGAAACCTG...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTCGCAGATCTCCATGTTaGGGGCCCAGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPRRSPC*GPSPRS
Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAGATCTGCG...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp GGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCGCAGATCTCCATGTTaGGGGCCCAGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GWVVLGQDGPHQHTLHEVRRSPC*GPSPRS
Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAGATCTGCG...GACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000439512.5
CDS-3UTR TCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QIGRAAERVSPGLDEVEHIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...GTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp TCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCATCATTACCCACGTCAGTGGACTGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SSLVTPLGSSASLPTSVDWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...GTCCACTGACGTGGGTAATGATGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFCCYRR*HQPRES
Trigger: TGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCA...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGACAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp CCTCACGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PHVPTHHLQLTAQLPNLFAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...GAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000439512.5
CDS-3UTR GCA 90 bp GAGTCCTCTTGCTGGCTGGAGTCAGTGCCCACAGAATCCTGTCCTGATTGTGTCTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ESSCWLESVPTESCPDCVSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...GACACAATCAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCAGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWAGWSSPAHSPRSPGWPAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...TGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTISSSLRSFPICSGVGAWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGTTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GELQAFPPQVLIDGDHTCWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...ACAGGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: LTISSSLRSFPICSGVGALFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: ICSGVGAMGVSPESMGGAPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CCTCACGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PHVPTHHLQLTAQLPNLFVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...GAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAATCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGCATCTTTGGGACGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVASLGR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGTCCCAAAGATGC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATCCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QLPNLFRGWCYGRVTGEYPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...ATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: ICSGVGAMGVSPESMGGACSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RMVLTSTLSTKSWLATSTSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...CGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: CAASQSVPGLVLWACHRRVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...TCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: IGRAAERVSPGLDEVEHFPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...AAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCTGTCACCGGAGAGTATaGGCGGGGCGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPCHRRV*AGRAEG
Trigger: CCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACA...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTCTGCGGGCTCGGCCTaGGTGGGCACCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSAGSA*VGTSSV
Trigger: GACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: GWVVLGQDGPHQHTLHEVGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...GACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCCCTCACTTGGGGCCTTaGTGGTCTGGCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTPHLGP*WSGLFG
Trigger: TCCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGG...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: WVVLGQDGPHQHTLHEVLVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...CAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGTTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGCTTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PVDQRPPETAGQLSHCWSFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...GCTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGTTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGRPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: KESHTGSSSQPASQPVLGHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCTTCTTCCGGGGCGCTaGGCCAGATGGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSLLPGR*ARWGTR
Trigger: CCGGGTCCCCCATCTGGCCCAGCGCCCCGGAAGAAG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAAGTCTCATGGTCAGCTaGGGTGGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQSLMVS*GGKGGR
Trigger: TCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACT...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQCCGARPEGTEEGWRARLSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGAAGGAGAGTCACACTaGGTCAAGCAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IDGDHTCQIGRAAERVSPEGESH*VKQPAS
Trigger: GCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTC...TGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WVGCSWAGWSSPAHSPRSLQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...ACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCCAGGTTTCTAAGACCTaGAGGGCCGAGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERQVSKT*RAERCR
Trigger: ACGGCACCTCTCGGCCCTCCAGGTCTTAGAAACCTG...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: MSIRSAAGSASLGALVVWRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp GGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGTGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GELQAFPPQVLIDGDHTCGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...ACAGGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCAGGAGGGAGGACTGCTTaGGGCCAAGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: SWAGWSSPAHSPRSPGWPGGRTA*GQEFET
Trigger: AGTCTCAAACTCTTGGCCTCAAGCAGTCCTCCCTCC...TGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR GCA 90 bp CTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LIDGDHTCQIGRAAERVSEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...GCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VPTHHLQLTAQLPNLFRGQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...ACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp AACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NASAQDWMRLSTLSCTMVAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...CACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000439512.5
CDS-3UTR GCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTCCAGGACCCGCTGCTaGATGGCTCGGCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSRTRC*MARHVR
Trigger: CCGCACGTGCCGAGCCATGCAGCAGCGGGTCCTGGA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCGCAGCCAGATCCCACTaGAGCGCAGACCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPAARSH*SADLSP
Trigger: GGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGC...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPALGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPLATST*KRCPQF
Trigger: GAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAG...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGATGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: SGELRNASAQDWMRLSTLCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCATGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SWAGWSSPAHSPRSPGWPWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...TGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp ATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IGRAAERVSPGLDEVEHFSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...AAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: RSFPICSGVGAMGVSPESASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...ACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LIDGDHTCQIGRAAERVSASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...GCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: SSRPEASRDCRPALTLLESPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...CTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGATTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: CAASQSVPGLVLWACHRRFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...TCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTTTCATTCCTGCCAGCTaGGATGAGAGGTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTFIPAS*DERLPV
Trigger: CACCGGCAACCTCTCATCCCAGCTGGCAGGAATGAA...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGTTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCCAGTCGACCAGAGGCCTCCAGAGACTGCAGGCCAGCTCTCACACTGCTGGAGAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 4 (lower is better)
Translates to: SSRPEASRDCRPALTLLERPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...CTCCAGCAGTGTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLRPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ATCGGTCCGCGGCTTTGGCCCGTTCTTCCAGGAATTTGTCAAATTCTTCGCTGGGCAGGCCTGGGTGACTaGGATCGCGCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IGPRLWPVLPGICQILRWAGLGD*DRASAL
Trigger: CAGAGCACTGGCGCGATCCCAGTCACCCAGGCCTGC...CCAGCGAAGAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGATCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRSSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCACCCCCAGCCACAGCTaGGGCAGCTCCGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFTPSHS*GSSVFK
Trigger: TTTGAAGACGGAGCTGCCCCAGCTGTGGCTGGGGGT...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTAGTCTCATGGTCAGCTaGGGTGGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRGSAEFPLWPASSQASTSLMVS*GGKGGR
Trigger: TCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCAGTCTCATGGTCAGCTaGGGTGGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVSLMVS*GGKGGR
Trigger: TCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACT...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCLSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTLSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR TCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCAATTGTGTCTCTGAGTTaGACACGGTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SWAGWSSPAHSPRSPGWPIVSLS*TRSSGV
Trigger: CACCCCAGAGGACCGTGTTCAACTCAGAGACACAAT...TGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR TCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGTGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GELQAFPPQVLIDGDHTCEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...ACAGGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WVVLGQDGPHQHTLHEVLQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...CAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCAGGAGAAAGTCCATTaGTGCTACCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFQEKVH*CYRRCH
