RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMPRSS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160183

Ensembl transcript IDs: ENST00000398397.3, ENST00000398405.5, ENST00000433957.7, ENST00000474596.5, ENST00000476848.5, ENST00000478680.1, ENST00000482761.1, ENST00000644384.2, ENST00000652415.1

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGG +
Preference number: 1 (lower is better)
Translates to: FGPATGAGTQSSKGV*SCAGSYTGVQGRIG
Trigger: CCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 90 bp TGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTaGAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: CYWCRNSELQGCLLV*RFLHGSPGEDRAVF
Trigger: GAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 90 bp TGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: CWNQMEGCLFRACYW*RNSELQGCLLVCRF
Trigger: GAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 90 bp TTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: LCWNQMEGCLFRACY*CRNSELQGCLLVCR
Trigger: CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 90 bp GGGTGGGTTTGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGCTGGTGCGTCTTTTCTGAGTGGCTG +
Preference number: 1 (lower is better)
Translates to: GWVWFWSLEMKTCSD*SSALLGWCVFSEWL
Trigger: CAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCAAACCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 90 bp GAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCA +
Preference number: 1 (lower is better)
Translates to: EMKTCSDCSSALLGW*VFSEWLLVALHVRS
Trigger: TGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 90 bp CTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGGGCTaGTGCGTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGG +
Preference number: 1 (lower is better)
Translates to: LEMKTCSDCSSALLG*CVFSEWLLVALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR TCA 90 bp TGGGCTGGTGCGTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTaGGGTCACATAACTGCTTATCTCGTCAGGAATTTTGCAAGACCC +
Preference number: 1 (lower is better)
Translates to: WAGASFLSGCWWLCT*GHITAYLVRNFARP
Trigger: GGGTCTTGCAAAATTCCTGACGAGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 90 bp AGTGACTGCAGTTCTGCACTTCTGGGCTGGTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATCT +
Preference number: 1 (lower is better)
Translates to: SDCSSALLGWCVFSE*LLVALHVRSHNCLS
Trigger: AGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: IRWKGASFGPATGAGTQSPQELR*LLVPFL
Trigger: GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAPQELR*LLVPFL
Trigger: GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGG...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPSSKGV*SCAGSY
Trigger: GTAGGAACCTGCACACGAGCAGACACCCTTGGAGCT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLRACYW*RNSELQ
Trigger: TTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CAA 90 bp AGATGGACCAGTGGGAAAGGCCGCCCTTGCAAGTTGCTGCTTCTTTaGTTCTTAGTGAAGATCAGAAAGGAGCGTGAGGCTAGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: RWTSGKGRPCKLLLL*FLVKIRKEREARRG
Trigger: ACCACGCCTAGCCTCACGCTCCTTTCTGATCTTCACTAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCCACTGGTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CAA 90 bp TGCAGTTCTGCACTTCTGGGCTGGTGCGTCTTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATCTCGTCAG +
Preference number: 2 (lower is better)
Translates to: CSSALLGWCVFSEWL*VALHVRSHNCLSRQ
Trigger: CTGACGAGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATGCCTCTTTCGGGCCTaGTACTGGTGCCGGAACTCA +
Preference number: 2 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLCLFRA*YWCRNS
Trigger: TGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCA...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLFRACY*CRNSEL
Trigger: GAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAA...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CAA 90 bp GCACTTCTGGGCTGGTGCGTCTTTTCTGAGTGGCTGTTGGTGGCTTaGCACGTGAGGTCACATAACTGCTTATCTCGTCAGGAATTTTGC +
Preference number: 2 (lower is better)
Translates to: ALLGWCVFSEWLLVA*HVRSHNCLSRQEFC
Trigger: GCAAAATTCCTGACGAGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGTGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGG +
Preference number: 2 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGCAGIR*KGASFG
Trigger: CCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACA...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCTGCCTCTTTCGGGCCTaGTACTGGTGCCGGAACTCA +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVCLFRA*YWCRNS
Trigger: TGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCA...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCCAGGGATTTCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVQGFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGAAATCCCTG...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVSSKGV*SCAGSY
Trigger: GTAGGAACCTGCACACGAGCAGACACCCTTGGAGCT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAA +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVNQMDQ*ERPPLQ
Trigger: TTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR TCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAGCAGGCACATCATTTaGGGTCAGGGGTTTGAGAGC +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVSRHII*GQGFES
Trigger: GCTCTCAAACCCCTGACCTCAAATGATGTGCCTGCT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGCAGTTCTGCACTTCTaGGCTGGTGCGTCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVAVLHF*AGASFL
Trigger: CAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR TCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGATGAAAACGTGCAGTaGCTGCAGTTCTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVDENVQ*LQFCTS
Trigger: AGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR GCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGGGAAAGGCCGCCCTTaGAAGTTGCTGCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: GKETYYLESKDNNTSSTKGKGRP*KLLLLL
Trigger: CAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
3UTR-3UTR GCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGCAGTTCTGCACTTCTaGGCTGGTGCGTCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: GKETYYLESKDNNTSSTKAVLHF*AGASFL
Trigger: CAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
3UTR-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp TGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTaGAGGTTCCTACACGGGAGTCCAGGGGAGGATCGG +
Preference number: 3 (lower is better)
Translates to: CRNSELQGCLLV*RFLHGSPGEDR
Trigger: CCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp GCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: ATGAGTQSSKGV*SCAGSYTGVQG
Trigger: CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp CAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTG +
Preference number: 3 (lower is better)
Translates to: QMEGCLFRACYW*RNSELQGCLLV
Trigger: CACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 72 bp AATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: NQMEGCLFRACY*CRNSELQGCLL
Trigger: GAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp ACGTGCAGTGACTGCAGTTCTGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: TCSDCSSALLGW*VFSEWLLVALH
Trigger: GTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACTGCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 72 bp AACAAAAAGCAGCTTGAAGGTTGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCC +
Preference number: 3 (lower is better)
Translates to: NKKQLEGCAGIR*KGASFGPATGA
Trigger: GGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 72 bp TTGCAAGACCCCTGGAGAGAAAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAAGTTGCTGCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: LQDPWRENQMDQ*ERPPLQVAASF
Trigger: AAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTTTTCTCTCCAGGGGTCTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CCA 72 bp AGTTCTGCACTTCTGGGCTGGTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCACGTGAGGTCACATAAC +
Preference number: 3 (lower is better)
Translates to: SSALLGWCVFSE*LLVALHVRSHN
Trigger: GTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTTTGAGGTCAGGGGTTaGAGAGCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLFEVRG*RAAWPT
Trigger: TGTTGGCCAGGCTGCTCTCAAACCCCTGACCTCAAA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGCTGGTGCGTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: WFWSLEMKTCSD*SSALLGWCVFS
Trigger: AGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp TGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTTTGCAAGACCCCTGGA +
Preference number: 3 (lower is better)
Translates to: WLLVALHVRSHN*LSRQEFCKTPG
Trigger: TCCAGGGGTCTTGCAAAATTCCTGACGAGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CAA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGGCCGCCCTTGCAAGTaGCTGCTTCTTTTGTTCTTA +
Preference number: 3 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLGRPCK*LLLLFL
Trigger: TAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR GCA 72 bp GAGAAAACCAGATGGACCAGTGGGAAAGGCCGCCCTTaGAAGTTGCTGCTTCTTTTGTTCTTAGTGAAGATC +
Preference number: 3 (lower is better)
Translates to: EKTRWTSGKGRP*KLLLLLFLVKI
Trigger: GATCTTCACTAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CAA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGGCCGCCCTTGCAAGTaGCTGCTTCTTTTGTTCTTA +
Preference number: 3 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGGRPCK*LLLLFL
Trigger: TAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR TCA 72 bp GCGTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTaGGGTCACATAACTGCTTATCTCGTCAGGAATTTT +
Preference number: 3 (lower is better)
Translates to: ASFLSGCWWLCT*GHITAYLVRNF
Trigger: AAAATTCCTGACGAGATAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CAA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGATCTCGTCAGGAATTTaGCAAGACCCCTGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGISSGI*QDPWRE
Trigger: TTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGAT...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATTTGAGGTCAGGGGTTaGAGAGCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: GKETYYLESKDNNTSSTKFEVRG*RAAWPT
Trigger: TGTTGGCCAGGCTGCTCTCAAACCCCTGACCTCAAA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
3UTR-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGG +
Preference number: 3 (lower is better)
Translates to: GKETYYLESKDNNTSSTKFSEWL*VALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
3UTR-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAATCTCGTCAGGAATTTaGCAAGACCCCTGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: GKETYYLESKDNNTSSTKISSGI*QDPWRE
Trigger: TTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGAT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
3UTR-3UTR CAA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAAAACAAAAAGCAGCTaGAAGGTTGTGCTGGAATCA +
Preference number: 3 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVKTKSS*KVVLES
Trigger: TGATTCCAGCACAACCTTCAAGCTGCTTTTTGTTTT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGCCCCCGCTGTCCCCCTaGCAGCTGTCCACGCCACCC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRPPLSP*QLSTPP
Trigger: GGGTGGCGTGGACAGCTGCCAGGGGGACAGCGGGGG...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCCCCCGCTGTCCCCCTaGCAGCTGTCCACGCCACCC +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPPPLSP*QLSTPP
Trigger: GGGTGGCGTGGACAGCTGCCAGGGGGACAGCGGGGG...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTCCCCCGCTGTCCCCCTaGCAGCTGTCCACGCCACCC +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLPPLSP*QLSTPP
Trigger: GGGTGGCGTGGACAGCTGCCAGGGGGACAGCGGGGG...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGCATGGAGGGGGAGATaGTGCCACCGTACACGTCCC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRAWRGR*CHRTRP
Trigger: GGGACGTGTACGGTGGCATCATCTCCCCCTCCATGC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGGCATGGAGGGGGAGATaGTGCCACCGTACACGTCCC +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGAWRGR*CHRTRP
Trigger: GGGACGTGTACGGTGGCATCATCTCCCCCTCCATGC...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTTGGAGCACGGCATTCTaGCCACCCACCCGGACACAG +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARWSTAF*PPTRTQ
Trigger: CTGTGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCA...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAAGCGGAGGCTGCAGTaGGCAGGGATTTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCKRRLQ*AGISPL
Trigger: CAGTGGCGAAATCCCTGCTCACTGCAGCCTCCGCTT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGAACTCCTCCCGGAACTaGCCCTCCAGCGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRNSSRN*PSSELT
Trigger: AGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGTT...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCAGGGAAGCGGAGGCTaGAGTGAGCAGGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGQGSGG*SEQGFR
Trigger: GCGAAATCCCTGCTCACTGCAGCCTCCGCTTCCCTG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGCAGGGAAGCGGAGGCTaGAGTGAGCAGGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRQGSGG*SEQGFR
Trigger: GCGAAATCCCTGCTCACTGCAGCCTCCGCTTCCCTG...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGCAGGGAAGCGGAGGCTaGAGTGAGCAGGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRQGSGG*SEQGFR
Trigger: GCGAAATCCCTGCTCACTGCAGCCTCCGCTTCCCTG...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPKGTAA*FRTGEA
Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTT...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHKGTAA*FRTGEA
Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTT...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGSTKQL*TPGARH
Trigger: ATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGA...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCSTHDA*AVAPSM
Trigger: CATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGCATGGAGGGGGAGATaGTGCCACCGTACACGTCCC +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPAWRGR*CHRTRP
Trigger: GGGACGTGTACGGTGGCATCATCTCCCCCTCCATGC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCGTCCTCCCCGTCTTTaGAATCCGAGACTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCRPPRL*NPRLRH
Trigger: GTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCTCTGCGCAGCCGATaGCAAAGCTGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAPLRSR*QSWSLP
Trigger: TGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGG...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARRACYW*RNSELQ
Trigger: TTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTGCCTCTTTCGGGCCTaGTACTGGTGCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRCLFRA*YWCRNS
Trigger: TGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCA...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGCAGGGATTTCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRQGFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGAAATCCCTG...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCCTGAGCAGTCGAAGTaGATGCCCAGACCAATGGCC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCPEQSK*MPRPMA
Trigger: GGCCATTGGTCTGGGCATCCACTTCGACTGCTCAGG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRFRACY*CRNSEL
Trigger: GAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTTGGAGCACGGCATTCTaGCCACCCACCCGGACACAG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLWSTAF*PPTRTQ
Trigger: CTGTGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCA...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAGTCCAGGAAGGAGGTaGCACGGGTGTACACCCCAG +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGSPGRR*HGCTPQ
Trigger: CTGGGGTGTACACCCGTGTCACCTCCTTCCTGGACT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTAGTCCAGGAAGGAGGTaGCACGGGTGTACACCCCAG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPSPGRR*HGCTPQ
Trigger: CTGGGGTGTACACCCGTGTCACCTCCTTCCTGGACT...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCAGTCCAGGAAGGAGGTaGCACGGGTGTACACCCCAG +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSSPGRR*HGCTPQ
Trigger: CTGGGGTGTACACCCGTGTCACCTCCTTCCTGGACT...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAAGCGGAGGCTGCAGTaGGCAGGGATTTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGKRRLQ*AGISPL
Trigger: CAGTGGCGAAATCCCTGCTCACTGCAGCCTCCGCTT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCAACTCCTCCCGGAACTaGCCCTCCAGCGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSNSSRN*PSSELT
Trigger: AGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGTT...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAGGCTTGTTCACCTCTaGGCAGCCGATGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCRLVHL*AADAKA
Trigger: AGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAGGTCTCTCTCCATCTaGTCGTGGATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCRSLSI*SWIQSR
Trigger: CCTGGACTGGATCCACGAGCAGATGGAGAGAGACCT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRSSKGV*SCAGSY
Trigger: GTAGGAACCTGCACACGAGCAGACACCCTTGGAGCT...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPRACYW*RNSELQ
Trigger: TTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCG...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRALLGW*VFSEWL
Trigger: CAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGTGCAAGGTAACCACGTaGCCAGAGGCACATCCCTCC +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVCKVTT*PEAHPS
Trigger: GGAGGGATGTGCCTCTGGCCACGTGGTTACCTTGCA...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCTAGACCCACCTGGATaGTCCATGACTTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCLDPPG*SMTWGG
Trigger: ACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGKGTAA*FRTGEA
Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGCTCTCCATCTGCTCGTaGATCCAGTCCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRLSICS*IQSRKE
Trigger: CTCCTTCCTGGACTGGATCCACGAGCAGATGGAGAG...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGPQELR*LLVPFL
Trigger: GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCPQELR*LLVPFL
Trigger: GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCNQMDQ*ERPPLQ
Trigger: TTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGNQMDQ*ERPPLQ
Trigger: TTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGACATCTGTACTTCCCTaGGCAGTCGAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRTSVLP*AVEVDA
Trigger: GGCATCCACTTCGACTGCTCAGGGAAGTACAGATGT...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGACATCTGTACTTCCCTaGGCAGTCGAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRTSVLP*AVEVDA
Trigger: GGCATCCACTTCGACTGCTCAGGGAAGTACAGATGT...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTGGAGCACGGCATTCTaGCCACCCACCCGGACACAG +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLWSTAF*PPTRTQ
Trigger: CTGTGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRASTKQL*TPGARH
Trigger: ATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGA...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPSTHDA*AVAPSM
Trigger: CATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGA...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAGCAGGCACATCATTTaGGGTCAGGGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGSRHII*GQGFES
Trigger: GCTCTCAAACCCCTGACCTCAAATGATGTGCCTGCT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCTGGTGCGTCTTTTCTaGGTGGCTGTTGGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCLVRLF*VAVGGF
Trigger: AAAGCCACCAACAGCCACTCAGAAAAGACGCACCAG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCTGGTGCGTCTTTTCTaGGTGGCTGTTGGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGLVRLF*VAVGGF
Trigger: AAAGCCACCAACAGCCACTCAGAAAAGACGCACCAG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCGTCCTCCCCGTCTTTaGAATCCGAGACTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRARPPRL*NPRLRH
Trigger: GTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACG...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGGGCACAGGCAACATTTaGGTAGTGACCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRGTGNI*VVTLPV
Trigger: GACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCC...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCATGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPCFHPR*VSCSPF
Trigger: GAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACA...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCAGGGATTTCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSQGFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGAAATCCCTG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACCAGGGATTTCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHQGFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGAAATCCCTG...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAGTCATCGGAGCACATaGTCTTCCACGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCSHRST*SSTKQL
Trigger: CAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAGTCATCGGAGCACATaGTCTTCCACGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGSHRST*SSTKQL
Trigger: CAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGAGTCATCGGAGCACATaGTCTTCCACGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRSHRST*SSTKQL
Trigger: CAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACT...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGCTTGGGAAACCCAGTTaGGCACAGGCAACATTTGCG +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRLGKPS*AQATFA
Trigger: CGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAG...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCTTGGGAAACCCAGTTaGGCACAGGCAACATTTGCG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCLGKPS*AQATFA
Trigger: CGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRARGDR*TQTPPG
Trigger: TCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGGAAACTAGACCCACCTaGATGGTCCATGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGETRPT*MVHDLG
Trigger: CCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTC...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGAAACTAGACCCACCTaGATGGTCCATGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCETRPT*MVHDLG
Trigger: CCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCTCCACCAAGTGGGATaGGGCTGGATTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARLHQVG*GWIVQQ
Trigger: CTGTTGGACAATCCAGCCCCATCCCACTTGGTGGAG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCATCTTCTCCACCAAGTaGGATGGGGCTGGATTGTCC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCIFSTK*DGAGLS
Trigger: GGACAATCCAGCCCCATCCCACTTGGTGGAGAAGAT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGATCTTCTCCACCAAGTaGGATGGGGCTGGATTGTCC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRIFSTK*DGAGLS
Trigger: GGACAATCCAGCCCCATCCCACTTGGTGGAGAAGAT...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTACCCCCGCTGTCCCCCTaGCAGCTGTCCACGCCACCC +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLPPLSP*QLSTPP
Trigger: GGGTGGCGTGGACAGCTGCCAGGGGGACAGCGGGGG...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGAGCCGATGCCAAAGCTaGTCGCTCCCACTAACTTCC +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVSRCQS*SLPLTS
Trigger: GGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCT...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARPQELR*LLVPFL
Trigger: GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPFRACY*CRNSEL
Trigger: GAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAA...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCCAGIR*KGASFG
Trigger: CCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAAAATTAGTTGGGTGTaGTGGCGGGCACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGKISWV*WRAPVV
Trigger: GACCACAGGTGCCCGCCACCACACCCAACTAATTTT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTCATCTGGCAAGAGGTaGTCGATGGACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRSSGKR*SMDTNS
Trigger: GGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLSTHDA*AVAPSM
Trigger: CATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGA...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCACCTGGATGGTCCATaGCTTGGGGAGGTACAAGTC +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPHLDGP*LGEVQV
Trigger: GACTTGTACCTCCCCAAGTCATGGACCATCCAGGTG...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAAGCGGAGGCTGCAGTaGGCAGGGATTTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGKRRLQ*AGISPL
Trigger: CAGTGGCGAAATCCCTGCTCACTGCAGCCTCCGCTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTAGCAGGCACATCATTTaGGGTCAGGGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARSRHII*GQGFES
Trigger: GCTCTCAAACCCCTGACCTCAAATGATGTGCCTGCT...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTGCAGCAACAGCATCTaGATCTGGTGCAACAGGACT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCCSNSI*IWCNRT
Trigger: AGTCCTGTTGCACCAGATGCAGATGCTGTTGCTGCA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACAGCAGTCGAAGTGGATaGCCAGACCAATGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHSSRSG*PDQWPV
Trigger: CACTGGCCATTGGTCTGGGCATCCACTTCGACTGCT...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAACTCCTCCCGGAACTaGCCCTCCAGCGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGNSSRN*PSSELT
Trigger: AGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTTGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPCFHPR*VSCSPF
Trigger: GAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACA...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTCCTCTGCGCAGCCGATaGCAAAGCTGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPPLRSR*QSWSLP
Trigger: TGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGG...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAGGCTTGTTCACCTCTaGGCAGCCGATGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGRLVHL*AADAKA
Trigger: AGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCAGGCTTGTTCACCTCTaGGCAGCCGATGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSRLVHL*AADAKA
Trigger: AGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCT...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAGGTCTCTCTCCATCTaGTCGTGGATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGRSLSI*SWIQSR
Trigger: CCTGGACTGGATCCACGAGCAGATGGAGAGAGACCT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTAGGTCTCTCTCCATCTaGTCGTGGATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPRSLSI*SWIQSR
Trigger: CCTGGACTGGATCCACGAGCAGATGGAGAGAGACCT...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRASSKGV*SCAGSY
Trigger: GTAGGAACCTGCACACGAGCAGACACCCTTGGAGCT...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLRACYW*RNSELQ
Trigger: TTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCG...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGGGAAAGGCCGCCCTTaGAAGTTGCTGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVGKGRP*KLLLLL
Trigger: CAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSALLGW*VFSEWL
