RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF1B (Homo sapiens)

Ensembl gene IDs: ENSG00000028137

Ensembl transcript IDs: ENST00000376259.7, ENST00000489921.1, ENST00000492361.1, ENST00000536782.2

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGGGCGGGGCAGGTCACAGAGAGTCAGGGACTTGCCCCAGCATaGCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGC +
Preference number: 1 (lower is better)
Translates to: SWAGQVTESQGLAPA*PERPCPASLPRGTR
Trigger: GCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTGTGACCTGCCCCGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 90 bp TGGCAGGTGCAGCTGGGCGGGGCAGGTCACAGAGAGTCAGGGACTTaGCCCAGCATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAG +
Preference number: 1 (lower is better)
Translates to: WQVQLGGAGHRESGT*PSMPRTSMPSQPSE
Trigger: CTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTGTGACCTGCCCCGCCCAGCTGCACCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 90 bp GTCACAGAGAGTCAGGGACTTGCCCCAGCATGCCCCGAACGTCCATaGCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: VTESQGLAPACPERP*PASLPRGTRHGSRG
Trigger: GCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 90 bp AAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGCTaGAGGCACACCGGAGTGAAGGCGGAGGGTGCAAATGGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: KEMVWPRTARKEARG*RHTGVKAEGANGRW
Trigger: CCACCTGCCATTTGCACCCTCCGCCTTCACTCCGGTGTGCCTGCAGCCCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp CCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATaGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: PRTSMPSQPSERDTP*QQRLSTTRCLCSWP
Trigger: AGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp GCAGGTCAGAGGGAGGCTGCGGCTGTGGAGGGCACTAGAGGAACTTaGCCCAGAAAGAGCCTCAGAGTCCTAGTGGTGGGGGCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: AGQREAAAVEGTRGT*PRKSLRVLVVGAWK
Trigger: CTTCCAGGCCCCCACCACTAGGACTCTGAGGCTCTTTCTGGGCCAAGTTCCTCTAGTGCCCTCCACAGCCGCAGCCTCCCTCTGACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp GGCTGCAGGCACACCGGAGTGAAGGCGGAGGGTGCAAATGGCAGGTaGGGGGTTGGATGTGGCTGGCAGAGTTTGGCTTTGTCGTTGGCT +
Preference number: 1 (lower is better)
Translates to: GCRHTGVKAEGANGR*GVGCGWQSLALSLA
Trigger: AGCCAACGACAAAGCCAAACTCTGCCAGCCACATCCAACCCCCCACCTGCCATTTGCACCCTCCGCCTTCACTCCGGTGTGCCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 90 bp CAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTaGGGTTCTCCCAGGACTGTCCACCAGGGGGCAGGTGCGCTCCAT +
Preference number: 1 (lower is better)
Translates to: QIHRFPALPCDAKEA*GSPRTVHQGAGALH
Trigger: ATGGAGCGCACCTGCCCCCTGGTGGACAGTCCTGGGAGAACCTCAGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp AGGACTGTCCACCAGGGGGCAGGTGCGCTCCATCATGTCCTCATGTaGGTCCAATGTGGGCAGAAACCTGGCCAGTCCCAGCAGTCTGAC +
Preference number: 1 (lower is better)
Translates to: RTVHQGAGALHHVLM*VQCGQKPGQSQQSD
Trigger: GTCAGACTGCTGGGACTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACCTGCCCCCTGGTGGACAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp CACGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTaGCCATGTACCAAAGTGGCAGGGCAGCCCGTTTGGGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: HATQTQTQDWHLGSH*PCTKVAGQPVWGPG
Trigger: TCCTGGGCCCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp AGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCAAAGTaGCAGGGCAGCCCGTTTGGGGCCCAGGAATTGAAGGTGGGGAGT +
Preference number: 1 (lower is better)
Translates to: RHKTGTWDHTGHVPK*QGSPFGAQELKVGS
Trigger: ACTCCCCACCTTCAATTCCTGGGCCCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp GGGAGGGGGAAGGCTGACTCTAATGGGGAGGAATCCCAGCTTCAGTaGCTTCAAGGCAGGCCATTCAACTTACCGACCTTGGCTACACAC +
Preference number: 1 (lower is better)
Translates to: GRGKADSNGEESQLQ*LQGRPFNLPTLATH
Trigger: GTGTGTAGCCAAGGTCGGTAAGTTGAATGGCCTGCCTTGAAGCCACTGAAGCTGGGATTCCTCCCCATTAGAGTCAGCCTTCCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp GTGCACGTCACTGCAGCCAGCCAGTCTGACATCTTGATTCCAGGGTaGAAAACCCTTCTTGTCTCCATGGTAATGGCTGGGCTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: VHVTAASQSDILIPG*KTLLVSMVMAGLSH
Trigger: GTGGGAGAGCCCAGCCATTACCATGGAGACAAGAAGGGTTTTCCACCCTGGAATCAAGATGTCAGACTGGCTGGCTGCAGTGACGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 90 bp GAGATGGCTACGAGGACTCAGTCATCTCTAGTTCCTGAAATTCCCTaGAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGG +
Preference number: 1 (lower is better)
Translates to: EMATRTQSSLVPEIP*KEMVWPRTARKEAR
Trigger: CCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTTCAGGAACTAGAGATGACTGAGTCCTCGTAGCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 90 bp CTCAGCCTCCTGAGTACAGGTGCACGTCACTGCAGCCAGCCAGTCTaGCATCTTGATTCCAGGGTGGAAAACCCTTCTTGTCTCCATGGT +
Preference number: 1 (lower is better)
Translates to: LSLLSTGARHCSQPV*HLDSRVENPSCLHG
Trigger: ACCATGGAGACAAGAAGGGTTTTCCACCCTGGAATCAAGATGTCAGACTGGCTGGCTGCAGTGACGTGCACCTGTACTCAGGAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 90 bp CTTGATTCCAGGGTGGAAAACCCTTCTTGTCTCCATGGTAATGGCTaGGCTCTCCCACCCTCCAATAGTTCAGCTGCCAAGCTCAAGTCC +
Preference number: 1 (lower is better)
Translates to: LDSRVENPSCLHGNG*ALPPSNSSAAKLKS
Trigger: GGACTTGAGCTTGGCAGCTGAACTATTGGAGGGTGGGAGAGCCCAGCCATTACCATGGAGACAAGAAGGGTTTTCCACCCTGGAATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 90 bp CTGCCAAGCTCAAGTCCAGTGGAATTTATCAACAATTTATCACCCTaGCCCTGCTCTGCTAGACAATTTCATGCCTTCTCCTTTATCCCC +
Preference number: 1 (lower is better)
Translates to: LPSSSPVEFINNLSP*PCSARQFHAFSFIP
Trigger: GGGGATAAAGGAGAAGGCATGAAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGGACTTGAGCTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGTTCGCAGGGTCATCCTaGCAGGGCTCAGCCCACCTT +
Preference number: 2 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWFAGSS*QGSAHL
Trigger: AAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAA...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACCCTCTGCTCTTGGCCTaGAGGTCAGAGGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNPLLLA*RSEGGC
Trigger: GCAGCCTCCCTCTGACCTGCAGGCCAAGAGCAGAGG...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGCCTCCTGAGCTAACTTaGAGGACCCCGTTCCCTACA +
Preference number: 2 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWPPELT*RTPFPT
Trigger: TGTAGGGAACGGGGTCCTTCAAGTTAGCTCAGGAGG...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGGAGGCGCGGGGCTaGAGGCACACCGGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRKEARG*RHTGVK
Trigger: CTTCACTCCGGTGTGCCTGCAGCCCCGCGCCTCCTT...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAAGGGAGGCTGCGGCTGTaGAGGGCACTAGAGGAACTT +
Preference number: 2 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQGRLRL*RALEEL
Trigger: AAGTTCCTCTAGTGCCCTCCACAGCCGCAGCCTCCC...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACCGCTGCCTCTGCTCTTaGCCTGCAGGTCAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDRCLCS*PAGQRE
Trigger: CTCCCTCTGACCTGCAGGCCAAGAGCAGAGGCAGCG...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp AACCTGCTTCCTCCCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCACCTGGCCTGAGGTaGTGCTTTCCAAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: NLLPPRIRARLHWFPLCRAPGLR*CFPSLL
Trigger: CAGGAGGCTTGGAAAGCATCACCTCAGGCCAGGTGC...CCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGGGAGGAAGCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGTGCCCCGAACGTCCATaGCCAGCCAGCCTTCCGAGA +
Preference number: 2 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGCPERP*PASLPR
Trigger: TCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCA...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGAGAGAGTCAGGGACTTaGCCCAGCATGCCCCGAACG +
Preference number: 2 (lower is better)
Translates to: PATSASRVQTISQPQASERESGT*PSMPRT
Trigger: CGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCT...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCGGGCAAGGCTACACTaGTTTCCCCTCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TREPRPHRVSKFIASRLCRARLH*FPLCRA
Trigger: GGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCG...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACACAACTCGCTGCCTCTaGTCTTGGCCTGCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDTTRCL*SWPAGQ
Trigger: CTGACCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGT...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGGGCCCTCTGGGCATCTaGCTTTCACACCATGGTACA +
Preference number: 2 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQGPLGI*LSHHGT
Trigger: TGTACCATGGTGTGAAAGTCAGATGCCCAGAGGGCC...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTCTGAATATGGTGGCCTaGCTGGGCCCTCTGGGCATC +
Preference number: 2 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPLNMVA*LGPLGI
Trigger: GATGCCCAGAGGGCCCAGGCAGGCCACCATATTCAG...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTCCTGCCTGGGCCCTCTaGGCATCTGACTTTCACACC +
Preference number: 2 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPPAWAL*ASDFHT
Trigger: GGTGTGAAAGTCAGATGCCCAGAGGGCCCAGGCAGG...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCGGGGTTGGATGTGGCTaGCAGAGTTTGGCTTTGTCG +
Preference number: 2 (lower is better)
Translates to: QGNQGPTESPNSSLPGSAGVGCG*QSLALS
Trigger: CGACAAAGCCAAACTCTGCCAGCCACATCCAACCCC...GGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGTCCTGTCTTCATGGGTaGCTCAGGCAGCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRSCLHG*LRQHPS
Trigger: GGAGGGATGCTGCCTGAGTCACCCATGAAGACAGGA...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGCTTTCCAAGCCTCCTaGGCTAACTTGAAGGACCCC +
Preference number: 2 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGAFQAS*ANLKDP
Trigger: GGGGTCCTTCAAGTTAGCTCAGGAGGCTTGGAAAGC...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACGAGAGGGACACGCCATaGCAGCAGAGGCTTTCCACA +
Preference number: 2 (lower is better)
Translates to: RNTDADTRLALGITLAMYERDTP*QQRLST