Trigger: GTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTG...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTCAGATCGGGCGAGCTaGGGAACGCGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSDRAS*GTRQPR
Trigger: CCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GAGTCCTCTTGCTGGCTGGAGTCAGTGCCCACAGAATCCTGTCCTGATTGTGTCCTGTTCCGGGGTTGGTaGTATGGGCGTGTCACCGGA +
Preference number: 4 (lower is better)
Translates to: ESSCWLESVPTESCPDCVLFRGW*YGRVTG
Trigger: TCCGGTGACACGCCCATAGCACCAACCCCGGAACAG...GACACAATCAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp CGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACTGTGAGAGCCAGCATCACCGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: RCPQFLTQVSKTVRASITGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...GGTGATGCTGGCTCTCACAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp TCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCAATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSRNLSNSSLVTPLGSSAIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...TGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGAATTTGACAAATTCCTGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp CATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: HLQLTAQLPNLFRGWCYGSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...CCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTGCAGGGAGCCATCTGTaGCTTTCTCGATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLAGSHL*LSRCAV
Trigger: GACAGCGCATCGAGAAAGCCACAGATGGCTCCCTGC...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCAGGGAGCCATCTGTaGCTTTCTCGATGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: WVVLGQDGPHQHTLHEVLAGSHL*LSRCAV
Trigger: GACAGCGCATCGAGAAAGCCACAGATGGCTCCCTGC...CAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000439512.5
CDS-3UTR CCA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLLGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395736.7
ENST00000439512.5
CDS-3UTR CCA 90 bp TCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCAGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SWAGWSSPAHSPRSPGWPASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...TGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTGTCCTCTGGGGTGTGTaGATGGGTGACAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLVLWGV*MGDSMS
Trigger: GGACATGCTGTCACCCATCCACACACCCCAGAGGAC...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLQLTAQLPNLFRGWCYGLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...CCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTGCGTCAGCCCAGGACTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LTISSSLRSFPICSGVGAASAQD*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGC...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGGGTGGCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: VSPGLDEVEHFVMHDGGWPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...CCACCCACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TTCCGCATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FRIITHVSGQPLLDVLHERGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...CTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGATGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp ATGGTGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: MVGGLFLGRMVLTSTLSTNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCATGAGAGGTTGCCGGTaGCTGCTGGGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPMRGCR*LLGQGP
Trigger: TGGGCCCTGACCCAGCAGCCACCGGCAACCTCTCAT...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGGGGCTGGAGAGGTTaGGCAATCGGTCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPRGWRG*AIGPRL
Trigger: AAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTGGGCTCCTTGGGGCATaGGCCCGGAGCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSGLLGA*ARSRVS
Trigger: TGATACCCTGCTCCGGGCCCATGCCCCAAGGAGCCC...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TTCCGCATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGCCTCGACTGGCAGTGTaGGCTCTGAAGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FRIITHVSGQPLLDVLHEPRLAV*ALKGSL
Trigger: CAAGGAGCCCTTCAGAGCCCACACTGCCAGTCGAGG...CTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGATGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp ATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: ICSGVGAMGVSPESMGGARSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...CGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR CCA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: RGSAEFPLWPASSQASTGRSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LTISSSLRSFPICSGVGAGARSS*HRFLRP
Trigger: AGGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439512.5
CDS-3UTR TCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACCT +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTGARSS*HRFLRP
Trigger: AGGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTGCCCAGTCCTCGCTCTaGAGGGAGCCATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSAQSSL*REPSVA
Trigger: AGCCACAGATGGCTCCCTGCAGAGCGAGGACTGGGC...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RAARSHCSADLSPSSSHCDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGTGGCCAGAGTCCTCTTaGTGGCTGGAGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQWPESS*WLESVP
Trigger: GGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCA...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR GCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPAPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCGCGCCAGTGCTCTGCTaGCGGGCGTCCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTAPVLC*RASRAP
Trigger: TGGAGCCCTGGACGCCCGGCAGCAGAGCACTGGCGC...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: NASAQDWMRLSTLSCTMVLGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...CACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439512.5
CDS-3UTR CCA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTGTTCTTGGGCAGGATaGTCCTCACCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPCSWAG*SSPAHS
Trigger: AGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACA...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCTCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp ATGGTGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: MVGGLFLGRMVLTSTLSTSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...CGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp GGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: GWVVLGQDGPHQHTLHEVSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...GACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp AACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGCCAGAGTCCTCTTGCTaGCTGGAGTCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: NASAQDWMRLSTLSCTMVPESSC*LESVPT
Trigger: TGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGG...CACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCCCGGGGTTGGTGCTATaGGCGTGTCACCGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPPGLVL*ACHRRV
Trigger: TACTCTCCGGTGACACGCCCATAGCACCAACCCCGG...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCCCCTGTCTCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: GWVVLGQDGPHQHTLHEVPLSRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGAGACAGGGG...GACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCTTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCTCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPASSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPALSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGTTTTCTACCTTTAATTaGGGATACAAAAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGFSTFN*GYKRHL
Trigger: GAGGTGCCTTTTGTATCCCCAATTAAAGGTAGAAAA...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTTTTTCTACCTTTAATTaGGGATACAAAAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPFSTFN*GYKRHL
Trigger: GAGGTGCCTTTTGTATCCCCAATTAAAGGTAGAAAA...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: VKESHTGSSSQPASQPVLRSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLRSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTATGCTGCTAGCAGGGTaGTTTTCTACCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAMLLAG*FSTFNW
Trigger: CCAATTAAAGGTAGAAAACCACCCTGCTAGCAGCAT...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
CDS-3UTR CCA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGAGTTGAACACGGTCTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: GQEARQNFHCGQPPARPRELNTV*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGACCGTGTTCAACTC...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425375.5
3UTR CAA 72 bp GAGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAATTTGTCAAATTCTTCG +
Preference number: 4 (lower is better)
Translates to: EGLERLGNRSAA*ARSSRNLSNSS
Trigger: CGAAGAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPARFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: QLPNLFRGWCYGRVTGEYGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...ATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGCCGTTGGTCAGCCAGTaGGCTGCCCCGTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKPLVSQ*AAPCQR
Trigger: GCGCTGACACGGGGCAGCTCACTGGCTGACCAACGG...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTCTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGLWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGCTGTGGCTTTCTCGATaGGCTGTCCCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMLWLSR*AVPLES
Trigger: GCTCTCCAGTGGGACAGCGCATCGAGAAAGCCACAG...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RSFPICSGVGAMGVSPESDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...ACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SVKESHTGSSSQPASQPVDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCATCTCCAGCTCACTaGGCAGCTTCCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: WVGCSWAGWSSPAHSPRSPSPAH*AASQSV
Trigger: AACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGG...ACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTGGTCAGCCAGTGAGCTaGCCCGTGTCAGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSGQPVS*PVSAQT
Trigger: TGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACC...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCCTGGGATCGCGCCAGTaGTCTGCTGCCGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTLGSRQ*SAAGRP
Trigger: TGGACGCCCGGCAGCAGAGCACTGGCGCGATCCCAG...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPLGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCACCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSRNLSNSSLVTPLGSSAPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...TGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGAATTTGACAAATTCCTGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TTCCGCATCATTACCCACGTCAGTGGACAGCCACTGCTCGATGTCCTCCATGAGTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: FRIITHVSGQPLLDVLHEWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...CTCATGGAGGACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATGATGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCAGATCGGGCGAGCTaGATGAGGTTGAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLSDRAS*MRLSTL
Trigger: CAAAGTGCTCAACCTCATCCAGCTCGCCCGATCTGA...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395736.7
