RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMPRSS13 (Homo sapiens)

Ensembl gene IDs: ENSG00000137747

Ensembl transcript IDs: ENST00000430170.6, ENST00000445164.6, ENST00000524993.6, ENST00000525794.1, ENST00000526090.1, ENST00000528135.1, ENST00000528626.5

Found 759 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGGAATGAGAGAGGCAGTCCACCTGGACCTCCCTGGGGCCCCTaGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTC +
Preference number: 1 (lower is better)
Translates to: TGNERGSPPGPPWGP*EPTREQHLFLNAFV
Trigger: GACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGGTCCAGGTGGACTGCCTCTCTCATTCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp AACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTaGATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGC +
Preference number: 1 (lower is better)
Translates to: NGSSFSPKTVQALGS*IHQNPRSIPGQQWR
Trigger: GCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 90 bp AGGACAGCTACTGGGAATGAGAGAGGCAGTCCACCTGGACCTCCCTaGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAAC +
Preference number: 1 (lower is better)
Translates to: RTATGNERGSPPGPP*GPWEPTREQHLFLN
Trigger: GTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGGTCCAGGTGGACTGCCTCTCTCATTCCCAGTAGCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR TCA 90 bp CCACCTGGGCCGCTGGCATCTGCCCACACTGGGCTAGTCTGTAAGTaGGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: PPGPLASAHTGLVCK*GSEKQEFPALPWAL
Trigger: CAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACTTACAGACTAGCCCAGTGTGGGCAGATGCCAGCGGCCCAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR TCA 90 bp CACAGTCCGACTGGTGACATCCACGGCACCAGCAGGGGGTCTGGGTaGGGACTTGATGCTCATAAAGCCAACGGGAGCAGCTTTTCACCG +
Preference number: 1 (lower is better)
Translates to: HSPTGDIHGTSRGSG*GLDAHKANGSSFSP
Trigger: CGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGCATCAAGTCCTCACCCAGACCCCCTGCTGGTGCCGTGGATGTCACCAGTCGGACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp AAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATaGCAGAGGGCTCTGGCTCCATTCTTCAGGGTCCTCCCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: KSRYSSSLSHLYRCL*QRALAPFFRVLPEP
Trigger: GGGCTCAGGGAGGACCCTGAAGAATGGAGCCAGAGCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTaGGAAGCTGCATCCACCAAAACCCACGATCCATCCCAGGACAGC +
Preference number: 1 (lower is better)
Translates to: IKPTGAAFHRRRSRP*EAASTKTHDPSQDS
Trigger: GCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 90 bp TGTGCGAGGAAACACCAGCTCACAGGCTCAGAGCACGAGAATGGCTaGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTAC +
Preference number: 1 (lower is better)
Translates to: CARKHQLTGSEHENG*TNQRVLRGFQKSRY
Trigger: GTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGCCTGTGAGCTGGTGTTTCCTCGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR TCA 90 bp ATGCTTATGCCAGAGGGCTCTGGCTCCATTCTTCAGGGTCCTCCCTaGGCCCCCATTACCTGTCTTCTCCAATCTTTTCGGGACCCACCT +
Preference number: 1 (lower is better)
Translates to: MLMPEGSGSILQGPP*APITCLLQSFRDPP
Trigger: AGGTGGGTCCCGAAAAGATTGGAGAAGACAGGTAATGGGGGCTCAGGGAGGACCCTGAAGAATGGAGCCAGAGCCCTCTGGCATAAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR GCA 90 bp TTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATaGTTATGCCAGAGGGCTCTGGCTCCATTCTTCAGGGTCCTCCCT +
Preference number: 1 (lower is better)
Translates to: FQKSRYSSSLSHLYR*LCQRALAPFFRVLP
Trigger: AGGGAGGACCCTGAAGAATGGAGCCAGAGCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR GCA 90 bp AACCCAGCTGCTGGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCCACTGATGGGAGGACCCAGAGTAGA +
Preference number: 1 (lower is better)
Translates to: NPAAGRSSLSRSHSS*CYRWEATDGRTQSR
Trigger: TCTACTCTGGGTCCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR TCA 90 bp GTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCCTaGGTATCTCCTAGGGGCTCCAGATGCTGTAGTGACTTGGGGGAT +
Preference number: 1 (lower is better)
Translates to: VVSDLLASPNKDLLP*VSPRGSRCCSDLGD
Trigger: ATCCCCCAAGTCACTACAGCATCTGGAGCCCCTAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp TGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTaGTTCCCTGAGTATCTCCTAGGGGCTCCAGATGCTGTAGTGACT +
Preference number: 1 (lower is better)
Translates to: WTSSCRICLPAQTRI*FPEYLLGAPDAVVT
Trigger: AGTCACTACAGCATCTGGAGCCCCTAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATaGAGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTGCTTGCCA +
Preference number: 1 (lower is better)
Translates to: REQHLFLNAFVRALG*RNSLWTSSCRICLP
Trigger: TGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp CAGGTCACACAACTTTTATTGCTGAAGACCATCGCTGGCGGCTGCTaGAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCC +
Preference number: 1 (lower is better)
Translates to: QVTQLLLLKTIAGGC*RQECGLLPSLANIP
Trigger: GGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTGTGTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp CCAGCTGCTGGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACTGATGGGAGGACCCAGAGTAGATTT +
Preference number: 1 (lower is better)
Translates to: PAAGRSSLSRSHSSC*YRWEATDGRTQSRF
Trigger: AAATCTACTCTGGGTCCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR CCA 90 bp CTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTaGGATGCAGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTGCT +
Preference number: 1 (lower is better)
Translates to: LRGNSICFLTPSSEP*DAETVCGPRRVGFA
Trigger: AGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 90 bp GGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTTaGGAATCAGATCGACCTGGTTCCAATCCCAGAGCTACCACCTAT +
Preference number: 1 (lower is better)
Translates to: GKQFASLEPGGESTA*ESDRPGSNPRATTY
Trigger: ATAGGTGGTAGCTCTGGGATTGGAACCAGGTCGATCTGATTCCCAAGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR GCA 90 bp GCCCTGGGATGCAGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTaGTTGCCAGCCCAAACAAGGATTTGCTTCCCTGAGTATCTCCTA +
Preference number: 1 (lower is better)
Translates to: ALGCRNSLWTSSCRI*LPAQTRICFPEYLL
Trigger: TAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp TCTCAGGTCACACAACTTTTATTGCTGAAGACCATCGCTGGCGGCTaGTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATT +
Preference number: 1 (lower is better)
Translates to: SQVTQLLLLKTIAGG*CRQECGLLPSLANI
Trigger: AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTGTGTGACCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524993.6
3UTR CCA 90 bp TTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGTTTGTaGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATT +
Preference number: 1 (lower is better)
Translates to: FLNAFVRALGCRNSL*TSSCRICLPAQTRI
Trigger: AATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 90 bp CGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACACTaGAGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCTCGAAA +
Preference number: 1 (lower is better)
Translates to: RHWPQSKKKNILREH*REIYRWEGHSDLSK
Trigger: TTTCGAGAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR TCA 90 bp ACGGTACTCAACTCTTGTCTCCAGGTAATTTCCAGCCTGGGATTTTaGGAAGAGTTGACAGCTCTGCTGGTTTCTGAAAAACTTGGGAGA +
Preference number: 1 (lower is better)
Translates to: TVLNSCLQVISSLGF*EELTALLVSEKLGR
Trigger: TCTCCCAAGTTTTTCAGAAACCAGCAGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGAAATTACCTGGAGACAAGAGTTGAGTACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 90 bp AACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATaGTTGATAACAAAAACTATCACAAAATCCTCTGCAGAAACTGAA +
Preference number: 1 (lower is better)
Translates to: NRAGKGHEERIPMHK*LITKTITKSSAETE
Trigger: TTCAGTTTCTGCAGAGGATTTTGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCAGCAGACAGTGGAGGTaGGAGTCCGATGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: ASTKTHDPSQDSNGATWASRQWR*ESDGAR
Trigger: CCGGGCACCATCGGACTCCCACCTCCACTGTCTGCT...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGCACAGTCCGACTGGTaGCATCCACGGCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSAQSDW*HPRHQQ
Trigger: CTGCTGGTGCCGTGGATGTCACCAGTCGGACTGTGC...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTAGCAATGGCGCCACCTaGGCCGCTGGCATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASNGAT*AAGICP
Trigger: TGGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCT...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCAGACGGTCCAGGCCCTaGGAAGCTGCATCCACCAAA +
Preference number: 2 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCRRSRP*EAASTK
Trigger: TTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCT...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCACAGCAGCCGGTGCTGTaGAGAGCAGCAGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPQQPVL*RAAGQL
Trigger: CAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTG...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGATCCCAGGACAGCAATaGCGCCACCTGGGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKIPGQQ*RHLGRW
Trigger: CCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGAT...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGGGGGATGCCCATCCTaGGGACTTTGTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSGGCPS*GLCPVS
Trigger: AGAGACTGGACAAAGTCCCCAGGATGGGCATCCCCC...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTCCTCCCTGGGGCCCCTaGGAGCCTACGCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLPPWGP*EPTREQ
Trigger: CTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGG...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 90 bp CGACTGGTGACATCCACGGCACCAGCAGGGGGTCTGGGTGAGGACTaGATGCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGG +
Preference number: 2 (lower is better)
Translates to: RLVTSTAPAGGLGED*MLIKPTGAAFHRRR
Trigger: CCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGCATCAAGTCCTCACCCAGACCCCCTGCTGGTGCCGTGGATGTCACCAGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGCTTCACAGCAGCCGGTaGTGTGCAGAGCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKLHSSR*CAEQQA
Trigger: GGCCTGCTGCTCTGCACAGCACCGGCTGCTGTGAAG...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAAGCAGACAGTGGAGGTaGGAGTCCGATGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPSRQWR*ESDGAR
Trigger: CCGGGCACCATCGGACTCCCACCTCCACTGTCTGCT...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 90 bp GGAAGGCCCAGGCTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTaGCAGGAACAGGGCCAACTTAGATCCTTCAGCAGGGCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GRPRLLAGESRHVDD*QEQGQLRSFSRAAW
Trigger: CCAGGCAGCCCTGCTGAAGGATCTAAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAGCCTGGGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCTGGGGGTCTTGGGCTaGTTGATGCCAGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: AGGCCRQECGLLPSLANILGVLG*LMPAVK
Trigger: CTTGACAGCTGGCATCAATCAGCCCAAGACCCCCAG...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCCTTCAGGGTCCTCCCTaGGCCCCCATTACCTGTCTT +
Preference number: 2 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGLQGPP*APITCL
Trigger: AAGACAGGTAATGGGGGCTCAGGGAGGACCCTGAAG...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR GCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTCAGCAGCCGGTGCTGTaGAGAGCAGCAGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLQQPVL*RAAGQL
Trigger: CAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTG...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCTTCACAGCAGCCGGTaGTGTGCAGAGCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: REQHLFLNAFVRALGCRNLHSSR*CAEQQA
Trigger: GGCCTGCTGCTCTGCACAGCACCGGCTGCTGTGAAG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGTGGGAGTCCGATGGTaGCCGGTGGCCATTAGCCCA +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCVGVRW*PVAISP
Trigger: TGGGCTAATGGCCACCGGGCACCATCGGACTCCCAC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCGTGGGAGTCCGATGGTaGCCGGTGGCCATTAGCCCA +
Preference number: 2 (lower is better)
Translates to: CGPRRVGFACQPKQGFASVGVRW*PVAISP
Trigger: TGGGCTAATGGCCACCGGGCACCATCGGACTCCCAC...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTTGGGCCGCTGGCATCTaGCCACACTGGGCTAGTCTG +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCWAAGI*PHWASL
Trigger: CAGACTAGCCCAGTGTGGGCAGATGCCAGCGGCCCA...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACGCCACCATAGCTCCCTaGTCCCCGAAAACATCGTAT +
Preference number: 2 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHATIAP*SPKTSY
Trigger: ATACGATGTTTTCGGGGAGCAGGGAGCTATGGTGGC...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTCCGATGGTGCCCGGTaGCCATTAGCCCAGATGATG +
Preference number: 2 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASDGAR*PLAQMM
Trigger: CATCATCTGGGCTAATGGCCACCGGGCACCATCGGA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATCCAGCCTGGGATTTTaGGAAGAGTTGACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSSSLGF*EELTAL
Trigger: CAGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAGTCCCCTGTCCACAGTaGTCTTCTGAGAACCTCTGC +
Preference number: 2 (lower is better)
Translates to: AQSTRMAGLTRESSEASRVPCPQ*SSENLC
Trigger: GCAGAGGTTCTCAGAAGATCACTGTGGACAGGGGAC...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR GCA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCAGTTGCTCCCGCCTATaGCACCATAGCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NLFGTHLGYPSSAELPLASCSRL*HHSSLL
Trigger: GAGCAGGGAGCTATGGTGGCATAGGCGGGAGCAACT...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR CCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACGGAATCAGATCGACCTaGTTCCAATCCCAGAGCTAC +
Preference number: 2 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHGIRST*FQSQSY
Trigger: GTAGCTCTGGGATTGGAACCAGGTCGATCTGATTCC...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR TCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAACAGACAGCTGGGATTaGCCCCAGGCATCACATTTG +
Preference number: 2 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRETDSWD*PQASHL
Trigger: CAAATGTGATGCCTGGGGTCAATCCCAGCTGTCTGT...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
3UTR-3UTR TCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTCCTAGCCTGCCAGGATaGTTAGTTGCTCCCGCCTAT +
Preference number: 2 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAPSLPG*LVAPAY
Trigger: ATAGGCGGGAGCAACTAATCATCCTGGCAGGCTAGG...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCAGGCCCTGGGAAGCTaGATCCACCAAAACCCACGA +
Preference number: 2 (lower is better)
Translates to: REQHLFLNAFVRALGCRNQALGS*IHQNPR
Trigger: TCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCAGGTGGGGAGAGCACTaGTTGGGAATCAGATCGACC +
Preference number: 2 (lower is better)
Translates to: NLFGTHLGYPSSAELPLARWGEH*LGIRST
Trigger: GGTCGATCTGATTCCCAAGCAGTGCTCTCCCCACCT...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAGCCAGGATGATTAGTTaGTCCCGCCTATGCCACCAT +
Preference number: 2 (lower is better)
Translates to: AQSTRMAGLTRESSEASRARMIS*SRLCHH
Trigger: ATGGTGGCATAGGCGGGAGCAACTAATCATCCTGGC...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGGGGGATGCCCATCCTaGGGACTTTGTCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCGGCPS*GLCPVS
Trigger: AGAGACTGGACAAAGTCCCCAGGATGGGCATCCCCC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCGATGCTGTAGTGACTTaGGGGATGCCCATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: CGPRRVGFACQPKQGFASDAVVT*GMPILG
Trigger: CCCCAGGATGGGCATCCCCCAAGTCACTACAGCATC...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGTTCAGCAGGGCTGCCTaGAAGGCATGGGACCATGTT +
Preference number: 2 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKFSRAA*KAWDHV
Trigger: AACATGGTCCCATGCCTTCCAGGCAGCCCTGCTGAA...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCGGGTCTTGGGCTGATTaGTGCCAGCTGTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: CGPRRVGFACQPKQGFASGSWAD*CQLSRL
Trigger: AAGCCTTGACAGCTGGCATCAATCAGCCCAAGACCC...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTGCCCAGCAACTGCCTaGCTGGCCTGTAGGTCCACC +
Preference number: 2 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLCPATA*LACRST
Trigger: GGTGGACCTACAGGCCAGGCAGGCAGTTGCTGGGCA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCAAAAACTTGGGAGAGTaGCAATGCACACATATGCAC +
Preference number: 2 (lower is better)
Translates to: ASTKTHDPSQDSNGATWAKNLGE*QCTHMH
Trigger: GTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTT...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 90 bp CTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGTTaGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGG +
Preference number: 2 (lower is better)
Translates to: LFLNAFVRALGCRNS*WTSSCRICLPAQTR
Trigger: CCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGTCCAGCCTGGGATTTTaGGAAGAGTTGACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKSSLGF*EELTAL
Trigger: CAGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGA...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTATACGACATTTCCCATaGATCCCCTGGGGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCIRHFP*IPWGSW
Trigger: CCAAGACCCCCAGGGGATTCATGGGAAATGTCGTAT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGTCAGAGCCCTGGGATaGAGAAACAGTTTGTGGACC +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCVRALG*RNSLWT
Trigger: GGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGAC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 90 bp GCTCCAGATGCTGTAGTGACTTGGGGGATGCCCATCCTGGGGACTTaGTCCAGTCTCTTCATCCAGTTCCTTGAGGCCAGAAATATTCTG +
Preference number: 2 (lower is better)
Translates to: APDAVVTWGMPILGT*SSLFIQFLEARNIL
Trigger: CAGAATATTTCTGGCCTCAAGGAACTGGATGAAGAGACTGGACAAAGTCCCCAGGATGGGCATCCCCCAAGTCACTACAGCATCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 90 bp CTGGGATGCAGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTGCTaGCCAGCCCAAACAAGGATTTGCTTCCCTGAGTATCTCCTAGGG +
Preference number: 2 (lower is better)
Translates to: LGCRNSLWTSSCRIC*PAQTRICFPEYLLG
Trigger: CCCTAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTAGCTCTGCTGGTTTCTaGAAAACTTGGGAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: CCRQECGLLPSLANIPQCSSAGF*KTWESG
Trigger: GCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGCT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGATTGTGTAGCCTCCTTTaGTCCTTAGCAACAACGTTG +
Preference number: 2 (lower is better)
Translates to: AQSTRMAGLTRESSEASRLCSLL*SLATTL
Trigger: CAACGTTGTTGCTAAGGACCAAAGGAGGCTACACAA...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR TCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTAGCTCTGCTGGTTTCTaGAAAACTTGGGAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSSAGF*KTWESG
Trigger: GCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGCT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp ACTCCCACACGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACACCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 2 (lower is better)
Translates to: TPTRHWPQSKKKNILREHLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...GTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATGCCCAGCAACTGCCTaGCTGGCCTGTAGGTCCACC +
Preference number: 2 (lower is better)
Translates to: GHEERIPMHKCLITKTITCPATA*LACRST
Trigger: GGTGGACCTACAGGCCAGGCAGGCAGTTGCTGGGCA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR-3UTR GCA 90 bp AACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGCATTCAGACAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: NILREHWREIYRWEGHSDRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...GTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTTGCAGAAACAGTTTGTaGACCTCGTCGTGTCGGATT +
Preference number: 2 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLCRNSL*TSSCRI
Trigger: AATCCGACACGACGAGGTCCACAAACTGTTTCTGCA...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTGATTTTGAGAAGAGTTaGCAGCTCTGCTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLDFEKS*QLCWFL
Trigger: CAGAAACCAGCAGAGCTGTCAACTCTTCTCAAAATC...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCCTTCATCCAGTTCCTTaGGGCCAGAAATATTCTGTA +
Preference number: 2 (lower is better)
Translates to: CGPRRVGFACQPKQGFASLHPVP*GQKYSV
Trigger: TACAGAATATTTCTGGCCTCAAGGAACTGGATGAAG...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCCATCAATTTGTAATGTaGGATGTGTCATTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGHQFVM*DVSFGA
Trigger: TGCTCCAAATGACACATCTCACATTACAAATTGATG...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR GCA 90 bp AAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACT +
Preference number: 2 (lower is better)
Translates to: KKKNILREHWREIYRWEGSHSSC*YRWEAT
Trigger: AGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACT...CCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACACAGCAACTGCCTGCCTaGCCTGTAGGTCCACCCTTT +