Trigger: TGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTC...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGCTTTCCACAACTCGCTaGCTCTGCTCTTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRLSTTR*LCSWPA
Trigger: TGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAG...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGTTCCCTGAAAGGAGATaGTGTGGCCTAGGACAGCAA +
Preference number: 2 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRFPERR*CGLGQQ
Trigger: TTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAA...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp TATCCCCATGCTCCTGAGACTGAGCCTTTCCAGGAGCCCCTCAACCTGCTTCCTGTTCCTGAAATTCCCTaGAAGGAGATGGTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: YPHAPETEPFQEPLNLLPVPEIP*KEMVWP
Trigger: AGGCCACACCATCTCCTTTCAGGGAATTTCAGGAAC...AGGAAGCAGGTTGAGGGGCTCCTGGAAAGGCTCAGTCTCAGGAGCATGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp TATCCCCATGCTCCTGAGACTGAGCCTTTCCAGGAGCCCCTCAACCTGCTTCCTGTGGCTGGCAGAGTTTaGCTTTGTCGTTGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: YPHAPETEPFQEPLNLLPVAGRV*LCRWLV
Trigger: AACAAGCCAACGACAAAGCCAAACTCTGCCAGCCAC...AGGAAGCAGGTTGAGGGGCTCCTGGAAAGGCTCAGTCTCAGGAGCATGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTAGAAGTGCGTTATCTTaGCCAGGCCACAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPRSALS*PGHSTE
Trigger: TTCAGTGCTGTGGCCTGGGCAAGATAACGCACTTCT...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGTGCAGAAAAGGATGCTaGGGTTTTCTGGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGCRKGC*GFLEAR
Trigger: TCTGGCTTCCAGAAAACCCCAGCATCCTTTTCTGCA...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR GCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTTTATCACCCTGCCCCTaGTCTGCTAGACAATTTCAT +
Preference number: 2 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPLSPCP*SARQFH
Trigger: ATGAAATTGTCTAGCAGAGCAGGGGCAGGGTGATAA...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATCTAGTGGTGGGGGCCTaGAAGGACCAGGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: NRFIDKQECRPAYSANFHLVVGA*KDQGPF
Trigger: GAAGGGGCCCTGGTCCTTCCAGGCCCCCACCACTAG...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCTGACTTTCACACCATaGTACAAAAGGACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: TREPRPHRVSKFIASRLCLTFTP*YKRTSW
Trigger: CCAACTTGTCCTTTTGTACCATGGTGTGAAAGTCAG...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTATATGGTGGCCTGCCTaGGCCCTCTGGGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: PVEFINNLSPCPCSARQFIWWPA*ALWASD
Trigger: GTCAGATGCCCAGAGGGCCCAGGCAGGCCACCATAT...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTGGCCATGTACCAAAGTaGCAGGGCAGCCCGTTTGGG +
Preference number: 2 (lower is better)
Translates to: PVEFINNLSPCPCSARQFGHVPK*QGSPFG
Trigger: CCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCC...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CAA 90 bp ATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCTaGGGATCAACACACACACACAAGGGAACCAAGGCCCCACAGAGT +
Preference number: 2 (lower is better)
Translates to: ISRNAVQHTVQTFIV*GSTHTHKGTKAPQS
Trigger: ACTCTGTGGGGCCTTGGTTCCCTTGTGTGTGTGTGTTGATCCCAAGACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR TCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATCCACTGCACCTGGCCTaGGGTGATGCTTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: NRFIDKQECRPAYSANFHPLHLA*GDAFQA
Trigger: GGCTTGGAAAGCATCACCTCAGGCCAGGTGCAGTGG...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCGGCACTAGAGGAACTTaGCCCAGAAAGAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVGTRGT*PRKSLR
Trigger: TCTGAGGCTCTTTCTGGGCCAAGTTCCTCTAGTGCC...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTCACAAGACTGGCACTTaGGATCACACTGGCCATGTA +
Preference number: 2 (lower is better)
Translates to: PVEFINNLSPCPCSARQFHKTGT*DHTGHV
Trigger: TACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTG...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTTTGTCGTTGGCTTGTTaGCCTGAGTGGTACTTACTT +
Preference number: 2 (lower is better)
Translates to: PVEFINNLSPCPCSARQFLSLAC*PEWYLL
Trigger: AAGTAAGTACCACTCAGGCCAACAAGCCAACGACAA...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGTAGGAGTAGAGAGATaGCTACGAGGACTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: NRFIDKQECRPAYSANFHVGVER*LRGLSH
Trigger: ATGACTGAGTCCTCGTAGCCATCTCTCTACTCCTAC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATCATCATGTCCTCATGTaGGTCCAATGTGGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: NRFIDKQECRPAYSANFHHHVLM*VQCGQK
Trigger: TTTCTGCCCACATTGGACCCACATGAGGACATGATG...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp GCCTGGAAGGACCAGGGCCCCTTCGCAGGGTCATCCTaGCAGGGCTCAGCCCACCTTGGCTACGACACAGCC +
Preference number: 3 (lower is better)
Translates to: AWKDQGPFAGSS*QGSAHLGYDTA
Trigger: GGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGTCCTTCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp CAGCTGGGCGGGGCAGGTCACAGAGAGTCAGGGACTTaGCCCAGCATGCCCCGAACGTCCATGCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: QLGGAGHRESGT*PSMPRTSMPSQ
Trigger: CTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTGTGACCTGCCCCGCCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp AGTCAGGGACTTGCCCCAGCATGCCCCGAACGTCCATaGCCAGCCAGCCTTCCGAGAGGGACACGCCATGGC +
Preference number: 3 (lower is better)
Translates to: SQGLAPACPERP*PASLPRGTRHG
Trigger: GCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp GGGCAGGTCACAGAGAGTCAGGGACTTGCCCCAGCATaGCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGA +
Preference number: 3 (lower is better)
Translates to: GQVTESQGLAPA*PERPCPASLPR
Trigger: TCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTGTGACCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp GTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGCTaGAGGCACACCGGAGTGAAGGCGGAGGGTGCAAAT +
Preference number: 3 (lower is better)
Translates to: VWPRTARKEARG*RHTGVKAEGAN
Trigger: ATTTGCACCCTCCGCCTTCACTCCGGTGTGCCTGCAGCCCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp CCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTaGTCTTGGCCTGCAGGTCAGAGGGAGGCTGCGGCT +
Preference number: 3 (lower is better)
Translates to: PWQQRLSTTRCL*SWPAGQREAAA
Trigger: AGCCGCAGCCTCCCTCTGACCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp TCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATaGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: SMPSQPSERDTP*QQRLSTTRCLC
Trigger: GCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp GACACGCCATGGCAGCAGAGGCTTTCCACAACTCGCTaGCTCTGCTCTTGGCCTGCAGGTCAGAGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: DTPWQQRLSTTR*LCSWPAGQREA
Trigger: AGCCTCCCTCTGACCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGCGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp CACCAGGGGGCAGGTGCGCTCCATCATGTCCTCATGTaGGTCCAATGTGGGCAGAAACCTGGCCAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: HQGAGALHHVLM*VQCGQKPGQSQ
Trigger: CTGGGACTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACCTGCCCCCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp CACACCGGAGTGAAGGCGGAGGGTGCAAATGGCAGGTaGGGGGTTGGATGTGGCTGGCAGAGTTTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: HTGVKAEGANGR*GVGCGWQSLAL
Trigger: CAAAGCCAAACTCTGCCAGCCACATCCAACCCCCCACCTGCCATTTGCACCCTCCGCCTTCACTCCGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CAA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGAGGGCTCAGCCCACCTaGGCTACGACACAGCCCACA +
Preference number: 3 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRRAQPT*ATTQPT
Trigger: TGTGGGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCT...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 72 bp CCTGAGGTGATGCTTTCCAAGCCTCCTGAGCTAACTTaGAGGACCCCGTTCCCTACAGGGCTGCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: PEVMLSKPPELT*RTPFPTGLPPP
Trigger: AGGAGGTGGCAGCCCTGTAGGGAACGGGGTCCTTCAAGTTAGCTCAGGAGGCTTGGAAAGCATCACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTaGCCTGTGATGCCAAGGAAGCCTGAGGTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PHRVSKFIASRL*PVMPRKPEVLP
Trigger: TGGGAGAACCTCAGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp ACTGGCACTTGGGATCACACTGGCCATGTACCAAAGTaGCAGGGCAGCCCGTTTGGGGCCCAGGAATTGAAG +
Preference number: 3 (lower is better)
Translates to: TGTWDHTGHVPK*QGSPFGAQELK
Trigger: CTTCAATTCCTGGGCCCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp CAGACGCAGACACAAGACTGGCACTTGGGATCACACTaGCCATGTACCAAAGTGGCAGGGCAGCCCGTTTGG +
Preference number: 3 (lower is better)
Translates to: QTQTQDWHLGSH*PCTKVAGQPVW
Trigger: CCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 72 bp GAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTaGTGCCAAGGAAGCCTGAGGTTCTCCCAGGACTGT +
Preference number: 3 (lower is better)
Translates to: ESPNSSLPGSAL*CQGSLRFSQDC
Trigger: ACAGTCCTGGGAGAACCTCAGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CAA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGAGTTTGGCTTTGTCGTaGGCTTGTTGGCCTGAGTGG +
Preference number: 3 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGSLALS*ACWPEW
Trigger: CCACTCAGGCCAACAAGCCAACGACAAAGCCAAACT...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CAA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCTGTGGCTGGCAGAGTTaGGCTTTGTCGTTGGCTTGT +
Preference number: 3 (lower is better)
Translates to: TREPRPHRVSKFIASRLCCGWQS*ALSLAC
Trigger: ACAAGCCAACGACAAAGCCAAACTCTGCCAGCCACA...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp AGTGGCTTCAAGGCAGGCCATTCAACTTACCGACCTTaGCTACACACACCCACGACACGCAACACAGACGCA +
Preference number: 3 (lower is better)
Translates to: SGFKAGHSTYRP*LHTPTTRNTDA
Trigger: TGCGTCTGTGTTGCGTGTCGTGGGTGTGTGTAGCCAAGGTCGGTAAGTTGAATGGCCTGCCTTGAAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CAA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACTGGCAGAGTTTGGCTTaGTCGTTGGCTTGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: RNTDADTRLALGITLAMYWQSLA*SLACWP