CDS-3UTR CCA 90 bp CAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATTCATCATCTTTCTCCTaGGTCTTCTTCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: QLPNLFRGWCYGRVTGEYSSSFS*VFFRGA
Trigger: AGCGCCCCGGAAGAAGACCCAGGAGAAAGATGATGA...ATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAATCTCTCTTGGGGATGTaGCTCTTGAACAGAATGATA +
Preference number: 4 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQSLLGM*LLNRMI
Trigger: TATCATTCTGTTCAAGAGTCACATCCCCAAGAGAGA...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR TCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTSCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTCCTGCCAGCTGGGATaGGAGGTTGCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKSCQLG*EVAGGC
Trigger: GCAGCCACCGGCAACCTCTCATCCCAGCTGGCAGGA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR GCA 90 bp ATGGTGGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: MVGGLFLGRMVLTSTLSTDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...CGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAATCGCGCCAGTGCTCTaGTGCCGGGCGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQIAPVL*CRASRA
Trigger: AGCCCTGGACGCCCGGCAGCAGAGCACTGGCGCGAT...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCTCAGTGGACAGCCACTaGTCGATGTCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPSVDSH*SMSSMR
Trigger: CCTCATGGAGGACATCGAGCAGTGGCTGTCCACTGA...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAGTGGGGACCTGGGCTaGAGGGTGCCAGACCCCACA +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTSGDLG*RVPDPT
Trigger: TGTGGGGTCTGGCACCCTGCAGCCCAGGTCCCCACT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCTCGGAGGGCATCTTTaGGACCTTCCTCCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSLGGHL*DLPPSR
Trigger: ACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTTGTCCAGGTCAGTCATaGGGAACTCCAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGCPGQS*GTPGLS
Trigger: GGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACA...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp CAACACAGTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATTGTTGAGATTACAACCTGTGGCCCCTaGACCTCCAGCAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QHSETPVSFMAQEHIVEITTCGP*TSSSRV
Trigger: GACTCTGCTGCTGGAGGTCCAGGGGCCACAGGTTGT...AATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCACTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp CGTTGGTCAGCCAGTGAGCTGCCCCGTGTCAGCGCAAACATGTCAAACTCATCTAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 4 (lower is better)
Translates to: RWSASELPRVSANMSNSSRPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...AGATGAGTTTGACATGTTTGCGCTGACACGGGGCAGCTCACTGGCTGACCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGAGTCTCATGGTCAGCTaGGGTGGGAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQSLMVS*GGKGGR
Trigger: TCTGCCTCCTTTCCCACCCCAGCTGACCATGAGACT...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCGTTCAAACCGTTCATaGCGCAGGAACACATTGTTG +
Preference number: 4 (lower is better)
Translates to: AGYHSVKESHTGSSSQPARSNRS*RRNTLL
Trigger: CAACAATGTGTTCCTGCGCCATGAACGGTTTGAACG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTATGCTGCTAGCAGGGTaGTTTTCTACCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: QATPKAALTPEEGGRSQPMLLAG*FSTFNW
Trigger: CCAATTAAAGGTAGAAAACCACCCTGCTAGCAGCAT...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
CDS-3UTR TCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTGGTGCCCGCAGTTCTTaGCACAGGTTTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGGARSS*HRFLRL
Trigger: CAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACC...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp CAACACAGTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATTGTTGAGATTGGGTGTGTGGATGGGTaGCAGCATGTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QHSETPVSFMAQEHIVEIGCVDG*QHVQVS
Trigger: ACTGACCTGGACATGCTGTCACCCATCCACACACCC...AATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCACTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR TCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp GTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VCGWVTACPGQSWGTPGLDSLLY*SEGIFG
Trigger: CCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATC...AAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR GCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKVDQVS*RLGLTW
Trigger: CCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGAC...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCAGAATGATACAAGGTaGGCAGGTGGGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSQNDTR*AGGCGG
Trigger: GCCACCACACCCACCTGCCCACCTTGTATCATTCTG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGTTGCCGGTGGCTGCTaGGTCAGGGCCCATGTCGAT +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKVAGGC*VRAHVD
Trigger: ATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTCCATGAGGCAGGCCTaGGTGACTGGGATCGCGCCA +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKSMRQA*VTGIAP
Trigger: TGGCGCGATCCCAGTCACCCAGGCCTGCCTCATGGA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTATCGGTCCGCGGCTTTaGCCCGTTCTTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSIGPRL*PVLPGI
Trigger: AATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGAT...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGCCAGCCAAAGCCATaGGGCCCCATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQGQPKP*GPMQQS
Trigger: GCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCC...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCTTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTLQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTAGGTTTCTAAGACTGTaGGAGCCAGCATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGRFLRL*EPASPR
Trigger: ACGAGGTGATGCTGGCTCTCACAGTCTTAGAAACCT...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
CDS-3UTR TCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATGGCAGTGTGGGCTCTaGAGGGCTCCTTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQWQCGL*RAPWGM
Trigger: CATGCCCCAAGGAGCCCTTCAGAGCCCACACTGCCA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAACCCAGTTCATCCCACTaGCTCCACACCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQPSSSH*LHTPSH
Trigger: GTGGCTGGGGGTGTGGAGGCAGTGGGATGAACTGGG...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAACCACGAAGTCCTGGCTaGCCACCAGCACGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQPRSPG*PPARGS
Trigger: GCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGG...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTAGGCCGTCTGTTGCTTaGGGGGCTTCGTATTTTACC +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSRPSVA*GASYFT
Trigger: GGTAAAATACGAAGCCCCCCAAGCAACAGACGGCCT...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCTCAGCAAAGTCTCATaGTCAGCTGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSLSKVS*SAGVGK
Trigger: CTTTCCCACCCCAGCTGACCATGAGACTTTGCTGAG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATTGCAGCTTCGTACCTaGGCCGCCGCAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQLQLRT*AAAAPQ
Trigger: CTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTTTTCTACCTTTAATTaGGGATACAAAAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAFSTFN*GYKRHL
Trigger: GAGGTGCCTTTTGTATCCCCAATTAAAGGTAGAAAA...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCTTTTCTACCTTTAATTaGGGATACAAAAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: RDKRLGRISTVASLQPGLFSTFN*GYKRHL
Trigger: GAGGTGCCTTTTGTATCCCCAATTAAAGGTAGAAAA...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAACGCAGATCTCCATGTTaGGGGCCCAGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQRRSPC*GPSPRS
Trigger: AGAGCGAGGACTGGGCCCTCAACATGGAGATCTGCG...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR TCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTGCTCATTGGCGATCTaGGGGATGAGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKCSLAI*GMSSRT
Trigger: GGTCCTGGAGCTCATCCCTCAGATCGCCAATGAGCA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR GCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCGCTGGCTGGAGTCAGTaGCCACAGAATCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTAGWSQ*PQNPVL
Trigger: CAGGACAGGATTCTGTGGGCACTGACTCCAGCCAGC...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CAACACAGTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATTGTTGAGATTGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACG +
Preference number: 4 (lower is better)
Translates to: QHSETPVSFMAQEHIVEIASITS*KFLFPT
Trigger: CGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGC...AATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCACTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAAGAGGGGCAGCATGCTaGCCAGAGTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQRGAAC*PESSCW
Trigger: CCAGCAAGAGGACTCTGGCCAGCATGCTGCCCCTCT...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGGGCCTTGGTGGTCTaGCCTGTTCGGAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQGALVV*PVRNRS
Trigger: TGAACGGTTCCGAACAGGCCAGACCACCAAGGCCCC...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CAA 72 bp CTGTCTCGTTCATGGCGCAGGAACACATTGTTGAGATaGTCATTGACGATGAGCAGCTCCTCTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSRSWRRNTLLR*SLTMSSSSVSC
Trigger: GCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR CAA 72 bp AGACCCCTGTCTCGTTCATGGCGCAGGAACACATTGTaGAGATTGTCATTGACGATGAGCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RPLSRSWRRNTL*RLSLTMSSSSV
Trigger: GACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
3UTR CAA 72 bp GTGAGACCCCTGTCTCGTTCATGGCGCAGGAACACATaGTTGAGATTGTCATTGACGATGAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRPLSRSWRRNT*LRLSLTMSSSS
Trigger: AGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAGGGGTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR GCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGAGAAAGTCCATTGCTaGTACCGCCGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKEKVHC*YRRCHQ
Trigger: TTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTC...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCTTGAACACGGTCCTCTaGGGTGTGTGGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTLNTVL*GVWMGD
Trigger: GTCACCCATCCACACACCCCAGAGGACCGTGTTCAA...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAATCTGTTCCGGGGTTaGTGCTATGGGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKNLFRG*CYGRVT
Trigger: GGTGACACGCCCATAGCACCAACCCCGGAACAGATT...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCATCGGTCCGCGGCTTTaGCCCGTTCTTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTIGPRL*PVLPGI
Trigger: AATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGAT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CAA 72 bp TCAAACCGTTCATGGCGCAGGAACACATTGTTGAGATaGTCATTGACGATGAGCAGCTCCTCTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNRSWRRNTLLR*SLTMSSSSVSC
Trigger: GCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424387.5
3UTR CAA 72 bp CGGAACCGTTCAAACCGTTCATGGCGCAGGAACACATaGTTGAGATTGTCATTGACGATGAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RNRSNRSWRRNT*LRLSLTMSSSS
Trigger: AGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGGTTTGAACGGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATGGGTGGGTTGTTCTTaGGCAGGATGGTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQWVGCS*AGWSSP