Preference number: 2 (lower is better)
Translates to: GHEERIPMHKCLITKTITQQLPA*PVGPPF
Trigger: AAAGGGTGGACCTACAGGCCAGGCAGGCAGTTGCTG...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR-3UTR CCA 90 bp ACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 2 (lower is better)
Translates to: TGHNPRRRTSYGNTGERYSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...ATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR CAA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTaGTCTCCAGGTAATTTCCAGCCTGGGATTTTGAGAAGAGTTGAC +
Preference number: 2 (lower is better)
Translates to: SIYGHSCRNIHGTQL*SPGNFQPGILRRVD
Trigger: GTCAACTCTTCTCAAAATCCCAGGCTGGAAATTACCTGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCCCAGGCATCACATTTaGCCCTGTCCAGAACACCCC +
Preference number: 2 (lower is better)
Translates to: TKSSAETETFSKSIATLHPRHHI*PCPEHP
Trigger: GGGGTGTTCTGGACAGGGTCAAATGTGATGCCTGGG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
3UTR-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACTTCTGGGAGAACATCTaGCCAGCAACTGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TKSSAETETFSKSIATLHFWENI*PATACL
Trigger: CAGGCAGGCAGTTGCTGGGCAGATGTTCTCCCAGAA...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATCCTCTGCAGAAACTaGAACGTTTTCAAAGTCCAT +
Preference number: 2 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLILCRN*NVFKVH
Trigger: ATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGAT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
3UTR CCA 72 bp ACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTaGGCCGCTGGCATCTGCCCACACTGGGCTAGTCTG +
Preference number: 3 (lower is better)
Translates to: THDPSQDSNGAT*AAGICPHWASL
Trigger: CAGACTAGCCCAGTGTGGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 72 bp ACTGGGAATGAGAGAGGCAGTCCACCTGGACCTCCCTaGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTG +
Preference number: 3 (lower is better)
Translates to: TGNERGSPPGPP*GPWEPTREQHL
Trigger: CAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGGTCCAGGTGGACTGCCTCTCTCATTCCCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR TCA 72 bp TTGTCAGCCTGGTTAGCCACAGCACAGTCCGACTGGTaGCATCCACGGCACCAGCAGGGGGTCTGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LSAWLATAQSDW*HPRHQQGVWVR
Trigger: CCTCACCCAGACCCCCTGCTGGTGCCGTGGATGTCACCAGTCGGACTGTGCTGTGGCTAACCAGGCTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 72 bp GTGCCAAACACCTCCCTTGGAGGAGTGCTGCCCCTCTaGCCTTTACTCCCACACGACACTGGCCACAATCCA +
Preference number: 3 (lower is better)
Translates to: VPNTSLGGVLPL*PLLPHDTGHNP
Trigger: TGGATTGTGGCCAGTGTCGTGTGGGAGTAAAGGGCAGAGGGGCAGCACTCCTCCAAGGGAGGTGTTTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR CCA 72 bp ACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTaGGAAGCTGCATCCACCAAAACCCACGATCCATCC +
Preference number: 3 (lower is better)
Translates to: TGAAFHRRRSRP*EAASTKTHDPS
Trigger: GGATGGATCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGGATGCAGAAACAGTTaGTGGACCTCGTCGTGTCGG +
Preference number: 3 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSGCRNS*WTSSCR
Trigger: CCGACACGACGAGGTCCACAAACTGTTTCTGCATCC...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTAGATGCTGTAGTGACTaGGGGGATGCCCATCCTGGG +
Preference number: 3 (lower is better)
Translates to: AGGCCRQECGLLPSLANIRCCSD*GDAHPG
Trigger: CCCAGGATGGGCATCCCCCAAGTCACTACAGCATCT...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 72 bp AGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTaGATCCACCAAAACCCACGATCCATCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: SFSPKTVQALGS*IHQNPRSIPGQ
Trigger: CTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGATTTTCGGGACCCACCTaGGCTATCCTTCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: AQSTRMAGLTRESSEASRFSGPT*AILPLL
Trigger: CAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAA...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR TCA 72 bp GAAGCAGGCCTGCTGGCTAAGACACTGTTCCTGACTTaGACCCCTGTGCCAAACACCTCCCTTGGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: EAGLLAKTLFLT*TPVPNTSLGGV
Trigger: CACTCCTCCAAGGGAGGTGTTTGGCACAGGGGTTCAAGTCAGGAACAGTGTCTTAGCCAGCAGGCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR GCA 72 bp TCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATaGTTATGCCAGAGGGCTCTGGCTCCATTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: SRYSSSLSHLYR*LCQRALAPFFR
Trigger: CCTGAAGAATGGAGCCAGAGCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR CCA 72 bp GCCTTCGTCAGAGCCCTGGGATGCAGAAACAGTTTGTaGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: AFVRALGCRNSL*TSSCRICLPAQ
Trigger: TTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACCCCAGGCATCACATTaGACCCTGTCCAGAACACCC +
Preference number: 3 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEPQASH*TLSRTP
Trigger: GGGTGTTCTGGACAGGGTCAAATGTGATGCCTGGGG...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
3UTR-3UTR CAA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTGGTCTGGGTGAGGACTaGATGCTCATAAAGCCAACG +
Preference number: 3 (lower is better)
Translates to: AGGCCRQECGLLPSLANIGLGED*MLIKPT
Trigger: CGTTGGCTTTATGAGCATCAAGTCCTCACCCAGACC...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 72 bp GCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTaGTTGGGAATCAGATCGACCTGGTTCCAATCCCAG +
Preference number: 3 (lower is better)
Translates to: AICQSRARWGEH*LGIRSTWFQSQ
Trigger: CTGGGATTGGAACCAGGTCGATCTGATTCCCAAGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR GCA 72 bp GGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACTGATGGGAGGACCCAG +
Preference number: 3 (lower is better)
Translates to: GRSSLSRSHSSC*YRWEATDGRTQ
Trigger: CTGGGTCCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR GCA 72 bp GCTGGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCCACTGATGGGAGGACC +
Preference number: 3 (lower is better)
Translates to: AGRSSLSRSHSS*CYRWEATDGRT
Trigger: GGTCCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR CCA 72 bp CAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTaGGCTCCACCTCCTCCATCCATCTATGGACACTCC +
Preference number: 3 (lower is better)
Translates to: QRSKNSQLFLGL*APPPPSIYGHS
Trigger: GGAGTGTCCATAGATGGATGGAGGAGGTGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATGGTTTCTGAAAAACTaGGGAGAGTGGCAATGCACA +
Preference number: 3 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSWFLKN*GEWQCT
Trigger: TGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR TCA 72 bp AGACCTCTCGAAACCCAGCTGCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTTGCTGCTACAGATGGG +
Preference number: 3 (lower is better)
Translates to: RPLETQLLAGLL*VGVIPVAATDG
Trigger: CCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR GCA 72 bp CAACTTTTATTGCTGAAGACCATCGCTGGCGGCTGCTaGAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: QLLLLKTIAGGC*RQECGLLPSLA
Trigger: AGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 72 bp AAACACCAGCTCACAGGCTCAGAGCACGAGAATGGCTaGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: KHQLTGSEHENG*TNQRVLRGFQK
Trigger: TTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGCCTGTGAGCTGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR-3UTR CAA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGATGGTTTCTGAAAAACTaGGGAGAGTGGCAATGCACA +
Preference number: 3 (lower is better)
Translates to: AHKANGSSFSPKTVQALGWFLKN*GEWQCT
Trigger: TGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCA...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTGGATGCAGAAACAGTTaGTGGACCTCGTCGTGTCGG +
Preference number: 3 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLGCRNS*WTSSCR
Trigger: CCGACACGACGAGGTCCACAAACTGTTTCTGCATCC...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCTCTGCAGCATTTCCTTaGTGTAGCCTCCTTTGGTCC +
Preference number: 3 (lower is better)
Translates to: NLFGTHLGYPSSAELPLASAAFP*CSLLWS
Trigger: GGACCAAAGGAGGCTACACAAAGGAAATGCTGCAGA...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR GCA 72 bp ACACAACTTTTATTGCTGAAGACCATCGCTGGCGGCTaGTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: TQLLLLKTIAGG*CRQECGLLPSL
Trigger: AAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 72 bp AACATCTTACGGGAACACTGGAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTCTCGAAACCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NILREHWREIYR*EGHSDLSKPSC
Trigger: GCAGCTGGGTTTCGAGAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR CAA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAATTCCAGCCTGGGATTTaGAGAAGAGTTGACAGCTCT +
Preference number: 3 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEFQPGI*RRVDSS
Trigger: AGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGAA...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR-3UTR CAA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACTCGTGTCGGATTTGCTaGCCAGCCCAAACAAGGATT +
Preference number: 3 (lower is better)
Translates to: REQHLFLNAFVRALGCRNSCRIC*PAQTRI
Trigger: AATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGA...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 72 bp TGCAGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTaGTTGCCAGCCCAAACAAGGATTTGCTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: CRNSLWTSSCRI*LPAQTRICFPE
Trigger: CTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR GCA 72 bp CATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATaGAGAAACAGTTTGTGGACCTCGTCGTGTCGGATT +
Preference number: 3 (lower is better)
Translates to: HLFLNAFVRALG*RNSLWTSSCRI
Trigger: AATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 72 bp AACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTaGGATGCAGAAACAGTTTGTGGACCTCGTCGTGTC +
Preference number: 3 (lower is better)
Translates to: NSICFLTPSSEP*DAETVCGPRRV
Trigger: GACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CCA 72 bp TCTCTGAGTAGGAGTCATTCCAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGGACCCAGAGTAGATTT +
Preference number: 3 (lower is better)
Translates to: SLSRSHSSCCYR*EATDGRTQSRF
Trigger: AAATCTACTCTGGGTCCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR CCA 72 bp CCACAATCCAAGAAGAAGAACATCTTACGGGAACACTaGAGAGAGATATACCGCTGGGAAGGGCATTCAGAC +
Preference number: 3 (lower is better)
Translates to: PQSKKKNILREH*REIYRWEGHSD
Trigger: GTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR CAA 90 bp CCACAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 3 (lower is better)
Translates to: PQSKKKNILREHWREIYRILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...GCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
3UTR-3UTR CAA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCACAGACAGCTGGGATaGACCCCAGGCATCACATTT +
Preference number: 3 (lower is better)
Translates to: TKSSAETETFSKSIATLHHRQLG*TPGITF
Trigger: AAATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCCAAGCAGGGTGGATGTaGGCGGACAGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPQAGWM*ADRVRG
Trigger: GCCCCTGACCCTGTCCGCTCACATCCACCCTGCTTG...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCCCTGGCAGGAGTCTCTaGCCCCACGAAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCPGRSL*PHEGPQ
Trigger: CTGGGGACCTTCGTGGGGGCAGAGACTCCTGCCAGG...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCCCCCGCTGTCTCCCTaGCAGGAGTCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVPPLSP*QESLPP
Trigger: TGGGGGCAGAGACTCCTGCCAGGGAGACAGCGGGGG...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGCCCTCCCGCCAGGTaGACTTGGGCAGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCGPPAR*TWAGSY
Trigger: GTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR TCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGGGCAGTCTTTCCCTTaGGCGGCCATGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVGQSFP*AAMACL
Trigger: CAGGCAGGCCATGGCCGCTCAAGGGAAAGACTGCCC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSASGNW*RLLVPA
Trigger: CGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGC...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHASGNW*RLLVPA
Trigger: CGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGC...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWAAASGN*CRLLVP
Trigger: GGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGC...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCCCCCGCTGTCTCCCTaGCAGGAGTCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCPPLSP*QESLPP
Trigger: TGGGGGCAGAGACTCCTGCCAGGGAGACAGCGGGGG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGATCCCAGGACAGCAATaGCGCCACCTGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVIPGQQ*RHLGRW
Trigger: CCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGAT...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTCCTCCCTGGGGCCCCTaGGAGCCTACGCGGGAACAG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAPPWGP*EPTREQ
Trigger: CTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGG...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTGGCCCTCCCGCCAGGTaGACTTGGGCAGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RLQGKQFASLEPGGESTAGPPAR*TWAGSY
Trigger: GTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCC...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCATACGACATTTCCCATaGATCCCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPIRHFP*IPWGSW
Trigger: CCAAGACCCCCAGGGGATTCATGGGAAATGTCGTAT...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAGGGCAGTCTTTCCCTTaGGCGGCCATGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGGQSFP*AAMACL
Trigger: CAGGCAGGCCATGGCCGCTCAAGGGAAAGACTGCCC...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCPMSGS*FWPSRQ
Trigger: CTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR GCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGACAGCAGCCGGTGCTGTaGAGAGCAGCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGQQPVL*RAAGQL
Trigger: CAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTG...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACTTCACAGCAGCCGGTaGTGTGCAGAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRALHSSR*CAEQQA
Trigger: GGCCTGCTGCTCTGCACAGCACCGGCTGCTGTGAAG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGTGGGAGTCCGATGGTaGCCGGTGGCCATTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSVGVRW*PVAISP
Trigger: TGGGCTAATGGCCACCGGGCACCATCGGACTCCCAC...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCGGGCAGGCTCGTACCTaGGCTCTCCCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGGQART*ALPGGP
Trigger: AGGGCCACCAGGGAGAGCCCAGGTACGAGCCTGCCC...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGACGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRRSARS*PSVRSG
Trigger: CCCACTGCGGACTGAGGGCCATGACCGGGCGGATCG...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACTGCCAGAACTGGACTaGGCTCTCCCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSLPELD*ALPGGP
Trigger: AGGGCCACCAGGGAGAGCCCAGTCCAGTTCTGGCAG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528626.5
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCACCTCCCTGGGGCCCCTaGGAGCCTACGCGGGAACAG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPPPWGP*EPTREQ
Trigger: CTGTTCCCGCGTAGGCTCCCAGGGGCCCCAGGGAGG...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCGCTGCCTGGAAGGCATaGGACCATGTTAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPAAWKA*DHVSFL
Trigger: GAGAAAGCTAACATGGTCCCATGCCTTCCAGGCAGC...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGAAGACCATCGCTaGCGGCTGCTGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWAAEDHR*RLLQTG
Trigger: TCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGC...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACCTCTCCATGGTCTCTaGGGGGAAGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSPLHGL*GEESSR
Trigger: CCTGGAGGACTCTTCCCCTCAGAGACCATGGAGAGG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCCTCTCCATGGTCTCTaGGGGGAAGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHPLHGL*GEESSR
Trigger: CCTGGAGGACTCTTCCCCTCAGAGACCATGGAGAGG...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGAAACCACCAGGGCAATaGGGAGGAGCACGCACCCGA +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVKPPGQ*GGARTR
Trigger: TCGGGTGCGTGCTCCTCCTCATTGCCCTGGTGGTTT...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR TCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGTCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVSAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACCCACTGGGCGTCAATaGGCGTGCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAPTGRQ*ACLHRC
Trigger: ACATCTGTGGAGGCACGCTCATTGACGCCCAGTGGG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCAAGCAGGGTGGATGTaGGCGGACAGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIQAGWM*ADRVRG
Trigger: GCCCCTGACCCTGTCCGCTCACATCCACCCTGCTTG...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGTGGGCTAGGCTGGGCTaGTCTGCTTGGATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVWARLG*SAWILP
Trigger: AGGCAGGATCCAAGCAGATCAGCCCAGCCTAGCCCA...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: WTNQRVLRGFQKSRYSSSPMSGS*FWPSRQ
Trigger: CTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGG...GGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCSQRTA*LGQLSL
Trigger: GAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCT +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVATGAG*WCPRTP
Trigger: AGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREASGNW*RLLVPA
Trigger: CGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCCCAGCTGGTGACACCTaGCAGGTACCAGCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCPAGDT*QVPAVV
Trigger: AACAACCGCTGGTACCTGGCAGGTGTCACCAGCTGG...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCAGCAGCCGGTGCTGTaGAGAGCAGCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIQQPVL*RAAGQL
Trigger: CAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTG...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAACCATCGCTGGCGGCTaGTGCAGACAGGAATGTGGC +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRATIAGG*CRQECG
Trigger: GCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGT...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGGAGATGCATTCCCGTaGCTGTCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWAGDAFP*LSLSMV
Trigger: GACCATGGAGAGGGACAGCCACGGGAATGCATCTCC...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGATCACCGAGGCTGACCTaGCGGATGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGSPRLT*RMMTCR
Trigger: CCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGA...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTTACCTGGGCTCTCCCTaGTGGCCCTGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCYLGSP*WPWLLV
Trigger: CACCAGCAACCAGGGCCACCAGGGAGAGCCCAGGTA...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGGGCAGGCTCGTACCTaGGCTCTCCCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPGQART*ALPGGP
Trigger: AGGGCCACCAGGGAGAGCCCAGGTACGAGCCTGCCC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCACGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPRSARS*PSVRSG
Trigger: CCCACTGCGGACTGAGGGCCATGACCGGGCGGATCG...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGCAGTGAGCACCCACTaGGCGTCAATGAGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAAVSTH*ASMSVP
Trigger: AGGCACGCTCATTGACGCCCAGTGGGTGCTCACTGC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSTGAGC*CPRTPS
Trigger: GGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGT...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCAASGN*CRLLVP
Trigger: GGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACTCTTCCTTGGGCTCTaGGCTCCACCTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRALFLGL*APPPPS
Trigger: GGATGGAGGAGGTGGAGCCCAGAGCCCAAGGAAGAG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCGATGCTGTAGTGACTTaGGGGATGCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCDAVVT*GMPILG
Trigger: CCCCAGGATGGGCATCCCCCAAGTCACTACAGCATC...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTCCAGCCCCCACCAAATaGGGCGGGGAAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAPAPTK*GGEAGW
Trigger: CCAACCGGCTTCCCCGCCCCATTTGGTGGGGGCTGG...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGGAGCACGCACCCGATaGGCGGTAGCTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDGARTR*AVAASG
Trigger: GCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCC...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAATCCAGGGTCCCCACCTaGGGAAGTTCCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESRVPT*GSSQPA