Trigger: AGGCCAACAAGCCAACGACAAAGCCAAACTCTGCCA...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR-3UTR CAA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTACACAAGACTGGCACTaGGGATCACACTGGCCATGT +
Preference number: 3 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPTQDWH*GSHWPC
Trigger: ACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGT...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 72 bp AGGTGCACGTCACTGCAGCCAGCCAGTCTGACATCTTaGTTCCAGGGTGGAAAACCCTTCTTGTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: RCTSLQPASLTS*FQGGKPFLSPW
Trigger: CCATGGAGACAAGAAGGGTTTTCCACCCTGGAATCAAGATGTCAGACTGGCTGGCTGCAGTGACGTGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp AGGGTGGAAAACCCTTCTTGTCTCCATGGTAATGGCTaGGCTCTCCCACCCTCCAATAGTTCAGCTGCCAAG +
Preference number: 3 (lower is better)
Translates to: RVENPSCLHGNG*ALPPSNSSAAK
Trigger: CTTGGCAGCTGAACTATTGGAGGGTGGGAGAGCCCAGCCATTACCATGGAGACAAGAAGGGTTTTCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp AAGGCTGACTCTAATGGGGAGGAATCCCAGCTTCAGTaGCTTCAAGGCAGGCCATTCAACTTACCGACCTTG +
Preference number: 3 (lower is better)
Translates to: KADSNGEESQLQ*LQGRPFNLPTL
Trigger: CAAGGTCGGTAAGTTGAATGGCCTGCCTTGAAGCCACTGAAGCTGGGATTCCTCCCCATTAGAGTCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CCA 72 bp ACTGCAGCCAGCCAGTCTGACATCTTGATTCCAGGGTaGAAAACCCTTCTTGTCTCCATGGTAATGGCTGGG +
Preference number: 3 (lower is better)
Translates to: TAASQSDILIPG*KTLLVSMVMAG
Trigger: CCCAGCCATTACCATGGAGACAAGAAGGGTTTTCCACCCTGGAATCAAGATGTCAGACTGGCTGGCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR TCA 72 bp ACGAGGACTCAGTCATCTCTAGTTCCTGAAATTCCCTaGAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAG +
Preference number: 3 (lower is better)
Translates to: TRTQSSLVPEIP*KEMVWPRTARK
Trigger: CTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTTCAGGAACTAGAGATGACTGAGTCCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp AAAATTGGCAGATTTCTAGTTAGAAGTGCGTTATCTTaGCCAGGCCACAGCACTGAATATGGTGGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: KIGRFLVRSALS*PGHSTEYGGLP
Trigger: AGGCAGGCCACCATATTCAGTGCTGTGGCCTGGGCAAGATAACGCACTTCTAACTAGAAATCTGCCAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp TCAAGTCCAGTGGAATTTATCAACAATTTATCACCCTaGCCCTGCTCTGCTAGACAATTTCATGCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SSPVEFINNLSP*PCSARQFHAFS
Trigger: GGAGAAGGCATGAAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR GCA 72 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTaGTCTGCTAGACAATTTCATGCCTTCTCCTTTATC +
Preference number: 3 (lower is better)
Translates to: PVEFINNLSPCP*SARQFHAFSFI
Trigger: GATAAAGGAGAAGGCATGAAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GGGGCCTGGAAGGACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCTTTCAGTTCCTGGTCTaGCCACGCCGAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GAWKDQGPFAGSSCQGSAFQFLV*PRRSPG
Trigger: GCCCGGGCTTCGGCGTGGCCAGACCAGGAACTGAAA...GGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGTCCTTCCAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGGGCCTCCACGCCTGGTaGCTGTGGCTGGTTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATGLHAW*LWLVPS
Trigger: ACTCGGAACCAGCCACAGGCACCAGGCGTGGAGGCC...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGACTGGCCTCCACGCCTaGTGCCTGTGGCTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATTGLHA*CLWLVP
Trigger: CGGAACCAGCCACAGGCACCAGGCGTGGAGGCCAGT...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGGGCCTGGAAGGACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCGGAGCAGGAAGGAGGTaGTTGGAGCAGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GAWKDQGPFAGSSCQGSAGAGRR*LEQCWV
Trigger: AACCCAGCACTGCTCCAAGCACCTCCTTCCTGCTCC...GGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGTCCTTCCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGAGCTCTCCAGGGAGCTaGTGCTGGAGCTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PNVHAQPAFREGHAMAAESSPGS*CWSSAL
Trigger: CAGCGCCGAGCTCCAGCAGCAGCTCCCTGGAGAGCT...CTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAAAATCTGAGCTCCCGGTaGTGGCCCGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQNLSSR*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCACCGGGAGCTCAGATT...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGCCCAGGCCACAGCACTaGATATGGTGGCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWPRPQH*IWWPAW
Trigger: CCAGGCAGGCCACCATATTCAGTGCTGTGGCCTGGG...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGTGGGCGGGCAAGGCGTaGGCCGCAGCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQWAGKA*AAAQSS
Trigger: GGAGCTCTGGGCTGCGGCGCACGCCTTGCCCGCCCA...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGGCTGTGATCAGCAGGTaGTGCTGCTCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWAVISR*CCSGPC
Trigger: ACAGGGCCCCGAGCAGCAGCACCTGCTGATCACAGC...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGGGCCTGGAAGGACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCTTTCCACAACTCGCTaGCTCTGCTCTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAWKDQGPFAGSSCQGSALSTTR*LCSWPA
Trigger: TGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAG...GGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGTCCTTCCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGCCTCCCCGGCCCCACTaGCCTCCACGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQPPRPH*PPRLVP
Trigger: AGGCACCAGGCGTGGAGGCCAGTGGGGCCGGGGAGG...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGAGCCGGCACCCCTCCTaGTTGCTCAGCGCGCAGTAC +
Preference number: 4 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRSRHPS*LLSAQY
Trigger: GTACTGCGCGCTGAGCAAGCAGGAGGGGTGCCGGCT...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGATTGGAGAAGGGGACCTaGTCGTCCTTCGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRLEKGT*SSFGDS
Trigger: GGAGTCCCCGAAGGACGAGCAGGTCCCCTTCTCCAA...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGTGGATGAAGTCGTGTTaGAGAACGTCCCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATWMKSC*RTSPGH
Trigger: GTGCCCCGGGGACGTTCTCCAACACGACTTCATCCA...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAACCTGGTGCCTGTGGCTaGTTCCGAGTGGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQPGACG*FRVGAL
Trigger: AAGGGCGCCCACTCGGAACCAGCCACAGGCACCAGG...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAACTAGTGGTGGGGGCCTaGAAGGACCAGGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQLVVGA*KDQGPF
Trigger: GAAGGGGCCCTGGTCCTTCCAGGCCCCCACCACTAG...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGGAGAGGGACACGCCATaGCAGCAGAGGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATERDTP*QQRLST
Trigger: TGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTC...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GGGGCCTGGAAGGACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCACTGTCCTGTCTTCATaGGTGACTCAGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GAWKDQGPFAGSSCQGSATVLSS*VTQAAS
Trigger: GGATGCTGCCTGAGTCACCCATGAAGACAGGACAGT...GGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGTCCTTCCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCATCCCGAGTGCAGGCTTaGGTTTCCACCTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HAPNVHAQPAFREGHAMASRVQA*VSTWSE
Trigger: CTCTGACCAGGTGGAAACTCAAGCCTGCACTCGGGA...TGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAATCGCTTCCCGGCTCTaGCCTGTGATGCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRIASRL*PVMPRK
Trigger: CTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGAT...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAATCCGGGTGGGGGACGTaGACGTGCAGACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQSGWGT*TCRLHP
Trigger: TGGATGCAGTCTGCACGTCCACGTCCCCCACCCGGA...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGCTGGGTTCTGGAGTTaGCTGCGTGTGTTGGGATCG +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRAGFWS*LRVLGS
Trigger: CGATCCCAACACACGCAGCCAACTCCAGAACCCAGC...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCACGCCTGGTGCCTGTaGCTGGTTCCGAGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QGNQGPTESPNSSLPGSAHAWCL*LVPSGR
Trigger: GCGCCCACTCGGAACCAGCCACAGGCACCAGGCGTG...GGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGCTCCATGGTAATGGCTaGGCTCTCCCACCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATLHGNG*ALPPSN
Trigger: ATTGGAGGGTGGGAGAGCCCAGCCATTACCATGGAG...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGGCCCTCTGGGCATCTaGCTTTCACACCATGGTACA +
Preference number: 4 (lower is better)
Translates to: PNVHAQPAFREGHAMAAEGPLGI*LSHHGT
Trigger: TGTACCATGGTGTGAAAGTCAGATGCCCAGAGGGCC...CTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACCTCCCCTCAGCCTCCTaGGTACAGGTGCACGTCACT +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNLPSAS*VQVHVT
Trigger: AGTGACGTGCACCTGTACTCAGGAGGCTGAGGGGAG...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGGGCACCCCTCCTGCTTaGTCAGCGCGCAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQGTPPA*SARSTS
Trigger: GCTGGTACTGCGCGCTGAGCAAGCAGGAGGGGTGCC...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACAGAGAGTCAGGGACTTaGCCCAGCATGCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNRESGT*PSMPRT
Trigger: CGTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCT...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGGGTGTAAATGCCACCTaGGCGGGCAAGGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: PATSASRVQTISQPQASEGVNAT*AGKACA
Trigger: GGCGCACGCCTTGCCCGCCCAGGTGGCATTTACACC...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAGTGCTCCCTTCAGCTaGGGGGCTGGGGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRSAPFS*GAGAHW
Trigger: CCAATGGGCCCCAGCCCCCCAGCTGAAGGGAGCACT...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGATTGACCTGGGTCCCATaGCCACCAGGGGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRLTWVP*PPGEES
Trigger: AGATTCTTCCCCTGGTGGCCATGGGACCCAGGTCAA...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAAGGCACATTCCTCCTTaGAGAAGGGGACCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HAPNVHAQPAFREGHAMARHIPP*RRGPAR