Trigger: TGGTGAGGACCATCCTGCCCAAGAACAACCCACCCA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATCTGGGGTGTGTGGATaGGTGACAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQSGVCG*VTACPG
Trigger: ACCTGGACATGCTGTCACCCATCCACACACCCCAGA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGTCCTCTTGCTGGCTaGAGTCAGTGCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKSPLAG*SQCPQN
Trigger: ATTCTGTGGGCACTGACTCCAGCCAGCAAGAGGACT...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCCATTACCCACGTCAGTaGACAGCCACTGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTHYPRQ*TATARC
Trigger: ACATCGAGCAGTGGCTGTCCACTGACGTGGGTAATG...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
3UTR CAA 72 bp AACCGTTCAAACCGTTCATGGCGCAGGAACACATTGTaGAGATTGTCATTGACGATGAGCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NRSNRSWRRNTL*RLSLTMSSSSV
Trigger: GACAGAGGAGCTGCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGGTTTGAACGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR TCA 90 bp TCTTCCAGGAATTTGTCAAATTCTTCGCTGGTGACCCCCTTAGGCTCTTCCGCATATCCAGCCAGGTTCTaGTCACATCAGAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSRNLSNSSLVTPLGSSAYPARF*SHQNLP
Trigger: AGGAAGATTCTGATGTGATCAGAACCTGGCTGGATA...TGCGGAAGAGCCTAAGGGGGTCACCAGCGAAGAATTTGACAAATTCCTGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp CTGTCTCGTTCATGGCGCAGGAACACATTGTTGAGATTGTCATTGACGATGAGCCTCGGAGGGCATCTTTaGGACTGTTTTGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: LSRSWRRNTLLRLSLTMSLGGHL*DCFVYP
Trigger: TGGATACACAAAACAGTCCCAAAGATGCCCTCCGAG...GCTCATCGTCAATGACAATCTCAACAATGTGTTCCTGCGCCATGAACGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CCA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATTTACCTCTTTCCGTTaGTCAGCCAGTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQFTSFR*SASELP
Trigger: GGGCAGCTCACTGGCTGACCAACGGAAAGAGGTAAA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CCA 90 bp CCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCATTTTCTACCTTTAATTaGGGATACAAAAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: PVSAQTCQTHLPVDQRPPFSTFN*GYKRHL
Trigger: GAGGTGCCTTTTGTATCCCCAATTAAAGGTAGAAAA...TGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCGCTGACACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CCA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTATGCTGCTAGCAGGGTaGTTTTCTACCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSMLLAG*FSTFNW
Trigger: CCAATTAAAGGTAGAAAACCACCCTGCTAGCAGCAT...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
CDS TCA 90 bp AGGAGCTGCGGAAGCTGGGCTGGCCGGGCCAACCCGGAAACAGCCTaGGCCCTGGGGTCCCGCAAGACCCTCAGCTGCCCCTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RSCGSWAGRANPETA*ALGSRKTLSCPSLL
Trigger: GAGCAAGGAGGGGCAGCTGAGGGTCTTGCGGGACCCCAGGGCTCAGGCTGTTTCCGGGTTGGCCCGGCCAGCCCAGCTTCCGCAGCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS GCA 90 bp GTTGCCGGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGGGGCCTGGTGGGAAGGGAGATGCCC +
Preference number: 5 (lower is better)
Translates to: VAGGCWVRAHVDQVS*RLGLTWGLVGREMP
Trigger: GGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACCGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS-3UTR CAA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: RAELQLRTWAAAAPQGASSWDER*PVAAGS
Trigger: TGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCT...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: KESHTGSSSQPASQPVLGPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPSWDER*PVAAGS
Trigger: TGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCT...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GAGGAGGGAGGGAGGTCCCAGCCTAAGGGTGTGAGAGCAGTGGGGACCTGGGCTGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: EEGGRSQPKGVRAVGTWAEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...AGCCCAGGTCCCCACTGCTCTCACACCCTTAGGCTGGGACCTCCCTCCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS TCA 90 bp AGTCCATTGCTGCTACCGCCGCTGCCACCAACCCCGGGAATCAGCTaGCAGCAACCGCCAGCGCCACCGACCCGTCACGTGACGCACTCG +
Preference number: 5 (lower is better)
Translates to: SPLLLPPLPPTPGIS*QQPPAPPTRHVTHS
Trigger: CGAGTGCGTCACGTGACGGGTCGGTGGCGCTGGCGGTTGCTGTCAGCTGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCAATGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000456128.5
CDS-3UTR CAA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCAGGAGAAAGTCCATaGCTGCTACCGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGPGESP*LLPPLP
Trigger: TGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGG...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VKESHTGSSSQPASQPVLPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: MSIRSAAGSASLGALVVWEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS GCA 90 bp GGAGCCGACTTCCCAGCAGCAGTGGCAACAGCAAGTGCCCAGCTGTaGACACCGGCTCCGTCTCCCGCTCCGCTATCCCCATCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GADFPAAVATASAQL*TPAPSPAPLSPSPL
Trigger: AAGAGGCGATGGGGATAGCGGAGCGGGAGACGGAGCCGGTGTGCACAGCTGGGCACTTGCTGTTGCCACTGCTGCTGGGAAGTCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SGELRNASAQDWMRLSTLARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GQEARQNFHCGQPPARPRARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: KESHTGSSSQPASQPVLGASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...CCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: RDKRLGRISTVASLQPGLALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RGSAEFPLWPASSQASTGPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS TCA 90 bp ACTCAGTCAGCCGGCCTCCCTGCCCCCGCGGAGGCCTGGGTTTACTaGGCTTCAATGTCACCCACAGGTCCTTTGGCCCAGGCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TQSAGLPAPAEAWVY*ASMSPTGPLAQALP
Trigger: AGGGAGAGCCTGGGCCAAAGGACCTGTGGGTGACATTGAAGCTCAGTAAACCCAGGCCTCCGCGGGGGCAGGGAGGCCGGCTGACTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 90 bp TCAGCTGCCGGCTCGGCCTCACTTGGGGCCTGGTGGGAAGGGAGATaGCCTGATCATCCCCGCTGTCTGCAGCTTCGTTCCTTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SAAGSASLGAWWEGR*PDHPRCLQLRSFLP
Trigger: GGGCAGAAAGGAACGAAGCTGCAGACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS CCA 90 bp CCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTaGTGGGAAGGGAGATGCCCTGATCATCCCCGCTGTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PMSIRSAAGSASLGA*WEGRCPDHPRCLQL
Trigger: AAGCTGCAGACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS-3UTR CAA 90 bp TCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: SVPGLVLWACHRRVWAGRVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...CCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: RAELQLRTWAAAAPQGASDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: RAELQLRTWAAAAPQGASQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...GGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RGSAEFPLWPASSQASTGLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SVKESHTGSSSQPASQPVARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGCTCGGCACGTGCGGTaGAGCTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTARHVR*SSCSSS
Trigger: GGAGCTGCTGCAGGAGCTCAACCGCACGTGCCGAGC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: QATPKAALTPEEGGRSQPASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTCCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LTISSSLRSFPICSGVGAPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp TTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: FLGRMVLTSTLSTKSWLAALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...GGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RAARSHCSADLSPSSSHCPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCAGTGGCCAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAACCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SVASQSHGAPCSRAGKGQPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...TTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTGGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS GCA 90 bp ACACCGGCTCCGTCTCCCGCTCCGCTATCCCCATCGCCTCTTAGCTaGCAGACGGGCTACCTTGTCCTTGCCCGAGACTCAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TPAPSPAPLSPSPLS*QTGYLVLARDSRAG
Trigger: TCCTGCTCTTGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATGGGGATAGCGGAGCGGGAGACGGAGCCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTGGTaGGAAGGGAGATGCCCTGATCATCCCCGCTGTCTGCAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: MSIRSAAGSASLGAW*EGRCPDHPRCLQLR
Trigger: ACGAAGCTGCAGACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS-3UTR CAA 90 bp ATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: MVTTPVRSGELRNASAQDSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...GTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGAGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: GQEARQNFHCGQPPARPRARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: RDKRLGRISTVASLQPGLARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGTCTGGGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: MSIRSAAGSASLGALVVWVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...CCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp AGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGGCGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: RGSAEFPLWPASSQASTGVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...GCCAGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: GDHTCQIGRAAERVSPGLTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...CAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGTGGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: GGCWVRAHVDQVSCRLGLQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...GAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ATCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: IGRAAERVSPGLDEVEHFASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...AAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp CGTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RSHSPSPAHCAASQSVPGPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...CCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCCCAGGAGAAAGTCCATaGCTGCTACCGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RDKRLGRISTVASLQPGLPGESP*LLPPLP
Trigger: TGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGG...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCGGGCGAGCTGCGGAACGCGTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGCCAGGAGAAAGTCCATaGCTGCTACCGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SGELRNASAQDWMRLSTLPGESP*LLPPLP
Trigger: TGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGG...CAAAGTGCTCAACCTCATCCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RAARSHCSADLSPSSSHCSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CACTGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: HCAQSCSFVPGPPQLLRGMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...CCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: PQCCGARPEGTEEGWRARQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCACCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PVSAQTCQTHLPVDQRPPPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...TGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCGCTGACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSNRSAA*ARSSRN
