RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMOD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136842

Ensembl transcript IDs: ENST00000259365.9, ENST00000375175.1, ENST00000395211.6

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTaGGCCATGTGCAGCCTCAGTGGACACTCTTCCATAGCGCTGAGG +
Preference number: 1 (lower is better)
Translates to: RSQMGMVVPATWCHS*AMCSLSGHSSIALR
Trigger: CCTCAGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 90 bp CCACACAGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTCAGTAAGATCTGCTGGTTTGGGGGC +
Preference number: 1 (lower is better)
Translates to: PHSKAIETGLLGLSR*CWNIIFSKICWFGG
Trigger: GCCCCCAAACCAGCAGATCTTACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 90 bp CACAGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGTAAGATCTGCTGGTTTGGGGGCTTC +
Preference number: 1 (lower is better)
Translates to: HSKAIETGLLGLSRC*WNIIFSKICWFGGF
Trigger: GAAGCCCCCAAACCAGCAGATCTTACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 90 bp GTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGCAGCCTCAGTGGACACTCTTCCATA +
Preference number: 1 (lower is better)
Translates to: VLRRSQMGMVVPATW*HSWAMCSLSGHSSI
Trigger: TATGGAAGAGTGTCCACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 90 bp AGTGTAATCATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGC +
Preference number: 1 (lower is better)
Translates to: SVIILGWFGQDFPIP*YLEFLHHCPASCGG
Trigger: GCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATGATTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CCA 90 bp CTATCATTTCTGCATATCCAGCAAAAGGAATCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGA +
Preference number: 1 (lower is better)
Translates to: LSFLHIQQKESHVDS*QSSVASVCLSVLRG
Trigger: TCCCCTCAGAACAGATAGACAGACTGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTTGCTGGATATGCAGAAATGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 90 bp TTGACTCCTGGCAGAGTTCAGTGGCTTCAGTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTGGATCCAGTAATCAATTTGGCAACT +
Preference number: 1 (lower is better)
Translates to: LTPGRVQWLQSVYLF*GENCVLDPVINLAT
Trigger: AGTTGCCAAATTGATTACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCACTGAACTCTGCCAGGAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 90 bp TTGAACAGCCACACCCATTCCTTTACACATGATCTATGGCAGAGTTaGATAGTTGCAACAGACACTATGTGGCCTGCAAAATCGGAAATT +
Preference number: 1 (lower is better)
Translates to: LNSHTHSFTHDLWQS*IVATDTMWPAKSEI
Trigger: AATTTCCGATTTTGCAGGCCACATAGTGTCTGTTGCAACTATTCAACTCTGCCATAGATCATGTGTAAAGGAATGGGTGTGGCTGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR GCA 90 bp CATAAATCCCAAATGTTCTTAAAGAACACTCAGGGACATGTTTGTTaGCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTGAAATT +
Preference number: 1 (lower is better)
Translates to: HKSQMFLKNTQGHVC*LGLVMKGWFLKLEI
Trigger: AATTTCAAGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTAAGAACATTTGGGATTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGC +
Preference number: 2 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTVPATW*HSWAMC
Trigger: GCACATGGCCCAGGAGTGGCACCATGTTGCAGGGAC...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACCAGCATTTTGCCTTCTaGTTTCCCCTGCAGAGCACA +
Preference number: 2 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHQHFAF*FPLQST
Trigger: TGTGCTCTGCAGGGGAAACCAGAAGGCAAAATGCTG...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACGAAGCCAAATGGGGATaGTTGTCCCTGCAACATGGT +
Preference number: 2 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHEAKWG*LSLQHG
Trigger: ACCATGTTGCAGGGACAACCATCCCCATTTGGCTTC...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR GCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACATTGTCCGGCATCCTaGGGAGGCTTAATATACAGG +
Preference number: 2 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTHCPAS*GGLIYR
Trigger: CCTGTATATTAAGCCTCCGCAGGATGCCGGACAATG...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACCTGAAGTCTCTAAGCTaGGCCATTACTAAATACCAT +
Preference number: 2 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHLKSLS*AITKYH
Trigger: ATGGTATTTAGTAATGGCCCAGCTTAGAGACTTCAG...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTC +
Preference number: 2 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSLGLSR*CWNIIF
Trigger: GAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTC +
Preference number: 2 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSLGLSR*CWNIIF
Trigger: GAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACATTCAGCGATGCAGAATaGAGCTGCAATTGTGTTTTA +
Preference number: 2 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTFSDAE*SCNCVL
Trigger: TAAAACACAATTGCAGCTGCATTCTGCATCGCTGAA...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR TCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTACACAGCAAGGCCATTaGAACTGGGCTCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSTQQGH*NWAPGA
Trigger: AGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGT...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCAGCATTTTGCCTTCTaGTTTCCCCTGCAGAGCACA +
Preference number: 2 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSQHFAF*FPLQST
Trigger: TGTGCTCTGCAGGGGAAACCAGAAGGCAAAATGCTG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CAA 90 bp CAGTGTAATCATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGG +
