Pregenerated sensors for TMPRSS12 (Homo sapiens)
Ensembl gene IDs: ENSG00000186452Ensembl transcript IDs: ENST00000398458.4, ENST00000551456.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGCATGGAAGAAATGCTCTGTCAGCCACTTTTGGTAGAAGGATaGCCCAATATAGACACCAGGAAAACCTCTTCGACCACAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: ACMEEMLCQPLLVEG*PNIDTRKTSSTTAM Trigger: CATGGCTGTGGTCGAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGACAGAGCATTTCTTCCATGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR CCA 90 bp | CTTTTAGGCACGTGTGTGGTTTGCTTGCCAGGGAGAGGAGTAAACTaGCATCTTGCAATAGAAGACAAGTTTCTAAGTGTTGACAATAGC | + |
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Preference number: 1 (lower is better) Translates to: LLGTCVVCLPGRGVN*HLAIEDKFLSVDNS Trigger: GCTATTGTCAACACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAAGCAAACCACACACGTGCCTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCGGGATGAGAATCGCTTaGACCTGGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SATFGRRMAQYRHQENLFGMRIA*TWEAEV Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTCATCCC...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCAGAATATTCTCTTGCTaGATACTGCGTGTGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SATFGRRMAQYRHQENLFRIFSC*ILRVER Trigger: CCTTTCCACACGCAGTATTCAGCAAGAGAATATTCT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTGCACTCCAGCATGGGTaGCAAAGCGAGACTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLALQHG*QSETIS Trigger: TGAGATAGTCTCGCTTTGTCACCCATGCTGGAGTGC...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCTTTCAAGGAGACATGTaGTTCAGTGCCAAAATTACA | + |
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Preference number: 2 (lower is better) Translates to: SATFGRRMAQYRHQENLFFQGDM*FSAKIT Trigger: TGTAATTTTGGCACTGAATCACATGTCTCCTTGAAA...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR GCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTCAGAGATTGTGTCACTaGACTCCAGCATGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLQRLCH*TPAWVT Trigger: TGTCACCCATGCTGGAGTGCAGTGACACAATCTCTG...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCGATAAATTTCTCATCTaGCTGGTTTTGAGCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SATFGRRMAQYRHQENLFDKFLI*LVLSQN Trigger: ATTCTGGCTCAAAACCAGGCAGATGAGAAATTTATC...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCGAAAATGAGCATAAATaGCAAAGCCTCTCAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: SATFGRRMAQYRHQENLFENEHK*QSLSVV Trigger: TACTACTGAGAGGCTTTGCCATTTATGCTCATTTTC...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR CAA 90 bp | ATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTaGCTTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ITLRCMKDSFRHVCG*LARERSKLASCNRR Trigger: TCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTTGGGTTACTCAGGAGTaGAGGACTAGTAGCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLWVTQE*RTSSFG Trigger: TCCAAAGCTACTAGTCCTTCACTCCTGAGTAACCCA...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTATGAGTAGGAAAAGGTaGGAGCATGGGTTACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLMSRKR*EHGLLR Trigger: CCTGAGTAACCCATGCTCTCACCTTTTCCTACTCAT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTAAACAACAAGGACACTaGGATAACTGTTTCCGATTC | + |
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Preference number: 2 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSKQQGH*DNCFRF Trigger: GAATCGGAAACAGTTATCTCAGTGTCCTTGTTGTTT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTGGGAGAGGAGTAAACTaGCATCTTGCAATAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLGRGVN*HLAIED Trigger: GTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCC...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTGATGATGAGGATGTTTaGCCTAGGAATGCAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLDDEDV*PRNAIH Trigger: GTGAATTGCATTCCTAGGCCAAACATCCTCATCATC...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR GCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTATTCAAGGTAAATTCTaGCTACTGATGACAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RITLRCMKDSFRHVCGLLIQGKF*LLMTAE Trigger: TTCTGCTGTCATCAGTAGGCAGAATTTACCTTGAAT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCACGTGTGTGGTTTGCTaGCCAGGGAGAGGAGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SATFGRRMAQYRHQENLFTCVVC*PGRGVN Trigger: GTTTACTCCTCTCCCTGGCAAGCAAACCACACACGT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCTGCAGTGAACAGAGATaGTGTCACTGCACTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SATFGRRMAQYRHQENLFCSEQR*CHCTPA Trigger: TGCTGGAGTGCAGTGACACAATCTCTGTTCACTGCA...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR CCA 72 bp | GAAGAAATGCTCTGTCAGCCACTTTTGGTAGAAGGATaGCCCAATATAGACACCAGGAAAACCTCTTCGACC | + |