Trigger: ATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATT...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQNRSAA*ARSSRN
Trigger: ATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATT...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS TCA 90 bp AAACCCATGCTGACGGCTAGGAGGCCCACGTGTGTCTGGCCGCCCTaGGATCTGGGCTGGTTCAGTGGTGTGGGCAAGACTGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: KPMLTARRPTCVWPP*DLGWFSGVGKTVLS
Trigger: GCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACACGTGGGCCTCCTAGCCGTCAGCATGGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS-3UTR CAA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395736.7
ENST00000439512.5
CDS-3UTR CAA 90 bp GGGGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GVCGWVTACPGQSWGTPGVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...GCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp TCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: SVKESHTGSSSQPASQPVVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...GACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: RDKRLGRISTVASLQPGLTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGCCCATGTCGATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTTGGTGGATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GPCRSGQLPARPHLGPWWMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...CCACCAAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GTTCCCACTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VPTHHLQLTAQLPNLFRGLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...ACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAGTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp GGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GCSWAGWSSPAHSPRSPGLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...GCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: GQEARQNFHCGQPPARPRQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACCAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: QDGPHQHTLHEVLAGHQHQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...GTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp AGGGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCCAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: RDKRLGRISTVASLQPGLQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...GAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTCACCATCTCCAGCTCACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LTISSSLRSFPICSGVGASWDER*PVAAGS
Trigger: TGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCT...AGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGTGAGCTGGAGATGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: VKESHTGSSSQPASQPVLNRSAA*ARSSRN
Trigger: ATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATT...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CCCGTGTCAGCGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: PVSAQTCQTHLPVDQRPPEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...TGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCGCTGACACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp CGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACTGTGAGAGCCAGCATCACCGCTCTGAAGGGCTCCTaGGGGCATGGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: RCPQFLTQVSKTVRASITALKGS*GHGPGA
Trigger: TGCTCCGGGCCCATGCCCCAAGGAGCCCTTCAGAGC...GGTGATGCTGGCTCTCACAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp TGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGCCACTGCGCGCAGAGTaGCAGCTTCGTACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WVVLGQDGPHQHTLHEVLPLRAE*QLRTWA
Trigger: GGCCCAGGTACGAAGCTGCAACTCTGCGCGCAGTGG...CAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS TCA 90 bp AGGAGGGTGGGACAGCATTTATATCTTCCCCAGCCAAACCCATGCTaGCGGCTAGGAGGCCCACGTGTGTCTGGCCGCCCTGAGATCTGG +
Preference number: 5 (lower is better)
Translates to: RRVGQHLYLPQPNPC*RLGGPRVSGRPEIW
Trigger: CCAGATCTCAGGGCGGCCAGACACACGTGGGCCTCCTAGCCGTCAGCATGGGTTTGGCTGGGGAAGATATAAATGCTGTCCCACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 90 bp CTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: LTSTLSTKSWLATST*KRCPQFLTQVSKTW
Trigger: CCAGGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439512.5
ENST00000449508.1
CDS CCA 90 bp CTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGTaGAAGCGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACCTCG +
Preference number: 5 (lower is better)
Translates to: LTSTLSTKSWLATST*KRCPQFLTQVSKTS
Trigger: CGAGGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCGCTTCCACGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456128.5
CDS CCA 90 bp AAGACATGGGCTGTGCCACGATGGCTCCCACACAGGGGCAGGAGTTaGAGGCTTTCCTCTCTAACGGCTTCTGCAGGGGCAGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: KTWAVPRWLPHRGRS*RLSSLTASAGADSS
Trigger: ACTGGAGTCTGCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 90 bp GGCGGTGCTACAGATGGGGACATTTCACTTTCGGCCACAAAGACATaGGCTGTGCCACGATGGCTCCCACACAGGGGCAGGAGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GGATDGDISLSATKT*AVPRWLPHRGRSWR
Trigger: CCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCCATCTGTAGCACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 90 bp CCAGACAAGGCCAGGTGGGTAGACCCAGAGGGGCGGTGCTACAGATaGGGACATTTCACTTTCGGCCACAAAGACATGGGCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: PDKARWVDPEGRCYR*GHFTFGHKDMGCAT
Trigger: CGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCCATCTGTAGCACCGCCCCTCTGGGTCTACCCACCTGGCCTTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: AGYHSVKESHTGSSSQPASQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCGCTCGGAGGGCATCTTaGGGACCTTCCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLARRAS*GPSSVS
Trigger: CGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGC...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395736.7
ENST00000439512.5
CDS-3UTR CAA 90 bp GGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GLFLGRMVLTSTLSTKSWVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...CCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp CAGGTCCTCATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: QVLIDGDHTCQIGRAAERTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...GCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTATGAGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGGCTCGGAGGGCATCTTaGGGACTGTTTTGTGTATCC +
Preference number: 5 (lower is better)
Translates to: PQCCGARPEGTEEGWRARARRAS*GLFCVS
Trigger: GGATACACAAAACAGTCCCAAAGATGCCCTCCGAGC...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CAA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: PQCCGARPEGTEEGWRARQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGAGAGTATCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: QLPNLFRGWCYGRVTGEYLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...ATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp GGTGCTATGGGCGTGTCACCGGAGAGTATGGGCGGGGCGGGCAGAGGGGCAGCACGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: GAMGVSPESMGGAGRGAARRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...TGCTGCCCCTCTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp CAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTCCACACTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: QSCSFVPGPPQLLRGPPHWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...GTGTGGAGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS GCA 90 bp TCCTACCTTGGATGGGGCTCAGGTACTAGGGGCTCAGATGGCCTCTaGAGCCAAGCGGGTTGGGTCAGACTTGGTGGCTATGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SYLGWGSGTRGSDGL*SQAGWVRLGGYGSN
Trigger: ATTGCTGCCATAGCCACCAAGTCTGACCCAACCCGCTTGGCTGCAGAGGCCATCTGAGCCCCTAGTACCTGAGCCCCATCCAAGGTAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465529.1
CDS GCA 90 bp CCCACACAGGGGCAGGAGTTGGAGGCTTTCCTCTCTAACGGCTTCTaGAGGGGCAGACTCCAGTTGGAGGTCATGGGCACAGACTTCAGA +
Preference number: 5 (lower is better)
Translates to: PTQGQELEAFLSNGF*RGRLQLEVMGTDFR
Trigger: TCTGAAGTCTGTGCCCATGACCTCCAACTGGAGTCTGCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp CTTGGTGGTCTGGCCTGTTCGGAACCGTTCAAACCCCAGCTGGTAGGCACAATGTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LGGLACSEPFKPQLVGTMSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...CATTGTGCCTACCAGCTGGGGTTTGAACGGTTCCGAACAGGCCAGACCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CAA 90 bp GTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: VWMGDSMSRSVMGNSRPFSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...GAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TSHPQSSLNTRGGREVPADCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QATPKAALTPEEGGRSQPDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TGCGCGCAGAGTTGCAGCTTCGTACCTGGGCCGCCGCAGCTCCTCAGGGGGCCTAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: CAQSCSFVPGPPQLLRGPNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...AGGCCCCCTGAGGAGCTGCGGCGGCCCAGGTACGAAGCTGCAACTCTGCGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACTGTGAGAGCCAGCATCACCAGCTGGGATGAGAGGTaGCCGGTGGCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: RCPQFLTQVSKTVRASITSWDER*PVAAGS
Trigger: TGACCCAGCAGCCACCGGCAACCTCTCATCCCAGCT...GGTGATGCTGGCTCTCACAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTACGGTCTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: QATPKAALTPEEGGRSQPTVWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGACCGT...AGGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425375.5
CDS-3UTR CAA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGCAAGGGCAAGGGGTTaGTCATCTGTTGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: VKESHTGSSSQPASQPVLARARG*SSVETE
Trigger: CTCAGTCTCAACAGATGACAAACCCCTTGCCCTTGC...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447733.5
CDS TCA 90 bp CTCTCTGGGCTGTTGTCTCCTTGTCCCGGTAAGACTCTTCCTGTTTaGTGTCAAGGTCTCCCCGCTCCAAGATGCACCCTGCTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSGLLSPCPGKTLPV*CQGLPAPRCTLLAA
Trigger: GGCTGCGAGCAGGGTGCATCTTGGAGCGGGGAGACCTTGACATCAAACAGGAAGAGTCTTACCGGGACAAGGAGACAACAGCCCAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608674.5
CDS GCA 90 bp CTGAGCTTCAATGTCACCCACAGGTCCTTTGGCCCAGGCTCTCCCTaGCAGTGGTTCTGGAGTGATGTAAGCGTCTGTTCCCATGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSFNVTHRSFGPGSP*QWFWSDVSVCSHAG
Trigger: CCCAGCATGGGAACAGACGCTTACATCACTCCAGAACCACTGGCAGGGAGAGCCTGGGCCAAAGGACCTGTGGGTGACATTGAAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 90 bp GGGGACATTTCACTTTCGGCCACAAAGACATGGGCTGTGCCACGATaGCTCCCACACAGGGGCAGGAGTTGGAGGCTTTCCTCTCTAACG +
Preference number: 5 (lower is better)
Translates to: GDISLSATKTWAVPR*LPHRGRSWRLSSLT
Trigger: CGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp GTCAGCCCAGGACTGGATGAGGTTGAGCACTTTGTCATGCACGATGGTGGGTGGACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: VSPGLDEVEHFVMHDGGWTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...CCACCCACCATCGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTGGGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp AGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACGATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RMVLTSTLSTKSWLATSTMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...CGTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp GGTGTGTGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTGCGAGCTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: GVWMGDSMSRSVMGNSRPASWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGCTCGC...AGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCACACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395736.7