Trigger: ACGAGCAGGTCCCCTTCTCCAAGGAGGAATGTGCCT...TGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTTGGCTACGGGCACTAGAGGAACTTaGCCCAGAAAGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TRAPSQGHPARAQPTLATGTRGT*PRKSLR
Trigger: TCTGAGGCTCTTTCTGGGCCAAGTTCCTCTAGTGCC...CGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCGCTGGCAGGTGCAGCTaGGCGGGGCAGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCAGRCS*AGQVTE
Trigger: CTCTGTGACCTGCCCCGCCCAGCTGCACCTGCCAGC...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGGGGTTGGATGTGGCTaGCAGAGTTTGGCTTTGTCG +
Preference number: 4 (lower is better)
Translates to: PNVHAQPAFREGHAMAAEGVGCG*QSLALS
Trigger: CGACAAAGCCAAACTCTGCCAGCCACATCCAACCCC...CTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACGGCCATGTACCAAAGTaGCAGGGCAGCCCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNGHVPK*QGSPFG
Trigger: CCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCC...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGTTGGGAGGAGCACTGTaGGCTGTGGTCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRLGGAL*AVVRAA
Trigger: AGCAGCTCTGACCACAGCTCACAGTGCTCCTCCCAA...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTGGAGTGCAGTGGCGTaGTCTCGGCTCCCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDWSAVA*SRLPAT
Trigger: GGTTGCAGGGAGCCGAGATCACGCCACTGCACTCCA...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGGCCAGTCTGACATCTTaGTTCCAGGGTGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWASLTS*FQGGKP
Trigger: GGGTTTTCCACCCTGGAATCAAGATGTCAGACTGGC...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACGGCGTAGGGTGTAAATaGCACCTGGGCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDGVGCK*HLGGQG
Trigger: GCCTTGCCCGCCCAGGTGGCATTTACACCCTACGCC...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGGTACAGAAGACTTTTaGATGTTGGCCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HAPNVHAQPAFREGHAMAGTEDF*MLARRA
Trigger: TGCTCGCCGGGCCAACATGCAAAAGTCTTCTGTACC...TGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGCCTCTGCTCTTGGCCTaGAGGTCAGAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQPLLLA*RSEGGC
Trigger: GCAGCCTCCCTCTGACCTGCAGGCCAAGAGCAGAGG...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGCGTGTGGACACTGGCTaGGGTAAGTGTACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRRVDTG*GKCTAP
Trigger: AGGGGCAGTACACTTACCCCAGCCAGTGTCCACACG...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AACCTGCTTCCTCCCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGCGGGCAAGGCTACACTaGTTTCCCCTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLLPPRIRARLHWFPLCRRARLH*FPLCRA
Trigger: GGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCG...CCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGGGAGGAAGCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACCCTCCTGAGCTAACTTaGAGGACCCCGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNPPELT*RTPFPT
Trigger: TGTAGGGAACGGGGTCCTTCAAGTTAGCTCAGGAGG...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGGCACCTGGCCTGAGGTaGTGCTTTCCAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PATSASRVQTISQPQASEAPGLR*CFPSLL
Trigger: CAGGAGGCTTGGAAAGCATCACCTCAGGCCAGGTGC...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGGTTCCTGAAATTCCCTaGAAGGAGATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWVPEIP*KEMVWP
Trigger: AGGCCACACCATCTCCTTTCAGGGAATTTCAGGAAC...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTCCCGGCTCTGCCCTGTaGTGCCAAGGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPPGSAL*CQGSLR
Trigger: CCTCAGGCTTCCTTGGCATCACAGGGCAGAGCCGGG...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCGGGGCTTCTCTTCGGTaGTCCCCAGCAGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCGASLR*SPAGSL
Trigger: CAGAGACCCTGCTGGGGAGCACCGAAGAGAAGCCCC...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCTGCCCCGAACGTCCATaGCCAGCCAGCCTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCCPERP*PASLPR
Trigger: TCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCA...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGATTGCATTCCCAGGGATaGCCACCACGTTACAGATCT +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRLHSQG*PPRYRS
Trigger: AGATCTGTAACGTGGTGGCCATCCCTGGGAATGCAA...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACCAGGTGACATTGACCTaGGTCCCATGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDQVTLT*VPWPPG
Trigger: CCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTG...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCAGCCCACACCGGCCTaGTTAACTGGGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: QGNQGPTESPNSSLPGSAQPTPA*LTGLHP
Trigger: GGGATGAAGCCCAGTTAACCAGGCCGGTGTGGGCTG...GGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGCGCTGCCTCTGCTCTTaGCCTGCAGGTCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGRCLCS*PAGQRE
Trigger: CTCCCTCTGACCTGCAGGCCAAGAGCAGAGGCAGCG...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGCAAATATCCGTGGATaGAGTCGTGTTGGAGAACGT +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRANIRG*SRVGER
Trigger: ACGTTCTCCAACACGACTTCATCCACGGATATTTGC...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTCCTGTCTTCATGGGTaGCTCAGGCAGCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDSCLHG*LRQHPS
Trigger: GGAGGGATGCTGCCTGAGTCACCCATGAAGACAGGA...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACGCAGGCACACCGGAGTaGAGGCGGAGGGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYAGTPE*RRRVQM
Trigger: CATTTGCACCCTCCGCCTTCACTCCGGTGTGCCTGC...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGCCTGCAGGTGCAGATaGGGTTCTGTTCCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGACRCR*GSVPEC
Trigger: GCACTCGGGAACAGAACCGCATCTGCACCTGCAGGC...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGAGTACCAGCCGGGCCTaGAGGTGCAGATGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGSTSRA*RCRCGS
Trigger: AGAACCGCATCTGCACCTGCAGGCCCGGCTGGTACT...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGTGGGGGACGTGGACGTaGAGACTGCATCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRWGTWT*RLHPCL
Trigger: CAAGCATGGATGCAGTCTGCACGTCCACGTCCCCCA...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCTGAATATGGTGGCCTaGCTGGGCCCTCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCLNMVA*LGPLGI
Trigger: GATGCCCAGAGGGCCCAGGCAGGCCACCATATTCAG...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp TATCCCCATGCTCCTGAGACTGAGCCTTTCCAGGAGCCCCTCAACCTGCTTCCTAGGAGCCCCTCAACCTaGTTCCTCCCAGAATCCGGG +
Preference number: 4 (lower is better)
Translates to: YPHAPETEPFQEPLNLLPRSPST*FLPESG
Trigger: CCCGGATTCTGGGAGGAAGCAGGTTGAGGGGCTCCT...AGGAAGCAGGTTGAGGGGCTCCTGGAAAGGCTCAGTCTCAGGAGCATGGGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGCCTGCAAATATCCGTaGATGAAGTCGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PERPCPASLPRGTRHGSRACKYP*MKSCWR
Trigger: TCTCCAACACGACTTCATCCACGGATATTTGCAGGC...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGTTCTGTCCAACGCACTaGCCGAGCTCTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGFCPTH*PSSPGS
Trigger: GCTCCCTGGAGAGCTCGGCCAGTGCGTTGGACAGAA...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGGTGGCTGGTTCCGAGTaGGCGCCCTTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRVAGSE*APFCPT
Trigger: CGTTGGACAGAAGGGCGCCCACTCGGAACCAGCCAC...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGCTCCCATTGTGGAGCTaGCTTGGGAGGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRLPLWS*LGRSTV
Trigger: CACAGTGCTCCTCCCAAGCCAGCTCCACAATGGGAG...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGATATGGTGGCCTGCCTaGGCCCTCTGGGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGIWWPA*ALWASD
Trigger: GTCAGATGCCCAGAGGGCCCAGGCAGGCCACCATAT...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGCGTCTCCAGCTGTaGCCGAAAGGCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: QPPLPGFKRFPSLRLLSSWRLQL*PKGTFL
Trigger: GAGGAATGTGCCTTTCGGTCACAGCTGGAGACGCCA...GCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp AACCTGCTTCCTCCCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGCCAGCCTCAGGCTTCTaGGTAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: NLLPPRIRARLHWFPLCRPASGF*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGG...CCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGGGAGGAAGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTGCAGCCAGCCAGTCTaGCATCTTGATTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PATSASRVQTISQPQASECSQPV*HLDSRV
Trigger: CACCCTGGAATCAAGATGTCAGACTGGCTGGCTGCA...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACTTCGCAGGGTCATCCTaGCAGGGCTCAGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYFAGSS*QGSAHL
Trigger: AAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAA...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGACAACTCGCTGCCTCTaGTCTTGGCCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGTTRCL*SWPAGQ
Trigger: CTGACCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGT...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGTTATCACCCTGCCCCTaGTCTGCTAGACAATTTCAT +
Preference number: 4 (lower is better)
Translates to: PNVHAQPAFREGHAMAAELSPCP*SARQFH
Trigger: ATGAAATTGTCTAGCAGAGCAGGGGCAGGGTGATAA...CTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACACCACGTTACAGATCTaGTGGGGCCTGCAAATATCC +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNTTLQI*WGLQIS
Trigger: GGATATTTGCAGGCCCCACCAGATCTGTAACGTGGT...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TATCCCCATGCTCCTGAGACTGAGCCTTTCCAGGAGCCCCTCAACCTGCTTCCTTGCTTGGAGCAGTGCTaGGTTCTGGAGTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: YPHAPETEPFQEPLNLLPCLEQC*VLELAA
Trigger: CGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCA...AGGAAGCAGGTTGAGGGGCTCCTGGAAAGGCTCAGTCTCAGGAGCATGGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCTGTGTCTCCCATTGTaGAGCTGGCTTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCLCLPL*SWLGRS