Trigger: AGCAGGCTGGGAACTTCCTCAGGTGGGGACCCTGGA...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTGCACAGTCCGACTGGTaGCATCCACGGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAAQSDW*HPRHQQ
Trigger: CTGCTGGTGCCGTGGATGTCACCAGTCGGACTGTGC...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCWRMMT*RMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCA...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACTCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHSQRTA*LGQLSL
Trigger: GAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRARHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVRHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRGAGCW*PRTPSS
Trigger: GCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACC...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTACCAGCGGTTGTTCTaGTCACAGACAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCYQRLF*SQTRGP
Trigger: GGGGCCTCTTGTCTGTGAGCAGAACAACCGCTGGTA...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTGGGCCGCTGGCATCTaGCCACACTGGGCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAWAAGI*PHWASL
Trigger: CAGACTAGCCCAGTGTGGGCAGATGCCAGCGGCCCA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSCRMRT*KVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAATCACCGAGGCTGACCTaGCGGATGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESPRLT*RMMTCR
Trigger: CCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGA...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTCACCGAGGCTGACCTaGCGGATGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASPRLT*RMMTCR
Trigger: CCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCAGGAGATGATCGGATaGGTACAGCCCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHQEMIG*VQPPLV
Trigger: CACCAGTGGGGGCTGTACCCATCCGATCATCTCCTG...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAATCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESPWWP*LLVLTW
Trigger: CCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGA...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSSEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACGTGCCTCCACAGATGTaGGTGGTGCCGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHVPPQM*VVPKCR
Trigger: TCTGCACTTCGGCACCACCCACATCTGTGGAGGCAC...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAAGGTCTGTCCATGCATaGGGAGGCAAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSRSVHA*GGKQGG
Trigger: TCCACCCTGCTTGCCTCCCCATGCATGGACAGACCT...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGACCTCTGCCTACAACCTaGGTGCTCCTCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGPLPTT*VLLQGP
Trigger: GGGACCCTGGAGGAGCACCCAGGTTGTAGGCAGAGG...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTTGGCCCTGCCAGAACTaGACTGGGCTCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIWPCQN*TGLSLV
Trigger: CACCAGGGAGAGCCCAGTCCAGTTCTGGCAGGGCCA...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGGGGGATGCCCATCCTaGGGACTTTGTCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVGGCPS*GLCPVS
Trigger: AGAGACTGGACAAAGTCCCCAGGATGGGCATCCCCC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCTGCAGAAACAGTTTGTaGACCTCGTCGTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPCRNSL*TSSCRI
Trigger: AATCCGACACGACGAGGTCCACAAACTGTTTCTGCA...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTTCAGCAGGGCTGCCTaGAAGGCATGGGACCATGTT +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCFSRAA*KAWDHV
Trigger: AACATGGTCCCATGCCTTCCAGGCAGCCCTGCTGAA...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGGAGCACGCACCCGATaGGCGGTAGCTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCGARTR*AVAASG
Trigger: GCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR TCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAGCACAGTCCGACTGGTaGCATCCACGGCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEAQSDW*HPRHQQ
Trigger: CTGCTGGTGCCGTGGATGTCACCAGTCGGACTGTGC...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCCGCCCCAGCAGCTTGTaGCCAAATGAGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCRPSSL*PNEYSE
Trigger: TTCACTGTACTCATTTGGTCACAAGCTGCTGGGGCG...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCCGCCCCAGCAGCTTGTaGCCAAATGAGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWARPSSL*PNEYSE
Trigger: TTCACTGTACTCATTTGGTCACAAGCTGCTGGGGCG...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCTGGGGGTCTTGGGCTaGTTGATGCCAGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCLGVLG*LMPAVK
Trigger: CTTGACAGCTGGCATCAATCAGCCCAAGACCCCCAG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEPMSGS*FWPSRQ
Trigger: CTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGG...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAGQLSL*SLYLIP
Trigger: AGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTTCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCSQRTA*LGQLSL
Trigger: GAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRALSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTCTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDALAKAT*YPRPAP
Trigger: GGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAG...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTTGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCWVVPK*RLTCQG
Trigger: GCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCA...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEGAGCW*PRTPSS
Trigger: GCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACC...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCT +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGATGAG*WCPRTP
Trigger: AGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGC...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCASGNW*RLLVPA
Trigger: CGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: WTNQRVLRGFQKSRYSSSLGNGG*LRQLVQ
Trigger: CTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAG...GGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTTCGATGAGATTGACCTaGACCTCCCGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCSMRLT*TSRRKG
Trigger: CCCCTTCCTCCGGGAGGTGCAGGTCAATCTCATCGA...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACCTGGCAGGAGTCTCTaGCCCCACGAAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEPGRSL*PHEGPQ
Trigger: CTGGGGACCTTCGTGGGGGCAGAGACTCCTGCCAGG...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCCTGGCAGGAGTCTCTaGCCCCACGAAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNPGRSL*PHEGPQ
Trigger: CTGGGGACCTTCGTGGGGGCAGAGACTCCTGCCAGG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGGTGGGAGTCCGATGGTaGCCGGTGGCCATTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKVGVRW*PVAISP
Trigger: TGGGCTAATGGCCACCGGGCACCATCGGACTCCCAC...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCATGGGCCGCTGGCATCTaGCCACACTGGGCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPWAAGI*PHWASL
Trigger: CAGACTAGCCCAGTGTGGGCAGATGCCAGCGGCCCA...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCAGGCCCTGGGAAGCTaGATCCACCAAAACCCACGA +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCQALGS*IHQNPR
Trigger: TCGTGGGTTTTGGTGGATGCAGCTTCCCAGGGCCTG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACCTAGGGGCTCCAGATaGTGTAGTGACTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAPRGSR*CSDLGD
Trigger: ATCCCCCAAGTCACTACAGCATCTGGAGCCCCTAGG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTATCGCTGGCGGCTGCTaGAGACAGGAATGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIIAGGC*RQECGL
Trigger: GAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGAT...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGACAAGTGCGAGGGCTaGAGAGGGTGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLDKCEG*RGCWGW
Trigger: CCAGCCCCAGCACCCTCTGCAGCCCTCGCACTTGTC...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATTCACCGAGGCTGACCTaGCGGATGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDSPRLT*RMMTCR
Trigger: CCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGA...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCATTGCTGGTGCTGACCTaGCAGGAGATGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRALLVLT*QEMIGW
Trigger: CCATCCGATCATCTCCTGCCAGGTCAGCACCAGCAA...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGTTGCTGGTGCTGACCTaGCAGGAGATGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVLLVLT*QEMIGW
Trigger: CCATCCGATCATCTCCTGCCAGGTCAGCACCAGCAA...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKSPWWP*LLVLTW
Trigger: CCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGA...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDSPWWP*LLVLTW
Trigger: CCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGA...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATTACCTGGGCTCTCCCTaGTGGCCCTGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDYLGSP*WPWLLV
Trigger: CACCAGCAACCAGGGCCACCAGGGAGAGCCCAGGTA...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGTACCTGATCCCTGTGTaGCCCTGCCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVYLIPV*PCQNWK
Trigger: CTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCSEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCCGCAGTGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHPQWEH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGG...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGCCCTCAGTCCGCAGTaGGAACACTGGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVALSPQ*EHWREI
Trigger: TATCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCTCCACAGATGTGGGTaGTGCCGAAGTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVLHRCG*CRSADS
Trigger: TGAGTCTGCACTTCGGCACCACCCACATCTGTGGAG...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGTGCCTCCACAGATGTaGGTGGTGCCGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCVPPQM*VVPKCR
Trigger: TCTGCACTTCGGCACCACCCACATCTGTGGAGGCAC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGCAGTGAGCACCCACTaGGCGTCAATGAGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREAVSTH*ASMSVP
Trigger: AGGCACGCTCATTGACGCCCAGTGGGTGCTCACTGC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTGCAGTGAGCACCCACTaGGCGTCAATGAGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAAVSTH*ASMSVP
Trigger: AGGCACGCTCATTGACGCCCAGTGGGTGCTCACTGC...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCGCAGTGAGCACCCACTaGGCGTCAATGAGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGAVSTH*ASMSVP
Trigger: AGGCACGCTCATTGACGCCCAGTGGGTGCTCACTGC...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGTGAGC*CPRTPS
Trigger: GGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGT...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAAASGN*CRLLVP
Trigger: GGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGC...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATTCAGCAGGGCTGCCTaGAAGGCATGGGACCATGTT +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSFSRAA*KAWDHV
Trigger: AACATGGTCCCATGCCTTCCAGGCAGCCCTGCTGAA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCTGCAGACAGGAATGTaGCCTCCTTCCCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVLQTGM*PPSQSC
Trigger: GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAG...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGGGAGCACGCACCCGATaGGCGGTAGCTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKGARTR*AVAASG
Trigger: GCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCC...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAATCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAESAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCTCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NLFGTHLGYPSSAELPLASAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp AGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCTCGAAACCCAGCTGCTGGTCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: REIYRWEGHSDLSKPSCWSAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...CCAGCAGCTGGGTTTCGAGAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATCCCACTGGGCGTCAATaGGCGTGCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDPTGRQ*ACLHRC
Trigger: ACATCTGTGGAGGCACGCTCATTGACGCCCAGTGGG...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGGTCTTGGGCTGATTaGTGCCAGCTGTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCGSWAD*CQLSRL
Trigger: AAGCCTTGACAGCTGGCATCAATCAGCCCAAGACCC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCCTATCCTTCCTCTGCTaGGCTTCCCCTAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGLSFLC*ASPSLP
Trigger: TGGCAGGCTAGGGGAAGCTCAGCAGAGGAAGGATAG...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCATGTTCTTGCTGGAGATaGATTCCCGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRACSCWR*IPVAVP
Trigger: AGGGACAGCCACGGGAATGCATCTCCAGCAAGAACA...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: RLQGKQFASLEPGGESTARHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNLAKAT*YPRPAP
Trigger: GGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTCTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCLAKAT*YPRPAP
Trigger: GGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAG...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAWVVPK*RLTCQG
Trigger: GCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNGAGCW*PRTPSS
Trigger: GCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACC...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGCTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKLGNGG*LRQLVQ
Trigger: CTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAG...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCTAAAGGTCTGTCCATaGATGGGGAGGCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCLKVCP*MGRQAG
Trigger: CCCTGCTTGCCTCCCCATGCATGGACAGACCTTTAG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCAGCTGGTGACACCTaGCAGGTACCAGCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIPAGDT*QVPAVV
Trigger: AACAACCGCTGGTACCTGGCAGGTGTCACCAGCTGG...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCATCGTCGTGTCGGATTTaGTTGCCAGCCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRASSCRI*LPAQTR
Trigger: CCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGA...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAACCATCGCTGGCGGCTaGTGCAGACAGGAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPTIAGG*CRQECG
Trigger: GCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGT...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCAGTTGCTCCCGCCTATaGCACCATAGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGSCSRL*HHSSLL
Trigger: GAGCAGGGAGCTATGGTGGCATAGGCGGGAGCAACT...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCGGAGATGCATTCCCGTaGCTGTCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGGDAFP*LSLSMV
Trigger: GACCATGGAGAGGGACAGCCACGGGAATGCATCTCC...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTGGAGATGCATTCCCGTaGCTGTCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAGDAFP*LSLSMV
Trigger: GACCATGGAGAGGGACAGCCACGGGAATGCATCTCC...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTCAGGAGATGATCGGATaGGTACAGCCCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAQEMIG*VQPPLV
Trigger: CACCAGTGGGGGCTGTACCCATCCGATCATCTCCTG...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREESGSCF*PSRQVN
Trigger: GTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCT...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACTGGCCCTGCCAGAACTaGAAGAGGATGATGAGCGAA +
Preference number: 4 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHWPCQN*KRMMSE
Trigger: TTCGCTCATCATCCTCTTCCAGTTCTGGCAGGGCCA...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQGKQFASLEPGGESTASEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGATTGGCAAAATCCCTGTaGGCAACCTCGGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGLAKSL*ATSVVR
Trigger: CCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAA...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGTGCCTCCACAGATGTaGGTGGTGCCGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREVPPQM*VVPKCR
Trigger: TCTGCACTTCGGCACCACCCACATCTGTGGAGGCAC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGGTCTGTCCATGCATaGGGAGGCAAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGRSVHA*GGKQGG
Trigger: TCCACCCTGCTTGCCTCCCCATGCATGGACAGACCT...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCAGCACACATCATCCTTaGGGTAAGGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPSTHHP*GKVTVI
Trigger: TATGACAGTTACCTTACCCCAAGGATGATGTGTGCT...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACGAGGTGGGAGTCCGATaGTGCCCGGTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNEVGVR*CPVAIS
Trigger: GCTAATGGCCACCGGGCACCATCGGACTCCCACCTC...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGCAGACAGTGGAGGTaGGAGTCCGATGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNSRQWR*ESDGAR
Trigger: CCGGGCACCATCGGACTCCCACCTCCACTGTCTGCT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTAGCAATGGCGCCACCTaGGCCGCTGGCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSNGAT*AAGICP
Trigger: TGGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTATCCCAGGACAGCAATaGCGCCACCTGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLIPGQQ*RHLGRW
Trigger: CCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGAT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTAGACGGTCCAGGCCCTaGGAAGCTGCATCCACCAAA +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEARRSRP*EAASTK
Trigger: TTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCT...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCCCTTCGTCAGAGCCCTaGGATGCAGAAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCPSSEP*DAETVC
Trigger: ACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGG...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATCCAGCTTGCTCTTCTaGGGCAGTCTTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSSSLLF*GSLSLE
Trigger: CTCAAGGGAAAGACTGCCCCAGAAGAGCAAGCTGGA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp GCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTaGCTAACATTCCCCAGTGTACCCAGCCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AAADRNVASFPV*LTFPSVPSPIS
Trigger: GCTGATGGGGCTGGGTACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCCCTCTCCATGGTCTCTaGGGGGAAGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASPLHGL*GEESSR
Trigger: CCTGGAGGACTCTTCCCCTCAGAGACCATGGAGAGG...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTGGCCCTCCCGCCAGGTaGACTTGGGCAGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIGPPAR*TWAGSY
Trigger: GTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCC...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAAAACCACCAGGGCAATaGGGAGGAGCACGCACCCGA +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLKPPGQ*GGARTR
Trigger: TCGGGTGCGTGCTCCTCCTCATTGCCCTGGTGGTTT...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAATCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREESAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGT +
Preference number: 4 (lower is better)
Translates to: NLFGTHLGYPSSAELPLAAWTAA*GRCHSR
Trigger: ACGACTATGACATCGCCCTCATGCGGCTGTCCAAGC...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAAGCTGGGAAAGGCCATaGAGAGCGGATTCCCATGCA +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESWERP*RADSHA
Trigger: TGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCT...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACTGGTTAGGATTTTCTaGATCGCACCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSLVRIF*IAPRSP
Trigger: TGGAGAGCGAGGTGCGATTCAGAAAATCCTAACCAG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAACTGGGGGTCTTGGGCTaGTTGATGCCAGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAELGVLG*LMPAVK
Trigger: CTTGACAGCTGGCATCAATCAGCCCAAGACCCCCAG...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACCGGGCCCAAGGAAGGTaGGGGGAGCAGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHRAQGR*GEQDWQ
Trigger: CTGCCAGTCCTGCTCCCCTCACCTTCCTTGGGCCCG...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACACAACTTTTATTGCTaGAGACCATCGCTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSHNFYC*RPSLAA
Trigger: AGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTGTG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCGGCCCGGATATGAGTTaGCAGATGCTGACAAGTGCG +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGGPDMS*QMLTSA
Trigger: CGCACTTGTCAGCATCTGTCAACTCATATCCGGGCC...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAATCCCTGTGTGGCCCTaGCAGAACTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRIPVWP*QNWKRM