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAGCCAAAGCCATGGGGCCCCATGCAGCAGAGCAGGGAAGGGACAAGAGGCTCGAATCTTCCTAGCCCATaGCTTAGCAGGGACTCACAA +
Preference number: 5 (lower is better)
Translates to: QPKPWGPMQQSREGTRGSNLPSP*LSRDSQ
Trigger: TTGTGAGTCCCTGCTAAGCAATGGGCTAGGAAGATT...CGAGCCTCTTGTCCCTTCCCTGCTCTGCTGCATGGGGCCCCATGGCTTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGRRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGGGGCCGTTCTTCCAGGAATTaGTCAAATTCTTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RRVTLGQAASQPASLSWGRSSRN*SNSSLV
Trigger: CACCAGCGAAGAATTTGACAAATTCCTGGAAGAACG...GCCCCAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GCAGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGATTGTGTCTCTGAGTaGAACACGGTCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: AEQPDPTAAQTCPPVHPTDCVSE*NTVWMR
Trigger: CCTCATCCAGACCGTGTTCAACTCAGAGACACAATC...AGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425375.5
CDS GCA 90 bp CAGCCACTGGTATTTATTTTACATTCATTTGCCAGAGCACCAAAGTaGCGAGCAGCACCCAACTCAGTCAGCCGGCCTCCCTGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: QPLVFILHSFARAPK*RAAPNSVSRPPCPR
Trigger: GCGGGGGCAGGGAGGCCGGCTGACTGAGTTGGGTGCTGCTCGGCACTTTGGTGCTCTGGCAAATGAATGTAAAATAAATACCAGTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 90 bp CTACAGATGGGGACATTTCACTTTCGGCCACAAAGACATGGGCTGTaGCACGATGGCTCCCACACAGGGGCAGGAGTTGGAGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQMGTFHFRPQRHGL*HDGSHTGAGVGGFP
Trigger: AGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCCATCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 90 bp ATCAGAATCTTCCTAGCCCATTGCTTAGCAGGGACTCACAACCTGTaGCCCCTGGACCTCCAGCAGCAGAGTCACCTTCCTCCGTCTCGT +
Preference number: 5 (lower is better)
Translates to: IRIFLAHCLAGTHNL*PLDLQQQSHLPPSR
Trigger: ACGAGACGGAGGAAGGTGACTCTGCTGCTGGAGGTCCAGGGGCCACAGGTTGTGAGTCCCTGCTAAGCAATGGGCTAGGAAGATTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS CCA 90 bp GGCCGAGAGGTGCCGTCGAGCACTGTGAGAGCCAGCATCACCTCGTaGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTGCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: GREVPSSTVRASITS*KFLFPTILFFTARR
Trigger: CCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATGCTGGCTCTCACAGTGCTCGACGGCACCTCTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439512.5
CDS-3UTR CAA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGCCAGGAGAAAGTCCATaGCTGCTACCGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMPGESP*LLPPLP
Trigger: TGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGG...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp GGAACCGTTCAAACCCCAGCTGGTAGGCACAATGAAGCTCAGCCAATCCAAGTCCCAGGAGAAAGTCCATaGCTGCTACCGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GTVQTPAGRHNEAQPIQVPGESP*LLPPLP
Trigger: TGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGG...GACTTGGATTGGCTGAGCTTCATTGTGCCTACCAGCTGGGGTTTGAACGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CAA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ATAGATGGTGACCACACCTGTCAGATCGGGCGAGCTGCGGAACGCGTCAGCCCAATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: IDGDHTCQIGRAAERVSPMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...TGGGCTGACGCGTTCCGCAGCTCGCCCGATCTGACAGGTGTGGTCACCATCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp GGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GCSWAGWSSPAHSPRSPGDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...GCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp CATGGGGAACTCCAGGCCTTTCCTCCGCAGGTCCTCATAGATGGTGACCACACCGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HGELQAFPPQVLIDGDHTDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...GGTGTGGTCACCATCTATGAGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp CTCACCTGCAGCCTGGGGCTGATGAGATCTCGCCCACTGCGCGCAGAGTTGCAGCGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: LTCSLGLMRSRPLRAELQRRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...CTGCAACTCTGCGCGCAGTGGGCGAGATCTCATCAGCCCCAGGCTGCAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCCAGCCTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: TSHPQSSLNTRGGREVPAWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...GGCTGGGACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCCCGGCTCGGCCTCACTaGGGGCCTTGGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTPARPH*GPWWSG
Trigger: GCCAGACCACCAAGGCCCCAAGTGAGGCCGAGCCGG...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTGTGGGTGGGTTGTTCTaGGGCAGGATGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSVGGLF*GRMVLT
Trigger: GGTGAGGACCATCCTGCCCAAGAACAACCCACCCAC...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TCCTGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: SCPDCVSELNTVLWGVWMTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...CATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCACGATGGTGGGTGGGTaGTTCTTGGGCAGGATGGTC +
Preference number: 5 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPTMVGG*FLGRMV
Trigger: GACCATCCTGCCCAAGAACAACCCACCCACCATCGT...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GWVVLGQDGPHQHTLHEVMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...GACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: AGYHSVKESHTGSSSQPAMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TGGATGGGTGACAGCATGTCCAGGTCAGTCATGGGGAACTCCAGGCCTTTCCTCGATTGTGTCTCTGAGTaGAACACGGTCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: WMGDSMSRSVMGNSRPFLDCVSE*NTVLWG
Trigger: ACCCCAGAGGACCGTGTTCAACTCAGAGACACAATC...GAGGAAAGGCCTGGAGTTCCCCATGACTGACCTGGACATGCTGTCACCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp TGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: WVVLGQDGPHQHTLHEVLQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...CAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
CDS-3UTR CAA 90 bp CCCCAGTGCTGTGGTGCCCGGCCAGAAGGAACAGAGGAAGGATGGAGGGCAAGGAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PQCCGARPEGTEEGWRARNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...CCTTGCCCTCCATCCTTCCTCTGTTCCTTCTGGCCGGGCACCACAGCACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCTGGCTGGCCACCAGCACCGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: QDGPHQHTLHEVLAGHQHRRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...GTGCTGGTGGCCAGCCAGGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp GTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCAGCCAGCCTGTCCTGCGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: VKESHTGSSSQPASQPVLRRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...CAGGACAGGCTGGCTGGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACGTTCTTCCAGGAATTaGTCAAATTCTTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GQEARQNFHCGQPPARPRRSSRN*SNSSLV
Trigger: CACCAGCGAAGAATTTGACAAATTCCTGGAAGAACG...TCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: GYKRHLSQYKRINQEVSPNRSAA*ARSSRN
Trigger: ATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATT...GGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCGAGGGGCTGGAGAGGTaGGGCAATCGGTCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTEGLER*GNRSAA
Trigger: AGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp AGAGCAGCCAGATCCCACTGCAGCGCAGACCTGTCCCCCAGTTCATCCCACTGCGGGGTTTGTCATCTGTaGAGACTGAGAGGCAATTTA +
Preference number: 5 (lower is better)
Translates to: RAARSHCSADLSPSSSHCGVCHL*RLRGNL
Trigger: TAAATTGCCTCTCAGTCTCAACAGATGACAAACCCC...GCAGTGGGATGAACTGGGGGACAGGTCTGCGCTGCAGTGGGATCTGGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447733.5
CDS GCA 90 bp TGTATCCAGCCAGGTTCTGATCACATCAGAATCTTCCTAGCCCATTaGTTAGCAGGGACTCACAACCTGTGGCCCCTGGACCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CIQPGSDHIRIFLAH*LAGTHNLWPLDLQQ
Trigger: CTGCTGGAGGTCCAGGGGCCACAGGTTGTGAGTCCCTGCTAAGCAATGGGCTAGGAAGATTCTGATGTGATCAGAACCTGGCTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS GCA 90 bp TGGGGAGAACCTTTCCAAATGGCCTCTTGCCATTCTGCATCCGCCTaGAGTGTAGACAGGACAGTGCGTTGCCTACAGACCTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: WGEPFQMASCHSASA*SVDRTVRCLQTFPA
Trigger: AGCTGGAAAGGTCTGTAGGCAACGCACTGTCCTGTCTACACTGCAGGCGGATGCAGAATGGCAAGAGGCCATTTGGAAAGGTTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 90 bp GAGGCCCACGTGTGTCTGGCCGCCCTGAGATCTGGGCTGGTTCAGTaGTGTGGGCAAGACTGTTCTCAGCCACTGGTATTTATTTTACAT +
Preference number: 5 (lower is better)
Translates to: EAHVCLAALRSGLVQ*CGQDCSQPLVFILH
Trigger: ATGTAAAATAAATACCAGTGGCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACACGTGGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 90 bp AGGCTAGCAGCAGTACTTACCGTCCAGGTGGCTGTGAGGATGAAATaGGATGTCAAAAGCTTAGCACAGGGCCTGGCATGGAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: RLAAVLTVQVAVRMK*DVKSLAQGLAWRRC
Trigger: GCATCTCCTCCATGCCAGGCCCTGTGCTAAGCTTTTGACATCCCATTTCATCCTCACAGCCACCTGGACGGTAAGTACTGCTGCTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS-3UTR CAA 90 bp ACTGCGCAGCTTCCCAATCTGTTCCGGGGTTGGTGCTATGGGCGTGTCACCGGACGTTCTTCCAGGAATTaGTCAAATTCTTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TAQLPNLFRGWCYGRVTGRSSRN*SNSSLV
Trigger: CACCAGCGAAGAATTTGACAAATTCCTGGAAGAACG...TCCGGTGACACGCCCATAGCACCAACCCCGGAACAGATTGGGAAGCTGCGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS GCA 90 bp CATCACCTCGTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACGATGCGCTGTCCCACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: HHLVEVLIPHDSLLY*SEGIFGTMRCPTGE
Trigger: CTCTCCAGTGGGACAGCGCATCGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR CAA 90 bp GGTGGGTTGTTCTTGGGCAGGATGGTCCTCACCAGCACACTCTCCACGAAGTCCATCTTTGGGACTGTTTaGTGTATCCAGCCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: GGLFLGRMVLTSTLSTKSIFGTV*CIQPGS
Trigger: AGAACCTGGCTGGATACACAAAACAGTCCCAAAGAT...GGACTTCGTGGAGAGTGTGCTGGTGAGGACCATCCTGCCCAAGAACAACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGCTGGCCAGAGTCCTCTaGCTGGCTGGAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKLARVL*LAGVSA
Trigger: GGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACAAGAGGCTCGGCAGAATTTCCACTGTGGCCAGCCTCCAGCCAGGCCTCGACTAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TRGSAEFPLWPASSQASTNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...AGTCGAGGCCTGGCTGGAGGCTGGCCACAGTGGAAATTCTGCCGAGCCTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GCAGGGTATCACTCAGTGAAGGAGAGTCACACTGGGTCAAGCAGCCAGCCAGCCCGCAGGAACACATTGTaGAGATTGTCATTGACGATG +
Preference number: 5 (lower is better)
Translates to: AGYHSVKESHTGSSSQPARRNTL*RLSLTM
Trigger: CATCGTCAATGACAATCTCAACAATGTGTTCCTGCG...GGCTGGCTGGCTGCTTGACCCAGTGTGACTCTCCTTCACTGAGTGATACCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGCCTCACTTGGGGCCTaGGTGGTCTGGCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQASLGA*VVWPVR