Trigger: GCTCCTCCCAAGCCAGCTCCACAATGGGAGACACAG...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TATCCCCATGCTCCTGAGACTGAGCCTTTCCAGGAGCCCCTCAACCTGCTTCCTGGGACTCCGAGGGGCTaGAATCTGTGTCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YPHAPETEPFQEPLNLLPGTPRG*NLCLPL
Trigger: CAATGGGAGACACAGATTCCAGCCCCTCGGAGTCCC...AGGAAGCAGGTTGAGGGGCTCCTGGAAAGGCTCAGTCTCAGGAGCATGGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAAGTTTGGCTTTGTCGTTaGCTTGTTGGCCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQVWLCR*LVGLSG
Trigger: ACCACTCAGGCCAACAAGCCAACGACAAAGCCAAAC...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAAGTGGCTGGCAGAGTTTaGCTTTGTCGTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQVAGRV*LCRWLV
Trigger: AACAAGCCAACGACAAAGCCAAACTCTGCCAGCCAC...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTGCAGGGCAGCCCGTTTaGGGCCCAGGAATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPAGQPV*GPGIEG
Trigger: ACCTTCAATTCCTGGGCCCCAAACGGGCTGCCCTGC...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAACACAAGACTGGCACTTaGGATCACACTGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQHKTGT*DHTGHV
Trigger: TACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTG...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACGGTCATAGTATTCTCTaGGCCGGCATGTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYGHSIL*AGMCSR
Trigger: CCGGGAGCACATGCCGGCTCAGAGAATACTATGACC...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCCGTGGACGTGCAGACTaGATCCATGCTTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: QPPLPGFKRFPSLRLLSSRGRAD*IHACIP
Trigger: GGGAATGCAAGCATGGATGCAGTCTGCACGTCCACG...GCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGGTTCTGGAGTTGGCTaGGTGTGTTGGGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGGSGVG*VCWDRV
Trigger: CACACGATCCCAACACACGCAGCCAACTCCAGAACC...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAGCTGTGGTCAGAGCTaGTACAGACGTTCACGATGC +
Preference number: 4 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRSCGQS*YRRSRC
Trigger: GCATCGTGAACGTCTGTAGCAGCTCTGACCACAGCT...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCACTGACTTTCACACCATaGTACAAAAGGACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HAPNVHAQPAFREGHAMALTFTP*YKRTSW
Trigger: CCAACTTGTCCTTTTGTACCATGGTGTGAAAGTCAG...TGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CAA 72 bp CAGTGGCTTCAAGGCAGGCCATTCAACTTACCGACCTaGGCTACACACACCCACGACACGCAACACAGACGC +
Preference number: 4 (lower is better)
Translates to: QWLQGRPFNLPT*ATHTHDTQHRR
Trigger: GCGTCTGTGTTGCGTGTCGTGGGTGTGTGTAGCCAAGGTCGGTAAGTTGAATGGCCTGCCTTGAAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTGCTTTCCAAGCCTCCTaGGCTAACTTGAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPAFQAS*ANLKDP
Trigger: GGGGTCCTTCAAGTTAGCTCAGGAGGCTTGGAAAGC...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AAATTCCCTGAAAGGAGATGGTGTGGCCTAGGACAGCAAGGAAGGAGGCGCGGGGGTTCTGTTCCCGAGTaGAGGCTTGAGTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: KFPERRWCGLGQQGRRRGGSVPE*RLEFPP
Trigger: AGGTGGAAACTCAAGCCTGCACTCGGGAACAGAACC...CCCGCGCCTCCTTCCTTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGAGAAGTGCGTTATCTTaGCCAGGCCACAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQRSALS*PGHSTE
Trigger: TTCAGTGCTGTGGCCTGGGCAAGATAACGCACTTCT...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGACGTTACAGATCTGGTaGGGCCTGCAAATATCCGTG +
Preference number: 4 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRTLQIW*GLQISV
Trigger: CACGGATATTTGCAGGCCCCACCAGATCTGTAACGT...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACAGCAGTGCTGGGTTCTaGAGTTGGCTGCGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYSSAGF*SWLRVL
Trigger: CAACACACGCAGCCAACTCCAGAACCCAGCACTGCT...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACATCTTGATTCCAGGGTaGAAAACCCTTCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNILIPG*KTLLVS
Trigger: GGAGACAAGAAGGGTTTTCCACCCTGGAATCAAGAT...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACGTCATCTCTAGTTCCTaGAATTCCCTGAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNVISSS*NSLKGD
Trigger: ATCTCCTTTCAGGGAATTTCAGGAACTAGAGATGAC...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACAGAGCTGGGTGTATGTaGTGTCCTCACAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYRAGCM*CPHRSH
Trigger: GTGACTCCTGTGAGGACAGCACATACACCCAGCTCT...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCACCTTGGCTTCTCTCTaGAGGCACAAGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QPPLPGFKRFPSLRLLSSTLASL*RHKGFF
Trigger: AAAGAAGCCCTTGTGCCTGCAGAGAGAAGCCAAGGT...GCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACTGTGTTGGGATCGTGTaGACACTGGCTGGGGTAAGT +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYCVGIV*TLAGVS
Trigger: ACTTACCCCAGCCAGTGTCCACACGATCCCAACACA...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTGCAGAAAAGGATGCTaGGGTTTTCTGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDCRKGC*GFLEAR
Trigger: TCTGGCTTCCAGAAAACCCCAGCATCCTTTTCTGCA...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTACGCAGACACAAGACTaGCACTTGGGATCACACTGG +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPTQTQD*HLGSHW
Trigger: CCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGT...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGCATCATGTCCTCATGTaGGTCCAATGTGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PATSASRVQTISQPQASEHHVLM*VQCGQK
Trigger: TTTCTGCCCACATTGGACCCACATGAGGACATGATG...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGAGATCTGGTGGGGCCTaGAAATATCCGTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRRSGGA*KYPWMK
Trigger: CTTCATCCACGGATATTTGCAGGCCCCACCAGATCT...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACATTGATAAGCAGGAATaGCGTCCAGCATACAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDIDKQE*RPAYSA
Trigger: TGCACTGTATGCTGGACGGCATTCCTGCTTATCAAT...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp ACAAGGGAACCAAGGCCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCGGTGTCCGAGGTCTTaGTACAGAAGACTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TREPRPHRVSKFIASRLCRCPRS*YRRLLH
Trigger: ATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCG...GCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGGCCTTGGTTCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCACAATCAGTCCAACTaGAAGAGCGAAGTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYHNQSN*KSEVAS
Trigger: ACTGGCGACTTCGCTCTTCCAGTTGGACTGATTGTG...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AACCTGCTTCCTCCCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGTACAAAAGGACAAGTTaGCATTTGGAGGCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: NLLPPRIRARLHWFPLCRYKRTS*HLEAVL
Trigger: AAGCACCGCCTCCAAATGCCAACTTGTCCTTTTGTA...CCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGGGAGGAAGCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGTTCCCTGAAAGGAGATaGTGTGGCCTAGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRFPERR*CGLGQQ
Trigger: TTGCTGTCCTAGGCCACACCATCTCCTTTCAGGGAA...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCACTTGGGATCACACTaGCCATGTACCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RNTDADTRLALGITLAMYHLGSH*PCTKVA
Trigger: TGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTG...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTACCAGGGGAAGAATCTaGGCTCCCGGTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFTRGRI*APGAGP
Trigger: CGGGCCAGCACCGGGAGCTCAGATTCTTCCCCTGGT...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTAAGGAGGCGCGGGGCTaGAGGCACACCGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFKEARG*RHTGVK
Trigger: CTTCACTCCGGTGTGCCTGCAGCCCCGCGCCTCCTT...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTGTAGGAGTAGAGAGATaGCTACGAGGACTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPVGVER*LRGLSH
Trigger: ATGACTGAGTCCTCGTAGCCATCTCTCTACTCCTAC...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCACTCCTGGGCTCCAGTaGTCCTCCCCTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVTPGLQ*SSPQPP
Trigger: AGGAGGCTGAGGGGAGGATCACTGGAGCCCAGGAGT...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCAGCCGGGCCTGCAGGTaGAGATGCGGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVSRACR*RCGSVP
Trigger: GGGAACAGAACCGCATCTGCACCTGCAGGCCCGGCT...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGGGCCATACTCCGGGTaGGGGACGTGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHGPYSG*GTWTCR
Trigger: TCTGCACGTCCACGTCCCCCACCCGGAGTATGGCCC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTTTGTCGTTGGCTTGTTaGCCTGAGTGGTACTTACTT +
Preference number: 4 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPLSLAC*PEWYLL
Trigger: AAGTAAGTACCACTCAGGCCAACAAGCCAACGACAA...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTCCACTGCACCTGGCCTaGGGTGATGCTTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFPLHLA*GDAFQA
Trigger: GGCTTGGAAAGCATCACCTCAGGCCAGGTGCAGTGG...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGGACTTGCCCCAGCATaGCCCGAACGTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHGLAPA*PERPCP
Trigger: TGGGCATGGACGTTCGGGGCATGCTGGGGCAAGTCC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCCCTGCCTGGGCCCTCTaGGCATCTGACTTTCACACC +
Preference number: 4 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVPAWAL*ASDFHT
Trigger: GGTGTGAAAGTCAGATGCCCAGAGGGCCCAGGCAGG...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGGCCCGGCGAGCATTTaGTGCAGCACATCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHGPASI*CSTSEL
Trigger: CAGCTCAGATGTGCTGCAGCAAATGCTCGCCGGGCC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGTGATCAGCAGGTGCTaGTGCTCGGGGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHVISRC*CSGPCV
Trigger: TACACAGGGCCCCGAGCAGCAGCACCTGCTGATCAC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CAA 72 bp AATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCTaGGGATCAACACACACACACAAGGGAACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NAVQHTVQTFIV*GSTHTHKGTKA