Trigger: CATCCTCTTCCAGTTCTGGCAGGGCCACACAGGGAT...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREGQLSL*SLYLIP
Trigger: AGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCSHSSC*YRWEAT
Trigger: AGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACT...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGACTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRLSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSKCRLT*QGHLLS
Trigger: GGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTT...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCACAGATGTGGGTGGTaGCGAAGTGCAGACTCACTT +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCHRCGW*RSADSL
Trigger: AAGTGAGTCTGCACTTCGGCACCACCCACATCTGTG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKGAGCW*PRTPSS
Trigger: GCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACC...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCT +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCATGAG*WCPRTP
Trigger: AGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTCTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCLGNGG*LRQLVQ
Trigger: CTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAG...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTCTAAAGGTCTGTCCATaGATGGGGAGGCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEALKVCP*MGRQAG
Trigger: CCCTGCTTGCCTCCCCATGCATGGACAGACCTTTAG...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGTCCCAGCCTGCTGGGTaGAGTGTCCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKSQPAG*SVLLQG
Trigger: TCCCTGCAGCAGGACACTGCACCCAGCAGGCTGGGA...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGATCGCTGGCGGCTGCTaGAGACAGGAATGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQIAGGC*RQECGL
Trigger: GAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGAT...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTACAGATGCTGACAAGTaGGAGGGCTGCAGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDATDADK*EGCRGC
Trigger: GCACCCTCTGCAGCCCTCGCACTTGTCAGCATCTGT...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAAGGTACACTCTGGTTaGGGAGGTTGTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRKVHSG*GGCHRG
Trigger: GCCTCGGTGACAACCTCCCCAACCAGAGTGTACCTT...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGGTACAGCCCCCACTaGTGTTGCTCTAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCGYSPH*CCSNKV
Trigger: TACCTTGTTAGAGCAACACCAGTGGGGGCTGTACCC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAGGGTACAGCCCCCACTaGTGTTGCTCTAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGGYSPH*CCSNKV
Trigger: TACCTTGTTAGAGCAACACCAGTGGGGGCTGTACCC...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAACAGGAGATGATCGGATaGGTACAGCCCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEQEMIG*VQPPLV
Trigger: CACCAGTGGGGGCTGTACCCATCCGATCATCTCCTG...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGATTGCTGGTGCTGACCTaGCAGGAGATGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGLLVLT*QEMIGW
Trigger: CCATCCGATCATCTCCTGCCAGGTCAGCACCAGCAA...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSPWWP*LLVLTW
Trigger: CCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGA...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGGGGCAGGCTCGTACCTaGGCTCTCCCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLGQART*ALPGGP
Trigger: AGGGCCACCAGGGAGAGCCCAGGTACGAGCCTGCCC...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSGSCF*PSRQVN
Trigger: GTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGATACCTGATCCCTGTGTaGCCCTGCCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGYLIPV*PCQNWK
Trigger: CTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTGCCCTCAGTCCGCAGTaGGAACACTGGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANIALSPQ*EHWREI
Trigger: TATCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGC...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLRSARS*PSVRSG
Trigger: CCCACTGCGGACTGAGGGCCATGACCGGGCGGATCG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACCGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHRSARS*PSVRSG
Trigger: CCCACTGCGGACTGAGGGCCATGACCGGGCGGATCG...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTCTCCACAGATGTGGGTaGTGCCGAAGTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: RLQGKQFASLEPGGESTALHRCG*CRSADS
Trigger: TGAGTCTGCACTTCGGCACCACCCACATCTGTGGAG...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGAGGTCTGTCCATGCATaGGGAGGCAAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKRSVHA*GGKQGG
Trigger: TCCACCCTGCTTGCCTCCCCATGCATGGACAGACCT...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGAGCAGCAGGCCAGCTaGTTAGGATTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVEQQAS*LGFSES
Trigger: CGATTCAGAAAATCCTAACCAGCTGGCCTGCTGCTC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCATCCGATGGTGCCCGGTaGCCATTAGCCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPSDGAR*PLAQMM
Trigger: CATCATCTGGGCTAATGGCCACCGGGCACCATCGGA...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTAGCAGACAGTGGAGGTaGGAGTCCGATGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSRQWR*ESDGAR
Trigger: CCGGGCACCATCGGACTCCCACCTCCACTGTCTGCT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCTCTTCCTTGGGCTCTaGGCTCCACCTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNLFLGL*APPPPS
Trigger: GGATGGAGGAGGTGGAGCCCAGAGCCCAAGGAAGAG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCAGCTGTCAAGGCTTCTaGACTTTTTGGAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPSCQGF*TFWRIF
Trigger: AAAGATTCTCCAAAAAGTCCAGAAGCCTTGACAGCT...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCTGCCTGGAAGGCATaGGACCATGTTAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCAAWKA*DHVSFL
Trigger: GAGAAAGCTAACATGGTCCCATGCCTTCCAGGCAGC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCGCTGAAGACCATCGCTaGCGGCTGCTGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASAEDHR*RLLQTG
Trigger: TCCTGTCTGCAGCAGCCGCCAGCGATGGTCTTCAGC...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp AACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGTTaGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NAFVRALGCRNS*WTSSCRICLPA
Trigger: GGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGACGAAGGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCTCCTCCAGGCTTAGCTaGTGTCGAGGAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGSSRLS*CRGEDP
Trigger: TGGATCTTCTCCTCGACATCAGCTAAGCCTGGAGGA...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGGGAGCACGCACCCGATaGGCGGTAGCTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLGARTR*AVAASG
Trigger: GCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCC...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGT +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCAWTAA*GRCHSR
Trigger: ACGACTATGACATCGCCCTCATGCGGCTGTCCAAGC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCAAGCAGGGTGGATGTaGGCGGACAGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLQAGWM*ADRVRG
Trigger: GCCCCTGACCCTGTCCGCTCACATCCACCCTGCTTG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTAGCAGGGGGTCTGGGTaGGGACTTGATGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: AGGCCRQECGLLPSLANISRGSG*GLDAHK
Trigger: TTTATGAGCATCAAGTCCTCACCCAGACCCCCTGCT...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTTGGGCTAGGCTGGGCTaGTCTGCTTGGATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLWARLG*SAWILP
Trigger: AGGCAGGATCCAAGCAGATCAGCCCAGCCTAGCCCA...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDWRMMT*RMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCA...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTAGCCCCCACTGGTGTTaGTCTAACAAGGTACACTCT +
Preference number: 4 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCSPHWC*SNKVHS
Trigger: AGAGTGTACCTTGTTAGAGCAACACCAGTGGGGGCT...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAATCCCTGTGTGGCCCTaGCAGAACTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEIPVWP*QNWKRM
Trigger: CATCCTCTTCCAGTTCTGGCAGGGCCACACAGGGAT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR GCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDGQLSL*SLYLIP
Trigger: AGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCC...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAACTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAELSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLWVVPK*RLTCQG
Trigger: GCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACCAGCTGGTGACACCTaGCAGGTACCAGCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEPAGDT*QVPAVV
Trigger: AACAACCGCTGGTACCTGGCAGGTGTCACCAGCTGG...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACTGGGTGCAGTGTCCTaGTGCAGGGATCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREELGAVS*CRDLTS
Trigger: GGAGGTAAGATCCCTGCAGCAGGACACTGCACCCAG...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGGCACGTTGATGATTTaGAGGAACAGGGCCAACTTA +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAGTLMI*RNRANL
Trigger: TAAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTTGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCCRMRT*KVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCA...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGATGGCCCTGCCAGAACTaGAAGAGGATGATGAGCGAA +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGWPCQN*KRMMSE
Trigger: TTCGCTCATCATCCTCTTCCAGTTCTGGCAGGGCCA...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWARLRSC*QNPCGQ
Trigger: TTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCT...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGCCGCAGTGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKPQWEH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGG...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCCAGGTTTGTTTCTCTaGCCACAGCCTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQPGLFL*PQPVPQ
Trigger: CTGGGGCACAGGCTGTGGCCAGAGAAACAAACCTGG...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCCAGGTTTGTTTCTCTaGCCACAGCCTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNPGLFL*PQPVPQ
Trigger: CTGGGGCACAGGCTGTGGCCAGAGAAACAAACCTGG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTTCCGATGGTGCCCGGTaGCCATTAGCCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCSDGAR*PLAQMM
Trigger: CATCATCTGGGCTAATGGCCACCGGGCACCATCGGA...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACAGCAATGGCGCCACCTaGGCCGCTGGCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHSNGAT*AAGICP
Trigger: TGGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCT...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGATGCTGTAGTGACTTaGGGGATGCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCDAVVT*GMPILG
Trigger: CCCCAGGATGGGCATCCCCCAAGTCACTACAGCATC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCACTGCAGACAGGAATGTaGCCTCCTTCCCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPLQTGM*PPSQSC
Trigger: GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAG...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp GTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTaGGGCTCTGGGCTCCACCTCCTCCATCCATCTATG +
Preference number: 4 (lower is better)
Translates to: VRVREARIPSSS*GSGLHLLHPSM
Trigger: CATAGATGGATGGAGGAGGTGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp ATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTaGGGAATCAGATCGACCTGGTTCCAATCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ICQSRARWGEHC*GIRSTWFQSQS
Trigger: GCTCTGGGATTGGAACCAGGTCGATCTGATTCCCAAGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAATCCTCCAGGCTTAGCTaGTGTCGAGGAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAESSRLS*CRGEDP
Trigger: TGGATCTTCTCCTCGACATCAGCTAAGCCTGGAGGA...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGTCCTCCAGGCTTAGCTaGTGTCGAGGAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKSSRLS*CRGEDP
Trigger: TGGATCTTCTCCTCGACATCAGCTAAGCCTGGAGGA...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: WTNQRVLRGFQKSRYSSSLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...GGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGT +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLAWTAA*GRCHSR
Trigger: ACGACTATGACATCGCCCTCATGCGGCTGTCCAAGC...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGCCCAGGCATCACATTTaGCCCTGTCCAGAACACCCC +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKPRHHI*PCPEHP
Trigger: GGGGTGTTCTGGACAGGGTCAAATGTGATGCCTGGG...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp AGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCTCGAAACCCAGCTGCTGGACACTGTTCCTGACTTaGACCCCTGTGCCAAACACC +
Preference number: 4 (lower is better)
Translates to: REIYRWEGHSDLSKPSCWTLFLT*TPVPNT
Trigger: GGTGTTTGGCACAGGGGTTCAAGTCAGGAACAGTGT...CCAGCAGCTGGGTTTCGAGAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQWRMMT*RMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCA...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAGCCCCCACTGGTGTTaGTCTAACAAGGTACACTCT +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRSPHWC*SNKVHS
Trigger: AGAGTGTACCTTGTTAGAGCAACACCAGTGGGGGCT...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAATCCCTGTGTGGCCCTaGCAGAACTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEIPVWP*QNWKRM
Trigger: CATCCTCTTCCAGTTCTGGCAGGGCCACACAGGGAT...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKRHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: HLTGTLERDIPLGRAFRPRHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...AGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRERSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTCACAGATGTGGGTGGTaGCGAAGTGCAGACTCACTT +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAHRCGW*RSADSL
Trigger: AAGTGAGTCTGCACTTCGGCACCACCCACATCTGTG...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTTCGATGAGATTGACCTaGACCTCCCGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLSMRLT*TSRRKG
Trigger: CCCCTTCCTCCGGGAGGTGCAGGTCAATCTCATCGA...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTTGCCCAGCAACTGCCTaGCTGGCCTGTAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHICPATA*LACRST
Trigger: GGTGGACCTACAGGCCAGGCAGGCAGTTGCTGGGCA...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTTGCCTACAACCTGGGTaGTCCTCCAGGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHICLQPG*SSRVPT
Trigger: GGTGGGGACCCTGGAGGAGCACCCAGGTTGTAGGCA...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCATCGTCGTGTCGGATTTaGTTGCCAGCCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPSSCRI*LPAQTR
Trigger: CCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGA...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ACTCCCACACGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACACGGAGTGCTGCCCCTCTaGCCTTTACTCCCACACGAC +
Preference number: 4 (lower is better)
Translates to: TPTRHWPQSKKKNILREHGVLPL*PLLPHD
Trigger: GTCGTGTGGGAGTAAAGGGCAGAGGGGCAGCACTCC...GTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAATCCATCTTGGTCCCTaGCTTCTCAGGCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEIHLGP*LLRHVG
Trigger: CCCTACATGCCTGAGAAGCCAGGGACCAAGATGGAT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTATCCATCTTGGTCCCTaGCTTCTCAGGCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAIHLGP*LLRHVG
Trigger: CCCTACATGCCTGAGAAGCCAGGGACCAAGATGGAT...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTCACCGAGGCTGACCTaGCGGATGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSPRLT*RMMTCR
Trigger: CCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAAGGTACACTCTGGTTaGGGAGGTTGTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNKVHSG*GGCHRG
Trigger: GCCTCGGTGACAACCTCCCCAACCAGAGTGTACCTT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGAAGGTACACTCTGGTTaGGGAGGTTGTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQKVHSG*GGCHRG
Trigger: GCCTCGGTGACAACCTCCCCAACCAGAGTGTACCTT...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGCAGGAGATGATCGGATaGGTACAGCCCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKQEMIG*VQPPLV
Trigger: CACCAGTGGGGGCTGTACCCATCCGATCATCTCCTG...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSPWWP*LLVLTW
Trigger: CCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTACCTGGGCTCTCCCTaGTGGCCCTGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLYLGSP*WPWLLV
Trigger: CACCAGCAACCAGGGCCACCAGGGAGAGCCCAGGTA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGTGGCCCTGCCAGAACTaGAAGAGGATGATGAGCGAA +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKWPCQN*KRMMSE
Trigger: TTCGCTCATCATCCTCTTCCAGTTCTGGCAGGGCCA...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CCA 90 bp ATTTTAAGCAGAGACTTGTCCCAGTCAAACCTCACGCAGCCCAGCTCGTCACTCAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSRDLSQSNLTQPSSSLSEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...GAGTGACGAGCTGGGCTGCGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCTTGGCAAAATCCCTGTaGGCAACCTCGGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASLAKSL*ATSVVR
Trigger: CCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAA...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGGGCTTTCCTGGATGGTaGAGTTGTATCTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVGFPGW*SCISRL
Trigger: CAATCTTGAGATACAACTCCACCATCCAGGAAAGCC...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGREIYR*EGHSDL
Trigger: CAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTCTCCACAGATGTGGGTaGTGCCGAAGTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCLHRCG*CRSADS
Trigger: TGAGTCTGCACTTCGGCACCACCCACATCTGTGGAG...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTGTGCCTCCACAGATGTaGGTGGTGCCGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLVPPQM*VVPKCR
Trigger: TCTGCACTTCGGCACCACCCACATCTGTGGAGGCAC...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLAASGN*CRLLVP
Trigger: GGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGC...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIAASGN*CRLLVP
Trigger: GGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGC...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGAACTTCTGTCACTTTaGTGTACACACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ASTKTHDPSQDSNGATWAELLSL*CTHQVC
Trigger: ACAAACCTGGTGTGTACACCAAAGTGACAGAAGTTC...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGCAGCAACTGCCTGCCTaGCCTGTAGGTCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKQQLPA*PVGPPF
Trigger: AAAGGGTGGACCTACAGGCCAGGCAGGCAGTTGCTG...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGTACCTGATCCCTGTGTaGCCCTGCCAGAACTGGACT +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQYLIPV*PCQNWT
Trigger: AGTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528626.5
CDS-3UTR CCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACGAGGTGGGAGTCCGATaGTGCCCGGTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHEVGVR*CPVAIS
Trigger: GCTAATGGCCACCGGGCACCATCGGACTCCCACCTC...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTAAACCACCAGGGCAATaGGGAGGAGCACGCACCCGA +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIKPPGQ*GGARTR
Trigger: TCGGGTGCGTGCTCCTCCTCATTGCCCTGGTGGTTT...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCCCACTGGGCGTCAATaGGCGTGCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLPTGRQ*ACLHRC
Trigger: ACATCTGTGGAGGCACGCTCATTGACGCCCAGTGGG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTCCCACTGGGCGTCAATaGGCGTGCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIPTGRQ*ACLHRC
Trigger: ACATCTGTGGAGGCACGCTCATTGACGCCCAGTGGG...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCACCCACTGGGCGTCAATaGGCGTGCCTCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPPTGRQ*ACLHRC
Trigger: ACATCTGTGGAGGCACGCTCATTGACGCCCAGTGGG...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACAAGCAGGGTGGATGTaGGCGGACAGGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPQAGWM*ADRVRG
Trigger: GCCCCTGACCCTGTCCGCTCACATCCACCCTGCTTG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAAGCTCTGCTGGTTTCTaGAAAACTTGGGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAESSAGF*KTWESG
Trigger: GCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGCT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACATACGACATTTCCCATaGATCCCCTGGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNIRHFP*IPWGSW
Trigger: CCAAGACCCCCAGGGGATTCATGGGAAATGTCGTAT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACTTCATCCAGTTCCTTaGGGCCAGAAATATTCTGTA +
Preference number: 4 (lower is better)
Translates to: HGQSPWPESSQQPVLCRALHPVP*GQKYSV