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Preference number: 3 (lower is better) Translates to: EEMLCQPLLVEG*PNIDTRKTSST Trigger: GGTCGAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGACAGAGCATTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CAA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTAGGGATGAGAATCGCTaGAACCTGGGAGGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: RITLRCMKDSFRHVCGLLRDENR*NLGGRG Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTCATCCCT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCATTTTACCCAGGTATTaGGAGGAACCATATAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SATFGRRMAQYRHQENLFILPRY*EEPYSW Trigger: CCAGCTATATGGTTCCTCCAAATACCTGGGTAAAAT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR CCA 72 bp | ACGTGTGTGGTTTGCTTGCCAGGGAGAGGAGTAAACTaGCATCTTGCAATAGAAGACAAGTTTCTAAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: TCVVCLPGRGVN*HLAIEDKFLSV Trigger: AACACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAAGCAAACCACACACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCCGGACGGCCTCAGCCTaGTGGGAACTAGCCGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFRTASA*WELAAG Trigger: ACCGGCGGCTAGTTCCCAGCAGGCTGAGGCCGTCCG...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTACGGCCTCAGCCTGCTaGGAACTAGCCGCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSTASAC*ELAAGS Trigger: GGAACCGGCGGCTAGTTCCCAGCAGGCTGAGGCCGT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCTGTTCCACAATCCTCTaGATGCGCCCCTCCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFCSTIL*MRPSLP Trigger: AGGGAGGGAGGGGCGCATGCAGAGGATTGTGGAACA...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTCACCACCCACGGCCATaGGCCAGCTTGTGCTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSHHPRP*ASLCFG Trigger: ACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTG...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCGCCCCAGCCGCATTTTaGAGGCTGGTGAGCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFAPAAF*RLVSKM Trigger: CATCTTGCTCACCAGCCTCCAAAATGCGGCTGGGGC...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTGCAGTGGGCAGCTGTaGGGACCCACCTCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSCSGQL*GPTSLS Trigger: TGAGAGAGAGGTGGGTCCTCACAGCTGCCCACTGCA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCCCATGCGCCAGCTTGTaGTTCGGTGCCCCCTATAAT | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFPCASL*FGAPYN Trigger: ATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGG...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTCATTTTGGAGGCTGGTaGGCAAGATGGCGGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSHFGGW*ARWRQV Trigger: TACCTGCCGCCATCTTGCTCACCAGCCTCCAAAATG...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCCACATCCTTAAGCGGTaGTGTTCCACAATCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFHILKR*CSTILC Trigger: GCAGAGGATTGTGGAACAGCACCGCTTAAGGATGTG...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCTGGTCTGAGTATAAGTaGGAGCTCCCCACAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFWSEYK*ELPTNN Trigger: GTTGTTTGTGGGGAGCTCTCACTTATACTCAGACCA...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGCACTCCAGCATGGGTaGCAAAGCGAGACTATCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSALQHG*QSETIS Trigger: TGAGATAGTCTCGCTTTGTCACCCATGCTGGAGTGC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| 3UTR CAA 72 bp | AGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTaGCTTGCCAGGGAGAGGAGTAAACTGGCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RCMKDSFRHVCG*LARERSKLASC Trigger: GCAAGATGCCAGTTTACTCCTCTCCCTGGCAAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTCAGAGATTGTGTCACTaGACTCCAGCATGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSQRLCH*TPAWVT Trigger: TGTCACCCATGCTGGAGTGCAGTGACACAATCTCTG...