Trigger: GGCCTTGGTTCCCTTGTGTGTGTGTGTTGATCCCAAGACAATGAAAGTTTGCACTGTATGCTGGACGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
3UTR CAA 72 bp GCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATaGTCTTGGGATCAACACACACACACAAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: AGMPSSIQCKLS*SWDQHTHTREP
Trigger: TGGTTCCCTTGTGTGTGTGTGTTGATCCCAAGACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTGTCTCAGCCTCAGGCTaGAGCACTGTCCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFVSASG*STVLSS
Trigger: TGAAGACAGGACAGTGCTTCAGCCTGAGGCTGAGAC...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATCCGGGGCACAGGGCTTaGACACCACGTCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHPGHRA*TPRLMF
Trigger: AAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGG...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATGTTGGCTGCGTGTGTTaGGATCGTGTGGACACTGGC +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHVGCVC*DRVDTG
Trigger: GCCAGTGTCCACACGATCCCAACACACGCAGCCAAC...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTGAGCACTGTGAGCTGTaGTCAGAGCTGCTACAGACG +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFEHCEL*SELLQT
Trigger: CGTCTGTAGCAGCTCTGACCACAGCTCACAGTGCTC...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTACCCAGTTCCAGAGCTaGGTGTATGTGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFTQFQS*VYVLSS
Trigger: TGAGGACAGCACATACACCCAGCTCTGGAACTGGGT...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR TCA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCCTTGCACACCACGTCTaGTGTTTCAGTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVLAHHV*CFSSWS
Trigger: AGACCAGGAACTGAAACATCAGACGTGGTGTGCAAG...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGCAGACTGCATCCATaGTTGCATTCCCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: NRFIDKQECRPAYSANFHCRLHP*LHSQGW
Trigger: CCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCA...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR GCA 90 bp CCAGTGGAATTTATCAACAATTTATCACCCTGCCCCTGCTCTGCTAGACAATTTAACAATTTATCACCCTaGCCCTGCTCTGCTAGACAA +
Preference number: 4 (lower is better)
Translates to: PVEFINNLSPCPCSARQFNNLSP*PCSARQ
Trigger: TTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTT...AAATTGTCTAGCAGAGCAGGGGCAGGGTGATAAATTGTTGATAAATTCCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS GCA 90 bp CCTAGGAGAGGTCTGGTCTGGCCACGCCGAAGCCCGGGCGGCACTTaGGCAGCGGCGCGCACAGCCGGCACCCCTCCTGCTTGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PRRGLVWPRRSPGGT*AAARTAGTPPACSA
Trigger: CGCTGAGCAAGCAGGAGGGGTGCCGGCTGTGCGCGCCGCTGCGCAAGTGCCGCCCGGGCTTCGGCGTGGCCAGACCAGACCTCTCCTAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CCA 90 bp CGGGCCTCCCCGGCCCCACTGGCCTCCACGCCTGGTGCCTGTGGCTaGTTCCGAGTGGGCGCCCTTCTGTCCAACGCACTGGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RASPAPLASTPGACG*FRVGALLSNALAEL
Trigger: GAGCTCGGCCAGTGCGTTGGACAGAAGGGCGCCCACTCGGAACCAGCCACAGGCACCAGGCGTGGAGGCCAGTGGGGCCGGGGAGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 90 bp CGGCCCCACTGGCCTCCACGCCTGGTGCCTGTGGCTGGTTCCGAGTaGGCGCCCTTCTGTCCAACGCACTGGCCGAGCTCTCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPHWPPRLVPVAGSE*APFCPTHWPSSPGS
Trigger: GCTCCCTGGAGAGCTCGGCCAGTGCGTTGGACAGAAGGGCGCCCACTCGGAACCAGCCACAGGCACCAGGCGTGGAGGCCAGTGGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 90 bp ATGTTTCAGTTCCTGGTCTGGCCACGCCGAAGCCCGGGCGGCACTTaGGCAGCGGCGCGCACAGCCGGCACCCCTCCTGCTTGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: MFQFLVWPRRSPGGT*AAARTAGTPPACSA
Trigger: CGCTGAGCAAGCAGGAGGGGTGCCGGCTGTGCGCGCCGCTGCGCAAGTGCCGCCCGGGCTTCGGCGTGGCCAGACCAGGAACTGAAACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 90 bp TCCAGGGAGCTGCTGCTGGAGCTCGGCGCTGTGATCAGCAGGTGCTaGTGCTCGGGGCCCTGTGTACCCCGGGCCTTATCGGCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SRELLLELGAVISRC*CSGPCVPRALSAGK
Trigger: CTTGCCTGCCGATAAGGCCCGGGGTACACAGGGCCCCGAGCAGCAGCACCTGCTGATCACAGCGCCGAGCTCCAGCAGCAGCTCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS-3UTR CAA 90 bp CCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACAAGCCCGGGCGGCACTaGCGCAGCGGCGCGCACAGC +
Preference number: 5 (lower is better)
Translates to: PLPGFKRFPSLRLLSSWDKPGRH*RSGAHS
Trigger: GCTGTGCGCGCCGCTGCGCAAGTGCCGCCCGGGCTT...GTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS GCA 90 bp GCCGGCACCCCTCCTGCTTGCTCAGCGCGCAGTACCAGCCGGGCCTaGAGGTGCAGATGCGGTTCTGTTCCCGAGTGCAGGCTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: AGTPPACSARSTSRA*RCRCGSVPECRLEF
Trigger: AAACTCAAGCCTGCACTCGGGAACAGAACCGCATCTGCACCTGCAGGCCCGGCTGGTACTGCGCGCTGAGCAAGCAGGAGGGGTGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS CCA 90 bp GCCAGGGCTCAGCCCACCTTGGCTACGACACAGCCCACACCGGCCTaGTTAACTGGGCTTCATCCCAGCATCAGGCACTCCAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: ARAQPTLATTQPTPA*LTGLHPSIRHSKGQ
Trigger: CTGCCCCTTGGAGTGCCTGATGCTGGGATGAAGCCCAGTTAACCAGGCCGGTGTGGGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 90 bp AGTACCAGCCGGGCCTGCAGGTGCAGATGCGGTTCTGTTCCCGAGTaGAGGCTTGAGTTTCCACCTGGTCAGAGCTACAGCGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: STSRACRCRCGSVPE*RLEFPPGQSYSGSH
Trigger: GTGGCTCCCGCTGTAGCTCTGACCAGGTGGAAACTCAAGCCTGCACTCGGGAACAGAACCGCATCTGCACCTGCAGGCCCGGCTGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS GCA 90 bp GGGCCATACTCCGGGTGGGGGACGTGGACGTGCAGACTGCATCCATaGTTGCATTCCCAGGGATGGCCACCACGTTACAGATCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GPYSGWGTWTCRLHP*LHSQGWPPRYRSGG
Trigger: CCCACCAGATCTGTAACGTGGTGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCACGTCCACGTCCCCCACCCGGAGTATGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CCA 90 bp GCCCATTGGGAGCAGGAAGGAGGTGCTTGGAGCAGTGCTGGGTTCTaGAGTTGGCTGCGTGTGTTGGGATCGTGTGGACACTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AHWEQEGGAWSSAGF*SWLRVLGSCGHWLG
Trigger: CCCCAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTCCTGCTCCCAATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 90 bp GGCTGGGGCCCATTGGGAGCAGGAAGGAGGTGCTTGGAGCAGTGCTaGGTTCTGGAGTTGGCTGCGTGTGTTGGGATCGTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: GWGPLGAGRRCLEQC*VLELAACVGIVWTL
Trigger: CAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTCCTGCTCCCAATGGGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 90 bp TCAGCCCACCTTGGCTACGACACAGCCCACACCGGCCTGGTTAACTaGGCTTCATCCCAGCATCAGGCACTCCAAGGGGCAGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SAHLGYDTAHTGLVN*ASSQHQALQGAGAS
Trigger: AGAAGCCCCTGCCCCTTGGAGTGCCTGATGCTGGGATGAAGCCCAGTTAACCAGGCCGGTGTGGGCTGTGTCGTAGCCAAGGTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS-3UTR CAA 90 bp CATGCCCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCATGGTACAGAAGACTTTaGCATGTTGGCCCGGCGAGC +
Preference number: 5 (lower is better)
Translates to: HAPNVHAQPAFREGHAMAWYRRL*HVGPAS
Trigger: GCTCGCCGGGCCAACATGCAAAAGTCTTCTGTACCA...TGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp TGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAGGCTTTCCACAAGTGGATGAAGTCGTGTaGGAGAACGTCCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: CPASLPRGTRHGSRGFPQVDEVV*ENVPGA
Trigger: TGCCCCGGGGACGTTCTCCAACACGACTTCATCCAC...TTGTGGAAAGCCTCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS TCA 90 bp CTTCTCTTCGGTGCTCCCCAGCAGGGTCTCTGGCGTCTCCAGCTGTaGCCGAAAGGCACATTCCTCCTTGGAGAAGGGGACCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: LLFGAPQQGLWRLQL*PKGTFLLGEGDLLV
Trigger: GACGAGCAGGTCCCCTTCTCCAAGGAGGAATGTGCCTTTCGGTCACAGCTGGAGACGCCAGAGACCCTGCTGGGGAGCACCGAAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 90 bp CCGTGGATGAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTTaGACACCACGTCTGATGTTTCAGTTCCTGGTCTGGCCACGCCGA +
Preference number: 5 (lower is better)
Translates to: PWMKSCWRTSPGHRA*TPRLMFQFLVWPRR
Trigger: TCGGCGTGGCCAGACCAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTCATCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 90 bp GAGGTGCTTGGAGCAGTGCTGGGTTCTGGAGTTGGCTGCGTGTGTTaGGATCGTGTGGACACTGGCTGGGGTAAGTGTACTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EVLGAVLGSGVGCVC*DRVDTGWGKCTAPG
Trigger: CCCAGGGGCAGTACACTTACCCCAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS-3UTR CAA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGAGTTGGCTGCGTGTGTaGGGATCGTGTGGACACTGG +
Preference number: 5 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRSWLRV*GSCGHW
Trigger: CCAGTGTCCACACGATCCCAACACACGCAGCCAACT...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp CCCCACAGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAGGGCTCAGCCCACCTaGGCTACGACACAGCCCACA +
Preference number: 5 (lower is better)
Translates to: PHRVSKFIASRLCPVMPRRAQPT*ATTQPT
Trigger: TGTGGGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCT...CCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp AACCTGCTTCCTCCCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGCAGAGAGTCAGGGACTaGCCCCAGCATGCCCCGAAC +
Preference number: 5 (lower is better)
Translates to: NLLPPRIRARLHWFPLCRQRVRD*PQHAPN
Trigger: GTTCGGGGCATGCTGGGGCAAGTCCCTGACTCTCTG...CCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGGGAGGAAGCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp CCCGAACGTCCATGCCCAGCCAGCCTTCCGAGAGGGACACGCCATGGCAGCAGAAGTTTGGCTTTGTCGTaGGCTTGTTGGCCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: PERPCPASLPRGTRHGSRSLALS*ACWPEW
Trigger: CCACTCAGGCCAACAAGCCAACGACAAAGCCAAACT...TCTGCTGCCATGGCGTGTCCCTCTCGGAAGGCTGGCTGGGCATGGACGTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp CCAGAATCCGGGCAAGGCTACACTGGTTTCCCCTCTGCAGGGCCCTGGCCCTGGTGGCAGAGTTTGGCTTaGTCGTTGGCTTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PESGQGYTGFPSAGPWPWWQSLA*SLACWP