Trigger: CAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPALLGW*VFSEWL
Trigger: CAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGTCATCGGAGCACATaGTCTTCCACGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPSHRST*SSTKQL
Trigger: CAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCACTTGGGAAACCCAGTTaGGCACAGGCAACATTTGCG +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPLGKPS*AQATFA
Trigger: CGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAG...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGCAAGTGGGATGGGGCTaGATTGTCCAACAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVQVGWG*IVQQGN
Trigger: GTTTCCCTGTTGGACAATCCAGCCCCATCCCACTTG...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCTCCACCAAGTGGGATaGGGCTGGATTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSLHQVG*GWIVQQ
Trigger: CTGTTGGACAATCCAGCCCCATCCCACTTGGTGGAG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGTTCATTGAACGTGAGTaGCCCGGCCAGCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGFIERE*PGQLHK
Trigger: CTTATGAAGCTGGCCGGGCCACTCACGTTCAATGAA...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTTCATTGAACGTGAGTaGCCCGGCCAGCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCFIERE*PGQLHK
Trigger: CTTATGAAGCTGGCCGGGCCACTCACGTTCAATGAA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTTCATTGAACGTGAGTaGCCCGGCCAGCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRFIERE*PGQLHK
Trigger: CTTATGAAGCTGGCCGGGCCACTCACGTTCAATGAA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACAGCCGATGCCAAAGCTaGTCGCTCCCACTAACTTCC +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHSRCQS*SLPLTS
Trigger: GGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCT...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCTCTCCATCTGCTCGTaGATCCAGTCCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSLSICS*IQSRKE
Trigger: CTCCTTCCTGGACTGGATCCACGAGCAGATGGAGAG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTTGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARCAGIR*KGASFG
Trigger: CCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACA...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAAAATTAGTTGGGTGTaGTGGCGGGCACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPKISWV*WRAPVV
Trigger: GACCACAGGTGCCCGCCACCACACCCAACTAATTTT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHNQMDQ*ERPPLQ
Trigger: TTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTT...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCCVFSE*LLVALH
Trigger: GTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCAGTTCTGCACTTCTaGGCTGGTGCGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVAVLHF*AGASFL
Trigger: CAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGGGTGGGTTTGGTTCTaGTCCCTAGAGATGAAAACG +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRGWVWF*SLEMKT
Trigger: CGTTTTCATCTCTAGGGACCAGAACCAAACCCACCC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAAAAAGCGATCGGAATaGGAAGGGGGCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPKKRSE*EGGFNS
Trigger: GCTGTTGAAGCCCCCTTCTCATTCCGATCGCTTTTT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCTTCAATGGCAGCAGTaGCAGGATCTGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSLQWQQ*QDLCSN
Trigger: GTTGCTGCACAGATCCTGTCACTGCTGCCATTGAAG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACACATCTGTACTTCCCTaGGCAGTCGAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHTSVLP*AVEVDA
Trigger: GGCATCCACTTCGACTGCTCAGGGAAGTACAGATGT...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLSTKQL*TPGARH
Trigger: ATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGSTHDA*AVAPSM
Trigger: CATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTAAGCGGAGGCTGCAGTaGGCAGGGATTTCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPKRRLQ*AGISPL
Trigger: CAGTGGCGAAATCCCTGCTCACTGCAGCCTCCGCTT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTAGCAGGCACATCATTTaGGGTCAGGGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRASRHII*GQGFES
Trigger: GCTCTCAAACCCCTGACCTCAAATGATGTGCCTGCT...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTAACTCCTCCCGGAACTaGCCCTCCAGCGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPNSSRN*PSSELT
Trigger: AGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGTT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTAGGTCTCTCTCCATCTaGTCGTGGATCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLRSLSI*SWIQSR
Trigger: CCTGGACTGGATCCACGAGCAGATGGAGAGAGACCT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTGCCTCTTTCGGGCCTaGTACTGGTGCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGCLFRA*YWCRNS
Trigger: TGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTGCCTCTTTCGGGCCTaGTACTGGTGCCGGAACTCA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLCLFRA*YWCRNS
Trigger: TGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAAAGGCCGCCCTTaGAAGTTGCTGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHGKGRP*KLLLLL
Trigger: CAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCC...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPKTCSD*SSALLG
Trigger: GCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGAGGCCACAGTGTTACTaGCTTCCCATAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVRPQCY*LPINTA
Trigger: GGCTGTGTTTATGGGAAGCCAGTAACACTGTGGCCT...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGGGATGCCCAGACCAATaGCCAGTGCTAATATCAATG +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGGCPDQ*PVLISM
Trigger: CATTGATATTAGCACTGGCCATTGGTCTGGGCATCC...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHARGDR*TQTPPG
Trigger: TCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGC...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGARGDR*TQTPPG
Trigger: TCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGC...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAGTCACCTTGTCATCTaGCAAGAGGTGATCGATGGA +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGSHLVI*QEVIDG
Trigger: TCCATCGATCACCTCTTGCCAGATGACAAGGTGACT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGAGTCACCTTGTCATCTaGCAAGAGGTGATCGATGGA +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRSHLVI*QEVIDG
Trigger: TCCATCGATCACCTCTTGCCAGATGACAAGGTGACT...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACCAAGTGGGATGGGGCTaGATTGTCCAACAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHQVGWG*IVQQGN
Trigger: GTTTCCCTGTTGGACAATCCAGCCCCATCCCACTTG...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTCTCCACCAAGTGGGATaGGGCTGGATTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLLHQVG*GWIVQQ
Trigger: CTGTTGGACAATCCAGCCCCATCCCACTTGGTGGAG...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTATCTTCTCCACCAAGTaGGATGGGGCTGGATTGTCC +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGIFSTK*DGAGLS
Trigger: GGACAATCCAGCCCCATCCCACTTGGTGGAGAAGAT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARPYTSL*LQILLE
Trigger: TTCCAACAAGATCTGCAACCACAGGGACGTGTACGG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLFRACY*CRNSEL
Trigger: GAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCAAAATTAGTTGGGTGTaGTGGCGGGCACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSKISWV*WRAPVV
Trigger: GACCACAGGTGCCCGCCACCACACCCAACTAATTTT...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARCVFSE*LLVALH
Trigger: GTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCA...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGCAGTTCTGCACTTCTaGGCTGGTGCGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAAVLHF*AGASFL
Trigger: CAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGC...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGGGTGGGTTTGGTTCTaGTCCCTAGAGATGAAAACG +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVGWVWF*SLEMKT
Trigger: CGTTTTCATCTCTAGGGACCAGAACCAAACCCACCC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGATACACTTAAAGGATaGGCGACATCTGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCDTLKG*ATSVLP
Trigger: GGGAAGTACAGATGTCGCTCATCCTTTAAGTGTATC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCATCTGGCAAGAGGTaGTCGATGGACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSSSGKR*SMDTNS
Trigger: GGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGA...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGATGAAAACGTGCAGTaGCTGCAGTTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVDENVQ*LQFCTS
Trigger: AGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTCGTCCTCCCCGTCTTTaGAATCCGAGACTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPRPPRL*NPRLRH
Trigger: GTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACG...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTCATAAACACAGTGTaGAGCAGTGATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRVINTV*SSDDPQ
Trigger: CTGTGGATCATCACTGCTGCACACTGTGTTTATGAC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGACACGTCCCTGTGGTTaGAGATCTTGTTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRTRPCG*RSCWKS
Trigger: TGATTTCCAACAAGATCTGCAACCACAGGGACGTGT...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCCTCTGCGCAGCCGATaGCAAAGCTGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLPLRSR*QSWSLP
Trigger: TGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCAGGCTTGTTCACCTCTaGGCAGCCGATGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLRLVHL*AADAKA
Trigger: AGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCT...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTCAGGGATTTCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPQGFRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGAAATCCCTG...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGKTCSD*SSALLG
Trigger: GCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAAGGGGAGGCGTCACCTaGTCCATCCTCTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLRGGVT*SILCGP
Trigger: GGGGCCACAGAGGATGGAGCAGGTGACGCCTCCCCT...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433957.7
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAGGCCACAGTGTTACTaGCTTCCCATAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGRPQCY*LPINTA
Trigger: GGCTGTGTTTATGGGAAGCCAGTAACACTGTGGCCT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTCCTGAGCAGTCGAAGTaGATGCCCAGACCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPPEQSK*MPRPMA
Trigger: GGCCATTGGTCTGGGCATCCACTTCGACTGCTCAGG...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGGGATGGTCCATGACTTaGGGAGGTACAAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRGWSMT*GGTSHK
Trigger: TTTATGACTTGTACCTCCCCAAGTCATGGACCATCC...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTCTCCACCAAGTGGGATaGGGCTGGATTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGLHQVG*GWIVQQ
Trigger: CTGTTGGACAATCCAGCCCCATCCCACTTGGTGGAG...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTATTGCCCAGCCTCTTTaGCTTGTACTTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARIAQPL*LVLAVV
Trigger: TACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAAT...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTTTCATTGAACGTGAGTaGCCCGGCCAGCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAFIERE*PGQLHK
Trigger: CTTATGAAGCTGGCCGGGCCACTCACGTTCAATGAA...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGGCAGGCACACAGGCTaGATCATTTCATTGAACGTG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPGRHTG*IISLNV
Trigger: CACGTTCAATGAAATGATCCAGCCTGTGTGCCTGCC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGGTTGCAGATCTTGTTaGAAATCAAAGGGACGGCCG +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPGCRSC*KSKGRP
Trigger: CGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGGTTGCAGATCTTGTTaGAAATCAAAGGGACGGCCG +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAGCRSC*KSKGRP
Trigger: CGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACC...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTCCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGPYTSL*LQILLE
Trigger: TTCCAACAAGATCTGCAACCACAGGGACGTGTACGG...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCAGCCGATGCCAAAGCTaGTCGCTCCCACTAACTTCC +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLSRCQS*SLPLTS
Trigger: GGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCT...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTTTTCGGGCCTGCTACTaGTGCCGGAACTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPFRACY*CRNSEL
Trigger: GAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAA...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAACCAGATGGACCAGTaGGAAAGGCCGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGNQMDQ*ERPPLQ
Trigger: TTGCAAGGGCGGCCTTTCCCACTGGTCCATCTGGTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGCAGTTCTGCACTTCTaGGCTGGTGCGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLAVLHF*AGASFL
Trigger: CAGAAAAGACGCACCAGCCCAGAAGTGCAGAACTGC...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGTGGGTTTGGTTCTaGTCCCTAGAGATGAAAACG +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHGWVWF*SLEMKT
Trigger: CGTTTTCATCTCTAGGGACCAGAACCAAACCCACCC...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTAAAAAGCGATCGGAATaGGAAGGGGGCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLKKRSE*EGGFNS
Trigger: GCTGTTGAAGCCCCCTTCTCATTCCGATCGCTTTTT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGAGTCCAGGAAGGAGGTaGCACGGGTGTACACCCCAG +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLSPGRR*HGCTPQ