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGTTCCCCCACATACATaGACAAGAACACGGCCATAT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSVPPHT*TRTRPY Trigger: ATATGGCCGTGTTCTTGTTCATGTATGTGGGGGAAC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTGGGTTACTCAGGAGTaGAGGACTAGTAGCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSWVTQE*RTSSFG Trigger: TCCAAAGCTACTAGTCCTTCACTCCTGAGTAACCCA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCCAAAACATAAAGCTATaGGGATCTGGCCACGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SATFGRRMAQYRHQENLFQNIKL*GSGHVK Trigger: TTTTACGTGGCCAGATCCTCATAGCTTTATGTTTTG...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTATAATCCGAGACCCTTaGAACACATCCTTAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSIIRDP*NTSLSG Trigger: ACCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTAT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGGGAGAGGAGTAAACTaGCATCTTGCAATAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSGRGVN*HLAIED Trigger: GTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGATGATGAGGATGTTTaGCCTAGGAATGCAATTCAC | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSDDEDV*PRNAIH Trigger: GTGAATTGCATTCCTAGGCCAAACATCCTCATCATC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTATAGTAAGTATGCCTTaGGTGCTTGCATGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSIVSMP*VLAWKK Trigger: TTTCTTCCATGCAAGCACTCAAGGCATACTTACTAT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTACTTGGTCTTACCCTaGAAGTATCAAAAGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSYLVLP*KYQKLH Trigger: ATGGAGCTTTTGATACTTGCAGGGTAAGACCAAGTA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTTTTACCCAGGTATTTaGAGGAACCATATAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSFYPGI*RNHIAG Trigger: ACCAGCTATATGGTTCCTCCAAATACCTGGGTAAAA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTATCAAAGGCCTTGTTTaGCAAGTTCCCTTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RITLRCMKDSFRHVCGLLIKGLV*QVPFWL Trigger: AAGCCAGAAGGGAACTTGTCAAACAAGGCCTTTGAT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTCTTGCATGGAAGAAATaGTCTGTCAGCCACTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RITLRCMKDSFRHVCGLLLAWKK*SVSHFW Trigger: CCAAAAGTGGCTGACAGAGCATTTCTTCCATGCAAG...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTATTCAAGGTAAATTCTaGCTACTGATGACAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSIQGKF*LLMTAE Trigger: TTCTGCTGTCATCAGTAGGCAGAATTTACCTTGAAT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGATAAATTTCTCATCTaGCTGGTTTTGAGCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSDKFLI*LVLSQN Trigger: ATTCTGGCTCAAAACCAGGCAGATGAGAAATTTATC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTCTTTTGGTAGAAGGATaGCCCAATATAGACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RITLRCMKDSFRHVCGLLLLVEG*PNIDTR Trigger: CCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAG...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTGAAAATGAGCATAAATaGCAAAGCCTCTCAGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSENEHK*QSLSVV Trigger: TACTACTGAGAGGCTTTGCCATTTATGCTCATTTTC...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTAGTAAACTGGCATCTTaGAATAGAAGACAAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSSKLAS*NRRQVS Trigger: AGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTAAACAACAAGGACACTaGGATAACTGTTTCCGATTC | + |
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Preference number: 4 (lower is better) Translates to: RITLRCMKDSFRHVCGLLKQQGH*DNCFRF Trigger: GAATCGGAAACAGTTATCTCAGTGTCCTTGTTGTTT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR TCA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTATCACCTGCACAAAATaGAGTGTTAGGAATTATTCC | + |