Trigger: TACAGAATATTTCTGGCCTCAAGGAACTGGATGAAG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp AGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCTCGAAACCCAGCTGCTGGCTAAGACACTGTTCCTaGCTTGAACCCCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: REIYRWEGHSDLSKPSCWLRHCS*LEPLCQ
Trigger: TTGGCACAGGGGTTCAAGTCAGGAACAGTGTCTTAG...CCAGCAGCTGGGTTTCGAGAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATGTTCTTGCTGGAGATaGATTCCCGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLCSCWR*IPVAVP
Trigger: AGGGACAGCCACGGGAATGCATCTCCAGCAAGAACA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPPMSGS*FWPSRQ
Trigger: CTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: AQSTRMAGLTRESSEASRSHSSC*YRWEAT
Trigger: AGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACT...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEKCRLT*QGHLLS
Trigger: GGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAKCRLT*QGHLLS
Trigger: GGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTT...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCACAGATGTGGGTGGTaGCGAAGTGCAGACTCACTT +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQHRCGW*RSADSL
Trigger: AAGTGAGTCTGCACTTCGGCACCACCCACATCTGTG...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPASGNW*RLLVPA
Trigger: CGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGTACCAGCGGTTGTTCTaGTCACAGACAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKYQRLF*SQTRGP
Trigger: GGGGCCTCTTGTCTGTGAGCAGAACAACCGCTGGTA...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACGTCAGAGCCCTGGGATaGAGAAACAGTTTGTGGACC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNVRALG*RNSLWT
Trigger: GGTCCACAAACTGTTTCTGCATCCCAGGGCTCTGAC...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCACCATAGCTCCCTaGTCCCCGAAAACATCGTAT +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLATIAP*SPKTSY
Trigger: ATACGATGTTTTCGGGGAGCAGGGAGCTATGGTGGC...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCAGGATGATTAGTTaGTCCCGCCTATGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLARMIS*SRLCHH
Trigger: ATGGTGGCATAGGCGGGAGCAACTAATCATCCTGGC...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAGGAGGCTTTCCTGGATaGTGGAGTTGTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGGGFPG*WSCISR
Trigger: TCTTGAGATACAACTCCACCATCCAGGAAAGCCTCC...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCGGAGGCTTTCCTGGATaGTGGAGTTGTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGGGFPG*WSCISR
Trigger: TCTTGAGATACAACTCCACCATCCAGGAAAGCCTCC...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTCCGCAGTGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLPQWEH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGG...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCAACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPTGAGC*CPRTPS
Trigger: GGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGT...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGAGCAGCAGGCCAGCTaGTTAGGATTTTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPEQQAS*LGFSES
Trigger: CGATTCAGAAAATCCTAACCAGCTGGCCTGCTGCTC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGAAAAACTTGGGAGAGTaGCAATGCACACATATGCAC +
Preference number: 4 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVKNLGE*QCTHMH
Trigger: GTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTT...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp AGGCTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTaGCAGGAACAGGGCCAACTTAGATCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLAGESRHVDD*QEQGQLRSFSR
Trigger: CCTGCTGAAGGATCTAAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp CAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGCCTCTCCATGGTCTCTaGGGGGAAGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSKKKNILREHWREIYRWPLHGL*GEESSR
Trigger: CCTGGAGGACTCTTCCCCTCAGAGACCATGGAGAGG...CCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGCCCTCCCGCCAGGTaGACTTGGGCAGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGPPAR*TWAGSY
Trigger: GTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCTCCAGCCTGGGATTTTaGGAAGAGTTGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASSSLGF*EELTAL
Trigger: CAGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGA...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTTGTTCTTGCTGGAGATaGATTCCCGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLCSCWR*IPVAVP
Trigger: AGGGACAGCCACGGGAATGCATCTCCAGCAAGAACA...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAGCCCCCACTGGTGTTaGTCTAACAAGGTACACTCT +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREESPHWC*SNKVHS
Trigger: AGAGTGTACCTTGTTAGAGCAACACCAGTGGGGGCT...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CTTTACTCCCACACGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGATCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LYSHTTLATIQEEEHLTGSQRTA*LGQLSL
Trigger: GAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA...TCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGTAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ACCTCTCGAAACCCAGCTGCTGGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TSRNPAAGRSSLSRSHSSRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...ACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp AACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGCATTCAGACCTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NILREHWREIYRWEGHSDLSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...GTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPLAKAT*YPRPAP
Trigger: GGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGCACAGATGTGGGTGGTaGCGAAGTGCAGACTCACTT +
Preference number: 4 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKHRCGW*RSADSL
Trigger: AAGTGAGTCTGCACTTCGGCACCACCCACATCTGTG...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTCGATGAGATTGACCTaGACCTCCCGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSMRLT*TSRRKG
Trigger: CCCCTTCCTCCGGGAGGTGCAGGTCAATCTCATCGA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGCCTCGCTCTCCATCTTaGTGTAAATCCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKPRSPS*CKSREE
Trigger: TTCTTCCCTGGATTTACAGCAAGATGGAGAGCGAGG...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTGCCCAAACAAGGATTTaGTTCCCTGAGTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAAQTRI*FPEYLL
Trigger: TAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGC...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATCCCACCTTTACAGATaGTTATGCCAGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLSHLYR*LCQRAL
Trigger: CAGAGCCCTCTGGCATAAGCATCTGTAAAGGTGGGA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAGGCTTTCCTGGATGGTaGAGTTGTATCTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: CLACRSTLFQPAELCSEGGFPGW*SCISRL
Trigger: CAATCTTGAGATACAACTCCACCATCCAGGAAAGCC...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAGGAGGCTTTCCTGGATaGTGGAGTTGTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEGGFPG*WSCISR
Trigger: TCTTGAGATACAACTCCACCATCCAGGAAAGCCTCC...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGGAGGCTTTCCTGGATaGTGGAGTTGTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPGGFPG*WSCISR
Trigger: TCTTGAGATACAACTCCACCATCCAGGAAAGCCTCC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLREIYR*EGHSDL
Trigger: CAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCREIYR*EGHSDL
Trigger: CAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGGTGCCTCCACAGATGTaGGTGGTGCCGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLVPPQM*VVPKCR
Trigger: TCTGCACTTCGGCACCACCCACATCTGTGGAGGCAC...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACACCCCCGCTGTCTCCCTaGCAGGAGTCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITPPLSP*QESLPP
Trigger: TGGGGGCAGAGACTCCTGCCAGGGAGACAGCGGGGG...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTCCAGGTTTGTTTCTCTaGCCACAGCCTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIPGLFL*PQPVPQ
Trigger: CTGGGGCACAGGCTGTGGCCAGAGAAACAAACCTGG...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGAAGTTCCCAGCCTGCTaGGTGCAGTGTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLKFPAC*VQCPAA
Trigger: TGCAGCAGGACACTGCACCCAGCAGGCTGGGAACTT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAAAAACTTGGGAGAGTaGCAATGCACACATATGCAC +
Preference number: 4 (lower is better)
Translates to: AHKANGSSFSPKTVQALGKNLGE*QCTHMH
Trigger: GTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTT...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCAAGACGGTCCAGGCCCTaGGAAGCTGCATCCACCAAA +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPRRSRP*EAASTK
Trigger: TTTGGTGGATGCAGCTTCCCAGGGCCTGGACCGTCT...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TACTCCCACACGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACATACCTGATCCCTGTGTaGCCCTGCCAGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: YSHTTLATIQEEEHLTGTYLIPV*PCQNWT
Trigger: GGTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...TGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp CCACAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCGCCAAACACCTCCCTTaGAGGAGTGCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQSKKKNILREHWREIYRAKHLP*RSAAPL
Trigger: CAGAGGGGCAGCACTCCTCCAAGGGAGGTGTTTGGC...GCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp TGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCTTGTGTAGCCTCCTTTaGTCCTTAGCAACAACGTTG +
Preference number: 4 (lower is better)
Translates to: WTNQRVLRGFQKSRYSSSLCSLL*SLATTL
Trigger: CAACGTTGTTGCTAAGGACCAAAGGAGGCTACACAA...GGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATCCACAGTGATCTTCTaGGAACCTCTGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLSTVIF*EPLQHF
Trigger: GAAATGCTGCAGAGGTTCTCAGAAGATCACTGTGGA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLWRMMT*RMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp CCAGCTGCTGGCAGGTCTTCTCTGAGTAGGAGTCATTCCAGTTGCTGCTACAGAAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: PAAGRSSLSRSHSSCCYRSHSSC*YRWEAT
Trigger: AGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACT...TCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTCTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHILSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACACCTGGCAGGAGTCTCTaGCCCCACGAAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITPGRSL*PHEGPQ
Trigger: CTGGGGACCTTCGTGGGGGCAGAGACTCCTGCCAGG...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCATACCAGCGGTTGTTCTaGTCACAGACAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPYQRLF*SQTRGP
Trigger: GGGGCCTCTTGTCTGTGAGCAGAACAACCGCTGGTA...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGCCCAAACAAGGATTTaGTTCCCTGAGTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPAQTRI*FPEYLL
Trigger: TAGGAGATACTCAGGGAAGCAAATCCTTGTTTGGGC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCACCAGCCTCTCCAGCTTaGTCTTCTGGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPPASPA*SSGAVF
Trigger: AAAGACTGCCCCAGAAGAGCAAGCTGGAGAGGCTGG...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACCCAGCCTCTCCAGCTTaGTCTTCTGGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHPASPA*SSGAVF
Trigger: AAAGACTGCCCCAGAAGAGCAAGCTGGAGAGGCTGG...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGAAGGTACACTCTGGTTaGGGAGGTTGTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLKVHSG*GGCHRG
Trigger: GCCTCGGTGACAACCTCCCCAACCAGAGTGTACCTT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTTGCTGGTGCTGACCTaGCAGGAGATGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLLLVLT*QEMIGW
Trigger: CCATCCGATCATCTCCTGCCAGGTCAGCACCAGCAA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTTGGCAAAATCCCTGTaGGCAACCTCGGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLLAKSL*ATSVVR
Trigger: CCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: EASRNPGTPPPSPTFTDARLRSC*QNPCGQ
Trigger: TTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCT...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGGGCTTTCCTGGATGGTaGAGTTGTATCTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKGFPGW*SCISRL
Trigger: CAATCTTGAGATACAACTCCACCATCCAGGAAAGCC...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTCCGCAGTGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIPQWEH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGG...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTGCCCTCAGTCCGCAGTaGGAACACTGGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIALSPQ*EHWREI
Trigger: TATCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGC...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHRSARS*PSVRSG
Trigger: CCCACTGCGGACTGAGGGCCATGACCGGGCGGATCG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTAGCACACATCATCCTTaGGGTAAGGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASTHHP*GKVTVI
Trigger: TATGACAGTTACCTTACCCCAAGGATGATGTGTGCT...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGTGCAGAAACAGTTTGTaGACCTCGTCGTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQCRNSL*TSSCRI
Trigger: AATCCGACACGACGAGGTCCACAAACTGTTTCTGCA...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATTTTAAGCAGAGACTTGTCCCAGTCAAACCTCACGCAGCCCAGCTCGTCACTCACTCCCACACGACACTaGCCACAATCCAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILSRDLSQSNLTQPSSSLTPTRH*PQSKKK
Trigger: CTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGT...GAGTGACGAGCTGGGCTGCGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTCCTCCAGGCTTAGCTaGTGTCGAGGAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSSRLS*CRGEDP
Trigger: TGGATCTTCTCCTCGACATCAGCTAAGCCTGGAGGA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: RLQGKQFASLEPGGESTAVVSQD*EAVGKI
Trigger: GATTTTGCCAACAGCTTCTCAATCTTGAGATACAAC...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGT +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPAWTAA*GRCHSR
Trigger: ACGACTATGACATCGCCCTCATGCGGCTGTCCAAGC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGATTTTGAGAAGAGTTaGCAGCTCTGCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCDFEKS*QLCWFL
Trigger: CAGAAACCAGCAGAGCTGTCAACTCTTCTCAAAATC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACAGCAGGGGGTCTGGGTaGGGACTTGATGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHSRGSG*GLDAHK
Trigger: TTTATGAGCATCAAGTCCTCACCCAGACCCCCTGCT...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTGTTCTTGCTGGAGATaGATTCCCGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLCSCWR*IPVAVP
Trigger: AGGGACAGCCACGGGAATGCATCTCCAGCAAGAACA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTTGTTCTTGCTGGAGATaGATTCCCGTGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHICSCWR*IPVAVP
Trigger: AGGGACAGCCACGGGAATGCATCTCCAGCAAGAACA...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp CCACAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: PQSKKKNILREHWREIYRGQLSL*SLYLIP
Trigger: AGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCC...GCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPRHSSA*SPPPRH
Trigger: GTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPWVVPK*RLTCQG
Trigger: GCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCA...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCACAGATGTGGGTGGTaGCGAAGTGCAGACTCACTT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLHRCGW*RSADSL
Trigger: AAGTGAGTCTGCACTTCGGCACCACCCACATCTGTG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGAGCW*PRTPSS
Trigger: GCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCT +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVATGAG*WCPRTP
Trigger: AGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGC...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACCAGCTGGTGACACCTaGCAGGTACCAGCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPPAGDT*QVPAVV
Trigger: AACAACCGCTGGTACCTGGCAGGTGTCACCAGCTGG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTCCTCGCTCTCCATCTTaGTGTAAATCCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLPRSPS*CKSREE
Trigger: TTCTTCCCTGGATTTACAGCAAGATGGAGAGCGAGG...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTGGCACGTTGATGATTTaGAGGAACAGGGCCAACTTA +
Preference number: 4 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLGTLMI*RNRANL
Trigger: TAAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCC...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGATCCATCTTGGTCCCTaGCTTCTCAGGCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: QEEEHLTGTLERDIPLGRIHLGP*LLRHVG
Trigger: CCCTACATGCCTGAGAAGCCAGGGACCAAGATGGAT...CCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGGAGATGCATTCCCGTaGCTGTCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPGDAFP*LSLSMV
Trigger: GACCATGGAGAGGGACAGCCACGGGAATGCATCTCC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPCRMRT*KVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCA...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATACCTGGGCTCTCCCTaGTGGCCCTGGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITYLGSP*WPWLLV
Trigger: CACCAGCAACCAGGGCCACCAGGGAGAGCCCAGGTA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCSGSCF*PSRQVN
Trigger: GTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCT...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTGGCCCTGCCAGAACTaGAAGAGGATGATGAGCGAA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLWPCQN*KRMMSE
Trigger: TTCGCTCATCATCCTCTTCCAGTTCTGGCAGGGCCA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAGCGAACAGCGTGCTTaGGACAGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPSEQRA*DSSPSA
Trigger: AGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREERLRSC*QNPCGQ
Trigger: TTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCT...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: REQHLFLNAFVRALGCRNRLRSC*QNPCGQ
Trigger: TTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACCAGGTTTGTTTCTCTaGCCACAGCCTGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPPGLFL*PQPVPQ
Trigger: CTGGGGCACAGGCTGTGGCCAGAGAAACAAACCTGG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCATCCAGCTTGCTCTTCTaGGGCAGTCTTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPSSLLF*GSLSLE
Trigger: CTCAAGGGAAAGACTGCCCCAGAAGAGCAAGCTGGA...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATTCAGACCTCTCGAAACCCAGCTGCTGGCAGGTCTTCTCTGAGTAGGAGTCATATCTTACGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: IQTSRNPAAGRSSLSRSHILREH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGAT...ATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAGGTCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp CAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGTCCTCCAGGCTTAGCTaGTGTCGAGGAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QSKKKNILREHWREIYRWSSRLS*CRGEDP
Trigger: TGGATCTTCTCCTCGACATCAGCTAAGCCTGGAGGA...CCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATCTGCTCCTTGTACCTaGTCCCTGTGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITSAPCT*SLCGPA
Trigger: GGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp CAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QEEEHLTGTLERDIPLGRLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...CCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR TCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKVVSQD*EAVGKI
Trigger: GATTTTGCCAACAGCTTCTCAATCTTGAGATACAAC...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAGCTGGGAAAGGCCATaGAGAGCGGATTCCCATGCA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPSWERP*RADSHA
Trigger: TGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACCTGGTTAGGATTTTCTaGATCGCACCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHLVRIF*IAPRSP
Trigger: TGGAGAGCGAGGTGCGATTCAGAAAATCCTAACCAG...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCTTCATCCAGTTCCTTaGGGCCAGAAATATTCTGTA +
Preference number: 4 (lower is better)
Translates to: ISPDDATHGQSPWPESSQLHPVP*GQKYSV
Trigger: TACAGAATATTTCTGGCCTCAAGGAACTGGATGAAG...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCACACAACTTTTATTGCTaGAGACCATCGCTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPHNFYC*RPSLAA
Trigger: AGCCGCCAGCGATGGTCTTCAGCAATAAAAGTTGTG...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACTCTCGAAACCCAGCTaGTGGCAGGTCTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPLSKPS*WQVFSE
Trigger: CTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHLAKAT*YPRPAP
Trigger: GGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLKCRLT*QGHLLS
Trigger: GGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCT +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITATGAG*WCPRTP