Trigger: CTGGGGTGTACACCCGTGTCACCTCCTTCCTGGACT...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCCTGGTGCGTCTTTTCTaGGTGGCTGTTGGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLLVRLF*VAVGGF
Trigger: AAAGCCACCAACAGCCACTCAGAAAAGACGCACCAG...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTTGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPCFHPR*VSCSPF
Trigger: GAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACA...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTCATAAACACAGTGTaGAGCAGTGATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARVINTV*SSDDPQ
Trigger: CTGTGGATCATCACTGCTGCACACTGTGTTTATGAC...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCGCAATTCTTTCCCTGTaGGTGTGGTACACCTACCAT +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSAILSL*VWYTYH
Trigger: ATGGTAGGTGTACCACACGCACAGGGAAAGAATTGC...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS-3UTR GCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAACACGTCCCTGTGGTTaGAGATCTTGTTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPTRPCG*RSCWKS
Trigger: TGATTTCCAACAAGATCTGCAACCACAGGGACGTGT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTACCTCTGCGCAGCCGATaGCAAAGCTGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLPLRSR*QSWSLP
Trigger: TGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGG...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCAGGGAAGCGGAGGCTaGAGTGAGCAGGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLQGSGG*SEQGFR
Trigger: GCGAAATCCCTGCTCACTGCAGCCTCCGCTTCCCTG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGATGCCCAGACCAATaGCCAGTGCTAATATCAATG +
Preference number: 4 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHGCPDQ*PVLISM
Trigger: CATTGATATTAGCACTGGCCATTGGTCTGGGCATCC...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGGATGCCCAGACCAATaGCCAGTGCTAATATCAATG +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAGCPDQ*PVLISM
Trigger: CATTGATATTAGCACTGGCCATTGGTCTGGGCATCC...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTCTTGGGAAACCCAGTTaGGCACAGGCAACATTTGCG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGLGKPS*AQATFA
Trigger: CGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAG...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCAGTCACCTTGTCATCTaGCAAGAGGTGATCGATGGA +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSSHLVI*QEVIDG
Trigger: TCCATCGATCACCTCTTGCCAGATGACAAGGTGACT...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCTCACATATACTGAGTaGTGTAATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGLTYTE*CNAVTL
Trigger: CAAGGTGACTGCATTACACCACTCAGTATATGTGAG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCCTCACATATACTGAGTaGTGTAATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCLTYTE*CNAVTL
Trigger: CAAGGTGACTGCATTACACCACTCAGTATATGTGAG...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTATTGCCCAGCCTCTTTaGCTTGTACTTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGIAQPL*LVLAVV
Trigger: TACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAAT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGCATCAGGTGCATCTTaGTCATACGGTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCASGAS*SYGKSL
Trigger: CAAAGATTTACCGTATGACCAAGATGCACCTGATGC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCAAAAAGCGATCGGAATaGGAAGGGGGCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLKKRSE*EGGFNS
Trigger: GCTGTTGAAGCCCCCTTCTCATTCCGATCGCTTTTT...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGATACACTTAAAGGATaGGCGACATCTGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRADTLKG*ATSVLP
Trigger: GGGAAGTACAGATGTCGCTCATCCTTTAAGTGTATC...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGATACACTTAAAGGATaGGCGACATCTGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGDTLKG*ATSVLP
Trigger: GGGAAGTACAGATGTCGCTCATCCTTTAAGTGTATC...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTCACTCTGAGGTTATCTaGACTCACATAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGHSEVI*THIAWE
Trigger: TTCCCAAGCTATGTGAGTTCAGATAACCTCAGAGTG...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCCACTCTGAGGTTATCTaGACTCACATAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IRWKGASFGPATGAGTQSHSEVI*THIAWE
Trigger: TTCCCAAGCTATGTGAGTTCAGATAACCTCAGAGTG...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGAGCATCTGCATCTGGTaGAACAGGACTTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRSICIW*NRTYFQ
Trigger: TTGAAAATAAGTCCTGTTGCACCAGATGCAGATGCT...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTGCAGCAACAGCATCTaGATCTGGTGCAACAGGACT +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLCSNSI*IWCNRT
Trigger: AGTCCTGTTGCACCAGATGCAGATGCTGTTGCTGCA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTCTTTGGCTTGTACTTaGTGTGGTAGACAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRSLACT*CGRQSS
Trigger: AGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCTTTGGCTTGTACTTaGTGTGGTAGACAATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCSLACT*CGRQSS
Trigger: AGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGA...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTACACGTCCCTGTGGTTaGAGATCTTGTTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPTRPCG*RSCWKS
Trigger: TGATTTCCAACAAGATCTGCAACCACAGGGACGTGT...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGKTCSD*SSALLG
Trigger: GCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGAACAGCATCTGCATCTaGTGCAACAGGACTTATTTT +
Preference number: 4 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRNSICI*CNRTYF
Trigger: AAAATAAGTCCTGTTGCACCAGATGCAGATGCTGTT...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGGATGGTCCATGACTTaGGGAGGTACAAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAGWSMT*GGTSHK
Trigger: TTTATGACTTGTACCTCCCCAAGTCATGGACCATCC...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTATTGCCCAGCCTCTTTaGCTTGTACTTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLIAQPL*LVLAVV
Trigger: TACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAAT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGGCAGGCACACAGGCTaGATCATTTCATTGAACGTG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGGRHTG*IISLNV
Trigger: CACGTTCAATGAAATGATCCAGCCTGTGTGCCTGCC...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCCCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLPYTSL*LQILLE
Trigger: TTCCAACAAGATCTGCAACCACAGGGACGTGTACGG...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTTGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPCAGIR*KGASFG
Trigger: CCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACA...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGCVFSE*LLVALH
Trigger: GTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CAA 72 bp GCACTTCTGGGCTGGTGCGTCTTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGGTCACATAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALLGWCVFSEWL*VALHVRSHNCL
Trigger: TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTAAAAAGCGATCGGAATaGGAAGGGGGCTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPKKRSE*EGGFNS
Trigger: GCTGTTGAAGCCCCCTTCTCATTCCGATCGCTTTTT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCACCTGGATGGTCCATaGCTTGGGGAGGTACAAGTC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLHLDGP*LGEVQV
Trigger: GACTTGTACCTCCCCAAGTCATGGACCATCCAGGTG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCATACGGTAAATCTTTaGAATTCGACAGTCCACACA +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARHTVNL*NSTVHT
Trigger: TGTGTGGACTGTCGAATTTCAAAGATTTACCGTATG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR TCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGCATGGAGGGGGAGATaGTGCCACCGTACACGTCCC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGAWRGR*CHRTRP
Trigger: GGGACGTGTACGGTGGCATCATCTCCCCCTCCATGC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGATGAAAACGTGCAGTaGCTGCAGTTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGDENVQ*LQFCTS
Trigger: AGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATC...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLCFHPR*VSCSPF
Trigger: GAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCATCTTTGGCTTGTACTTaGTGTGGTAGACAATCTTCT +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPSLACT*CGRQSS
Trigger: AGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGA...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTAATCTTCAAATCGATTaGTTTAGAGGGACTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARNLQID*FRGTPS
Trigger: AGAGGGAGTCCCTCTAAAGCAATCGATTTGAAGATT...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS-3UTR GCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTTCTCGTCAGGAATTTTaGAAGACCCCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLSRQEF*KTPGEK
Trigger: TTTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGA...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGGATGCCCAGACCAATaGCCAGTGCTAATATCAATG +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGGCPDQ*PVLISM
Trigger: CATTGATATTAGCACTGGCCATTGGTCTGGGCATCC...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTCTCACATATACTGAGTaGTGTAATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGLTYTE*CNAVTL
Trigger: CAAGGTGACTGCATTACACCACTCAGTATATGTGAG...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCTCTCCATCTGCTCGTaGATCCAGTCCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLLSICS*IQSRKE
Trigger: CTCCTTCCTGGACTGGATCCACGAGCAGATGGAGAG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTCACTCTGAGGTTATCTaGACTCACATAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGHSEVI*THIAWE
Trigger: TTCCCAAGCTATGTGAGTTCAGATAACCTCAGAGTG...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGAATGCATTTTCGTCTaGGCTACAGCAGATAACAGA +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLECIFV*ATADNR
Trigger: TCTGTTATCTGCTGTAGCTCAGACGAAAATGCATTC...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR GCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGCGGGCCTGCTACTGGTaGCGGAACTCAGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGRACYW*RNSELQ
Trigger: TTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCG...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTCTCGTCAGGAATTTTaGAAGACCCCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGSRQEF*KTPGEK
Trigger: TTTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTCTCGTCAGGAATTTTaGAAGACCCCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLSRQEF*KTPGEK
Trigger: TTTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCGGATGGTCCATGACTTaGGGAGGTACAAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLGWSMT*GGTSHK
Trigger: TTTATGACTTGTACCTCCCCAAGTCATGGACCATCC...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGATCTTCTCCACCAAGTaGGATGGGGCTGGATTGTCC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLIFSTK*DGAGLS
Trigger: GGACAATCCAGCCCCATCCCACTTGGTGGAGAAGAT...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGCATCAGGTGCATCTTaGTCATACGGTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLASGAS*SYGKSL
Trigger: CAAAGATTTACCGTATGACCAAGATGCACCTGATGC...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR TCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGSTKQL*TPGARH
Trigger: ATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGA...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTCATCTGGCAAGAGGTaGTCGATGGACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLSSGKR*SMDTNS
Trigger: GGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGGGAAAGGCCGCCCTTaGAAGTTGCTGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLGKGRP*KLLLLL
Trigger: CAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAACGTCAAGCACCAAATaGTACAAAGAAATCATGAAA +
Preference number: 4 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPTSSTK*YKEIMK
Trigger: TTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTACGTCAAGCACCAAATaGTACAAAGAAATCATGAAA +
Preference number: 4 (lower is better)
Translates to: LSGLLLVPELRAPRVSARTSSTK*YKEIMK
Trigger: TTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTAACAGCATCTGCATCTaGTGCAACAGGACTTATTTT +
Preference number: 4 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLNSICI*CNRTYF
Trigger: AAAATAAGTCCTGTTGCACCAGATGCAGATGCTGTT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGCCTGAGCAGTCGAAGTaGATGCCCAGACCAATGGCC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGPEQSK*MPRPMA
Trigger: GGCCATTGGTCTGGGCATCCACTTCGACTGCTCAGG...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGTGCAAGGTAACCACGTaGCCAGAGGCACATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGCKVTT*PEAHPS
Trigger: GGAGGGATGTGCCTCTGGCCACGTGGTTACCTTGCA...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGAAACTAGACCCACCTaGATGGTCCATGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLETRPT*MVHDLG
Trigger: CCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVKGTAA*FRTGEA
Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATGTGCTGGAATCAGATaGAAGGGTGCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLCAGIR*KGASFG
Trigger: CCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACA...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTGCGTCTTTTCTGAGTaGCTGTTGGTGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLCVFSE*LLVALH
Trigger: GTGCAAAGCCACCAACAGCCACTCAGAAAAGACGCA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
3UTR CAA 72 bp AGTGGGAAAGGCCGCCCTTGCAAGTTGCTGCTTCTTTaGTTCTTAGTGAAGATCAGAAAGGAGCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGKGRPCKLLLL*FLVKIRKEREA