Trigger: CCGAACAGGCCAGACCACCAAGGCCCCAAGTGAGGC...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp GGGGTAACAAGCCACCCCCAAAGCAGCCTTAACACCAGAGGAGGGAGGGAGGTCCGTTCTTCCAGGAATTaGTCAAATTTACCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: GVTSHPQSSLNTRGGREVRSSRN*SNLPSL
Trigger: CAGCGAAGGTAAATTTGACAAATTCCTGGAAGAACG...GACCTCCCTCCCTCCTCTGGTGTTAAGGCTGCTTTGGGGGTGGCTTGTTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000447733.5
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGGCTCGGAGGGCATCTTaGGGACGATGCGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKARRAS*GRCAVP
Trigger: TGGGACAGCGCATCGTCCCAAAGATGCCCTCCGAGC...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGTCGCAGATCTCCATGTaGAGGGCCCAGTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKSQISM*RAQSSL
Trigger: GAGCGAGGACTGGGCCCTCAACATGGAGATCTGCGA...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp TGTCCTGATTGTGTCTCTGAGTTGAACACGGTCCTCTGGGGTGTGTGGATGGGTATGAGGTTGAGCACTTaGTCATGCACGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CPDCVSELNTVLWGVWMGMRLST*SCTMVG
Trigger: ACCCACCATCGTGCATGACAAAGTGCTCAACCTCAT...ACCCATCCACACACCCCAGAGGACCGTGTTCAACTCAGAGACACAATCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395736.7
ENST00000404284.6
ENST00000424387.5
ENST00000439512.5
ENST00000449508.1
CDS-3UTR CAA 90 bp TACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAGGTGAGCCCCAGTCAGGACTGGATGAGGTaGAGCACTTTGTCATGCACG +
Preference number: 5 (lower is better)
Translates to: YKRHLSQYKRINQEVSPSQDWMR*STLSCT
Trigger: CGTGCATGACAAAGTGCTCAACCTCATCCAGTCCTG...ACTGGGGCTCACCTCTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACTGTGAGAGCCAGCATCACCTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: RCPQFLTQVSKTVRASITWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...GGTGATGCTGGCTCTCACAGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS CCA 90 bp CCACGTGTGTCTGGCCGCCCTGAGATCTGGGCTGGTTCAGTGGTGTaGGCAAGACTGTTCTCAGCCACTGGTATTTATTTTACATTCATT +
Preference number: 5 (lower is better)
Translates to: PRVSGRPEIWAGSVV*ARLFSATGIYFTFI
Trigger: AATGAATGTAAAATAAATACCAGTGGCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKNRSAA*ARSSRN
Trigger: ATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATT...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS GCA 90 bp CATCACCTCGTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACCTTCCTCCGTCTCGTTGATGAT +
Preference number: 5 (lower is better)
Translates to: HHLVEVLIPHDSLLY*SEGIFGTFLRLVDD
Trigger: ATCATCAACGAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCACGAGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395736.7
ENST00000411850.5
ENST00000425375.5
ENST00000439512.5
ENST00000443206.2
ENST00000447733.5
ENST00000449058.7
ENST00000487670.1
ENST00000608674.5
ENST00000608749.5
CDS CCA 90 bp CTTAAGCCAATTCACCTGGATATAAATGCTGCTTGTGGAGGAGGGTaGGACAGCATTTATATCTTCCCCAGCCAAACCCATGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: LKPIHLDINAACGGG*DSIYIFPSQTHADG
Trigger: GCCGTCAGCATGGGTTTGGCTGGGGAAGATATAAATGCTGTCCCACCCTCCTCCACAAGCAGCATTTATATCCAGGTGAATTGGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS-3UTR CAA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAACAATCTGTTCCGGGGTaGGTGCTATGGGCGTGTCAC +
Preference number: 5 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQQSVPG*VLWACH
Trigger: GTGACACGCCCATAGCACCAACCCCGGAACAGATTG...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS CCA 90 bp GATCTGGGCTGGTTCAGTGGTGTGGGCAAGACTGTTCTCAGCCACTaGTATTTATTTTACATTCATTTGCCAGAGCACCAAAGTGCCGAG +
Preference number: 5 (lower is better)
Translates to: DLGWFSGVGKTVLSH*YLFYIHLPEHQSAE
Trigger: CTCGGCACTTTGGTGCTCTGGCAAATGAATGTAAAATAAATACCAGTGGCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS-3UTR CAA 90 bp CGCAAACATGTCAAACTCATCTTCCAGTCGACCAGAGGCCTCCAGAGACTGCAGAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RKHVKLIFQSTRGLQRLQNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...CTGCAGTCTCTGGAGGCCTCTGGTCGACTGGAAGATGAGTTTGACATGTTTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404284.6
ENST00000424387.5
CDS-3UTR CAA 90 bp CTACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCTGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: LPLIGDTKGTSPSTRGSTWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...GGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp ACCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAATGGCGCAGGAACACATaGTTGAGATTGTCATTGACG +
Preference number: 5 (lower is better)
Translates to: TFNWGYKRHLSQYKRINQWRRNT*LRLSLT
Trigger: CGTCAATGACAATCTCAACAATGTGTTCCTGCGCCA...TTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGCGTTCTTCCAGGAATTaGTCAAATTCTTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKRSSRN*SNSSLV
Trigger: CACCAGCGAAGAATTTGACAAATTCCTGGAAGAACG...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404284.6
ENST00000424387.5
ENST00000425375.5
ENST00000449058.7
CDS-3UTR CAA 90 bp CCTTTAATTGGGGATACAAAAGGCACCTCTCCCAGTACAAGAGGATCAACCAAGAACACATTGTTGAGATaGTCATTGACGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLIGDTKGTSPSTRGSTKNTLLR*SLTMSS
Trigger: GCTGCTCATCGTCAATGACAATCTCAACAATGTGTT...CTTGGTTGATCCTCTTGTACTGGGAGAGGTGCCTTTTGTATCCCCAATTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000424387.5
ENST00000425375.5
ENST00000447733.5
ENST00000449058.7
CDS TCA 72 bp GGAAGCTGGGCTGGCCGGGCCAACCCGGAAACAGCCTaGGCCCTGGGGTCCCGCAAGACCCTCAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GSWAGRANPETA*ALGSRKTLSCP
Trigger: GGGGCAGCTGAGGGTCTTGCGGGACCCCAGGGCTCAGGCTGTTTCCGGGTTGGCCCGGCCAGCCCAGCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp GGGCTGGCCGGGCCAACCCGGAAACAGCCTGAGCCCTaGGGTCCCGCAAGACCCTCAGCTGCCCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: GLAGPTRKQPEP*GPARPSAAPPC
Trigger: GCAAGGAGGGGCAGCTGAGGGTCTTGCGGGACCCCAGGGCTCAGGCTGTTTCCGGGTTGGCCCGGCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp CCCAGCCTCAGCTGCCTAGCTGCCCGGACCCACCACTaGGCCCGCTGTGCCAGGCTGTGGGTGATGGAGGTG +
Preference number: 6 (lower is better)
Translates to: PSLSCLAARTHH*ARCARLWVMEV
Trigger: CACCTCCATCACCCACAGCCTGGCACAGCGGGCCCAGTGGTGGGTCCGGGCAGCTAGGCAGCTGAGGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS TCA 72 bp CTGCTACCGCCGCTGCCACCAACCCCGGGAATCAGCTaGCAGCAACCGCCAGCGCCACCGACCCGTCACGTG +
Preference number: 6 (lower is better)
Translates to: LLPPLPPTPGIS*QQPPAPPTRHV
Trigger: CACGTGACGGGTCGGTGGCGCTGGCGGTTGCTGTCAGCTGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411850.5
ENST00000425375.5
ENST00000456128.5
CDS GCA 72 bp GGCTGCTGGGTCAGGGCCCATGTCGATCAGGTCAGCTaGCGGCTCGGCCTCACTTGGGGCCTGGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GCWVRAHVDQVS*RLGLTWGLVGR
Trigger: CCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCCTGACCCAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS GCA 72 bp CACTCCCTTGGAGAGCAGCACGGTGCCCCACGCCCATaGCTGGCAGGAGCCCTGCGAGCACCCCCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: HSLGEQHGAPRP*LAGALRAPPAF
Trigger: GAAAGCTGGGGGTGCTCGCAGGGCTCCTGCCAGGCATGGGCGTGGGGCACCGTGCTGCTCTCCAAGGGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp CCTGCGAGCACCCCCAGCTTTCCGGGTGGCCGGGCCTaGCCCCTGCTCACCATGCCTTGTCTCACCATCCAG +
Preference number: 6 (lower is better)
Translates to: PASTPSFPGGRA*PLLTMPCLTIQ
Trigger: CTGGATGGTGAGACAAGGCATGGTGAGCAGGGGCCAGGCCCGGCCACCCGGAAAGCTGGGGGTGCTCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp GGGCTCCCTGGAAGGGTGCAGGAGTGTGCTGCGTGGTaGGATGGCCGTCTCTGCCCCCAACCTCTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: GLPGRVQECAAW*DGRLCPQPLLG
Trigger: CCCAAGGAGAGGTTGGGGGCAGAGACGGCCATCCCACCACGCAGCACACTCCTGCACCCTTCCAGGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465529.1
CDS TCA 72 bp GCCGGCCTCCCTGCCCCCGCGGAGGCCTGGGTTTACTaGGCTTCAATGTCACCCACAGGTCCTTTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: AGLPAPAEAWVY*ASMSPTGPLAQ
Trigger: CTGGGCCAAAGGACCTGTGGGTGACATTGAAGCTCAGTAAACCCAGGCCTCCGCGGGGGCAGGGAGGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 72 bp AGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTGGTaGGAAGGGAGATGCCCTGATCATCCCCGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: RSAAGSASLGAW*EGRCPDHPRCL
Trigger: CAGACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS GCA 72 bp GGCTCGGCCTCACTTGGGGCCTGGTGGGAAGGGAGATaGCCTGATCATCCCCGCTGTCTGCAGCTTCGTTCC +
Preference number: 6 (lower is better)
Translates to: GSASLGAWWEGR*PDHPRCLQLRS
Trigger: GGAACGAAGCTGCAGACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS CCA 72 bp ATCAGGTCAGCTGCCGGCTCGGCCTCACTTGGGGCCTaGTGGGAAGGGAGATGCCCTGATCATCCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: IRSAAGSASLGA*WEGRCPDHPRC
Trigger: ACAGCGGGGATGATCAGGGCATCTCCCTTCCCACCAGGCCCCAAGTGAGGCCGAGCCGGCAGCTGACCTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS TCA 72 bp TCTGCAGGGAGCCATCTGTGGCTTTCTCAGCTCAGCTaGTCGCCCGCAGCCACCCCATCACCCTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SAGSHLWLSQLS*SPAATPSPSSG
Trigger: GCCTGAGGAGGGTGATGGGGTGGCTGCGGGCGATCAGCTGAGCTGAGAAAGCCACAGATGGCTCCCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443206.2
CDS TCA 72 bp CTGACGGCTAGGAGGCCCACGTGTGTCTGGCCGCCCTaGGATCTGGGCTGGTTCAGTGGTGTGGGCAAGACT +
Preference number: 6 (lower is better)
Translates to: LTARRPTCVWPP*DLGWFSGVGKT
Trigger: AGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACACGTGGGCCTCCTAGCCGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 72 bp CCGTCTCCCGCTCCGCTATCCCCATCGCCTCTTAGCTaGCAGACGGGCTACCTTGTCCTTGCCCGAGACTCA +
Preference number: 6 (lower is better)
Translates to: PSPAPLSPSPLS*QTGYLVLARDS
Trigger: TGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATGGGGATAGCGGAGCGGGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp GCACACAAGGCTGGGCTTCCAGATCCGTGTGGAATCTaGGCTGCCACTAAGAGAGGCGGGGTGGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: AHKAGLPDPCGI*AATKRGGVGWQ
Trigger: CTGCCACCCCACCCCGCCTCTCTTAGTGGCAGCCCAGATTCCACACGGATCTGGAAGCCCAGCCTTGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465529.1
CDS CAA 72 bp GGCTGTGCCACGATGGCTCCCACACAGGGGCAGGAGTaGGAGGCTTTCCTCTCTAACGGCTTCTGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GCATMAPTQGQE*EAFLSNGFCRG
Trigger: GCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 90 bp CGCTATCCCCATCGCCTCTTAGCTGCCAGACGGGCTACCTTGTCCTaGCCCGAGACTCAAGAGCAGGAACCGGGCACAGAGGAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RYPHRLLAARRATLS*PETQEQEPGTEELR
Trigger: CCGCAGCTCCTCTGTGCCCGGTTCCTGCTCTTGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATGGGGATAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 90 bp CCGCTCCGCTATCCCCATCGCCTCTTAGCTGCCAGACGGGCTACCTaGTCCTTGCCCGAGACTCAAGAGCAGGAACCGGGCACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: PLRYPHRLLAARRAT*SLPETQEQEPGTEE
Trigger: CTCCTCTGTGCCCGGTTCCTGCTCTTGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATGGGGATAGCGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS GCA 72 bp GTTCCCCAGGAGAAAGTCCATTGCTGCTACCGCCGCTaGCACCAACCCCGGGAATCAGCTGACAGCAACCGC +
Preference number: 6 (lower is better)
Translates to: VPQEKVHCCYRR*HQPRESADSNR
Trigger: GCGGTTGCTGTCAGCTGATTCCCGGGGTTGGTGGCAGCGGCGGTAGCAGCAATGGACTTTCTCCTGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000404284.6
ENST00000411850.5
ENST00000425375.5
ENST00000439512.5
ENST00000456128.5
ENST00000465529.1
ENST00000487670.1