Trigger: AGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACACTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITLGNGG*LRQLVQ
Trigger: CTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAG...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACTGCCCAGCAACTGCCTaGCTGGCCTGTAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHCPATA*LACRST
Trigger: GGTGGACCTACAGGCCAGGCAGGCAGTTGCTGGGCA...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATTCTGGGAGAACATCTaGCCAGCAACTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPFWENI*PATACL
Trigger: CAGGCAGGCAGTTGCTGGGCAGATGTTCTCCCAGAA...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGTGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVCRMRT*KVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCA...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHSGSCF*PSRQVN
Trigger: GTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHREIYR*EGHSDL
Trigger: CAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACCGCAGTGGGAACACTaGAGAGAGATATACCGCTGG +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPPQWEH*REIYRW
Trigger: CCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGCCCTCAGTCCGCAGTaGGAACACTGGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPALSPQ*EHWREI
Trigger: TATCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACTCCACAGATGTGGGTaGTGCCGAAGTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPLHRCG*CRSADS
Trigger: TGAGTCTGCACTTCGGCACCACCCACATCTGTGGAG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITTGAGC*CPRTPS
Trigger: GGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAGAACTTCTGTCACTTTaGTGTACACACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEELLSL*CTHQVC
Trigger: ACAAACCTGGTGTGTACACCAAAGTGACAGAAGTTC...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCGAACTTCTGTCACTTTaGTGTACACACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CGPRRVGFACQPKQGFASELLSL*CTHQVC
Trigger: ACAAACCTGGTGTGTACACCAAAGTGACAGAAGTTC...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGAGCTGTCAAGGCTTCTaGACTTTTTGGAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKSCQGF*TFWRIF
Trigger: AAAGATTCTCCAAAAAGTCCAGAAGCCTTGACAGCT...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CCA 90 bp CCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: PRRRTSYGNTGERYTAGKREIYR*EGHSDL
Trigger: GAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...CTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CCA 90 bp TCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATAAAACATCGTATAATTaGCCTCTACTGGTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SEASRNPGTPPPSPTFTDKTSYN*PLLVVL
Trigger: CAAGACGACCAGTAGAGGCCAATTATACGATGTTTT...ATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
3UTR CAA 72 bp GGACACTCCTGTAGGAACATCCACGGTACTCAACTCTaGTCTCCAGGTAATTTCCAGCCTGGGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GHSCRNIHGTQL*SPGNFQPGILR
Trigger: TCTCAAAATCCCAGGCTGGAAATTACCTGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
3UTR CAA 72 bp AGAAACAGTTTGTGGACCTCGTCGTGTCGGATTTGCTaGCCAGCCCAAACAAGGATTTGCTTCCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: RNSLWTSSCRIC*PAQTRICFPEY
Trigger: ATACTCAGGGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACAAACTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCCTCTCCATGGTCTCTaGGGGGAAGAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHPLHGL*GEESSR
Trigger: CCTGGAGGACTCTTCCCCTCAGAGACCATGGAGAGG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAAACCACCAGGGCAATaGGGAGGAGCACGCACCCGA +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHKPPGQ*GGARTR
Trigger: TCGGGTGCGTGCTCCTCCTCATTGCCCTGGTGGTTT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: CCRQECGLLPSLANIPQCVVSQD*EAVGKI
Trigger: GATTTTGCCAACAGCTTCTCAATCTTGAGATACAAC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR TCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGT +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITAWTAA*GRCHSR
Trigger: ACGACTATGACATCGCCCTCATGCGGCTGTCCAAGC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACACGAATATGGGGACGCTaGGGGGACCTCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITRIWGR*GDLCLQ
Trigger: TTGTAGGCAGAGGTCCCCTCAGCGTCCCCATATTCG...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTACCACAGGGTTGGTTGTaGAGAGTAAATGAAATCATA +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLPQGWL*RVNEII
Trigger: TATGATTTCATTTACTCTTCACAACCAACCCTGTGG...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGCCTAGCCTGCCAGGATaGTTAGTTGCTCCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVPSLPG*LVAPAY
Trigger: ATAGGCGGGAGCAACTAATCATCCTGGCAGGCTAGG...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTCTTCAGGGTCCTCCCTaGGCCCCCATTACCTGTCTT +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCLQGPP*APITCL
Trigger: AAGACAGGTAATGGGGGCTCAGGGAGGACCCTGAAG...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGAGTCATTCCAGTTGCTaGTACAGATGGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSHSSC*YRWEAT
Trigger: AGTGGCTTCCCATCTGTAGCAGCAACTGGAATGACT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITWVVPK*RLTCQG
Trigger: GCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHLGNGG*LRQLVQ
Trigger: CTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATCGATGAGATTGACCTaGACCTCCCGGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITSMRLT*TSRRKG
Trigger: CCCCTTCCTCCGGGAGGTGCAGGTCAATCTCATCGA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGCTGTCCCTCTCCATaGTCTCTGAGGGGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGCPSP*SLRGRV
Trigger: GACTCTTCCCCTCAGAGACCATGGAGAGGGACAGCC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITCRMRT*KVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGGGTACAGCCCCCACTaGTGTTGCTCTAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPGYSPH*CCSNKV
Trigger: TACCTTGTTAGAGCAACACCAGTGGGGGCTGTACCC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGGCCCTCAGTCCGCAGTaGGAACACTGGAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVALSPQ*EHWREI
Trigger: TATCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGC...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACGCAGTGAGCACCCACTaGGCGTCAATGAGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHAVSTH*ASMSVP
Trigger: AGGCACGCTCATTGACGCCCAGTGGGTGCTCACTGC...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHTGAGC*CPRTPS
Trigger: GGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTTATGCCAGAGGGCCTTATTTATAACCCTTaGGCTTCAGTTTCCCTAATT +
Preference number: 4 (lower is better)
Translates to: IPVLLLPLPPLQMLMPEGLIYNP*ASVSLI
Trigger: AATTAGGGAAACTGAAGCCCAAGGGTTATAAATAAG...GCCCTCTGGCATAAGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPLAGLL*VGVIPV
Trigger: AACTGGAATGACTCCTACTCAGAGAAGACCTGCCAG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACCTTTTTCAACCCGCTaGGCTCTCCATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPPFSTR*ALHLAV
Trigger: TACAGCAAGATGGAGAGCTCAGCGGGTTGAAAAAGG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430170.6
CDS-3UTR TCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTACATCAATTTGTAATGTaGGATGTGTCATTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLHQFVM*DVSFGA
Trigger: TGCTCCAAATGACACATCTCACATTACAAATTGATG...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTGTCCCCTGTCCACAGTaGTCTTCTGAGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCVPCPQ*SSENLC
Trigger: GCAGAGGTTCTCAGAAGATCACTGTGGACAGGGGAC...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATGGCGGATGATGACCTaGCGGATGAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITWRMMT*RMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAGCCCCCACTGGTGTTaGTCTAACAAGGTACACTCT +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPSPHWC*SNKVHS
Trigger: AGAGTGTACCTTGTTAGAGCAACACCAGTGGGGGCT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGQLSL*SLYLIP
Trigger: AGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACTCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHSQRTA*LGQLSL
Trigger: GAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCC +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPKCRLT*QGHLLS
Trigger: GGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATACCAGCGGTTGTTCTaGTCACAGACAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITYQRLF*SQTRGP
Trigger: GGGGCCTCTTGTCTGTGAGCAGAACAACCGCTGGTA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCTGAGCTCTCCATCTTaGTGTAAATCCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLLSSPS*CKSREE
Trigger: TTCTTCCCTGGATTTACAGCAAGATGGAGAGCTCAG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430170.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAGGAAGTTCCCAGCCTaGTGGGTGCAGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHRKFPA*WVQCPA
Trigger: AGCAGGACACTGCACCCAGCAGGCTGGGAACTTCCT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACGGAGATGCATTCCCGTaGCTGTCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHGDAFP*LSLSMV
Trigger: GACCATGGAGAGGGACAGCCACGGGAATGCATCTCC...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCAGGAGATGATCGGATaGGTACAGCCCCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHQEMIG*VQPPLV
Trigger: CACCAGTGGGGGCTGTACCCATCCGATCATCTCCTG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTTTGCTGGTGCTGACCTaGCAGGAGATGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCLLVLT*QEMIGW
Trigger: CCATCCGATCATCTCCTGCCAGGTCAGCACCAGCAA...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATACCTGATCCCTGTGTaGCCCTGCCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITYLIPV*PCQNWK
Trigger: CTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTTACCTGATCCCTGTGTaGCCCTGCCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCYLIPV*PCQNWK
Trigger: CTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTA...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTTTGGCAAAATCCCTGTaGGCAACCTCGGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCLAKSL*ATSVVR
Trigger: CCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAA...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAGGTCTGTCCATGCATaGGGAGGCAAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHRSVHA*GGKQGG
Trigger: TCCACCCTGCTTGCCTCCCCATGCATGGACAGACCT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAATAATTGGCCTCTACTaGTCGTCTTGGTGTATTTTA +
Preference number: 4 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLIIGLY*SSWCIL
Trigger: TAAAATACACCAAGACGACCAGTAGAGGCCAATTAT...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGGAGCACGAGAATGGCTaGACTAACCAGAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVEHENG*TNQRVL
Trigger: GAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTC...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACATCCCTGTGTGGCCCTaGCAGAACTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHIPVWP*QNWKRM
Trigger: CATCCTCTTCCAGTTCTGGCAGGGCCACACAGGGAT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCTAAAGGTCTGTCCATaGATGGGGAGGCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHLKVCP*MGRQAG
Trigger: CCCTGCTTGCCTCCCCATGCATGGACAGACCTTTAG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR GCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACGGTGCAGTGTCCTGCTaGAGGGATCTTACCTCCATC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHGAVSC*RDLTSI
Trigger: GATGGAGGTAAGATCCCTGCAGCAGGACACTGCACC...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAATCCATCTTGGTCCCTaGCTTCTCAGGCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITIHLGP*LLRHVG
Trigger: CCCTACATGCCTGAGAAGCCAGGGACCAAGATGGAT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430170.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAAGGTACACTCTGGTTaGGGAGGTTGTCACCGAGGC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHKVHSG*GGCHRG
Trigger: GCCTCGGTGACAACCTCCCCAACCAGAGTGTACCTT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTGGGTACAGCCCCCACTaGTGTTGCTCTAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCGYSPH*CCSNKV
Trigger: TACCTTGTTAGAGCAACACCAGTGGGGGCTGTACCC...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACTTGGCAAAATCCCTGTaGGCAACCTCGGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHLAKSL*ATSVVR
Trigger: CCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAA...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACCTCCACAGATGTGGGTaGTGCCGAAGTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHLHRCG*CRSADS
Trigger: TGAGTCTGCACTTCGGCACCACCCACATCTGTGGAG...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGAGCACACATCATCCTTaGGGTAAGGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSTHHP*GKVTVI
Trigger: TATGACAGTTACCTTACCCCAAGGATGATGTGTGCT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGGGAATCAGATCGACCTaGTTCCAATCCCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVGIRST*FQSQSY
Trigger: GTAGCTCTGGGATTGGAACCAGGTCGATCTGATTCC...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR TCA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLVVSQD*EAVGKI
Trigger: GATTTTGCCAACAGCTTCTCAATCTTGAGATACAAC...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTATCCTCTGCAGAAACTaGAACGTTTTCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIILCRN*NVFKVH
Trigger: ATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGAT...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACACAGACAGCTGGGATTaGCCCCAGGCATCACATTTG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHTDSWD*PQASHL
Trigger: CAAATGTGATGCCTGGGGTCAATCCCAGCTGTCTGT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR GCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAAGGAGTCATTCCAGTTaGTGCTACAGATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITRSHSS*CYRWEA
Trigger: GGCTTCCCATCTGTAGCAGCAACTGGAATGACTCCT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACGGGTACAGCCCCCACTaGTGTTGCTCTAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHGYSPH*CCSNKV
Trigger: TACCTTGTTAGAGCAACACCAGTGGGGGCTGTACCC...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAGTTGCTGCTACAGATaGGAAGCCACTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHSCCYR*EATDGR
Trigger: CCTCCCATCAGTGGCTTCCCATCTGTAGCAGCAACT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITREIYR*EGHSDL
Trigger: CAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp CCTCATATGTCAAATGAAGTTAATAATAGTGCCTGCTCCACAGGGTTGGTTGTGGGCTTTCCTGGATGGTaGAGTTGTATCTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: PHMSNEVNNSACSTGLVVGFPGW*SCISRL
Trigger: CAATCTTGAGATACAACTCCACCATCCAGGAAAGCC...CACAACCAACCCTGTGGAGCAGGCACTATTATTAACTTCATTTGACATATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGAGGCTTTCCTGGATaGTGGAGTTGTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGGFPG*WSCISR
Trigger: TCTTGAGATACAACTCCACCATCCAGGAAAGCCTCC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAGCACACATCATCCTTaGGGTAAGGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPSTHHP*GKVTVI
Trigger: TATGACAGTTACCTTACCCCAAGGATGATGTGTGCT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTATCTTTAAGAGTCTTTaGCTTCTGCCCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IKISTQALTPSSICNVRCIFKSL*LLPCRS
Trigger: GCTTCTGCAGGGCAGAAGTCAAAGACTCTTAAAGAT...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGGCTTTCCTGGATGGTaGAGTTGTATCTCAAGATTG +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITGFPGW*SCISRL
Trigger: CAATCTTGAGATACAACTCCACCATCCAGGAAAGCC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHRLRSC*QNPCGQ
Trigger: TTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CCA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGAACTTCTGTCACTTTaGTGTACACACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GHEERIPMHKCLITKTITELLSL*CTHQVC
Trigger: ACAAACCTGGTGTGTACACCAAAGTGACAGAAGTTC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHVVSQD*EAVGKI
Trigger: GATTTTGCCAACAGCTTCTCAATCTTGAGATACAAC...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR TCA 90 bp ACAAAATCCTCTGCAGAAACTGAAACGTTTTCAAAGTCCATTGCAACCTTACACATCCTCTGCAGAAACTaGAACGTTTTCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TKSSAETETFSKSIATLHILCRN*NVFKVH
Trigger: ATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGAT...GTGTAAGGTTGCAATGGACTTTGAAAACGTTTCAGTTTCTGCAGAGGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS TCA 90 bp GGGGACCTCTGCCTACAACCTGGGTGCTCCTCCAGGGTCCCCACCTaGGGAAGTTCCCAGCCTGCTGGGTGCAGTGTCCTGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GDLCLQPGCSSRVPT*GSSQPAGCSVLLQG
Trigger: TCCCTGCAGCAGGACACTGCACCCAGCAGGCTGGGAACTTCCTCAGGTGGGGACCCTGGAGGAGCACCCAGGTTGTAGGCAGAGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS CCA 90 bp AGGGCAATGAGGAGGAGCACGCACCCGATGAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAACTTGGGCAGGCTCGTACCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RAMRRSTHPMSGSCF*PSRQVNLGRLVPGL
Trigger: GAGCCCAGGTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCCTCCTCATTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
CDS-3UTR CAA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCTGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPCGQPR*SGEHSR
Trigger: TCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACA...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS GCA 90 bp ACCACCAGGGCAATGAGGAGGAGCACGCACCCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAGGTGAACTTGGGCAGGCTCGTACCT +
Preference number: 5 (lower is better)
Translates to: TTRAMRRSTHPMSGS*FWPSRQVNLGRLVP
Trigger: AGGTACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCCTCCTCATTGCCCTGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
CDS GCA 90 bp AGATGTGGGTGGTGCCGAAGTGCAGACTCACTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCCCTCCCACGATCCGCCCGGTCATGG +
Preference number: 5 (lower is better)
Translates to: RCGWCRSADSLAKAT*YPRPAPLPRSARSW
Trigger: CCATGACCGGGCGGATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 90 bp TCTCGGCAATGGAGGCTGCCTCAGGCAACTGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGCCCTCCAGGACCTTCTCCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: SRQWRLPQATGAGCW*PRTPSSPPGPSPGS
Trigger: TGACCCGGGAGAAGGTCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS-3UTR CAA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCCAAGGTACACTCTGGTaGGGGAGGTTGTCACCGAGG +
Preference number: 5 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPQGTLW*GRLSPR
Trigger: CCTCGGTGACAACCTCCCCAACCAGAGTGTACCTTG...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCAGATGCTGTAGTGACTaGGGGGATGCCCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPRCCSD*GDAHPG
Trigger: CCCAGGATGGGCATCCCCCAAGTCACTACAGCATCT...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS GCA 90 bp AGCGTGCCTCCACAGATGTGGGTGGTGCCGAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCCGAGGCCAGCGCCCCTCCCACGATC +
Preference number: 5 (lower is better)
Translates to: SVPPQMWVVPKCRLT*QGHLLSEASAPPTI
Trigger: GATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTGTGGAGGCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 90 bp TGGTTGGGGAGGTTGTCACCGAGGCTGACCTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAAGTGATGCCAGAGCCGGAGATGCCC +
Preference number: 5 (lower is better)
Translates to: WLGRLSPRLTWRMMT*RMRTWKVMPEPEMP
Trigger: GGGCATCTCCGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGACAACCTCCCCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
ENST00000528626.5
CDS GCA 90 bp TGGGCGTCAATGAGCGTGCCTCCACAGATGTGGGTGGTGCCGAAGTaGAGACTCACTTGCCAAGGCCACTTGCTATCCGAGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: WASMSVPPQMWVVPK*RLTCQGHLLSEASA
Trigger: GGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTGTGGAGGCACGCTCATTGACGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 90 bp ACCACCCCGTCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCTGTGTGGCCCTGCCAGAACTGGACC +
Preference number: 5 (lower is better)
Translates to: TTPSQRTACLGQLSL*SLYLIPVWPCQNWT
Trigger: GGTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACTCTGGTTGGGGAGGTaGTCACCGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSLWLGR*SPRLTW
Trigger: CCAGGTCAGCCTCGGTGACAACCTCCCCAACCAGAG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS GCA 90 bp ACCACCCCGTCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCTGTGTGGCCCTGCCAGAACTGGAAG +
Preference number: 5 (lower is better)
Translates to: TTPSQRTACLGQLSL*SLYLIPVWPCQNWK
Trigger: CTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