Trigger: AGCCTCACGCTCCTTTCTGATCTTCACTAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCCTTTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCTGGAGCACGGCATTCTaGCCACCCACCCGGACACAG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVWSTAF*PPTRTQ
Trigger: CTGTGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCA...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCCATACGGTAAATCTTTaGAATTCGACAGTCCACACA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLHTVNL*NSTVHT
Trigger: TGTGTGGACTGTCGAATTTCAAAGATTTACCGTATG...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR GCA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCAGCATCTGCATCTGGTaGAACAGGACTTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLSICIW*NRTYFQ
Trigger: TTGAAAATAAGTCCTGTTGCACCAGATGCAGATGCT...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAGCATCTGCATCTGGTaGAACAGGACTTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGSICIW*NRTYFQ
Trigger: TTGAAAATAAGTCCTGTTGCACCAGATGCAGATGCT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGAGCTCCAAGGGTGTCTaGTCGTGTGCAGGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGSSKGV*SCAGSY
Trigger: GTAGGAACCTGCACACGAGCAGACACCCTTGGAGCT...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGCACTTCTGGGCTGGTaGGTCTTTTCTGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGALLGW*VFSEWL
Trigger: CAGCCACTCAGAAAAGACGCACCAGCCCAGAAGTGC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAAGGCCACAGTGTTACTaGCTTCCCATAAACACAGCC +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLRPQCY*LPINTA
Trigger: GGCTGTGTTTATGGGAAGCCAGTAACACTGTGGCCT...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTAACAGCATCTGCATCTaGTGCAACAGGACTTATTTT +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGNSICI*CNRTYF
Trigger: AAAATAAGTCCTGTTGCACCAGATGCAGATGCTGTT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGCTAGACCCACCTGGATaGTCCATGACTTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGLDPPG*SMTWGG
Trigger: ACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAG...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTACCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLPYTSL*LQILLE
Trigger: TTCCAACAAGATCTGCAACCACAGGGACGTGTACGG...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCACTCTGAGGTTATCTaGACTCACATAGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLHSEVI*THIAWE
Trigger: TTCCCAAGCTATGTGAGTTCAGATAACCTCAGAGTG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGGCACAGGCAACATTTaGGTAGTGACCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGGTGNI*VVTLPV
Trigger: GACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGCAAGTGGGATGGGGCTaGATTGTCCAACAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGQVGWG*IVQQGN
Trigger: GTTTCCCTGTTGGACAATCCAGCCCCATCCCACTTG...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGTCATAAACACAGTGTaGAGCAGTGATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLVINTV*SSDDPQ
Trigger: CTGTGGATCATCACTGCTGCACACTGTGTTTATGAC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAACACGTCCCTGTGGTTaGAGATCTTGTTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLTRPCG*RSCWKS
Trigger: TGATTTCCAACAAGATCTGCAACCACAGGGACGTGT...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATCTCGTCAGGAATTTTaGAAGACCCCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLSRQEF*KTPGEK
Trigger: TTTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGA...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTACGTCAAGCACCAAATaGTACAAAGAAATCATGAAA +
Preference number: 4 (lower is better)
Translates to: EGCAGIRWKGASFGPATGTSSTK*YKEIMK
Trigger: TTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGGATGGTCCATGACTTaGGGAGGTACAAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLGWSMT*GGTSHK
Trigger: TTTATGACTTGTACCTCCCCAAGTCATGGACCATCC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTGCAGCAACAGCATCTaGTGCAACAGGACTTATTTT +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLCSNSI*CNRTYF
Trigger: AAAATAAGTCCTGTTGCACCAGATGCTGTTGCTGCA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGGTTGCAGATCTTGTTaGAAATCAAAGGGACGGCCG +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGGCRSC*KSKGRP
Trigger: CGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGAATGCATTTTCGTCTaGGCTACAGCAGATAACAGA +
Preference number: 4 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLECIFV*ATADNR
Trigger: TCTGTTATCTGCTGTAGCTCAGACGAAAATGCATTC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAGCAGTCGAAGTGGATaGCCAGACCAATGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVSSRSG*PDQWPV
Trigger: CACTGGCCATTGGTCTGGGCATCCACTTCGACTGCT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTCTTTGGCTTGTACTTaGTGTGGTAGACAATCTTCT +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLSLACT*CGRQSS
Trigger: AGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGGTGAGGTCACATAACTaGTTATCTCGTCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLVRSHN*LSRQEF
Trigger: AAATTCCTGACGAGATAAGCAGTTATGTGACCTCAC...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTACGTCAAGCACCAAATaGTACAAAGAAATCATGAAA +
Preference number: 4 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPTSSTK*YKEIMK
Trigger: TTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCCTAGACCCACCTGGATaGTCCATGACTTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVLDPPG*SMTWGG
Trigger: ACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAG...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGATTGCCCAGCCTCTTTaGCTTGTACTTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGIAQPL*LVLAVV
Trigger: TACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAAT...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGGATACACTTAAAGGATaGGCGACATCTGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGDTLKG*ATSVLP
Trigger: GGGAAGTACAGATGTCGCTCATCCTTTAAGTGTATC...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR GCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGGCACAGGCAACATTTaGGTAGTGACCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVGTGNI*VVTLPV
Trigger: GACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAACCTGAGCAGTCGAAGTaGATGCCCAGACCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKPEQSK*MPRPMA
Trigger: GGCCATTGGTCTGGGCATCCACTTCGACTGCTCAGG...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVARGDR*TQTPPG
Trigger: TCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATGCAAGGTAACCACGTaGCCAGAGGCACATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKCKVTT*PEAHPS
Trigger: GGAGGGATGTGCCTCTGGCCACGTGGTTACCTTGCA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGAAACTAGACCCACCTaGATGGTCCATGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVETRPT*MVHDLG
Trigger: CCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCTCATCTGGCAAGAGGTaGTCGATGGACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVSSGKR*SMDTNS
Trigger: GGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGA...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAACACCTGGATGGTCCATaGCTTGGGGAGGTACAAGTC +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKHLDGP*LGEVQV
Trigger: GACTTGTACCTCCCCAAGTCATGGACCATCCAGGTG...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR GCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAAGCAGTCGAAGTGGATaGCCAGACCAATGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKSSRSG*PDQWPV
Trigger: CACTGGCCATTGGTCTGGGCATCCACTTCGACTGCT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGTCCCAAAAATGTAGATaGCACCACGGAAGAGATAGT +
Preference number: 4 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGSQKCR*HHGRDS
Trigger: ACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGA...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCGGTTGCAGATCTTGTTaGAAATCAAAGGGACGGCCG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVGCRSC*KSKGRP
Trigger: CGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACC...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR TCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAACATCTGTACTTCCCTaGGCAGTCGAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKTSVLP*AVEVDA
Trigger: GGCATCCACTTCGACTGCTCAGGGAAGTACAGATGT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCCTTTCCCTGTGCGTGTaGTACACCTACCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVLSLCV*YTYHKH
Trigger: ATGCTTATGGTAGGTGTACCACACGCACAGGGAAAG...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS-3UTR GCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAAAAACGTGCAGTGACTaGAGTTCTGCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKKTCSD*SSALLG
Trigger: GCCCAGAAGTGCAGAACTGCAGTCACTGCACGTTTT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGGCAGGCACACAGGCTaGATCATTTCATTGAACGTG +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKGRHTG*IISLNV
Trigger: CACGTTCAATGAAATGATCCAGCCTGTGTGCCTGCC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGGGTGGGTTTGGTTCTaGTCCCTAGAGATGAAAACG +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKGWVWF*SLEMKT
Trigger: CGTTTTCATCTCTAGGGACCAGAACCAAACCCACCC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR TCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGATGAAAACGTGCAGTaGCTGCAGTTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKDENVQ*LQFCTS
Trigger: AGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAAGTCACCTTGTCATCTaGCAAGAGGTGATCGATGGA +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKSHLVI*QEVIDG
Trigger: TCCATCGATCACCTCTTGCCAGATGACAAGGTGACT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CCA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCCTCACATATACTGAGTaGTGTAATGCAGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVLTYTE*CNAVTL
Trigger: CAAGGTGACTGCATTACACCACTCAGTATATGTGAG...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATCCCAAAAATGTAGATaGCACCACGGAAGAGATAGT +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKSQKCR*HHGRDS
Trigger: ACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433957.7
ENST00000644384.2
CDS-3UTR GCA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAAGCAACAGCATCTGGTaGAACAGGACTTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: GKETYYLESKDNNTSSTKSNSIW*NRTYFQ
Trigger: TTGAAAATAAGTCCTGTTGCACCAGATGCTGTTGCT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS GCA 90 bp GGGATGTCAGGAGCAGGCAGGAACCTTCTGCAGCCCCCTCCTCACTaGCGCTGGTGCACGCACCTCCCTGACTGCTCCAGACCCCACCCT +
Preference number: 5 (lower is better)
Translates to: GMSGAGRNLLQPPPH*RWCTHLPDCSRPHP
Trigger: AGGGTGGGGTCTGGAGCAGTCAGGGAGGTGCGTGCACCAGCGGCAGTGAGGAGGGGGCTGCAGAAGGTTCCTGCCTGCTCCTGACATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGTGTACACCCCAGGCTaGTTCACCTCTGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCVYTPG*FTSAQP
Trigger: CGGCTGCGCAGAGGTGAACAAGCCTGGGGTGTACAC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGTGTACACCCCAGGCTaGTTCACCTCTGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVVYTPG*FTSAQP
Trigger: CGGCTGCGCAGAGGTGAACAAGCCTGGGGTGTACAC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp GGATGGTGGGTGCTGTGGAGGATGCGGTGGGAAAAGCACCTGCCCTaGTTGGTCAGTGCCCAGCATTGGCAGCACCACTCCCCATCCTAT +
Preference number: 5 (lower is better)
Translates to: GWWVLWRMRWEKHLP*LVSAQHWQHHSPSY
Trigger: ATAGGATGGGGAGTGGTGCTGCCAATGCTGGGCACTGACCAAGCAGGGCAGGTGCTTTTCCCACCGCATCCTCCACAGCACCCACCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 90 bp GTCAGGCTCTTGGGGAGACCTGAGGATGGTGGGTGCTGTGGAGGATaGGGTGGGAAAAGCACCTGCCCTGCTTGGTCAGTGCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: VRLLGRPEDGGCCGG*GGKSTCPAWSVPSI
Trigger: AATGCTGGGCACTGACCAAGCAGGGCAGGTGCTTTTCCCACCGCATCCTCCACAGCACCCACCATCCTCAGGTCTCCCCAAGAGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTCGTCCTCCCCGTCTTaGCAATCCGAGACTCCGTCA +
Preference number: 5 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRSSSPS*QSETPS
Trigger: TGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCGGCTGGATCATTTCATaGAACGTGAGTGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCGWIIS*NVSGPA
Trigger: GGCCGGGCCACTCACGTTCAATGAAATGATCCAGCC...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS TCA 90 bp GACCCTTCCAGTCATCGGAGCACATGGTCTTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCATTCTGACCACCCACCCGGACACAGC +
Preference number: 5 (lower is better)
Translates to: DPSSHRSTWSSTKQL*TPGARHSDHPPGHS
Trigger: GCTGTGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACTGGAAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp CCTGCCAGGGCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTCTATGACCACAGGCTGTGCACTGCA +
Preference number: 5 (lower is better)
Translates to: PARATARARTCFHPR*VSCSPFYDHRLCTA
Trigger: TGCAGTGCACAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGCCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp CCTGCCAGGGCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTCTATGACCACAGGCTATGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PARATARARTCFHPR*VSCSPFYDHRLWRG
Trigger: TCCCCTCCATAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGCCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTTGAGGTCAGGGGTTaGAGAGCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRFEVRG*RAAWPT
Trigger: TGTTGGCCAGGCTGCTCTCAAACCCCTGACCTCAAA...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS TCA 90 bp CCAGGGCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATGACCACAGGCTGTGCACTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: PGPLREQGHVSTHDA*AVAPSMTTGCALQG
Trigger: ACCTTGCAGTGCACAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp GCGCAGAGCATGGAGGGGGAGATGATGCCACCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAAATCAAAGGGACGGCCGCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: AQSMEGEMMPPYTSL*LQILLEIKGTAAWF
Trigger: GAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTCCATGCTCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACTCGTCCTCCCCGTCTTaGCAATCCGAGACTCCGTCA +
Preference number: 5 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHSSSPS*QSETPS
Trigger: TGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGA...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGTGGGATGGGGCTGGATaGTCCAACAGGGAAACTAGA +
Preference number: 5 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGWDGAG*SNRETR
Trigger: TCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCCA...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCATTGCCCAGCCTCTTaGGCTTGTACTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGHCPAS*ACTCCG
Trigger: ACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGCATTGCCCAGCCTCTTaGGCTTGTACTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: ACYWCRNSELQGCLLVCRHCPAS*ACTCCG
Trigger: ACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATG...CCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTGGATCATTTCATaGAACGTGAGTGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGGWIIS*NVSGPA
Trigger: GGCCGGGCCACTCACGTTCAATGAAATGATCCAGCC...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCGTGTACACCCCAGGCTaGTTCACCTCTGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLVYTPG*FTSAQP
Trigger: CGGCTGCGCAGAGGTGAACAAGCCTGGGGTGTACAC...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAACTCAGGTGGCTACTaGTCCCCTTCCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCNSGGY*SPSSSG
Trigger: ACCTGAAGAGGAAGGGGACAAGTAGCCACCTGAGTT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTTTTGAGGTCAGGGGTTaGAGAGCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LSGLLLVPELRAPRVSARFEVRG*RAAWPT
Trigger: TGTTGGCCAGGCTGCTCTCAAACCCCTGACCTCAAA...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGTTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRFSEWL*VALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAA...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS TCA 90 bp CCAGGGCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATGACCACAGGCTATGGAGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: PGPLREQGHVSTHDA*AVAPSMTTGYGGEQ
Trigger: TTGTTCCCCTCCATAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 90 bp TCTGACCACCCACCCGGACACAGCGGTACTCGTCCTCCCCGTCTTTaGAATCCGAGACTCCGTCACATCGAGCTATCAGCTCGATACACT +
Preference number: 5 (lower is better)
Translates to: SDHPPGHSGTRPPRL*NPRLRHIELSARYT
Trigger: AGTGTATCGAGCTGATAGCTCGATGTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGAGTACCGCTGTGTCCGGGTGGGTGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp TGTACACCCCAGGCTTGTTCACCTCTGCGCAGCCGATGCCAAAGCTaGTCGCTCCCACTAACTTCCACAGCCTCCTCTCTTGACACACCA +
Preference number: 5 (lower is better)
Translates to: CTPQACSPLRSRCQS*SLPLTSTASSLDTP
Trigger: TGGTGTGTCAAGAGAGGAGGCTGTGGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCTGGGGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCGCTTGGGAAACCCAGTaGGGCACAGGCAACATTTGC +
Preference number: 5 (lower is better)
Translates to: IRWKGASFGPATGAGTQSAWETQ*GTGNIC
Trigger: GCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGC...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTATAAGGGCGATGTCATaGCCCAGCCTCTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: LSGLLLVPELRAPRVSARIRAMS*PSLFGL
Trigger: CAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTAT...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAACTCAGGTGGCTACTaGTCCCCTTCCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPNSGGY*SPSSSG
Trigger: ACCTGAAGAGGAAGGGGACAAGTAGCCACCTGAGTT...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCATTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: DGRVPLSGLLLVPELRAPFSEWL*VALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAA...TGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTAGAAAGGGTGGGTTaGGTTCTGGTCCCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: GRVPLSGLLLVPELRAPRVERVG*VLVPRD
Trigger: ATCTCTAGGGACCAGAACCAAACCCACCCTTTCTAC...CCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp ATGACCACAGGCTATGGAGGGGAACAAAGGCTTGTGGGTCCACCCTaGAGACTTCTTTGGGGGACATGGTGTCACCACCATGCACCTGCT +
Preference number: 5 (lower is better)
Translates to: MTTGYGGEQRLVGPP*RLLWGTWCHHHAPA
Trigger: AGCAGGTGCATGGTGGTGACACCATGTCCCCCAAAGAAGTCTGCAGGGTGGACCCACAAGCCTTTGTTCCCCTCCATAGCCTGTGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTCGTCCTCCCCGTCTTaGCAATCCGAGACTCCGTCA +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLSSSPS*QSETPS
Trigger: TGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTCTGAACTCACATAGCTaGGGAAACCCAGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGLNSHS*GNPVGH
Trigger: GTGCCCAACTGGGTTTCCCAAGCTATGTGAGTTCAG...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACTGGGATGGGGCTGGATaGTCCAACAGGGAAACTAGA +
Preference number: 5 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHWDGAG*SNRETR
Trigger: TCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCCA...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTTGGGATGGGGCTGGATaGTCCAACAGGGAAACTAGA +
Preference number: 5 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPWDGAG*SNRETR
Trigger: TCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCCA...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTGGGATGGGGCTGGATaGTCCAACAGGGAAACTAGA +
Preference number: 5 (lower is better)
Translates to: IRWKGASFGPATGAGTQSWDGAG*SNRETR
Trigger: TCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCCA...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCATTGCCCAGCCTCTTaGGCTTGTACTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAHCPAS*ACTCCG
Trigger: ACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATG...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTATAAGGGCGATGTCATaGCCCAGCCTCTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGIRAMS*PSLFGL
Trigger: CAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTAT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGTGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVWLQIL*EIKGTA
Trigger: GGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCA...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGCTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGLWLQI*LEIKGT
Trigger: CGTCCCTTTGATTTCCAACAAGATCTGCAACCACAG...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGGCCGCCCTTGCAAGTaGCTGCTTCTTTTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: HGSPGEDRAVFITSGTQVGRPCK*LLLLFL
Trigger: TAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCC...CACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp AGTGGTGTAATGCAGTCACCTTGTCATCTGGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGAACTGCCCCTCCAGCGAGCTCACTC +
Preference number: 5 (lower is better)
Translates to: SGVMQSPCHLARGDR*TQTPPGTAPPASSL
Trigger: GAGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGACAAGGTGACTGCATTACACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCGGGCACAGGCAACATTaGCGTAGTGACCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLGHRQH*RSDPSS
Trigger: ACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCCC...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCGCTTGGGAAACCCAGTaGGGCACAGGCAACATTTGC +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLAWETQ*GTGNIC
Trigger: GCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGC...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCTTGGGAAACCCAGTaGGGCACAGGCAACATTTGC +
Preference number: 5 (lower is better)
Translates to: EGCAGIRWKGASFGPATGAWETQ*GTGNIC
Trigger: GCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGC...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTCATTGCCCAGCCTCTTaGGCTTGTACTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLHCPAS*ACTCCG
Trigger: ACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATG...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTATAAGGGCGATGTCATaGCCCAGCCTCTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLIRAMS*PSLFGL
Trigger: CAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTAT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGGCTGGATCATTTCATaGAACGTGAGTGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPGWIIS*NVSGPA
Trigger: GGCCGGGCCACTCACGTTCAATGAAATGATCCAGCC...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTCTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: LSGLLLVPELRAPRVSARLWLQI*LEIKGT
Trigger: CGTCCCTTTGATTTCCAACAAGATCTGCAACCACAG...ACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTTTGAGGTCAGGGGTTaGAGAGCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: EGCAGIRWKGASFGPATGFEVRG*RAAWPT
Trigger: TGTTGGCCAGGCTGCTCTCAAACCCCTGACCTCAAA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGGCCGCCCTTGCAAGTaGCTGCTTCTTTTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPGRPCK*LLLLFL
Trigger: TAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGTGCAGGTTCCTACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTGTAGAAAGGGTGGGTTaGGTTCTGGTCCCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: CAGSYTGVQGRIGLSSSPVERVG*VLVPRD
Trigger: ATCTCTAGGGACCAGAACCAAACCCACCCTTTCTAC...AGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGTAGGAACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGTAGAAAGGGTGGGTTaGGTTCTGGTCCCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHVERVG*VLVPRD
Trigger: ATCTCTAGGGACCAGAACCAAACCCACCCTTTCTAC...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp AAGTGGGATGGGGCTGGATTGTCCAACAGGGAAACTAGACCCACCTaGATGGTCCATGACTTGGGGAGGTACAAGCCTGTCTCTGCCATA +
Preference number: 5 (lower is better)
Translates to: KWDGAGLSNRETRPT*MVHDLGRYKPVSAI
Trigger: TATGGCAGAGACAGGCTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478680.1
CDS CCA 90 bp GGGTCCACAGTGAGGCTGGAGACTCCTCTCCAACTGTACATTACTTaGAGGTTAGTCTCTCTGTCTTCCCTCTGGACCCGCTTCTCACCA +
Preference number: 5 (lower is better)
Translates to: GSTVRLETPLQLYIT*RLVSLSSLWTRFSP
Trigger: TGGTGAGAAGCGGGTCCAGAGGGAAGACAGAGAGACTAACCTCCAAGTAATGTACAGTTGGAGAGGAGTCTCCAGCCTCACTGTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGGGCACAGGCAACATTaGCGTAGTGACCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPGHRQH*RSDPSS
Trigger: ACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCCC...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTCTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGLWLQI*LEIKGT
Trigger: CGTCCCTTTGATTTCCAACAAGATCTGCAACCACAG...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACTACACGTCCCTGTGGTaGCAGATCTTGTTGGAAATC +
Preference number: 5 (lower is better)
Translates to: WCRNSELQGCLLVCRFLHYTSLW*QILLEI
Trigger: GATTTCCAACAAGATCTGCAACCACAGGGACGTGTA...GTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTGAGTTCCGGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGGCCGCCCTTGCAAGTaGCTGCTTCTTTTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLGRPCK*LLLLFL
Trigger: TAAGAACAAAAGAAGCAGCAACTTGCAAGGGCGGCC...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTATCTCGTCAGGAATTTaGCAAGACCCCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGISSGI*QDPWRE
Trigger: TTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGAT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTTTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: EGCAGIRWKGASFGPATGFSEWL*VALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAA...ACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS TCA 90 bp TATACTGAGTGGTGTAATGCAGTCACCTTGTCATCTGGCAAGAGGTaGTCGATGGACACAAACTCCTCCCGGAACTGCCCCTCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: YTEWCNAVTLSSGKR*SMDTNSSRNCPSSE
Trigger: CTCGCTGGAGGGGCAGTTCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGACAAGGTGACTGCATTACACCACTCAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp GGGATGGGGCTGGATTGTCCAACAGGGAAACTAGACCCACCTGGATaGTCCATGACTTGGGGAGGTACAAGTCATAAACACAGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GMGLDCPTGKLDPPG*SMTWGGTSHKHSVQ
Trigger: CTGCACACTGTGTTTATGACTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAGCCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTAACTCAGGTGGCTACTaGTCCCCTTCCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPNSGGY*SPSSSG
Trigger: ACCTGAAGAGGAAGGGGACAAGTAGCCACCTGAGTT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCCAAGGGTGTCTGCAAAACAAAAAGCAGCTaGAAGGTTGTGCTGGAATCA +
Preference number: 5 (lower is better)
Translates to: ASFGPATGAGTQSSKGVCKTKSS*KVVLES
Trigger: TGATTCCAGCACAACCTTCAAGCTGCTTTTTGTTTT...GCAGACACCCTTGGAGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp CAGAGCTCCAAGGGTGTCTGCTCGTGTGCAGGTTCCTACACGGGAGTCCAGGGGAAAACAAAAAGCAGCTaGAAGGTTGTGCTGGAATCA +
Preference number: 5 (lower is better)
Translates to: QSSKGVCSCAGSYTGVQGKTKSS*KVVLES
Trigger: TGATTCCAGCACAACCTTCAAGCTGCTTTTTGTTTT...CCCCTGGACTCCCGTGTAGGAACCTGCACACGAGCAGACACCCTTGGAGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTATCTCGTCAGGAATTTaGCAAGACCCCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VQGRIGLSSSPQELRWLLISSGI*QDPWRE