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Preference number: 4 (lower is better) Translates to: RITLRCMKDSFRHVCGLLITCTK*SVRNYS Trigger: GGAATAATTCCTAACACTTCATTTTGTGCAGGTGAT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS GCA 90 bp | CCTCCCTCCCTCCGCCGCCGGAGCCTCTTGCGGACGGCCTCAGCCTaGTGGGAACTAGCCGCCGGTTCCGGCGAGGGGCCGAGCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PPSLRRRSLLRTASA*WELAAGSGEGPSLC Trigger: GCACAGGCTCGGCCCCTCGCCGGAACCGGCGGCTAGTTCCCAGCAGGCTGAGGCCGTCCGCAAGAGGCTCCGGCGGCGGAGGGAGGGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CCA 90 bp | CCCTCCCTCCGCCGCCGGAGCCTCTTGCGGACGGCCTCAGCCTGCTaGGAACTAGCCGCCGGTTCCGGCGAGGGGCCGAGCCTGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: PSLRRRSLLRTASAC*ELAAGSGEGPSLCL Trigger: AAGGCACAGGCTCGGCCCCTCGCCGGAACCGGCGGCTAGTTCCCAGCAGGCTGAGGCCGTCCGCAAGAGGCTCCGGCGGCGGAGGGAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCCGCCGCCGGAGCCTCTaGCGGACGGCCTCAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SATFGRRMAQYRHQENLFRRRSL*RTASAC Trigger: GCAGGCTGAGGCCGTCCGCAAGAGGCTCCGGCGGCG...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS GCA 90 bp | AAGAACACGGCCATATTTAATCTGCAGGCTCACCACCCACGGCCATaGGCCAGCTTGTGCTTCGGTGCCCCCTATAATCCGAGACCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KNTAIFNLQAHHPRP*ASLCFGAPYNPRPL Trigger: CAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAGATTAAATATGGCCGTGTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS GCA 90 bp | CATGCGCCAGCTTGTGCTTCGGTGCCCCCTATAATCCGAGACCCTTaGAACACATCCTTAAGCGGTGCTGTTCCACAATCCTCTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: HAPACASVPPIIRDP*NTSLSGAVPQSSAC Trigger: GCATGCAGAGGATTGTGGAACAGCACCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS GCA 90 bp | ATATTTAATCTGCAGGCTCACCACCCACGGCCATGCGCCAGCTTGTaGTTCGGTGCCCCCTATAATCCGAGACCCTTGCAACACATCCTT | + |
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Preference number: 5 (lower is better) Translates to: IFNLQAHHPRPCASL*FGAPYNPRPLQHIL Trigger: AAGGATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAGATTAAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS TCA 90 bp | GCTGTGAGGACCCACCTCTCTCTCACTAGGGTTCCCCCACATACATaGACAAGAACACGGCCATATTTAATCTGCAGGCTCACCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: AVRTHLSLTRVPPHT*TRTRPYLICRLTTH Trigger: GTGGGTGGTGAGCCTGCAGATTAAATATGGCCGTGTTCTTGTTCATGTATGTGGGGGAACCCTAGTGAGAGAGAGGTGGGTCCTCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCAGCCCCAGCCGCATTTaGGAGGCTGGTGAGCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: SATFGRRMAQYRHQENLFSPSRI*EAGEQD Trigger: ATCTTGCTCACCAGCCTCCAAAATGCGGCTGGGGCT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCAGGGATGAGAATCGCTaGAACCTGGGAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SATFGRRMAQYRHQENLFRDENR*NLGGRG Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTCATCCCT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTCGGCCATGCGCCAGCTaGTGCTTCGGTGCCCCCTAT | + |
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Preference number: 5 (lower is better) Translates to: RITLRCMKDSFRHVCGLLRPCAS*CFGAPY Trigger: ATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCG...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCGTATGCCTTGAGTGCTaGCATGGAAGAAATGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SATFGRRMAQYRHQENLFVCLEC*HGRNAL Trigger: CAGAGCATTTCTTCCATGCAAGCACTCAAGGCATAC...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTACGTGTGTGGTTTGCTaGCCAGGGAGAGGAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSTCVVC*PGRGVN Trigger: GTTTACTCCTCTCCCTGGCAAGCAAACCACACACGT...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTCTCTGTCAGCCACTTTaGGTAGAAGGATGGCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSLCQPL*VEGWPN Trigger: ATTGGGCCATCCTTCTACCAAAAGTGGCTGACAGAG...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTATAATCCGAGACCCTaGCAACACATCCTTAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSYNPRP*QHILKR Trigger: CCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTATA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TTGCCAGGGAGAGGAGTAAACTGGCATCTTGCAATAGAAGACAAGTTTCTAAGTTATCAAAGGCCTTGTTaGACAAGTTCCCTTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LPGRGVNWHLAIEDKFLSYQRPC*TSSLLA Trigger: AGCCAGAAGGGAACTTGTCAAACAAGGCCTTTGATA...ACTTAGAAACTTGTCTTCTATTGCAAGATGCCAGTTTACTCCTCTCCCTGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | TCAGCCACTTTTGGTAGAAGGATGGCCCAATATAGACACCAGGAAAACCTCTTCAAGTTATCAAAGGCCTaGTTTGACAAGTTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SATFGRRMAQYRHQENLFKLSKA*FDKFPS Trigger: AGAAGGGAACTTGTCAAACAAGGCCTTTGATAACTT...GAAGAGGTTTTCCTGGTGTCTATATTGGGCCATCCTTCTACCAAAAGTGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTTGCAGTGAACAGAGATaGTGTCACTGCACTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RITLRCMKDSFRHVCGLLCSEQR*CHCTPA Trigger: TGCTGGAGTGCAGTGACACAATCTCTGTTCACTGCA...