CDS GCA 90 bp TGTCCCAGTCAAACCTCACGCAGCCCAGCTCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCACAGCGAACAGCGTGCTTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: CPSQTSRSPARHSSA*SPPPRHSEQRAWDS
Trigger: GCTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACGAGCTGGGCTGCGTGAGGTTTGACTGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS GCA 90 bp CTGTTGATGATGATCTCGGCAATGGAGGCTGCCTCAGGCAACTGGTaGAGGTTGCTGGTGCCCGCGTACACCTTCCAGCCCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: LLMMISAMEAASGNW*RLLVPAYTFQPSRT
Trigger: GGTCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGATCATCATCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 90 bp ACCACCCCGTCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCTGTGTGGCCCTGCCAGAACTGGACT +
Preference number: 5 (lower is better)
Translates to: TTPSQRTACLGQLSL*SLYLIPVWPCQNWT
Trigger: AGTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528626.5
CDS-3UTR CAA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGACAGCGAACAGCGTGCTaGGGACAGCTCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: AHKANGSSFSPKTVQALGQRTAC*GQLSLC
Trigger: GCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTG...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACC +
Preference number: 5 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREGNWCR*LVPAYT
Trigger: GGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp TGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACC +
Preference number: 5 (lower is better)
Translates to: WTNQRVLRGFQKSRYSSSGNWCR*LVPAYT
Trigger: GGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCC...GGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGACAGGGTCAGGGGCTaGGACAGCCGCATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPDRVRG*DSRMRA
Trigger: CGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS CCA 90 bp TTGCTGTTGATGATGATCTCGGCAATGGAGGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCCGCGTACACCTTCCAGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLLMMISAMEAASGN*CRLLVPAYTFQPSR
Trigger: CCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGATCATCATCAACAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS-3UTR CAA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTCTCTGGTTGGGGAGGTaGTCACCGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: RLQGKQFASLEPGGESTALWLGR*SPRLTW
Trigger: CCAGGTCAGCCTCGGTGACAACCTCCCCAACCAGAG...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCACAAGGTACACTCTGGTaGGGGAGGTTGTCACCGAGG +
Preference number: 5 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAQGTLW*GRLSPR
Trigger: CCTCGGTGACAACCTCCCCAACCAGAGTGTACCTTG...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTCAGCGAACAGCGTGCTaGGGACAGCTCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAQRTAC*GQLSLC
Trigger: GCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTG...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAGACAGGGTCAGGGGCTaGGACAGCCGCATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: WPVGPPFFNPLSSVLREEDRVRG*DSRMRA
Trigger: CGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTC...TTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGACAGGGTCAGGGGCTaGGACAGCCGCATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLDRVRG*DSRMRA
Trigger: CGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTC...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTTGAAGTCGATGAGATaGACCTGCACCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCLKSMR*TCTSRR
Trigger: CCTCCGGGAGGTGCAGGTCAATCTCATCGACTTCAA...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCTTCCAGCCTGGGATTTaGAGAAGAGTTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPFQPGI*RRVDSS
Trigger: AGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGAA...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCGCGAGTCCAGGCACGTaGATGATTTGCAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCASPGT*MICRNR
Trigger: CCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGC...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGCTGGGCTGATCTGCTaGGATCCTGCCTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAAGLIC*DPASEK
Trigger: CTTCTCAGAGGCAGGATCCAAGCAGATCAGCCCAGC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCGCTGGCATCTGCCCGTCACACAACTTTTATaGCTGAAGACCATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: PRSIPGQQWRHLGRWHLPVTQLL*LKTIAG
Trigger: GCCAGCGATGGTCTTCAGCAATAAAAGTTGTGTGAC...GGGCAGATGCCAGCGGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGATGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CLACRSTLFQPAELCSEGCGQPR*SGEHSR
Trigger: TCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACA...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKTCQGH*LSEASA
Trigger: GGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGT...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACC +
Preference number: 5 (lower is better)
Translates to: ISPDDATHGQSPWPESSQGNWCR*LVPAYT
Trigger: GGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCC...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCACTCGTCGTGTCGGATTaGCTTGCCAGCCCAAACAAG +
Preference number: 5 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSLVVSD*LASPNK
Trigger: CTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAG...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCTGGGCTGATCTGCTaGGATCCTGCCTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCAGLIC*DPASEK
Trigger: CTTCTCAGAGGCAGGATCCAAGCAGATCAGCCCAGC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS GCA 90 bp CCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTaGTGTGCAGAGCAGCAGGCCAGCTGGTTAGGATTTTCTGAATCG +
Preference number: 5 (lower is better)
Translates to: PHMASHHGQSLHSSR*CAEQQASWLGFSES
Trigger: CGATTCAGAAAATCCTAACCAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGACAAGGTACACTCTGGTaGGGGAGGTTGTCACCGAGG +
Preference number: 5 (lower is better)
Translates to: CLACRSTLFQPAELCSEGQGTLW*GRLSPR
Trigger: CCTCGGTGACAACCTCCCCAACCAGAGTGTACCTTG...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: REQHLFLNAFVRALGCRNTCQGH*LSEASA
Trigger: GGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGT...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLTCQGH*LSEASA
Trigger: GGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGT...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAACCCCAGGCATCACATTaGACCCTGTCCAGAACACCC +
Preference number: 5 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREPQASH*TLSRTP
Trigger: GGGTGTTCTGGACAGGGTCAAATGTGATGCCTGGGG...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGGTCTGGGTGAGGACTaGATGCTCATAAAGCCAACG +
Preference number: 5 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAGLGED*MLIKPT
Trigger: CGTTGGCTTTATGAGCATCAAGTCCTCACCCAGACC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCTCGTGTCGGATTTGCTaGCCAGCCCAAACAAGGATT +
Preference number: 5 (lower is better)
Translates to: ASTKTHDPSQDSNGATWASCRIC*PAQTRI
Trigger: AATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGA...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAGCCTCCTTCCCAGTCTaGCTAACATTCCCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAASFPV*LTFPSV
Trigger: TACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGC...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CGACTGCAGGGTAAGCAATTTGCCAGTCTAGAGCCAGGTGGGGAGAGCACTGCTTGCCCTGCAGAAGCTTaGGGGCCCGGATATGAGTTG +
Preference number: 5 (lower is better)
Translates to: RLQGKQFASLEPGGESTACPAEA*GPGYEL
Trigger: CAACTCATATCCGGGCCCCAAAGCTTCTGCAGGGCA...AGCAGTGCTCTCCCCACCTGGCTCTAGACTGGCAAATTGCTTACCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTCTCTGGTTGGGGAGGTaGTCACCGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLLWLGR*SPRLTW
Trigger: CCAGGTCAGCCTCGGTGACAACCTCCCCAACCAGAG...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCCAAGGTACACTCTGGTaGGGGAGGTTGTCACCGAGG +
Preference number: 5 (lower is better)
Translates to: NLFGTHLGYPSSAELPLAQGTLW*GRLSPR
Trigger: CCTCGGTGACAACCTCCCCAACCAGAGTGTACCTTG...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp TGTGGACCTCGTCGTGTCGGATTTGCTTGCCAGCCCAAACAAGGATTTGCTTCCTGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CGPRRVGFACQPKQGFASCGQPR*SGEHSR
Trigger: TCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACA...GGAAGCAAATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAGGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLCGQPR*SGEHSR
Trigger: TCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATC +
Preference number: 5 (lower is better)
Translates to: AHKANGSSFSPKTVQALGEVQTH*PRPLAI
Trigger: GATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTC...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATC +
Preference number: 5 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCEVQTH*PRPLAI
Trigger: GATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTC...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCAGACAGGGTCAGGGGCTaGGACAGCCGCATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPDRVRG*DSRMRA
Trigger: CGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTC...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGCAGAGCAATCCAGCAGGTCTCATaGAGGCTAAAGGTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: HGQSPWPESSQQPVLCRAIQQVS*RLKVCP
Trigger: TGGACAGACCTTTAGCCTCAATGAGACCTGCTGGAT...TGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTCTGTCTCCCTGGTCTaGCCAAAGCCTGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASVSLV*PKPVIQ
Trigger: CTGGATCACAGGCTTTGGCAAGACCAGGGAGACAGA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTTGAAGTCGATGAGATaGACCTGCACCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEALKSMR*TCTSRR
Trigger: CCTCCGGGAGGTGCAGGTCAATCTCATCGACTTCAA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGAGGCACGTTGATGATTaGCAGGAACAGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVRHVDD*QEQGQL
Trigger: AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCT...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GACCATCGCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCGTCACACAACTTTTATaGCTGAAGACCATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: DHRWRLLQTGMWPPSQSCVTQLL*LKTIAG
Trigger: GCCAGCGATGGTCTTCAGCAATAAAAGTTGTGTGAC...GCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGCGATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS GCA 90 bp CTCATCGGTGTAATTGCTGTTGATGATGATCTCGGCAATGGAGGCTaGCTCAGGCAACTGGTGCAGGTTGCTGGTGCCCGCGTACACCTT +
Preference number: 5 (lower is better)
Translates to: LIGVIAVDDDLGNGG*LRQLVQVAGARVHL
Trigger: AAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGATCATCATCAACAGCAATTACACCGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS-3UTR CAA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAAGGAGAAGATCCATCTaGGTCCCTGGCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RGNSICFLTPSSEPWDAERRRSI*VPGFSG
Trigger: GCCTGAGAAGCCAGGGACCAAGATGGATCTTCTCCT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524993.6
CDS-3UTR CAA 90 bp AATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTAGCCAGGAGAAGATCCATCTaGGTCCCTGGCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NLFGTHLGYPSSAELPLARRRSI*VPGFSG
Trigger: GCCTGAGAAGCCAGGGACCAAGATGGATCTTCTCCT...GGCTAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp TGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTGAAGATTGAGAAGCTGTaGGCAAAATCCCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: CHTWPVTMARVFTAAGAVKIEKL*AKSLWA
Trigger: TGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTT...CACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CAGAGAGTCCTCCGAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACAAGATTGAGAAGCTGTaGGCAAAATCCCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: QRVLRGFQKSRYSSSLSHKIEKL*AKSLWA
Trigger: TGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTT...GTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTCGGAGGACTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATC +
Preference number: 5 (lower is better)
Translates to: AWPVGPPFFNPLSSVLREEVQTH*PRPLAI
Trigger: GATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTC...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp GCTCTGCTGGTTTCTGAAAAACTTGGGAGAGTGGCAATGCACACATATGCACACGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACC +
Preference number: 5 (lower is better)
Translates to: ALLVSEKLGRVAMHTYAHGNWCR*LVPAYT
Trigger: GGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCC...GTGTGCATATGTGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCAGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCTCATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAATCCAGCAGGTCTCATaGAGGCTAAAGGTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AHKANGSSFSPKTVQALGIQQVS*RLKVCP
Trigger: TGGACAGACCTTTAGCCTCAATGAGACCTGCTGGAT...TCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAGCCAGGTACCAGCGGTaGTTCTGCTCACAGACAAGA +
Preference number: 5 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPARYQR*FCSQTR
Trigger: TCTTGTCTGTGAGCAGAACAACCGCTGGTACCTGGC...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCATCCACCAAAACCCACGATCCATCCCAGGACAGCAATGGCGCCACCTGGGCCAGAACTTCTGTCACTTaGGTGTACACACCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: ASTKTHDPSQDSNGATWARTSVT*VYTPGL
Trigger: CAAACCTGGTGTGTACACCAAAGTGACAGAAGTTCT...GGCCCAGGTGGCGCCATTGCTGTCCTGGGATGGATCGTGGGTTTTGGTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATCCTGCCTCTGAGAAGCACAGCACCACAAAAGACTCTGACGGGCCCAAGGAAGCCCATCCTGGGGACTTaGTCCAGTCTCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: ILPLRSTAPQKTLTGPRKPILGT*SSLFIQ
Trigger: CTGGATGAAGAGACTGGACAAAGTCCCCAGGATGGG...CTTCCTTGGGCCCGTCAGAGTCTTTTGTGGTGCTGTGCTTCTCAGAGGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTAGATGCTGTAGTGACTaGGGGGATGCCCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCRCCSD*GDAHPG
Trigger: CCCAGGATGGGCATCCCCCAAGTCACTACAGCATCT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCTGGCGGCTGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTGCCTCCTTCCCAGTCTaGCTAACATTCCCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: AGGCCRQECGLLPSLANIASFPV*LTFPSV
Trigger: TACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGC...AATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCAGCCGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CTTTACTCCCACACGACACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGACAGCGAACAGCGTGCTaGGGACAGCTCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LYSHTTLATIQEEEHLTGQRTAC*GQLSLC
Trigger: GCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTG...TCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGTGTCGTGTGGGAGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp GGGGCCCCTGGGAGCCTACGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCATCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GAPGSLRGNSICFLTPSSSWMVE*YLKIEK
Trigger: CTTCTCAATCTTGAGATACAACTCCACCATCCAGGA...TGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCGTAGGCTCCCAGGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATC +
Preference number: 5 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAEVQTH*PRPLAI
Trigger: GATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTC...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGACAGGGTCAGGGGCTaGGACAGCCGCATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPDRVRG*DSRMRA
Trigger: CGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAATCCAGCAGGTCTCATaGAGGCTAAAGGTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: CLACRSTLFQPAELCSEGIQQVS*RLKVCP
Trigger: TGGACAGACCTTTAGCCTCAATGAGACCTGCTGGAT...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTTCTGTCTCCCTGGTCTaGCCAAAGCCTGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCSVSLV*PKPVIQ
Trigger: CTGGATCACAGGCTTTGGCAAGACCAGGGAGACAGA...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTGCCAGGTACCAGCGGTaGTTCTGCTCACAGACAAGA +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCARYQR*FCSQTR
Trigger: TCTTGTCTGTGAGCAGAACAACCGCTGGTACCTGGC...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTCCCATCCTGGGGACTTaGTCCAGTCTCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCPILGT*SSLFIQ
Trigger: CTGGATGAAGAGACTGGACAAAGTCCCCAGGATGGG...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTTCGTGTCGGATTTGCTaGCCAGCCCAAACAAGGATT +
Preference number: 5 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEASCRIC*PAQTRI
Trigger: AATCCTTGTTTGGGCTGGCAAGCAAATCCGACACGA...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATTAGCCCAGATGATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCTCGTCGTGTCGGATTaGCTTGCCAGCCCAAACAAG +
Preference number: 5 (lower is better)
Translates to: ISPDDATHGQSPWPESSQLVVSD*LASPNK
Trigger: CTTGTTTGGGCTGGCAAGCAAATCCGACACGACGAG...CTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCATCATCTGGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACGCGAGTCCAGGCACGTaGATGATTTGCAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: REQHLFLNAFVRALGCRNASPGT*MICRNR
Trigger: CCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGC...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATTTTAAGCAGAGACTTGTCCCAGTCAAACCTCACGCAGCCCAGCTCGTCACTCAGGAGAAGATCCATCTaGGTCCCTGGCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ILSRDLSQSNLTQPSSSLRRRSI*VPGFSG
Trigger: GCCTGAGAAGCCAGGGACCAAGATGGATCTTCTCCT...GAGTGACGAGCTGGGCTGCGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACC +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPGNWCR*LVPAYT
Trigger: GGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCC...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGGCCAGGTACCAGCGGTaGTTCTGCTCACAGACAAGA +
Preference number: 5 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKARYQR*FCSQTR
Trigger: TCTTGTCTGTGAGCAGAACAACCGCTGGTACCTGGC...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp ATGCCACACATGGCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTGCTGTTGGTTTCTGAAAAACTaGGGAGAGTGGCAATGCACA +
Preference number: 5 (lower is better)
Translates to: MPHMASHHGQSLHSSRCCWFLKN*GEWQCT
Trigger: TGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCA...ACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGCCATGTGTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ATAAAGCCAACGGGAGCAGCTTTTCACCGAAGACGGTCCAGGCCCTGGGAAGCTCACGGTACTCAACTCTaGTCTCCAGGTAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: IKPTGAAFHRRRSRPWEAHGTQL*SPGNFQ
Trigger: CTGGAAATTACCTGGAGACAAGAGTTGAGTACCGTG...AGCTTCCCAGGGCCTGGACCGTCTTCGGTGAAAAGCTGCTCCCGTTGGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAACGGTCTGGGTGAGGACTaGATGCTCATAAAGCCAACG +
Preference number: 5 (lower is better)
Translates to: REQHLFLNAFVRALGCRNGLGED*MLIKPT
Trigger: CGTTGGCTTTATGAGCATCAAGTCCTCACCCAGACC...GTTTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS TCA 90 bp AGACCTGTGGAGGCTTTCCTGGATGGTGGAGTTGTATCTCAAGATTaGGAAGCTGTTGGCAAAATCCCTGTGGGCAACCTCGGTTGTCCG +
Preference number: 5 (lower is better)
Translates to: RPVEAFLDGGVVSQD*EAVGKIPVGNLGCP
Trigger: CGGACAACCGAGGTTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTTGAGATACAACTCCACCATCCAGGAAAGCCTCCACAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACTCTGGTTGGGGAGGTaGTCACCGAGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPLWLGR*SPRLTW
Trigger: CCAGGTCAGCCTCGGTGACAACCTCCCCAACCAGAG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCAAGGTACACTCTGGTaGGGGAGGTTGTCACCGAGG +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLQGTLW*GRLSPR
Trigger: CCTCGGTGACAACCTCCCCAACCAGAGTGTACCTTG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCACAGCGAACAGCGTGCTaGGGACAGCTCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPQRTAC*GQLSLC
Trigger: GCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTG...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAAAGATTGAGAAGCTGTaGGCAAAATCCCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEKIEKL*AKSLWA
Trigger: TGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAATCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: AWPVGPPFFNPLSSVLRESWMVE*YLKIEK
Trigger: CTTCTCAATCTTGAGATACAACTCCACCATCCAGGA...TTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp GCTCAGAGCACGAGAATGGCTGGACTAACCAGAGAGTCCTCCGAGGCTTCCAGATCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: AQSTRMAGLTRESSEASRSWMVE*YLKIEK
Trigger: CTTCTCAATCTTGAGATACAACTCCACCATCCAGGA...TCTGGAAGCCTCGGAGGACTCTCTGGTTAGTCCAGCCATTCTCGTGCTCTGAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPTCQGH*LSEASA