Trigger: TTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGAT...AAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS TCA 90 bp GACCTCACTCTCAGCACCTCTGAGGTCGTCTTGGCATTTGAGGGCTaGACTCAACATTGGTCACTGCAAGGAGTCTATCAGGCACTACTG +
Preference number: 5 (lower is better)
Translates to: DLTLSTSEVVLAFEG*TQHWSLQGVYQALL
Trigger: CAGTAGTGCCTGATAGACTCCTTGCAGTGACCAATGTTGAGTTCAGCCCTCAAATGCCAAGACGACCTCAGAGGTGCTGAGAGTGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 90 bp CGCCTCCACCTCTACCTCATAATTCCCGAGTCCCAAAAATGTAGATaGCACCACGGAAGAGATAGTAGGCCACAGTGTTACTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLHLYLIIPESQKCR*HHGRDSRPQCYWLP
Trigger: GGGAAGCCAGTAACACTGTGGCCTACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGACTCGGGAATTATGAGGTAGAGGTGGAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398397.3
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGGCTTGGGAAACCCAGTaGGGCACAGGCAACATTTGC +
Preference number: 5 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLAWETQ*GTGNIC
Trigger: GCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGC...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCTACACGTCCCTGTGGTaGCAGATCTTGTTGGAAATC +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLYTSLW*QILLEI
Trigger: GATTTCCAACAAGATCTGCAACCACAGGGACGTGTA...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp AAGATGGTGGGAGAGGTTATCAGGCAAGATGTGGTCCCATCACCCTaGTTGTTTATGCTGTATATGCAACTGCACTGCCACGCCCTACAG +
Preference number: 5 (lower is better)
Translates to: KMVGEVIRQDVVPSP*LFMLYMQLHCHALQ
Trigger: CTGTAGGGCGTGGCAGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTCCCACCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGCTGAACTCACATAGCTaGGGAAACCCAGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLLNSHS*GNPVGH
Trigger: GTGCCCAACTGGGTTTCCCAAGCTATGTGAGTTCAG...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp ATCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTCATACGGTAAATCTTaGAAATTCGACAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: IRWKGASFGPATGAGTQSSYGKS*KFDSPH
Trigger: GTGTGGACTGTCGAATTTCAAAGATTTACCGTATGA...GCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR CAA 90 bp ACACGGGAGTCCAGGGGAGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTAAAACAAAAAGCAGCTaGAAGGTTGTGCTGGAATCA +
Preference number: 5 (lower is better)
Translates to: TRESRGGSGCLHHLRNSGKTKSS*KVVLES
Trigger: TGATTCCAGCACAACCTTCAAGCTGCTTTTTGTTTT...ACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCTCCCCTGGACTCCCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TCAGATGGAAGGGTGCCTCTTTCGGGCCTGCTACTGGTGCCGGAACTCAGAGCTAAAACAAAAAGCAGCTaGAAGGTTGTGCTGGAATCA +
Preference number: 5 (lower is better)
Translates to: SDGRVPLSGLLLVPELRAKTKSS*KVVLES
Trigger: TGATTCCAGCACAACCTTCAAGCTGCTTTTTGTTTT...AGCTCTGAGTTCCGGCACCAGTAGCAGGCCCGAAAGAGGCACCCTTCCATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp AAGCAGCTTGAAGGTTGTGCTGGAATCAGATGGAAGGGTGCCTCTTTCGGGCCTATCTCGTCAGGAATTTaGCAAGACCCCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: KQLEGCAGIRWKGASFGPISSGI*QDPWRE
Trigger: TTCTCTCCAGGGGTCTTGCAAAATTCCTGACGAGAT...AGGCCCGAAAGAGGCACCCTTCCATCTGATTCCAGCACAACCTTCAAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTTTTCTGAGTGGCTGTaGGTGGCTTTGCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLFSEWL*VALHVR
Trigger: CCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp GAGAGGTTATCAGGCAAGATGTGGTCCCATCACCCTGCTTGTTTATaGTGTATATGCAACTGCACTGCCACGCCCTACAGAAACACAGAC +
Preference number: 5 (lower is better)
Translates to: ERLSGKMWSHHPACL*CICNCTATPYRNTD
Trigger: GTCTGTGTTTCTGTAGGGCGTGGCAGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 90 bp ACCACTGAACTCATTGACCTCAGGTATCCTGAAAACCTAGGAAGATaGTGGGAGAGGTTATCAGGCAAGATGTGGTCCCATCACCCTGCT +
Preference number: 5 (lower is better)
Translates to: TTELIDLRYPENLGR*WERLSGKMWSHHPA
Trigger: AGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTCCCACCATCTTCCTAGGTTTTCAGGATACCTGAGGTCAATGAGTTCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLWLQIL*EIKGTA
Trigger: GGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp ACTGAACTCATTGACCTCAGGTATCCTGAAAACCTAGGAAGATGGTaGGAGAGGTTATCAGGCAAGATGTGGTCCCATCACCCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: TELIDLRYPENLGRW*ERLSGKMWSHHPAC
Trigger: ACAAGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTCCCACCATCTTCCTAGGTTTTCAGGATACCTGAGGTCAATGAGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp ATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTGGCTACTTGTCCCCTTCCTCACAATGACTTTCCCATaGTTTGTCCAACCAATCTTC +
Preference number: 5 (lower is better)
Translates to: IGLSSSPQELRWLLVPFLTMTFP*FVQPIF
Trigger: GAAGATTGGTTGGACAAACAATGGGAAAGTCATTGT...GAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398405.5
CDS-3UTR CAA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTATGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLWLQIL*EIKGTA
Trigger: GGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCA...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTAGTAGAAAGGGTGGGTTaGGTTCTGGTCCCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLVERVG*VLVPRD
Trigger: ATCTCTAGGGACCAGAACCAAACCCACCCTTTCTAC...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS CCA 90 bp CCTGAAAACCTAGGAAGATGGTGGGAGAGGTTATCAGGCAAGATGTaGTCCCATCACCCTGCTTGTTTATGCTGTATATGCAACTGCACT +
Preference number: 5 (lower is better)
Translates to: PENLGRWWERLSGKM*SHHPACLCCICNCT
Trigger: AGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTCCCACCATCTTCCTAGGTTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS-3UTR CAA 90 bp CCTAGATTAACCTCCCCACATGTGAAAATAAGTCTTGGAAGTAGAAAGGGTGGGCTGAACTCACATAGCTaGGGAAACCCAGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: PRLTSPHVKISLGSRKGGLNSHS*GNPVGH
Trigger: GTGCCCAACTGGGTTTCCCAAGCTATGTGAGTTCAG...CCCACCCTTTCTACTTCCAAGACTTATTTTCACATGTGGGGAGGTTAATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GTCTTTTCTGAGTGGCTGTTGGTGGCTTTGCACGTGAGGTCACATAACTGCTTACTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: VFSEWLLVALHVRSHNCLLWLQI*LEIKGT
Trigger: CGTCCCTTTGATTTCCAACAAGATCTGCAACCACAG...TAAGCAGTTATGTGACCTCACGTGCAAAGCCACCAACAGCCACTCAGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS GCA 90 bp CTGAGGTCGTCTTGGCATTTGAGGGCTGAACTCAACATTGGTCACTaGAAGGAGTCTATCAGGCACTACTGTTCATCAAACAGCAACAAA +
Preference number: 5 (lower is better)
Translates to: LRSSWHLRAELNIGH*KESIRHYCSSNSNK
Trigger: TTTGTTGCTGTTTGATGAACAGTAGTGCCTGATAGACTCCTTGCAGTGACCAATGTTGAGTTCAGCCCTCAAATGCCAAGACGACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 90 bp CCCCCAGAAAGACACGTTGAGGTCTTAACTCTTAGTACCTCAGAATaGCATCTTATTTGGAGATGGCCTGGAGAGTCTTTACAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: PPERHVEVLTLSTSE*HLIWRWPGESLQSH
Trigger: ATGACTCTGTAAAGACTCTCCAGGCCATCTCCAAATAAGATGCCATTCTGAGGTACTAAGAGTTAAGACCTCAACGTGTCTTTCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482761.1
CDS CCA 90 bp CAGATAACAGAAAAGCTTATAATTCCCGAGTCCCAAAAATGTAGATaGCACCACGGAAGAGATAGTAGGCCACAGTGTTACTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QITEKLIIPESQKCR*HHGRDSRPQCYWLP
Trigger: GGGAAGCCAGTAACACTGTGGCCTACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGACTCGGGAATTATAAGCTTTTCTGTTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652415.1
CDS-3UTR CAA 90 bp TGGTTCTGGTCCCTAGAGATGAAAACGTGCAGTGACTGCAGTTCTGCACTTCTGTCATACGGTAAATCTTaGAAATTCGACAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: WFWSLEMKTCSDCSSALLSYGKS*KFDSPH
Trigger: GTGTGGACTGTCGAATTTCAAAGATTTACCGTATGA...CAGAAGTGCAGAACTGCAGTCACTGCACGTTTTCATCTCTAGGGACCAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAGGCTGGATCATTTCATaGAACGTGAGTGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GKETYYLESKDNNTSSTKGWIIS*NVSGPA
Trigger: GGCCGGGCCACTCACGTTCAATGAAATGATCCAGCC...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CAA 90 bp ACGTCAAGCACCAAATGCTACAAAGAAATCATGAAAATAGGCCTTAAACGAGTCAACTCAGGTGGCTACTaGTCCCCTTCCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: TSSTKCYKEIMKIGLKRVNSGGY*SPSSSG
Trigger: ACCTGAAGAGGAAGGGGACAAGTAGCCACCTGAGTT...GACTCGTTTAAGGCCTATTTTCATGATTTCTTTGTAGCATTTGGTGCTTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
ENST00000652415.1
CDS-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAAATAAGGGCGATGTCATaGCCCAGCCTCTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GKETYYLESKDNNTSSTKIRAMS*PSLFGL
Trigger: CAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTAT...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: GKETYYLESKDNNTSSTKWLQIL*EIKGTA
Trigger: GGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS CCA 90 bp AAAGCATTTGTTCCCCTATTTATACTTGTAGCATCAGGTGCATCTTaGTCATACGGTAAATCTTTGAAATTCGACAGTCCACACAAAGCG +
Preference number: 5 (lower is better)
Translates to: KAFVPLFILVASGAS*SYGKSLKFDSPHKA
Trigger: CGCTTTGTGTGGACTGTCGAATTTCAAAGATTTACCGTATGACCAAGATGCACCTGATGCTACAAGTATAAATAGGGGAACAAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS-3UTR CAA 90 bp GGGAAGGAAACATATTATTTGGAATCAAAGGACAATAATACGTCAAGCACCAAATACACGTCCCTGTGGTaGCAGATCTTGTTGGAAATC +
Preference number: 5 (lower is better)
Translates to: GKETYYLESKDNNTSSTKYTSLW*QILLEI
Trigger: GATTTCCAACAAGATCTGCAACCACAGGGACGTGTA...TTTGGTGCTTGACGTATTATTGTCCTTTGATTCCAAATAATATGTTTCCTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000644384.2
CDS TCA 90 bp ATATCTGACAAGGATTATAAAGCAGCCATCATAAGAATGCTTCAATaGGCAATTGCAAATCCTCTTGAAACAAAGGAAGAGCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: ISDKDYKAAIIRMLQ*AIANPLETKEELQN
Trigger: GTTCTGCAGCTCTTCCTTTGTTTCAAGAGGATTTGCAATTGCTCATTGAAGCATTCTTATGATGGCTGCTTTATAATCCTTGTCAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398397.3
ENST00000478680.1
CDS GCA 72 bp GGAGCAGGCAGGAACCTTCTGCAGCCCCCTCCTCACTaGCGCTGGTGCACGCACCTCCCTGACTGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GAGRNLLQPPPH*RWCTHLPDCSR
Trigger: TCTGGAGCAGTCAGGGAGGTGCGTGCACCAGCGGCAGTGAGGAGGGGGCTGCAGAAGGTTCCTGCCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 72 bp CCTCCTCACTGCCGCTGGTGCACGCACCTCCCTGACTaGTCCAGACCCCACCCTTGTGGTGTGAACACTCCC +
Preference number: 6 (lower is better)
Translates to: PPHCRWCTHLPD*SRPHPCGVNTP
Trigger: GGGAGTGTTCACACCACAAGGGTGGGGTCTGGAGCAGTCAGGGAGGTGCGTGCACCAGCGGCAGTGAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS TCA 72 bp CCGTCAGGTAGCCCGCGCAGAGCATGGAGGGGGAGATaGTGCCACCGTACACGTCCCTGTGGTTGCAGATCT +
Preference number: 6 (lower is better)
Translates to: PSGSPRRAWRGR*CHRTRPCGCRS
Trigger: AGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTCCATGCTCTGCGCGGGCTACCTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp GTGCTGTGGAGGATGCGGTGGGAAAAGCACCTGCCCTaGTTGGTCAGTGCCCAGCATTGGCAGCACCACTCC +
Preference number: 6 (lower is better)
Translates to: VLWRMRWEKHLP*LVSAQHWQHHS
Trigger: GGAGTGGTGCTGCCAATGCTGGGCACTGACCAAGCAGGGCAGGTGCTTTTCCCACCGCATCCTCCACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp TGTGGAGGATGCGGTGGGAAAAGCACCTGCCCTGCTTaGTCAGTGCCCAGCATTGGCAGCACCACTCCCCAT +
Preference number: 6 (lower is better)
Translates to: CGGCGGKSTCPA*SVPSIGSTTPH
Trigger: ATGGGGAGTGGTGCTGCCAATGCTGGGCACTGACCAAGCAGGGCAGGTGCTTTTCCCACCGCATCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CAA 72 bp CCCACCCGGACACAGCGGTACTCGTCCTCCCCGTCTTaGCAATCCGAGACTCCGTCACATCGAGCTATCAGC +
Preference number: 6 (lower is better)
Translates to: PTRTQRYSSSPS*QSETPSHRAIS
Trigger: GCTGATAGCTCGATGTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGAGTACCGCTGTGTCCGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp GGGGAGATGATGCCACCGTACACGTCCCTGTGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCCGCGTGGTTCAGGACAGGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GEMMPPYTSLWLQIL*EIKGTAAWFRTGEA
Trigger: CGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS TCA 72 bp CACCCAAAGCAGCCCCACCCTGACATGACCCAGGAGTaGACAGGGGTCTGGGAAGATGGTCAGCAGCACTCA +
Preference number: 6 (lower is better)
Translates to: HPKQPHPDMTQE*TGVWEDGQQHS
Trigger: TGAGTGCTGCTGACCATCTTCCCAGACCCCTGTTCACTCCTGGGTCATGTCAGGGTGGGGCTGCTTTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 72 bp CCACCCGGACACAGCGGTACTCGTCCTCCCCGTCTTTaGAATCCGAGACTCCGTCACATCGAGCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: PPGHSGTRPPRL*NPRLRHIELSA
Trigger: AGCTGATAGCTCGATGTGACGGAGTCTCGGATTGCAAAGACGGGGAGGACGAGTACCGCTGTGTCCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp TGTACACCCCAGGCTTGTTCACCTCTGCGCAGCCGATaGCAAAGCTGGTCGCTCCCACTAACTTCCACAGCC +
Preference number: 6 (lower is better)
Translates to: CTPQACSPLRSR*QSWSLPLTSTA
Trigger: GGCTGTGGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCTGGGGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp GAGGGGGAGATGATGCCACCGTACACGTCCCTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACGGCCGCGTGGTTCAGGACAGGGGAG +
Preference number: 6 (lower is better)
Translates to: EGEMMPPYTSLWLQI*LEIKGTAAWFRTGE
Trigger: CTCCCCTGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp CAGAGCATGGAGGGGGAGATGATGCCACCGTACACGTCCCTGTGGTaGCAGATCTTGTTGGAAATCAAAGGGACGGCCGCGTGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: QSMEGEMMPPYTSLW*QILLEIKGTAAWFR
Trigger: CCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTCCATGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS TCA 72 bp AGTCATCGGAGCACATGGTCTTCCACGAAGCAGCTGTaGACACCTGGAGCACGGCATTCTGACCACCCACCC +
Preference number: 6 (lower is better)
Translates to: SHRSTWSSTKQL*TPGARHSDHPP