Trigger: AGGCCAACAAGCCAACGACAAAGCCAAACTCTGCCA...CCAGGGCCAGGGCCCTGCAGAGGGGAAACCAGTGTAGCCTTGCCCGGATTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGAATCTGTGTCTCCCATaGTGGAGCTGGCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRNLCLP*WSWLGR
Trigger: CCTCCCAAGCCAGCTCCACAATGGGAGACACAGATT...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS CCA 90 bp TGGTCAGAGCTGCTACAGACGTTCACGATGCAGGTGACATTGACCTaGGTCCCATGGCCACCAGGGGAAGAATCTGAGCTCCCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WSELLQTFTMQVTLT*VPWPPGEESELPVL
Trigger: CAGCACCGGGAGCTCAGATTCTTCCCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS-3UTR CAA 90 bp CCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGTAGCTGGGACTATAGGCCCGGGGCACAGGGCTaGCACACCACGTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: PGFKRFPSLRLLSSWDYRPGAQG*HTTSDV
Trigger: AACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGG...CCTATAGTCCCAGCTACTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp CCTGCAACCTCCGCTTCCCGGGTTCAAACGATTTCCCAGCCTCAGGCTTCTGAGACGATGCAGGTGACATaGACCTGGGTCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: PATSASRVQTISQPQASETMQVT*TWVPWP
Trigger: TGGCCATGGGACCCAGGTCAATGTCACCTGCATCGT...CTCAGAAGCCTGAGGCTGGGAAATCGTTTGAACCCGGGAAGCGGAGGTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp GAGTGCAGTGGCGTGATCTCGGCTCCCTGCAACCTCCGCTTCCCGGGTTCAAACACACAAGACTGGCACTaGGGATCACACTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: ECSGVISAPCNLRFPGSNTQDWH*GSHWPC
Trigger: ACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGT...GTTTGAACCCGGGAAGCGGAGGTTGCAGGGAGCCGAGATCACGCCACTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS GCA 90 bp CACAGCTCAAGCACTCGGGAACCCAGTTCCAGAGCTGGGTGTATGTaGTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: HSSSTREPSSRAGCM*CPHRSHTRCPRSWY
Trigger: GTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACACCCAGCTCTGGAACTGGGTTCCCGAGTGCTTGAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS GCA 90 bp AGCAGGAAGGAGGTGCTTGGAGCAGTGCTGGGTTCTGGAGTTGGCTaGGTGTGTTGGGATCGTGTGGACACTGGCTGGGGTAAGTGTACT +
Preference number: 5 (lower is better)
Translates to: SRKEVLGAVLGSGVG*VCWDRVDTGWGKCT
Trigger: AGTACACTTACCCCAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS-3UTR CAA 90 bp GGTGCGCTCCATCATGTCCTCATGTGGGTCCAATGTGGGCAGAAACCTGGCCAGAGACTGCATCCATGCTaGCATTCCCAGGGATGGCCA +
Preference number: 5 (lower is better)
Translates to: GALHHVLMWVQCGQKPGQRLHPC*HSQGWP
Trigger: TGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCT...CTGGCCAGGTTTCTGCCCACATTGGACCCACATGAGGACATGATGGAGCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS GCA 90 bp CCGTGGATGAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTTaGACACCACGTCTGATGTTTCAGTTCCTTCAGGGAACAATCCGA +
Preference number: 5 (lower is better)
Translates to: PWMKSCWRTSPGHRA*TPRLMFQFLQGTIR
Trigger: TCGGATTGTTCCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTCATCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CCA 90 bp GTGTCTCCCATTGTGGAGCTGGCTTGGGAGGAGCACTGTGAGCTGTaGTCAGAGCTGCTACAGACGTTCACGATGCAGGTGACATTGACC +
Preference number: 5 (lower is better)
Translates to: VSPIVELAWEEHCEL*SELLQTFTMQVTLT
Trigger: GGTCAATGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCACAGCTCACAGTGCTCCTCCCAAGCCAGCTCCACAATGGGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 90 bp TGTATGTGCTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTTaGTACAGAAGACTTTTGCATGTTGGCCTGGGCGGGCAAGGCGTG +
Preference number: 5 (lower is better)
Translates to: CMCCPHRSHTRCPRS*YRRLLHVGLGGQGV
Trigger: CACGCCTTGCCCGCCCAGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492361.1
CDS TCA 90 bp CGTGTTGGAGAACGTCCCCGGGGCACAGGGCTTGCACACCACGTCTaGTGTTTCAGTTCCTTCAGGGAACAATCCGAACTTGTCAACCAC +
Preference number: 5 (lower is better)
Translates to: RVGERPRGTGLAHHV*CFSSFREQSELVNH
Trigger: GTGGTTGACAAGTTCGGATTGTTCCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CCA 90 bp TGTATGTGCTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTTaGTACAGAAGACTTTTGCATGTTGGCCCGGCGAGCATTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CMCCPHRSHTRCPRS*YRRLLHVGPASICC
Trigger: GCAGCAAATGCTCGCCGGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000536782.2
CDS-3UTR CAA 90 bp AGAGTCTCCAAATTCATCGCTTCCCGGCTCTGCCCTGTGATGCCAAGGAAGCCTTGTGGCTGGCAGAGTTaGGCTTTGTCGTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: RVSKFIASRLCPVMPRKPCGWQS*ALSLAC
Trigger: ACAAGCCAACGACAAAGCCAAACTCTGCCAGCCACA...AGGCTTCCTTGGCATCACAGGGCAGAGCCGGGAAGCGATGAATTTGGAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp GCCATGGCAGCAGAGGCTTTCCACAACTCGCTGCCTCTGCTCTTGGCCTGCAGGCAGTGCAAACTTTCATaGTCTTGGGATCAACACACA +
Preference number: 5 (lower is better)
Translates to: AMAAEAFHNSLPLLLACRQCKLS*SWDQHT
Trigger: TGTGTGTTGATCCCAAGACAATGAAAGTTTGCACTG...CCTGCAGGCCAAGAGCAGAGGCAGCGAGTTGTGGAAAGCCTCTGCTGCCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATCGGCACCCCTCCTGCTaGCTCAGCGCGCAGTACCAG +
Preference number: 5 (lower is better)
Translates to: NRFIDKQECRPAYSANFHRHPSC*LSAQYQ
Trigger: CTGGTACTGCGCGCTGAGCAAGCAGGAGGGGTGCCG...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp CGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCAAACTTTCATTGTCTaGGGATCAACACACACACAC +
Preference number: 5 (lower is better)
Translates to: RNTDADTRLALGITLAMYQTFIV*GSTHTH
Trigger: GTGTGTGTGTGTTGATCCCAAGACAATGAAAGTTTG...GTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCAAGGCACATTCCTCCTaGGAGAAGGGGACCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVKAHSS*EKGTCS
Trigger: CGAGCAGGTCCCCTTCTCCAAGGAGGAATGTGCCTT...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp AACAGGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTTCCCGAGTGCAGGCTaGAGTTTCCACCTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: NRFIDKQECRPAYSANFHFPSAG*SFHLVR
Trigger: TCTGACCAGGTGGAAACTCAAGCCTGCACTCGGGAA...ATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS-3UTR CAA 90 bp GGTTTATTGATAAGCAGGAATGCCGTCCAGCATACAGTGCAAACTTTCATTGTCACGGTGTCCGAGGTCTaGGTACAGAAGACTTTTGCA +
Preference number: 5 (lower is better)
Translates to: GLLISRNAVQHTVQTFIVTVSEV*VQKTFA
Trigger: TGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGT...GACAATGAAAGTTTGCACTGTATGCTGGACGGCATTCCTGCTTATCAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376259.7
CDS GCA 72 bp GGTCTGGTCTGGCCACGCCGAAGCCCGGGCGGCACTTaGGCAGCGGCGCGCACAGCCGGCACCCCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GLVWPRRSPGGT*AAARTAGTPPA
Trigger: AGCAGGAGGGGTGCCGGCTGTGCGCGCCGCTGCGCAAGTGCCGCCCGGGCTTCGGCGTGGCCAGACCAGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489921.1
ENST00000536782.2
CDS GCA 72 bp TTCCTGGTCTGGCCACGCCGAAGCCCGGGCGGCACTTaGGCAGCGGCGCGCACAGCCGGCACCCCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: FLVWPRRSPGGT*AAARTAGTPPA
Trigger: AGCAGGAGGGGTGCCGGCTGTGCGCGCCGCTGCGCAAGTGCCGCCCGGGCTTCGGCGTGGCCAGACCAGGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp CTCCCCGGCCCCACTGGCCTCCACGCCTGGTGCCTGTaGCTGGTTCCGAGTGGGCGCCCTTCTGTCCAACGC +
Preference number: 6 (lower is better)
Translates to: LPGPTGLHAWCL*LVPSGRPSVQR
Trigger: GCGTTGGACAGAAGGGCGCCCACTCGGAACCAGCCACAGGCACCAGGCGTGGAGGCCAGTGGGGCCGGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp CTGCTGGAGCTCGGCGCTGTGATCAGCAGGTGCTGCTaGTCGGGGCCCTGTGTACCCCGGGCCTTATCGGCA +
Preference number: 6 (lower is better)
Translates to: LLELGAVISRCC*SGPCVPRALSA
Trigger: TGCCGATAAGGCCCGGGGTACACAGGGCCCCGAGCAGCAGCACCTGCTGATCACAGCGCCGAGCTCCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp CTGCTGCTGGAGCTCGGCGCTGTGATCAGCAGGTGCTaGTGCTCGGGGCCCTGTGTACCCCGGGCCTTATCG +
Preference number: 6 (lower is better)
Translates to: LLLELGAVISRC*CSGPCVPRALS
Trigger: CGATAAGGCCCGGGGTACACAGGGCCCCGAGCAGCAGCACCTGCTGATCACAGCGCCGAGCTCCAGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp GAAGACTTTTGCATGTTGGCCTGGGCGGGCAAGGCGTaGGCCGCAGCCCAGAGCTCCAGTCCGACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: EDFCMLAWAGKA*AAAQSSSPTAS
Trigger: GCTGGCCGTCGGACTGGAGCTCTGGGCTGCGGCGCACGCCTTGCCCGCCCAGGCCAACATGCAAAAGTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492361.1
CDS CCA 72 bp TGGCCTCCACGCCTGGTGCCTGTGGCTGGTTCCGAGTaGGCGCCCTTCTGTCCAACGCACTGGCCGAGCTCT +
Preference number: 6 (lower is better)
Translates to: WPPRLVPVAGSE*APFCPTHWPSS
Trigger: AGAGCTCGGCCAGTGCGTTGGACAGAAGGGCGCCCACTCGGAACCAGCCACAGGCACCAGGCGTGGAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp CCTCCTGCTTGCTCAGCGCGCAGTACCAGCCGGGCCTaGAGGTGCAGATGCGGTTCTGTTCCCGAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: PPACSARSTSRA*RCRCGSVPECR
Trigger: CCTGCACTCGGGAACAGAACCGCATCTGCACCTGCAGGCCCGGCTGGTACTGCGCGCTGAGCAAGCAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS CAA 90 bp ACCAGGGCCCCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTaGGCTACGACACAGCCCACACCGGCCTGGTTAACTGGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: TRAPSQGHPARAQPT*ATTQPTPAWLTGLH
Trigger: ATGAAGCCCAGTTAACCAGGCCGGTGTGGGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGGGGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp GGCCATACTCCGGGTGGGGGACGTGGACGTGCAGACTaGATCCATGCTTGCATTCCCAGGGATGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: GHTPGGGRGRAD*IHACIPRDGHH
Trigger: GTGGTGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCACGTCCACGTCCCCCACCCGGAGTATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CAA 72 bp CCTTCGCAGGGTCATCCTGCCAGGGCTCAGCCCACCTaGGCTACGACACAGCCCACACCGGCCTGGTTAACT +
Preference number: 6 (lower is better)
Translates to: PSQGHPARAQPT*ATTQPTPAWLT
Trigger: AGTTAACCAGGCCGGTGTGGGCTGTGTCGTAGCCAAGGTGGGCTGAGCCCTGGCAGGATGACCCTGCGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp GCGTCTCCAGCTGTGACCGAAAGGCACATTCCTCCTTaGAGAAGGGGACCTGCTCGTCCTTCGGGGACTCCG +
Preference number: 6 (lower is better)
Translates to: ASPAVTERHIPP*RRGPARPSGTP
Trigger: CGGAGTCCCCGAAGGACGAGCAGGTCCCCTTCTCCAAGGAGGAATGTGCCTTTCGGTCACAGCTGGAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp CAGCCCACCTTGGCTACGACACAGCCCACACCGGCCTaGTTAACTGGGCTTCATCCCAGCATCAGGCACTCC +