Trigger: GGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp TGCCTGGCCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAACTTCTGTCACTTaGGTGTACACACCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: CLACRSTLFQPAELCSEGRTSVT*VYTPGL
Trigger: CAAACCTGGTGTGTACACCAAAGTGACAGAAGTTCT...TCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGGCCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTAGGCACGTTGATGATTaGCAGGAACAGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCRHVDD*QEQGQL
Trigger: AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCT...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp CATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGCATTCAGACCTGACACTGTTCCTGACTaGAACCCCTGTGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: HLTGTLERDIPLGRAFRPDTVPD*NPCAKH
Trigger: GTGTTTGGCACAGGGGTTCAAGTCAGGAACAGTGTC...AGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp TCCAATCTTTTCGGGACCCACCTTGGCTATCCTTCCTCTGCTGAGCTTCCCCTATCTGCAGCATTTCCTTaGTGTAGCCTCCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: SNLFGTHLGYPSSAELPLSAAFP*CSLLWS
Trigger: GGACCAAAGGAGGCTACACAAAGGAAATGCTGCAGA...TAGGGGAAGCTCAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp CGCGGGAACAGCATCTGTTTCTTAACGCCTTCGTCAGAGCCCTGGGATGCAGAAATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: RGNSICFLTPSSEPWDAEILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...TTCTGCATCCCAGGGCTCTGACGAAGGCGTTAAGAAACAGATGCTGTTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GAGGCTTCCAGAAATCCCGGTACTCCTCCTCCCTCTCCCACCTTTACAGATGCTATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: EASRNPGTPPPSPTFTDAILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...AGCATCTGTAAAGGTGGGAGAGGGAGGAGGAGTACCGGGATTTCTGGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCATCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPSWMVE*YLKIEK
Trigger: CTTCTCAATCTTGAGATACAACTCCACCATCCAGGA...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTTGAAGTCGATGAGATaGACCTGCACCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLLKSMR*TCTSRR
Trigger: CCTCCGGGAGGTGCAGGTCAATCTCATCGACTTCAA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp AGTGAGGGTCAGAGAAGCAAGAATTCCCAGCTCTTCCTTGGGCTCTGGGCTCCAAGAACTTCTGTCACTTaGGTGTACACACCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SEGQRSKNSQLFLGLWAPRTSVT*VYTPGL
Trigger: CAAACCTGGTGTGTACACCAAAGTGACAGAAGTTCT...TGGAGCCCAGAGCCCAAGGAAGAGCTGGGAATTCTTGCTTCTCTGACCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ACTGGCCACAATCCAAGAAGAAGAACATCTTACGGGAACACTGGAGAGAGATATTGCCAAACACCTCCCTaGGAGGAGTGCTGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TGHNPRRRTSYGNTGERYCQTPP*EECCPS
Trigger: AGAGGGGCAGCACTCCTCCAAGGGAGGTGTTTGGCA...ATATCTCTCTCCAGTGTTCCCGTAAGATGTTCTTCTTCTTGGATTGTGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGCAGCTGAAGGTGTTCTaGCTGGAGATGCATTCCCGT +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLQLKVF*LEMHSR
Trigger: ACGGGAATGCATCTCCAGCAAGAACACCTTCAGCTG...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTCAGCGAACAGCGTGCTaGGGACAGCTCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: IKISTQALTPSSICNVRCQRTAC*GQLSLC
Trigger: GCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTG...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp AGAAAAGCAGGGAAAGAAACACAGACAGCTGGGATTGACCCCAGGCATCACATTCACAGACAGCTGGGATaGACCCCAGGCATCACATTT +
Preference number: 5 (lower is better)
Translates to: RKAGKETQTAGIDPRHHIHRQLG*TPGITF
Trigger: AAATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTG...AATGTGATGCCTGGGGTCAATCCCAGCTGTCTGTGTTTCTTTCCCTGCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGAATGTGGCCTCCTTCCCAGTCTTGCTAACATTCCCCAGTGTTGGTTTCTGAAAAACTaGGGAGAGTGGCAATGCACA +
Preference number: 5 (lower is better)
Translates to: CCRQECGLLPSLANIPQCWFLKN*GEWQCT
Trigger: TGTGCATTGCCACTCTCCCAAGTTTTTCAGAAACCA...ACACTGGGGAATGTTAGCAAGACTGGGAAGGAGGCCACATTCCTGTCTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TCAAAAAGACTAAAACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCAAGGAGAAGATCCATCTaGGTCCCTGGCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SKRLKQTELGKAMKSGFPRRRSI*VPGFSG
Trigger: GCCTGAGAAGCCAGGGACCAAGATGGATCTTCTCCT...TGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGTTTTAGTCTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430170.6
CDS-3UTR CAA 90 bp CCTGTAGGTCCACCCTTTTTCAACCCGCTGAGCTCTGTTCTGAGGGAAGAAAAGATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: PVGPPFFNPLSSVLREEKILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...CTTTTCTTCCCTCAGAACAGAGCTCAGCGGGTTGAAAAAGGGTGGACCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS-3UTR CAA 90 bp CTTTTAGCTGGCGAGTCCAGGCACGTTGATGATTTGCAGGAACAGGGCCAACTTATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: LLAGESRHVDDLQEQGQLILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...AAGTTGGCCCTGTTCCTGCAAATCATCAACGTGCCTGGACTCGCCAGCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITCGQPR*SGEHSR
Trigger: TCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATCCAGCAGGTCTCATaGAGGCTAAAGGTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLIQQVS*RLKVCP
Trigger: TGGACAGACCTTTAGCCTCAATGAGACCTGCTGGAT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp AACATCTTACGGGAACACTGGAGAGAGATATACCGCTGGGAAGGGCATTCAGACATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: NILREHWREIYRWEGHSDILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...GTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCGTAAGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS-3UTR CAA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCATTCCAGCCTGGGATTTaGAGAAGAGTTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPFQPGI*RRVDSS
Trigger: AGAGCTGTCAACTCTTCTCAAAATCCCAGGCTGGAA...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp TCCATCTATGGACACTCCTGTAGGAACATCCACGGTACTCAACTCTTGTCTCCACACGGTACTCAACTCTaGTCTCCAGGTAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: SIYGHSCRNIHGTQLLSPHGTQL*SPGNFQ
Trigger: CTGGAAATTACCTGGAGACAAGAGTTGAGTACCGTG...TGGAGACAAGAGTTGAGTACCGTGGATGTTCCTACAGGAGTGTCCATAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATTTTAAGCAGAGACTaGTCCCAGTCAAACCTCACG +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLILSRD*SQSNLT
Trigger: CGTGAGGTTTGACTGGGACAAGTCTCTGCTTAAAAT...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp ACAAACAGAGCTGGGAAAGGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGTCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: TNRAGKGHEERIPMHKCLSWMVE*YLKIEK
Trigger: CTTCTCAATCTTGAGATACAACTCCACCATCCAGGA...CAAGCATTTATGCATGGGAATCCGCTCTTCATGGCCTTTCCCAGCTCTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACATCTGTCTCCCTGGTCTaGCCAAAGCCTGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITSVSLV*PKPVIQ
Trigger: CTGGATCACAGGCTTTGGCAAGACCAGGGAGACAGA...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGCCAGGTACCAGCGGTaGTTCTGCTCACAGACAAGA +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITARYQR*FCSQTR
Trigger: TCTTGTCTGTGAGCAGAACAACCGCTGGTACCTGGC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp ATTAAGATCAGTACCCAAGCCCTGACTCCGTCATCAATTTGTAATGTGAGATGTTTTTCGGGACCCACCTaGGCTATCCTTCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: IKISTQALTPSSICNVRCFSGPT*AILPLL
Trigger: CAGCAGAGGAAGGATAGCCAAGGTGGGTCCCGAAAA...ACATCTCACATTACAAATTGATGACGGAGTCAGGGCTTGGGTACTGATCTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATC +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITEVQTH*PRPLAI
Trigger: GATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTC...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAAAGATTGAGAAGCTGTaGGCAAAATCCCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITKIEKL*AKSLWA
Trigger: TGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS-3UTR CAA 90 bp GGCCATGAAGAGCGGATTCCCATGCATAAATGCTTGATAACAAAAACTATCACAAGAACTTCTGTCACTTaGGTGTACACACCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: GHEERIPMHKCLITKTITRTSVT*VYTPGL
Trigger: CAAACCTGGTGTGTACACCAAAGTGACAGAAGTTCT...TGTGATAGTTTTTGTTATCAAGCATTTATGCATGGGAATCCGCTCTTCATGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430170.6
ENST00000445164.6
CDS CCA 72 bp CCGAGGCCAGCGCCCCTCCCACGATCCGCCCGGTCATaGCCCTCAGTCCGCAGTGGGAACACTGGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: PRPAPLPRSARS*PSVRSGNTGER
Trigger: TCTCTCTCCAGTGTTCCCACTGCGGACTGAGGGCCATGACCGGGCGGATCGTGGGAGGGGCGCTGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 72 bp GCAATGAGGAGGAGCACGCACCCGATGAGCGGTAGCTaGTTCTGGCCCTCCCGCCAGGTGAACTTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AMRRSTHPMSGS*FWPSRQVNLGR
Trigger: CCTGCCCAAGTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCCTCCTCATTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
CDS GCA 72 bp TGGTGCCGAAGTGCAGACTCACTTGCCAAGGCCACTTaGTATCCGAGGCCAGCGCCCCTCCCACGATCCGCC +
Preference number: 6 (lower is better)
Translates to: WCRSADSLAKAT*YPRPAPLPRSA
Trigger: GGCGGATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 72 bp CGGCAATGGAGGCTGCCTCAGGCAACTGGTGCAGGTTaGTGGTGCCCGCGTACACCTTCCAGCCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: RQWRLPQATGAG*WCPRTPSSPPG
Trigger: TCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp TGGGCAGGCTCGTACCTGGGCTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGGCAGGAGATGATCGGA +
Preference number: 6 (lower is better)
Translates to: WAGSYLGSPWWP*LLVLTWQEMIG
Trigger: TCCGATCATCTCCTGCCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGAGCCCAGGTACGAGCCTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
CDS CCA 72 bp AGGAGGAGCACGCACCCGATGAGCGGTAGCTGCTTCTaGCCCTCCCGCCAGGTGAACTTGGGCAGGCTCGTA +
Preference number: 6 (lower is better)
Translates to: RRSTHPMSGSCF*PSRQVNLGRLV
Trigger: TACGAGCCTGCCCAAGTTCACCTGGCGGGAGGGCCAGAAGCAGCTACCGCTCATCGGGTGCGTGCTCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
CDS CAA 72 bp GTGGTGCCGAAGTGCAGACTCACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCCCCTCCCACGATCCGC +
Preference number: 6 (lower is better)
Translates to: VVPKCRLTCQGH*LSEASAPPTIR
Trigger: GCGGATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 72 bp TCGGCAATGGAGGCTGCCTCAGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACCTTCCAGCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SAMEAASGNWCR*LVPAYTFQPSR
Trigger: CCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 90 bp CAGATGTGGGTGGTGCCGAAGTGCAGACTCACTTGCCAAGGCCACTaGCTATCCGAGGCCAGCGCCCCTCCCACGATCCGCCCGGTCATG +
Preference number: 6 (lower is better)
Translates to: QMWVVPKCRLTCQGH*LSEASAPPTIRPVM
Trigger: CATGACCGGGCGGATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS GCA 72 bp TGGAGGCTGCCTCAGGCAACTGGTGCAGGTTGCTGGTaGCCGCGTACACCTTCCAGCCCTCCAGGACCTTCT +
Preference number: 6 (lower is better)
Translates to: WRLPQATGAGCW*PRTPSSPPGPS
Trigger: AGAAGGTCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp CTGACCTGGCGGATGATGACCTGCCGGATGAGGACCTaGAAAGTGATGCCAGAGCCGGAGATGCCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LTWRMMTCRMRT*KVMPEPEMPGL
Trigger: CAGCCCGGGCATCTCCGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCAGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp CAATGGAGGCTGCCTCAGGCAACTGGTGCAGGTTGCTaGTGCCCGCGTACACCTTCCAGCCCTCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: QWRLPQATGAGC*CPRTPSSPPGP
Trigger: AGGTCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp CCTGCCAGAACTGGACTGGGCTCTCCCTGGTGGCCCTaGTTGCTGGTGCTGACCTGGCAGGAGATGATCGGA +
Preference number: 6 (lower is better)
Translates to: PARTGLGSPWWP*LLVLTWQEMIG
Trigger: TCCGATCATCTCCTGCCAGGTCAGCACCAGCAACCAGGGCCACCAGGGAGAGCCCAGTCCAGTTCTGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528626.5
CDS CAA 90 bp GAGCGTGCCTCCACAGATGTGGGTGGTGCCGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATCCGAGGCCAGCGCCCCTCCCACGAT +
Preference number: 6 (lower is better)
Translates to: ERASTDVGGAEVQTH*PRPLAIRGQRPSHD
Trigger: ATCGTGGGAGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTGTGGAGGCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 90 bp CCGTCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTGCTCCTaGTACCTGATCCCTGTGTGGCCCTGCCAGAACTGGACCCGTGGC +
Preference number: 6 (lower is better)
Translates to: PSQRTACLGQLSLCS*YLIPVWPCQNWTRG
Trigger: GCCACGGGTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528135.1
CDS TCA 72 bp CCTCACCGGACAGGGTCAGGGGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGTCCTCCTCATCGGTGT +
Preference number: 6 (lower is better)
Translates to: PHRTGSGAWTAA*GRCHSRPPHRC
Trigger: ACACCGATGAGGAGGACGACTATGACATCGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTCCGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS GCA 72 bp CCACAGATGTGGGTGGTGCCGAAGTGCAGACTCACTTaGCAAGGCCACTTGCTATCCGAGGCCAGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: PQMWVVPKCRLT*QGHLLSEASAP
Trigger: AGGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp CTCCAGGGTCCCCACCTGAGGAAGTTCCCAGCCTGCTaGGTGCAGTGTCCTGCTGCAGGGATCTTACCTCCA +
Preference number: 6 (lower is better)
Translates to: LQGPHLRKFPAC*VQCPAAGILPP
Trigger: TGGAGGTAAGATCCCTGCAGCAGGACACTGCACCCAGCAGGCTGGGAACTTCCTCAGGTGGGGACCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445164.6
CDS CAA 72 bp TCCACAGATGTGGGTGGTGCCGAAGTGCAGACTCACTaGCCAAGGCCACTTGCTATCCGAGGCCAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: STDVGGAEVQTH*PRPLAIRGQRP
Trigger: GGGGCGCTGGCCTCGGATAGCAAGTGGCCTTGGCAAGTGAGTCTGCACTTCGGCACCACCCACATCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 90 bp ATGATGATCTCGGCAATGGAGGCTGCCTCAGGCAACTGGTGCAGGTaGCTGGTGCCCGCGTACACCTTCCAGCCCTCCAGGACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: MMISAMEAASGNWCR*LVPAYTFQPSRTFS
Trigger: GGAGAAGGTCCTGGAGGGCTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGATCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS TCA 72 bp TGTGAGCGGACAGGGTCAGGGGCTTGGACAGCCGCATaGGGGCGATGTCATAGTCGTCCTCCTCATCGGTGT +
Preference number: 6 (lower is better)
Translates to: CERTGSGAWTAA*GRCHSRPPHRC
Trigger: ACACCGATGAGGAGGACGACTATGACATCGCCCTCATGCGGCTGTCCAAGCCCCTGACCCTGTCCGCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000528626.5
CDS GCA 72 bp AGGTTGTCACCGAGGCTGACCTGGCGGATGATGACCTaGCGGATGAGGACCTGGAAAGTGATGCCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: RLSPRLTWRMMT*RMRTWKVMPEP
Trigger: CGGCTCTGGCATCACTTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
ENST00000528626.5
CDS GCA 72 bp TCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTaGTCCTTGTACCTGATCCCTGTGTGGCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SQRTACLGQLSL*SLYLIPVWPCQ
Trigger: CTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS GCA 72 bp AGCTTGCAGTCCACCACCCCGTCACAGCGAACAGCGTaGTTGGGACAGCTCTCCCTCTGCTCCTTGTACCTG +
Preference number: 6 (lower is better)
Translates to: SLQSTTPSQRTA*LGQLSLCSLYL
Trigger: CAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGTGGACTGCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS GCA 72 bp CAAACCTCACGCAGCCCAGCTCGTCACTCTTCAGCTTaGAGTCCACCACCCCGTCACAGCGAACAGCGTGCT +
Preference number: 6 (lower is better)
Translates to: QTSRSPARHSSA*SPPPRHSEQRA
Trigger: AGCACGCTGTTCGCTGTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACGAGCTGGGCTGCGTGAGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS CAA 72 bp TCAAACCTCACGCAGCCCAGCTCGTCACTCTTCAGCTaGCAGTCCACCACCCCGTCACAGCGAACAGCGTGC +
Preference number: 6 (lower is better)
Translates to: SNLTQPSSSLFS*QSTTPSQRTAC
Trigger: GCACGCTGTTCGCTGTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACGAGCTGGGCTGCGTGAGGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS CAA 90 bp CCGTCACAGCGAACAGCGTGCTTGGGACAGCTCTCCCTCTGCTCCTaGTACCTGATCCCTGTGTGGCCCTGCCAGAACTGGAAGAGGATG +
Preference number: 6 (lower is better)
Translates to: PSQRTACLGQLSLCS*YLIPVWPCQNWKRM
Trigger: CATCCTCTTCCAGTTCTGGCAGGGCCACACAGGGATCAGGTACAAGGAGCAGAGGGAGAGCTGTCCCAAGCACGCTGTTCGCTGTGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
CDS CAA 90 bp TTGTCCCAGTCAAACCTCACGCAGCCCAGCTCGTCACTCTTCAGCTaGCAGTCCACCACCCCGTCACAGCGAACAGCGTGCTTGGGACAG +
Preference number: 6 (lower is better)
Translates to: LSQSNLTQPSSSLFS*QSTTPSQRTACLGQ
Trigger: CTGTCCCAAGCACGCTGTTCGCTGTGACGGGGTGGTGGACTGCAAGCTGAAGAGTGACGAGCTGGGCTGCGTGAGGTTTGACTGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528135.1
ENST00000528626.5
CDS GCA 72 bp GCCAGTCACCATGGCCAGAGTCTTCACAGCAGCCGGTaGTGTGCAGAGCAGCAGGCCAGCTGGTTAGGATTT +
Preference number: 6 (lower is better)
Translates to: ASHHGQSLHSSR*CAEQQASWLGF
Trigger: AAATCCTAACCAGCTGGCCTGCTGCTCTGCACAGCACCGGCTGCTGTGAAGACTCTGGCCATGGTGACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524993.6
ENST00000528626.5
CDS CCA 72 bp ACACTCTGGTTGGGGAGGTTGTCACCGAGGCTGACCTaGCGGATGATGACCTGCCGGATGAGGACCTGGAAA +
Preference number: 6 (lower is better)
Translates to: TLWLGRLSPRLT*RMMTCRMRTWK
Trigger: TTTCCAGGTCCTCATCCGGCAGGTCATCATCCGCCAGGTCAGCCTCGGTGACAACCTCCCCAACCAGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000525794.1
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp ATGATGATCTCGGCAATGGAGGCTGCCTCAGGCAACTaGTGCAGGTTGCTGGTGCCCGCGTACACCTTCCAG +
Preference number: 6 (lower is better)
Translates to: MMISAMEAASGN*CRLLVPAYTFQ
Trigger: CTGGAAGGTGTACGCGGGCACCAGCAACCTGCACCAGTTGCCTGAGGCAGCCTCCATTGCCGAGATCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 72 bp AGAAGCTGTTGGCAAAATCCCTGTGGGCAACCTCGGTaGTCCGGTGAGCACTCTCGAAACCCAGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RSCWQNPCGQPR*SGEHSRNPAAG
Trigger: GCCAGCAGCTGGGTTTCGAGAGTGCTCACCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAACAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp AGTCCGCAGTGGGAACACTGGAGAGAGATATACCGCTaGGAAGGGCATTCAGACCTGTGGAGGCTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SPQWEHWREIYR*EGHSDLWRLSW
Trigger: CCAGGAAAGCCTCCACAGGTCTGAATGCCCTTCCCAGCGGTATATCTCTCTCCAGTGTTCCCACTGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS TCA 72 bp AGCACTCTCGAAACCCAGCTGCTGGCAGGTCTTCTCTaGGTAGGAGTCATTCCAGTTGCTGCTACAGATGGG +
Preference number: 6 (lower is better)
Translates to: STLETQLLAGLL*VGVIPVAATDG
Trigger: CCCATCTGTAGCAGCAACTGGAATGACTCCTACTCAGAGAAGACCTGCCAGCAGCTGGGTTTCGAGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CAA 72 bp AGGAAGGGGGATGTCTTGTCATCTGTCTCCCTGGTCTaGCCAAAGCCTGTGATCCAGCAGGTCTCATTGAGG +
Preference number: 6 (lower is better)
Translates to: RKGDVLSSVSLV*PKPVIQQVSLR
Trigger: CCTCAATGAGACCTGCTGGATCACAGGCTTTGGCAAGACCAGGGAGACAGATGACAAGACATCCCCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000528626.5
CDS CAA 90 bp TGGGAAGGGCATTCAGACCTGTGGAGGCTTTCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAGCTGTTGGCAAAATCCCTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: WEGHSDLWRLSWMVE*YLKIEKLLAKSLWA
Trigger: TGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTTGAGATACAACTCCACCATCCAGGAAAGCCTCCACAGGTCTGAATGCCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp GGATGGTGGAGTTGTATCTCAAGATTGAGAAGCTGTTaGCAAAATCCCTGTGGGCAACCTCGGTTGTCCGGT +
Preference number: 6 (lower is better)
Translates to: GWWSCISRLRSC*QNPCGQPRLSG
Trigger: ACCGGACAACCGAGGTTGCCCACAGGGATTTTGCCAACAGCTTCTCAATCTTGAGATACAACTCCACCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS TCA 72 bp ACAGAAGTGTTCCATGTAAGGATCTTTAAGAGTCTTTaGCTTCTGCCCTGCAGAAGCTTTGGGGCCCGGATA +
Preference number: 6 (lower is better)
Translates to: TEVFHVRIFKSL*LLPCRSFGARI
Trigger: TATCCGGGCCCCAAAGCTTCTGCAGGGCAGAAGTCAAAGACTCTTAAAGATCCTTACATGGAACACTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS CAA 72 bp CATTCAGACCTGTGGAGGCTTTCCTGGATGGTGGAGTaGTATCTCAAGATTGAGAAGCTGTTGGCAAAATCC +
Preference number: 6 (lower is better)
Translates to: HSDLWRLSWMVE*YLKIEKLLAKS
Trigger: GGATTTTGCCAACAGCTTCTCAATCTTGAGATACAACTCCACCATCCAGGAAAGCCTCCACAGGTCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430170.6
ENST00000445164.6
ENST00000524993.6
ENST00000526090.1
ENST00000528626.5
CDS CCA 72 bp ACTCCGTCATCAATTTGTAATGTGAGATGTGTCATTTaGAGCAAACTTATTTATAACCCTTGGGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: TPSSICNVRCVI*SKLIYNPWASV
Trigger: AACTGAAGCCCAAGGGTTATAAATAAGTTTGCTCCAAATGACACATCTCACATTACAAATTGATGACGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526090.1
CDS CCA 72 bp AGATGTGTCATTTGGAGCAAACTTATTTATAACCCTTaGGCTTCAGTTTCCCTAATTATAAAACAGAAGTGT +
Preference number: 6 (lower is better)
Translates to: RCVIWSKLIYNP*ASVSLIIKQKC
Trigger: ACACTTCTGTTTTATAATTAGGGAAACTGAAGCCCAAGGGTTATAAATAAGTTTGCTCCAAATGACACATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526090.1