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTATTTTACCCAGGTATTaGGAGGAACCATATAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RITLRCMKDSFRHVCGLLILPRY*EEPYSW Trigger: CCAGCTATATGGTTCCTCCAAATACCTGGGTAAAAT...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS-3UTR CAA 90 bp | AGGATAACTTTAAGATGTATGAAGGATTCTTTTAGGCACGTGTGTGGTTTGCTTTATAGTAAGTATGCCTaGAGTGCTTGCATGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RITLRCMKDSFRHVCGLLYSKYA*SACMEE Trigger: TTCTTCCATGCAAGCACTCAAGGCATACTTACTATA...AAGCAAACCACACACGTGCCTAAAAGAATCCTTCATACATCTTAAAGTTATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551456.5 |
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| CDS GCA 72 bp | CTCCGCCGCCGGAGCCTCTTGCGGACGGCCTCAGCCTaGTGGGAACTAGCCGCCGGTTCCGGCGAGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LRRRSLLRTASA*WELAAGSGEGP Trigger: CGGCCCCTCGCCGGAACCGGCGGCTAGTTCCCAGCAGGCTGAGGCCGTCCGCAAGAGGCTCCGGCGGCGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS GCA 72 bp | CTGCAGGCTCACCACCCACGGCCATGCGCCAGCTTGTaGTTCGGTGCCCCCTATAATCCGAGACCCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LQAHHPRPCASL*FGAPYNPRPLQ Trigger: TTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CCA 72 bp | ACAACAGCGCCACGCTCAGGAGCCCCAGCCGCATTTTaGAGGCTGGTGAGCAAGATGGCGGCAGGTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: TTAPRSGAPAAF*RLVSKMAAGTS Trigger: GGAAGTACCTGCCGCCATCTTGCTCACCAGCCTCCAAAATGCGGCTGGGGCTCCTGAGCGTGGCGCTGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CAA 72 bp | AACAACAGCGCCACGCTCAGGAGCCCCAGCCGCATTTaGGAGGCTGGTGAGCAAGATGGCGGCAGGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: NNSATLRSPSRI*EAGEQDGGRYF Trigger: GAAGTACCTGCCGCCATCTTGCTCACCAGCCTCCAAAATGCGGCTGGGGCTCCTGAGCGTGGCGCTGTTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CAA 72 bp | AATCTGCAGGCTCACCACCCACGGCCATGCGCCAGCTaGTGCTTCGGTGCCCCCTATAATCCGAGACCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NLQAHHPRPCAS*CFGAPYNPRPL Trigger: CAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS GCA 72 bp | GCCATATTTAATCTGCAGGCTCACCACCCACGGCCATaGGCCAGCTTGTGCTTCGGTGCCCCCTATAATCCG | + |
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Preference number: 6 (lower is better) Translates to: AIFNLQAHHPRP*ASLCFGAPYNP Trigger: CGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAGATTAAATATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CAA 90 bp | GCCATATTTAATCTGCAGGCTCACCACCCACGGCCATGCGCCAGCTaGTGCTTCGGTGCCCCCTATAATCCGAGACCCTTGCAACACATC | + |
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Preference number: 6 (lower is better) Translates to: AIFNLQAHHPRPCAS*CFGAPYNPRPLQHI Trigger: GATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGGCCGTGGGTGGTGAGCCTGCAGATTAAATATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CAA 90 bp | CCATGCGCCAGCTTGTGCTTCGGTGCCCCCTATAATCCGAGACCCTaGCAACACATCCTTAAGCGGTGCTGTTCCACAATCCTCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: PCASLCFGAPYNPRP*QHILKRCCSTILCM Trigger: CATGCAGAGGATTGTGGAACAGCACCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCTGGCGCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS GCA 72 bp | GCTTGTGCTTCGGTGCCCCCTATAATCCGAGACCCTTaGAACACATCCTTAAGCGGTGCTGTTCCACAATCC | + |
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Preference number: 6 (lower is better) Translates to: ACASVPPIIRDP*NTSLSGAVPQS Trigger: GGATTGTGGAACAGCACCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS CAA 72 bp | AGCTTGTGCTTCGGTGCCCCCTATAATCCGAGACCCTaGCAACACATCCTTAAGCGGTGCTGTTCCACAATC | + |
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Preference number: 6 (lower is better) Translates to: SLCFGAPYNPRP*QHILKRCCSTI Trigger: GATTGTGGAACAGCACCGCTTAAGGATGTGTTGCAAGGGTCTCGGATTATAGGGGGCACCGAAGCACAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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| CDS TCA 72 bp | ACCCACCTCTCTCTCACTAGGGTTCCCCCACATACATaGACAAGAACACGGCCATATTTAATCTGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: THLSLTRVPPHT*TRTRPYLICRL Trigger: GAGCCTGCAGATTAAATATGGCCGTGTTCTTGTTCATGTATGTGGGGGAACCCTAGTGAGAGAGAGGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398458.4 ENST00000551456.5 |
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