CDS CCA 72 bp CGGTGCCCGCAGTTCTTGACACAGGTTTCTAAGACCTaGAGGGCCGAGAGGTGCCGTCGAGCACCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: RCPQFLTQVSKT*RAERCRRAPFL
Trigger: GAGGAAGGGTGCTCGACGGCACCTCTCGGCCCTCCAGGTCTTAGAAACCTGTGTCAAGAACTGCGGGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449508.1
CDS CCA 72 bp CTCCCTGGGAGGTTGGGGAGACCCTGGGGCATCAGGTaGTGGCACAGCCTTATTTACCTTGGTGGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LPGRLGRPWGIR*WHSLIYLGGLA
Trigger: GGCCAGACCACCAAGGTAAATAAGGCTGTGCCACCACCTGATGCCCCAGGGTCTCCCCAACCTCCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491987.1
CDS CCA 72 bp GCTGTGCCACGATGGCTCCCACACAGGGGCAGGAGTTaGAGGCTTTCCTCTCTAACGGCTTCTGCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: AVPRWLPHRGRS*RLSSLTASAGA
Trigger: TGCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp ACTAGGGGCTCAGATGGCCTCTGCAGCCAAGCGGGTTaGGTCAGACTTGGTGGCTATGGCAGCAATGGGGCT +
Preference number: 6 (lower is better)
Translates to: TRGSDGLCSQAG*VRLGGYGSNGA
Trigger: AGCCCCATTGCTGCCATAGCCACCAAGTCTGACCCAACCCGCTTGGCTGCAGAGGCCATCTGAGCCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465529.1
CDS CCA 72 bp CTAGGAGGCCCACGTGTGTCTGGCCGCCCTGAGATCTaGGCTGGTTCAGTGGTGTGGGCAAGACTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: LGGPRVSGRPEI*AGSVVWARLFS
Trigger: TGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACACGTGGGCCTCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CAA 72 bp CATCGCCTCTTAGCTGCCAGACGGGCTACCTTGTCCTaGCCCGAGACTCAAGAGCAGGAACCGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: HRLLAARRATLS*PETQEQEPGTE
Trigger: CTCTGTGCCCGGTTCCTGCTCTTGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 72 bp TATCCCCATCGCCTCTTAGCTGCCAGACGGGCTACCTaGTCCTTGCCCGAGACTCAAGAGCAGGAACCGGGC +
Preference number: 6 (lower is better)
Translates to: YPHRLLAARRAT*SLPETQEQEPG
Trigger: GCCCGGTTCCTGCTCTTGAGTCTCGGGCAAGGACAAGGTAGCCCGTCTGGCAGCTAAGAGGCGATGGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 90 bp AAAGACATGGGCTGTGCCACGATGGCTCCCACACAGGGGCAGGAGTaGGAGGCTTTCCTCTCTAACGGCTTCTGCAGGGGCAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: KDMGCATMAPTQGQE*EAFLSNGFCRGRLQ
Trigger: CTGGAGTCTGCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS TCA 72 bp CTTTGGCCCAGGCTCTCCCTGCCAGTGGTTCTGGAGTaGTGTAAGCGTCTGTTCCCATGCTGGGGGATTGGG +
Preference number: 6 (lower is better)
Translates to: LWPRLSLPVVLE*CKRLFPCWGIG
Trigger: CCCAATCCCCCAGCATGGGAACAGACGCTTACATCACTCCAGAACCACTGGCAGGGAGAGCCTGGGCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS TCA 72 bp GGACAGCATTTATATCTTCCCCAGCCAAACCCATGCTaGCGGCTAGGAGGCCCACGTGTGTCTGGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: GQHLYLPQPNPC*RLGGPRVSGRP
Trigger: AGGGCGGCCAGACACACGTGGGCCTCCTAGCCGTCAGCATGGGTTTGGCTGGGGAAGATATAAATGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 72 bp GGGCAGGAGTTGGAGGCTTTCCTCTCTAACGGCTTCTaGAGGGGCAGACTCCAGTTGGAGGTCATGGGCACA +
Preference number: 6 (lower is better)
Translates to: GQELEAFLSNGF*RGRLQLEVMGT
Trigger: TGTGCCCATGACCTCCAACTGGAGTCTGCCCCTGCAGAAGCCGTTAGAGAGGAAAGCCTCCAACTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp GCTTGCCTCATCCTAGGCAGATGCTGCACACAAGGCTaGGCTTCCAGATCCGTGTGGAATCTGGGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: ACLILGRCCTQG*ASRSVWNLGCH
Trigger: GTGGCAGCCCAGATTCCACACGGATCTGGAAGCCCAGCCTTGTGTGCAGCATCTGCCTAGGATGAGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465529.1
CDS CCA 72 bp GCCAGGTGGGTAGACCCAGAGGGGCGGTGCTACAGATaGGGACATTTCACTTTCGGCCACAAAGACATGGGC +
Preference number: 6 (lower is better)
Translates to: ARWVDPEGRCYR*GHFTFGHKDMG
Trigger: GCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCCATCTGTAGCACCGCCCCTCTGGGTCTACCCACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 90 bp CCCTCAGCTGAGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAATTTGTCAAATTTACCTTCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PSAEGLERLGNRSAA*ARSSRNLSNLPSLV
Trigger: CACCAGCGAAGGTAAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTCAGCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000447733.5
CDS GCA 72 bp GGGACATTTCACTTTCGGCCACAAAGACATGGGCTGTaGCACGATGGCTCCCACACAGGGGCAGGAGTTGGA +
Preference number: 6 (lower is better)
Translates to: GTFHFRPQRHGL*HDGSHTGAGVG
Trigger: TCCAACTCCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CCA 72 bp TTCCTAGCCCATTGCTTAGCAGGGACTCACAACCTGTaGCCCCTGGACCTCCAGCAGCAGAGTCACCTTCCT +
Preference number: 6 (lower is better)
Translates to: FLAHCLAGTHNL*PLDLQQQSHLP
Trigger: AGGAAGGTGACTCTGCTGCTGGAGGTCCAGGGGCCACAGGTTGTGAGTCCCTGCTAAGCAATGGGCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS CCA 72 bp ACAGATGGGGACATTTCACTTTCGGCCACAAAGACATaGGCTGTGCCACGATGGCTCCCACACAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: TDGDISLSATKT*AVPRWLPHRGR
Trigger: CCTGCCCCTGTGTGGGAGCCATCGTGGCACAGCCCATGTCTTTGTGGCCGAAAGTGAAATGTCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS TCA 72 bp ACAGTGCGTTGCCTACAGACCTTTCCAGCTCTCAAATaGGGAGCTCAGAGGAGGCTGGGAGTCCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: TVRCLQTFPALK*GAQRRLGVLLG
Trigger: ACCCAGCAGGACTCCCAGCCTCCTCTGAGCTCCTCATTTGAGAGCTGGAAAGGTCTGTAGGCAACGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 72 bp AATGTCACCCACAGGTCCTTTGGCCCAGGCTCTCCCTaGCAGTGGTTCTGGAGTGATGTAAGCGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: NVTHRSFGPGSP*QWFWSDVSVCS
Trigger: GGAACAGACGCTTACATCACTCCAGAACCACTGGCAGGGAGAGCCTGGGCCAAAGGACCTGTGGGTGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CCA 72 bp GTGTGTCTGGCCGCCCTGAGATCTGGGCTGGTTCAGTaGTGTGGGCAAGACTGTTCTCAGCCACTGGTATTT +
Preference number: 6 (lower is better)
Translates to: VCLAALRSGLVQ*CGQDCSQPLVF
Trigger: AAATACCAGTGGCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CAA 72 bp GAGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTaGGCCCGTTCTTCCAGGAATTTGTCAAATTTACCT +
Preference number: 6 (lower is better)
Translates to: EGLERLGNRSAA*ARSSRNLSNLP
Trigger: AGGTAAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000447733.5
CDS CAA 90 bp CAGTGGTTCTGGAGTGATGTAAGCGTCTGTTCCCATGCTGGGGGATaGGGGAGAACCTTTCCAAATGGCCTCTTGCCATTCTGCATCCGC +
Preference number: 6 (lower is better)
Translates to: QWFWSDVSVCSHAGG*GRTFPNGLLPFCIR
Trigger: GCGGATGCAGAATGGCAAGAGGCCATTTGGAAAGGTTCTCCCCAATCCCCCAGCATGGGAACAGACGCTTACATCACTCCAGAACCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 72 bp CCAGGTTCTGATCACATCAGAATCTTCCTAGCCCATTaGTTAGCAGGGACTCACAACCTGTGGCCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: PGSDHIRIFLAH*LAGTHNLWPLD
Trigger: GTCCAGGGGCCACAGGTTGTGAGTCCCTGCTAAGCAATGGGCTAGGAAGATTCTGATGTGATCAGAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS CCA 72 bp AGGGGCTGGAGAGGTTGGGCAATCGGTCCGCGGCTTTaGCCCGTTCTTCCAGGAATTTGTCAAATTTACCTT +
Preference number: 6 (lower is better)
Translates to: RGWRGWAIGPRL*PVLPGICQIYL
Trigger: AAGGTAAATTTGACAAATTCCTGGAAGAACGGGCCAAAGCCGCGGACCGATTGCCCAACCTCTCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411850.5
ENST00000447733.5
CDS CCA 72 bp GCAGTACTTACCGTCCAGGTGGCTGTGAGGATGAAATaGGATGTCAAAAGCTTAGCACAGGGCCTGGCATGG +
Preference number: 6 (lower is better)
Translates to: AVLTVQVAVRMK*DVKSLAQGLAW
Trigger: CCATGCCAGGCCCTGTGCTAAGCTTTTGACATCCCATTTCATCCTCACAGCCACCTGGACGGTAAGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS TCA 72 bp GACTCCAGTTGGAGGTCATGGGCACAGACTTCAGAGTaGGAAAGAGCTGGACCTAGCTCACCCCTTAACACA +
Preference number: 6 (lower is better)
Translates to: DSSWRSWAQTSE*ERAGPSSPLNT
Trigger: TGTGTTAAGGGGTGAGCTAGGTCCAGCTCTTTCTCACTCTGAAGTCTGTGCCCATGACCTCCAACTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS GCA 72 bp GTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACGATGCGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: VEVLIPHDSLLY*SEGIFGTMRCP
Trigger: GGGACAGCGCATCGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424387.5
CDS CCA 72 bp TCTGGCCGCCCTGAGATCTGGGCTGGTTCAGTGGTGTaGGCAAGACTGTTCTCAGCCACTGGTATTTATTTT +
Preference number: 6 (lower is better)
Translates to: SGRPEIWAGSVV*ARLFSATGIYF
Trigger: AAAATAAATACCAGTGGCTGAGAACAGTCTTGCCCACACCACTGAACCAGCCCAGATCTCAGGGCGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CAA 72 bp TGGAGTGATGTAAGCGTCTGTTCCCATGCTGGGGGATaGGGGAGAACCTTTCCAAATGGCCTCTTGCCATTC +
Preference number: 6 (lower is better)
Translates to: WSDVSVCSHAGG*GRTFPNGLLPF
Trigger: GAATGGCAAGAGGCCATTTGGAAAGGTTCTCCCCAATCCCCCAGCATGGGAACAGACGCTTACATCACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS GCA 72 bp GTGGAAGTTCTTATTCCCCACGATTCTCTTCTTTACTaGTCGGAGGGCATCTTTGGGACCTTCCTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: VEVLIPHDSLLY*SEGIFGTFLRL
Trigger: GAGACGGAGGAAGGTCCCAAAGATGCCCTCCGAGCAGTAAAGAAGAGAATCGTGGGGAATAAGAACTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395736.7
ENST00000411850.5
ENST00000425375.5
ENST00000439512.5
ENST00000443206.2
ENST00000447733.5
ENST00000449058.7
ENST00000456128.5
ENST00000487670.1
ENST00000608674.5
ENST00000608749.5
CDS CAA 90 bp GTGGGCAAGACTGTTCTCAGCCACTGGTATTTATTTTACATTCATTaGCCAGAGCACCAAAGTGCCGAGCAGCACCCAACTCAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: VGKTVLSHWYLFYIH*PEHQSAEQHPTQSA
Trigger: GGCTGACTGAGTTGGGTGCTGCTCGGCACTTTGGTGCTCTGGCAAATGAATGTAAAATAAATACCAGTGGCTGAGAACAGTCTTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1
CDS CAA 90 bp AGCCATCTGTGGCTTTCTCTTAAATCAGAGGCAAGGGCAAGGGGTTaGTCATCTGTTGAGACTGAGAGGCAATTTAATGAATTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: SHLWLSLKSEARARG*SSVETERQFNELQR
Trigger: GCGCTGCAATTCATTAAATTGCCTCTCAGTCTCAACAGATGACAAACCCCTTGCCCTTGCCTCTGATTTAAGAGAAAGCCACAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447733.5
ENST00000608749.5
CDS GCA 72 bp TGTCATCTGTTGAGACTGAGAGGCAATTTAATGAATTaGAGCGCAATTCCCTCTAGCGCCCAGGATGGCAAA +
Preference number: 6 (lower is better)
Translates to: CHLLRLRGNLMN*SAIPSSAQDGK
Trigger: TTTGCCATCCTGGGCGCTAGAGGGAATTGCGCTGCAATTCATTAAATTGCCTCTCAGTCTCAACAGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447733.5
ENST00000608749.5
CDS CAA 90 bp GGCTTTCTCTTAAATCAGAGGCAAGGGCAAGGGGTTTGTCATCTGTaGAGACTGAGAGGCAATTTAATGAATTGCAGCGCAATTCCCTCT +
Preference number: 6 (lower is better)
Translates to: GFLLNQRQGQGVCHL*RLRGNLMNCSAIPS
Trigger: AGAGGGAATTGCGCTGCAATTCATTAAATTGCCTCTCAGTCTCAACAGATGACAAACCCCTTGCCCTTGCCTCTGATTTAAGAGAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447733.5
ENST00000608749.5
CDS TCA 72 bp CATCTTTGGGACTGTTTTGTGTATCCAGCCAGGTTCTaGTCACATCAGAATCTTCCTAGCCCATTGCTTAGC +
Preference number: 6 (lower is better)
Translates to: HLWDCFVYPARF*SHQNLPSPLLS
Trigger: GCTAAGCAATGGGCTAGGAAGATTCTGATGTGATCAGAACCTGGCTGGATACACAAAACAGTCCCAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404284.6
CDS CCA 72 bp ATGGCACTAATAGCACTAGTTACTAGTGAGCTACTTTaGAAAAGACAGACAGAGTCTTTCCCCAACCAGGCC +
Preference number: 6 (lower is better)
Translates to: MALIALVTSELL*KRQTESFPNQA
Trigger: GGCCTGGTTGGGGAAAGACTCTGTCTGTCTTTTCCAAAGTAGCTCACTAGTAACTAGTGCTATTAGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492723.1
CDS CAA 72 bp ACTGTTCTCAGCCACTGGTATTTATTTTACATTCATTaGCCAGAGCACCAAAGTGCCGAGCAGCACCCAACT +
Preference number: 6 (lower is better)
Translates to: TVLSHWYLFYIH*PEHQSAEQHPT
Trigger: AGTTGGGTGCTGCTCGGCACTTTGGTGCTCTGGCAAATGAATGTAAAATAAATACCAGTGGCTGAGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487670.1