Preference number: 6 (lower is better)
Translates to: QPTLATTQPTPA*LTGLHPSIRHS
Trigger: GGAGTGCCTGATGCTGGGATGAAGCCCAGTTAACCAGGCCGGTGTGGGCTGTGTCGTAGCCAAGGTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 72 bp GGCGTCTCCAGCTGTGACCGAAAGGCACATTCCTCCTaGGAGAAGGGGACCTGCTCGTCCTTCGGGGACTCC +
Preference number: 6 (lower is better)
Translates to: GVSSCDRKAHSS*EKGTCSSFGDS
Trigger: GGAGTCCCCGAAGGACGAGCAGGTCCCCTTCTCCAAGGAGGAATGTGCCTTTCGGTCACAGCTGGAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 90 bp TCCGTGGATGAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTaGCACACCACGTCTGATGTTTCAGTTCCTGGTCTGGCCACGCCG +
Preference number: 6 (lower is better)
Translates to: SVDEVVLENVPGAQG*HTTSDVSVPGLATP
Trigger: CGGCGTGGCCAGACCAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTCATCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp CGGGCCTGCAGGTGCAGATGCGGTTCTGTTCCCGAGTaGAGGCTTGAGTTTCCACCTGGTCAGAGCTACAGC +
Preference number: 6 (lower is better)
Translates to: RACRCRCGSVPE*RLEFPPGQSYS
Trigger: GCTGTAGCTCTGACCAGGTGGAAACTCAAGCCTGCACTCGGGAACAGAACCGCATCTGCACCTGCAGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS GCA 72 bp TCCGGGTGGGGGACGTGGACGTGCAGACTGCATCCATaGTTGCATTCCCAGGGATGGCCACCACGTTACAGA +
Preference number: 6 (lower is better)
Translates to: SGWGTWTCRLHP*LHSQGWPPRYR
Trigger: TCTGTAACGTGGTGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCACGTCCACGTCCCCCACCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CCA 72 bp GGGACTCCGAGGGGCTGGAATCTGTGTCTCCCATTGTaGAGCTGGCTTGGGAGGAGCACTGTGAGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: GTPRGWNLCLPL*SWLGRSTVSCG
Trigger: ACCACAGCTCACAGTGCTCCTCCCAAGCCAGCTCCACAATGGGAGACACAGATTCCAGCCCCTCGGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS TCA 72 bp CAGGTGCAGATGCGGTTCTGTTCCCGAGTGCAGGCTTaGGTTTCCACCTGGTCAGAGCTACAGCGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: QVQMRFCSRVQA*VSTWSELQREP
Trigger: TGGCTCCCGCTGTAGCTCTGACCAGGTGGAAACTCAAGCCTGCACTCGGGAACAGAACCGCATCTGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS GCA 72 bp AGCACTCGGGAACCCAGTTCCAGAGCTGGGTGTATGTaGTGTCCTCACAGGAGTCACACACGGTGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: STREPSSRAGCM*CPHRSHTRCPR
Trigger: CCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACACCCAGCTCTGGAACTGGGTTCCCGAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000492361.1
ENST00000536782.2
CDS GCA 72 bp GGTGGGGGACGTGGACGTGCAGACTGCATCCATGCTTaGATTCCCAGGGATGGCCACCACGTTACAGATCTG +
Preference number: 6 (lower is better)
Translates to: GGGRGRADCIHA*IPRDGHHVTDL
Trigger: CAGATCTGTAACGTGGTGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCACGTCCACGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CCA 72 bp GAAGGAGGTGCTTGGAGCAGTGCTGGGTTCTGGAGTTaGCTGCGTGTGTTGGGATCGTGTGGACACTGGCTG +
Preference number: 6 (lower is better)
Translates to: EGGAWSSAGFWS*LRVLGSCGHWL
Trigger: CAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp CCATTGGGAGCAGGAAGGAGGTGCTTGGAGCAGTGCTaGGTTCTGGAGTTGGCTGCGTGTGTTGGGATCGTG +
Preference number: 6 (lower is better)
Translates to: PLGAGRRCLEQC*VLELAACVGIV
Trigger: CACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTCCTGCTCCCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 90 bp TTGGGAGCAGGAAGGAGGTGCTTGGAGCAGTGCTGGGTTCTGGAGTaGGCTGCGTGTGTTGGGATCGTGTGGACACTGGCTGGGGTAAGT +
Preference number: 6 (lower is better)
Translates to: LGAGRRCLEQCWVLE*AACVGIVWTLAGVS
Trigger: ACTTACCCCAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCCAAGCACCTCCTTCCTGCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 90 bp GAGCTGTGGTCAGAGCTGCTACAGACGTTCACGATGCAGGTGACATaGACCTGGGTCCCATGGCCACCAGGGGAAGAATCTGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: ELWSELLQTFTMQVT*TWVPWPPGEESELP
Trigger: CGGGAGCTCAGATTCTTCCCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS GCA 72 bp AAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTTaGACACCACGTCTGATGTTTCAGTTCCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: KSCWRTSPGHRA*TPRLMFQFLVW
Trigger: CCAGACCAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp GGAGCAGTGCTGGGTTCTGGAGTTGGCTGCGTGTGTTaGGATCGTGTGGACACTGGCTGGGGTAAGTGTACT +
Preference number: 6 (lower is better)
Translates to: GAVLGSGVGCVC*DRVDTGWGKCT
Trigger: AGTACACTTACCCCAGCCAGTGTCCACACGATCCCAACACACGCAGCCAACTCCAGAACCCAGCACTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 72 bp GAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTaGCACACCACGTCTGATGTTTCAGTTCCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: EVVLENVPGAQG*HTTSDVSVPGL
Trigger: CAGACCAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 72 bp GAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTaGCACACCACGTCTGATGTTTCAGTTCCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: EVVLENVPGAQG*HTTSDVSVPSG
Trigger: CCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CAA 90 bp TCCGTGGATGAAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTaGCACACCACGTCTGATGTTTCAGTTCCTTCAGGGAACAATCCG +
Preference number: 6 (lower is better)
Translates to: SVDEVVLENVPGAQG*HTTSDVSVPSGNNP
Trigger: CGGATTGTTCCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTTCATCCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CAA 90 bp GTGTATGTGCTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTaGGTACAGAAGACTTTTGCATGTTGGCCTGGGCGGGCAAGGCGT +
Preference number: 6 (lower is better)
Translates to: VYVLSSQESHTVSEV*VQKTFACWPGRARR
Trigger: ACGCCTTGCCCGCCCAGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492361.1
CDS GCA 72 bp AAGTCGTGTTGGAGAACGTCCCCGGGGCACAGGGCTTaGACACCACGTCTGATGTTTCAGTTCCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: KSCWRTSPGHRA*TPRLMFQFLQG
Trigger: TCCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTCTCCAACACGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CCA 72 bp TGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTTaGTACAGAAGACTTTTGCATGTTGGCCCGGCGAGC +
Preference number: 6 (lower is better)
Translates to: CPHRSHTRCPRS*YRRLLHVGPAS
Trigger: GCTCGCCGGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000536782.2
CDS CCA 72 bp ACGTGCAGACTGCATCCATGCTTGCATTCCCAGGGATaGCCACCACGTTACAGATCTGGTGGGGCCTGCAAA +
Preference number: 6 (lower is better)
Translates to: TCRLHPCLHSQG*PPRYRSGGACK
Trigger: TTTGCAGGCCCCACCAGATCTGTAACGTGGTGGCCATCCCTGGGAATGCAAGCATGGATGCAGTCTGCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CCA 72 bp CTGCTACAGACGTTCACGATGCAGGTGACATTGACCTaGGTCCCATGGCCACCAGGGGAAGAATCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: LLQTFTMQVTLT*VPWPPGEESEL
Trigger: GAGCTCAGATTCTTCCCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTGCATCGTGAACGTCTGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp ATTGTGGAGCTGGCTTGGGAGGAGCACTGTGAGCTGTaGTCAGAGCTGCTACAGACGTTCACGATGCAGGTG +
Preference number: 6 (lower is better)
Translates to: IVELAWEEHCEL*SELLQTFTMQV
Trigger: CACCTGCATCGTGAACGTCTGTAGCAGCTCTGACCACAGCTCACAGTGCTCCTCCCAAGCCAGCTCCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CCA 72 bp TGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTTaGTACAGAAGACTTTTGCATGTTGGCCTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: CPHRSHTRCPRS*YRRLLHVGLGG
Trigger: CCCGCCCAGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492361.1
CDS CAA 72 bp CTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTaGGTACAGAAGACTTTTGCATGTTGGCCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: LSSQESHTVSEV*VQKTFACWPGE
Trigger: CTCGCCGGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000536782.2
CDS CAA 72 bp CTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTaGGTACAGAAGACTTTTGCATGTTGGCCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: LSSQESHTVSEV*VQKTFACWPGR
Trigger: CCGCCCAGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492361.1
CDS TCA 72 bp GAACGTCCCCGGGGCACAGGGCTTGCACACCACGTCTaGTGTTTCAGTTCCTTCAGGGAACAATCCGAACTT +
Preference number: 6 (lower is better)
Translates to: ERPRGTGLAHHV*CFSSFREQSEL
Trigger: AAGTTCGGATTGTTCCCTGAAGGAACTGAAACATCAGACGTGGTGTGCAAGCCCTGTGCCCCGGGGACGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS GCA 72 bp CAGGGATGGCCACCACGTTACAGATCTGGTGGGGCCTaGAAATATCCGTGGATGAAGTCGTGTTGGAGAACG +
Preference number: 6 (lower is better)
Translates to: QGWPPRYRSGGA*KYPWMKSCWRT
Trigger: CGTTCTCCAACACGACTTCATCCACGGATATTTGCAGGCCCCACCAGATCTGTAACGTGGTGGCCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376259.7
ENST00000489921.1
ENST00000492361.1
CDS CAA 72 bp TCAGAGCTGCTACAGACGTTCACGATGCAGGTGACATaGACCTGGGTCCCATGGCCACCAGGGGAAGAATCT +
Preference number: 6 (lower is better)
Translates to: SELLQTFTMQVT*TWVPWPPGEES
Trigger: AGATTCTTCCCCTGGTGGCCATGGGACCCAGGTCAATGTCACCTGCATCGTGAACGTCTGTAGCAGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000492361.1
CDS CAA 90 bp GTGTATGTGCTGTCCTCACAGGAGTCACACACGGTGTCCGAGGTCTaGGTACAGAAGACTTTTGCATGTTGGCCCGGCGAGCATTTGCTG +
Preference number: 6 (lower is better)
Translates to: VYVLSSQESHTVSEV*VQKTFACWPGEHLL
Trigger: CAGCAAATGCTCGCCGGGCCAACATGCAAAAGTCTTCTGTACCAAGACCTCGGACACCGTGTGTGACTCCTGTGAGGACAGCACATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376259.7
ENST00000536782.2
CDS CAA 90 bp CACACCACGTCTGATGTTTCAGTTCCTTCAGGGAACAATCCGAACTaGTCAACCACTCAGACACTCTGCGGGACAGCTGGGCCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: HTTSDVSVPSGNNPN*STTQTLCGTAGPWH
Trigger: GTGCCAAGGCCCAGCTGTCCCGCAGAGTGTCTGAGTGGTTGACAAGTTCGGATTGTTCCCTGAAGGAACTGAAACATCAGACGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489921.1
CDS CAA 72 bp TCTGATGTTTCAGTTCCTTCAGGGAACAATCCGAACTaGTCAACCACTCAGACACTCTGCGGGACAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SDVSVPSGNNPN*STTQTLCGTAG
Trigger: CCCAGCTGTCCCGCAGAGTGTCTGAGTGGTTGACAAGTTCGGATTGTTCCCTGAAGGAACTGAAACATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489921.1