Trigger: GGGTGGGTGGTCAGAATGCCGTGCTCCAGGTGTTCACAGCTGCTTCGTGGAAGACCATGTGCTCCGATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp GCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTCTATGACCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: ATARARTCFHPR*VSCSPFYDHRL
Trigger: CAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp CAGGCTTGTTCACCTCTGCGCAGCCGATGCCAAAGCTaGTCGCTCCCACTAACTTCCACAGCCTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: QACSPLRSRCQS*SLPLTSTASSL
Trigger: AAGAGAGGAGGCTGTGGAAGTTAGTGGGAGCGACCAGCTTTGGCATCGGCTGCGCAGAGGTGAACAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp TTGCAGATCTTGTTGGAAATCAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCGTCACCTGCTCCATCC +
Preference number: 6 (lower is better)
Translates to: LQILLEIKGTAA*FRTGEASPAPS
Trigger: GGATGGAGCAGGTGACGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
CDS CAA 72 bp GAGGGGGAGATGATGCCACCGTACACGTCCCTGTGGTaGCAGATCTTGTTGGAAATCAAAGGGACGGCCGCG +
Preference number: 6 (lower is better)
Translates to: EGEMMPPYTSLW*QILLEIKGTAA
Trigger: CGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS TCA 72 bp CTGCGAGAGCAAGGACATGTTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATGACCACAGGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: LREQGHVSTHDA*AVAPSMTTGCA
Trigger: TGCACAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp GCCACTGCGAGAGCAAGGACATGTTTCCACCCACGATaGGTGAGCTGTAGCCCCTTCTATGACCACAGGCTA +
Preference number: 6 (lower is better)
Translates to: ATARARTCFHPR*VSCSPFYDHRL
Trigger: TAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp ATGCAGTCACCTTGTCATCTGGCAAGAGGTGATCGATaGACACAAACTCCTCCCGGAACTGCCCCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: MQSPCHLARGDR*TQTPPGTAPPA
Trigger: CGCTGGAGGGGCAGTTCCGGGAGGAGTTTGTGTCCATCGATCACCTCTTGCCAGATGACAAGGTGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp TTGCAGATCTTGTTGGAAATCAAAGGGACGGCCGCGTaGTTCAGGACAGGGGAGGCGTCACCTCCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LQILLEIKGTAA*FRTGEASPPSS
Trigger: AGAGGATGGAGGTGACGCCTCCCCTGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398405.5
ENST00000476848.5
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp TGCCACCGTACACGTCCCTGTGGTTGCAGATCTTGTTaGAAATCAAAGGGACGGCCGCGTGGTTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: CHRTRPCGCRSC*KSKGRPRGSGQ
Trigger: CTGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp GGGGCTGGATTGTCCAACAGGGAAACTAGACCCACCTaGATGGTCCATGACTTGGGGAGGTACAAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GAGLSNRETRPT*MVHDLGRYKPV
Trigger: GACAGGCTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478680.1
CDS TCA 72 bp ACTCCTCCCGGAACTGCCCCTCCAGCGAGCTCACTCTaGGGTTATCTGAACTCACATAGCTTGGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: TPPGTAPPASSL*GYLNSHSLGNP
Trigger: TGGGTTTCCCAAGCTATGTGAGTTCAGATAACCTCAGAGTGAGCTCGCTGGAGGGGCAGTTCCGGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS TCA 72 bp CTGCGAGAGCAAGGACATGTTTCCACCCACGATGCGTaGGCTGTAGCCCCTTCTATGACCACAGGCTATGGA +
Preference number: 6 (lower is better)
Translates to: LREQGHVSTHDA*AVAPSMTTGYG
Trigger: TCCATAGCCTGTGGTCATAGAAGGGGCTACAGCTCACGCATCGTGGGTGGAAACATGTCCTTGCTCTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS TCA 72 bp GCACATTCTCTAGTTCAGTCCTACCTGCTCCACCTCTaGCCCGGTTATTCCATGGGGGATGAGGGGATGTGC +
Preference number: 6 (lower is better)
Translates to: AHSLVQSYLLHL*PGYSMGDEGMC
Trigger: GCACATCCCCTCATCCCCCATGGAATAACCGGGTCAGAGGTGGAGCAGGTAGGACTGAACTAGAGAATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482761.1
CDS CCA 72 bp ATGGAGGGGGAGATGATGCCACCGTACACGTCCCTGTaGTTGCAGATCTTGTTGGAAATCAAAGGGACGGCC +
Preference number: 6 (lower is better)
Translates to: MEGEMMPPYTSL*LQILLEIKGTA
Trigger: GGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCATCTCCCCCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 72 bp ATGCCACCGTACACGTCCCTGTGGTTGCAGATCTTGTaGGAAATCAAAGGGACGGCCGCGTGGTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: MPPYTSLWLQIL*EIKGTAAWFRT
Trigger: TGTCCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 72 bp ATGATGCCACCGTACACGTCCCTGTGGTTGCAGATCTaGTTGGAAATCAAAGGGACGGCCGCGTGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: MMPPYTSLWLQI*LEIKGTAAWFR
Trigger: CCTGAACCACGCGGCCGTCCCTTTGATTTCCAACAAGATCTGCAACCACAGGGACGTGTACGGTGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp CTGGATTGTCCAACAGGGAAACTAGACCCACCTGGATaGTCCATGACTTGGGGAGGTACAAGCCTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: LDCPTGKLDPPG*SMTWGGTSLSL
Trigger: CAGAGACAGGCTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478680.1
CDS CCA 72 bp GTGAGGCTGGAGACTCCTCTCCAACTGTACATTACTTaGAGGTTAGTCTCTCTGTCTTCCCTCTGGACCCGC +
Preference number: 6 (lower is better)
Translates to: VRLETPLQLYIT*RLVSLSSLWTR
Trigger: GCGGGTCCAGAGGGAAGACAGAGAGACTAACCTCCAAGTAATGTACAGTTGGAGAGGAGTCTCCAGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp GGGGCTGGATTGTCCAACAGGGAAACTAGACCCACCTaGATGGTCCATGACTTGGGGAGGTACAAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: GAGLSNRETRPT*MVHDLGRYKLK
Trigger: TTTCAGCTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CAA 72 bp CATAGCTTGGGAAACCCAGTTGGGCACAGGCAACATTaGCGTAGTGACCCTTCCAGTCATCGGAGCACATGG +
Preference number: 6 (lower is better)
Translates to: HSLGNPVGHRQH*RSDPSSHRSTW
Trigger: CCATGTGCTCCGATGACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp CTGAACTCACATAGCTTGGGAAACCCAGTTGGGCACAGGCAACATTaGCGTAGTGACCCTTCCAGTCATCGGAGCACATGGTCTTCCACG +
Preference number: 6 (lower is better)
Translates to: LNSHSLGNPVGHRQH*RSDPSSHRSTWSST
Trigger: CGTGGAAGACCATGTGCTCCGATGACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGCTATGTGAGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp CCTGACGTCCAGCACACTTTTCCATCGGGGAAGTTCTCTTCAGAGTaGGGCAGGCACACAGGCTGGATCATTTCATTGAACGTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: PDVQHTFPSGKFSSE*GRHTGWIISLNVSG
Trigger: GCCACTCACGTTCAATGAAATGATCCAGCCTGTGTGCCTGCCCAACTCTGAAGAGAACTTCCCCGATGGAAAAGTGTGCTGGACGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp ATAGCTTGGGAAACCCAGTTGGGCACAGGCAACATTTaGGTAGTGACCCTTCCAGTCATCGGAGCACATGGT +
Preference number: 6 (lower is better)
Translates to: IAWETQLGTGNI*VVTLPVIGAHG
Trigger: ACCATGTGCTCCGATGACTGGAAGGGTCACTACGCAAATGTTGCCTGTGCCCAACTGGGTTTCCCAAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS GCA 72 bp GGGCGATGTCATTGCCCAGCCTCTTTGGCTTGTACTTaGTGTGGTAGACAATCTTCTCCACCAAGTGGGATG +
Preference number: 6 (lower is better)
Translates to: GRCHCPASLACT*CGRQSSPPSGM
Trigger: CATCCCACTTGGTGGAGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATGACATCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000478680.1
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 72 bp AACAGGGAAACTAGACCCACCTGGATGGTCCATGACTaGGGGAGGTACAAGCCTGTCTCTGCCATAACATGG +
Preference number: 6 (lower is better)
Translates to: NRETRPTWMVHD*GRYKPVSAITW
Trigger: CCATGTTATGGCAGAGACAGGCTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478680.1
CDS CAA 72 bp ACCTCACTCTCAGCACCTCTGAGGTCGTCTTGGCATTaGAGGGCTGAACTCAACATTGGTCACTGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: TSLSAPLRSSWH*RAELNIGHCKE
Trigger: CTCCTTGCAGTGACCAATGTTGAGTTCAGCCCTCAAATGCCAAGACGACCTCAGAGGTGCTGAGAGTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS TCA 72 bp CTCAGCACCTCTGAGGTCGTCTTGGCATTTGAGGGCTaGACTCAACATTGGTCACTGCAAGGAGTCTATCAG +
Preference number: 6 (lower is better)
Translates to: LSTSEVVLAFEG*TQHWSLQGVYQ
Trigger: CTGATAGACTCCTTGCAGTGACCAATGTTGAGTTCAGCCCTCAAATGCCAAGACGACCTCAGAGGTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 72 bp GAAGATGGTCAGCAGCACTCACTCATAAACACAGTGTaGAGCAGTGATGATCCACAGGGGCGTGATGACAGA +
Preference number: 6 (lower is better)
Translates to: EDGQQHSLINTV*SSDDPQGRDDR
Trigger: TCTGTCATCACGCCCCTGTGGATCATCACTGCTGCACACTGTGTTTATGAGTGAGTGCTGCTGACCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 72 bp TCACCCTGCTTGTTTATGCTGTATATGCAACTGCACTaGCACGCCCTACAGAAACACAGACCCACACCCCAT +
Preference number: 6 (lower is better)
Translates to: SPCLFMLYMQLH*HALQKHRPTPH
Trigger: ATGGGGTGTGGGTCTGTGTTTCTGTAGGGCGTGGCAGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS GCA 72 bp TCAGGCAAGATGTGGTCCCATCACCCTGCTTGTTTATaGTGTATATGCAACTGCACTGCCACGCCCTACAGA +
Preference number: 6 (lower is better)
Translates to: SGKMWSHHPACL*CICNCTATPYR
Trigger: TCTGTAGGGCGTGGCAGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGATGGGACCACATCTTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp AGGATCGGGCTGTCTTCATCACCTCAGGAACTCAGGTaGCTACTTGTCCCCTTCCTCTTCAGGTTTTTAGGT +
Preference number: 6 (lower is better)
Translates to: RIGLSSSPQELR*LLVPFLFRFLG
Trigger: ACCTAAAAACCTGAAGAGGAAGGGGACAAGTAGCCACCTGAGTTCCTGAGGTGATGAAGACAGCCCGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 90 bp ATGGTGGGAGAGGTTATCAGGCAAGATGTGGTCCCATCACCCTGCTaGTTTATGCTGTATATGCAACTGCACTGCCACGCCCTACAGAAA +
Preference number: 6 (lower is better)
Translates to: MVGEVIRQDVVPSPC*FMLYMQLHCHALQK
Trigger: TTTCTGTAGGGCGTGGCAGTGCAGTTGCATATACAGCATAAACAAGCAGGGTGATGGGACCACATCTTGCCTGATAACCTCTCCCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS TCA 72 bp ACAAGTTACCCCCAGCTGATGATGATGGGTCCACAGTaGGGCTGGAGACTCCTCTCCAACTGTACATTACTT +
Preference number: 6 (lower is better)
Translates to: TSYPQLMMMGPQ*GWRLLSNCTLL
Trigger: AAGTAATGTACAGTTGGAGAGGAGTCTCCAGCCTCACTGTGGACCCATCATCATCAGCTGGGGGTAACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp CTGGATTGTCCAACAGGGAAACTAGACCCACCTGGATaGTCCATGACTTGGGGAGGTACAAGTCATAAACAC +
Preference number: 6 (lower is better)
Translates to: LDCPTGKLDPPG*SMTWGGTSHKH
Trigger: GTGTTTATGACTTGTACCTCCCCAAGTCATGGACCATCCAGGTGGGTCTAGTTTCCCTGTTGGACAATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp CAGCTTCATAAGGGCGATGTCATTGCCCAGCCTCTTTaGCTTGTACTTGCTGTGGTAGACAATCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: QLHKGDVIAQPL*LVLAVVDNLLH
Trigger: GTGGAGAAGATTGTCTACCACAGCAAGTACAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000398397.3
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000478680.1
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CAA 72 bp CAGCACACTTTTCCATCGGGGAAGTTCTCTTCAGAGTaGGGCAGGCACACAGGCTGGATCATTTCATTGAAC +
Preference number: 6 (lower is better)
Translates to: QHTFPSGKFSSE*GRHTGWIISLN
Trigger: GTTCAATGAAATGATCCAGCCTGTGTGCCTGCCCAACTCTGAAGAGAACTTCCCCGATGGAAAAGTGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398405.5
ENST00000433957.7
ENST00000474596.5
ENST00000476848.5
ENST00000482761.1
ENST00000644384.2
ENST00000652415.1
CDS CCA 72 bp CTCATTGACCTCAGGTATCCTGAAAACCTAGGAAGATaGTGGGAGAGGTTATCAGGCAAGATGTGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: LIDLRYPENLGR*WERLSGKMWSH
Trigger: ATGGGACCACATCTTGCCTGATAACCTCTCCCACCATCTTCCTAGGTTTTCAGGATACCTGAGGTCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp CTCTACCTCATAATTCCCGAGTCCCAAAAATGTAGATaGCACCACGGAAGAGATAGTAGGCCACAGTGTTAC +
Preference number: 6 (lower is better)
Translates to: LYLIIPESQKCR*HHGRDSRPQCY
Trigger: GTAACACTGTGGCCTACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGACTCGGGAATTATGAGGTAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398397.3
ENST00000433957.7
ENST00000644384.2
CDS GCA 72 bp TCTTGGCATTTGAGGGCTGAACTCAACATTGGTCACTaGAAGGAGTCTATCAGGCACTACTGTTCATCAAAC +
Preference number: 6 (lower is better)
Translates to: SWHLRAELNIGH*KESIRHYCSSN
Trigger: GTTTGATGAACAGTAGTGCCTGATAGACTCCTTGCAGTGACCAATGTTGAGTTCAGCCCTCAAATGCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476848.5
CDS CCA 72 bp GAAAAGCTTATAATTCCCGAGTCCCAAAAATGTAGATaGCACCACGGAAGAGATAGTAGGCCACAGTGTTAC +
Preference number: 6 (lower is better)
Translates to: EKLIIPESQKCR*HHGRDSRPQCY
Trigger: GTAACACTGTGGCCTACTATCTCTTCCGTGGTGCCATCTACATTTTTGGGACTCGGGAATTATAAGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652415.1
CDS CAA 90 bp TGCCATGAAACTTACAAATTTAACTATCCTTTCCCCCTCCCCTCTTaGCAGAGAAGTCTCAGCCCAAAGAAAGGTGCCTTAATTAGGGAA +
Preference number: 6 (lower is better)
Translates to: CHETYKFNYPFPLPS*QRSLSPKKGALIRE
Trigger: TTCCCTAATTAAGGCACCTTTCTTTGGGCTGAGACTTCTCTGCAAAGAGGGGAGGGGGAAAGGATAGTTAAATTTGTAAGTTTCATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482761.1
CDS CCA 72 bp AGACACGTTGAGGTCTTAACTCTTAGTACCTCAGAATaGCATCTTATTTGGAGATGGCCTGGAGAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: RHVEVLTLSTSE*HLIWRWPGESL
Trigger: TAAAGACTCTCCAGGCCATCTCCAAATAAGATGCCATTCTGAGGTACTAAGAGTTAAGACCTCAACGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482761.1
CDS CAA 72 bp GTAGCATCAGGTGCATCTTGGTCATACGGTAAATCTTaGAAATTCGACAGTCCACACAAAGCGCATTCAGTA +
Preference number: 6 (lower is better)
Translates to: VASGASWSYGKS*KFDSPHKAHSV
Trigger: TACTGAATGCGCTTTGTGTGGACTGTCGAATTTCAAAGATTTACCGTATGACCAAGATGCACCTGATGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1
CDS TCA 72 bp CATAAGAATGCTTCAATGAGCAATTGCAAATCCTCTTaGAACAAAGGAAGAGCTGCAGAACCACATAGAGAC +
Preference number: 6 (lower is better)
Translates to: HKNASMSNCKSS*NKGRAAEPHRD
Trigger: GTCTCTATGTGGTTCTGCAGCTCTTCCTTTGTTTCAAGAGGATTTGCAATTGCTCATTGAAGCATTCTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398397.3
ENST00000478680.1
CDS CAA 90 bp TTTATACTTGTAGCATCAGGTGCATCTTGGTCATACGGTAAATCTTaGAAATTCGACAGTCCACACAAAGCGCATTCAGTATCGATTAAC +
Preference number: 6 (lower is better)
Translates to: FILVASGASWSYGKS*KFDSPHKAHSVSIN
Trigger: GTTAATCGATACTGAATGCGCTTTGTGTGGACTGTCGAATTTCAAAGATTTACCGTATGACCAAGATGCACCTGATGCTACAAGTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398405.5
ENST00000652415.1