Preference number: 2 (lower is better)
Translates to: QCNHLGVVWPGFPNS*ISGVSSPLSGILRR
Trigger: CCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATGATTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCATGCTGCCAGCATTTTaGCTTCTGGTTTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: WGGLARISQFLDIWSFFTMLPAF*LLVSPA
Trigger: TGCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCAT...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTAAAAGGGTTTCATGCTaGCAGCATTTTGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSKRVSC*QHFAFW
Trigger: CCAGAAGGCAAAATGCTGGCAGCATGAAACCCTTTT...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCTCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLSHVDS*QSSVAS
Trigger: TGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGA...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSVYLF*GENCVL
Trigger: CAGAACACAATTTTCCCCTCAGAACAGATAGACAGA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCCCTGTACTGCCCACTaGCTTACAGTTCAGTGCGCA +
Preference number: 2 (lower is better)
Translates to: SLWELHISSVTFEPQFLDPCTAH*LTVQCA
Trigger: TGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTTACTTCAAAAGCATGTaGAAGAGTGTGCCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSYFKSM*KSVPFL
Trigger: CAGAAACGGCACACTCTTCCACATGCTTTTGAAGTA...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGCCATTTGCCCACTGTaGAATATAGAAAGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSAICPL*NIERCF
Trigger: AAAACACCTTTCTATATTGCACAGTGGGCAAATGGC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCATGTGCAGCCTCAGTaGACACTCTTCCATAGCGCT +
Preference number: 2 (lower is better)
Translates to: SLWELHISSVTFEPQFLDHVQPQ*TLFHSA
Trigger: AGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR TCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCCTTGTCCTTTATCATaGGATTTGCTGAAATCACTA +
Preference number: 2 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSPCPLS*DLLKSL
Trigger: TAGTGATTTCAGCAAATCTCATGATAAAGGACAAGG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCCCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 2 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCATGCTGCCAGCATTTTaGCTTCTGGTTTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPMLPAF*LLVSPA
Trigger: TGCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCAT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCGCCATTTGCCCACTGTaGAATATAGAAAGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLAICPL*NIERCF
Trigger: AAAACACCTTTCTATATTGCACAGTGGGCAAATGGC...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGC +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKVPATW*HSWAMC
Trigger: GCACATGGCCCAGGAGTGGCACCATGTTGCAGGGAC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACAGCATTTTGCCTTCTaGTTTCCCCTGCAGAGCACA +
Preference number: 2 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQQHFAF*FPLQST
Trigger: TGTGCTCTGCAGGGGAAACCAGAAGGCAAAATGCTG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCTACTTCAAAAGCATGTaGAAGAGTGTGCCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: WGGLARISQFLDIWSFFTYFKSM*KSVPFL
Trigger: CAGAAACGGCACACTCTTCCACATGCTTTTGAAGTA...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACCTGGCAGAGTTCAGTaGCTTCAGTCTGTCTATCTG +
Preference number: 2 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQPGRVQ*LQSVYL
Trigger: CAGATAGACAGACTGAAGCCACTGAACTCTGCCAGG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACACACAGCAAGGCCATTaGAACTGGGCTCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYTQQGH*NWAPGA
Trigger: AGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCATTTTAAATGCACTTaGAACACCACACAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSHFKCT*NTTQQG
Trigger: GCCTTGCTGTGTGGTGTTTCAAGTGCATTTAAAATG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLSVYLF*GENCVL
Trigger: CAGAACACAATTTTCCCCTCAGAACAGATAGACAGA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTC +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRLGLSR*CWNIIF
Trigger: GAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGCATGTGGAAGAGTGTaGCGTTTCTGTGTCACACAT +
Preference number: 2 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPACGRV*RFCVTH
Trigger: ATGTGTGACACAGAAACGGCACACTCTTCCACATGC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGGGGATGGTTGTCCCTaGAACATGGTGCCACTCCTG +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKGDGCP*NMVPLL
Trigger: CAGGAGTGGCACCATGTTGCAGGGACAACCATCCCC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCCTGGCAGAGTTCAGTaGCTTCAGTCTGTCTATCTG +
Preference number: 2 (lower is better)
Translates to: SGTCLLPGIGNERLVFETPGRVQ*LQSVYL
Trigger: CAGATAGACAGACTGAAGCCACTGAACTCTGCCAGG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAATCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQSHVDS*QSSVAS
Trigger: TGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGA...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGACATGGTGCCACTCCTaGGCCATGTGCAGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKTWCHS*AMCSLS
Trigger: ACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGT...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLDFPIP*YLEFLH
Trigger: GTGAAGAAACTCCAGATATCAAGGAATTGGGAAATC...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCAAAAGGGTTTCATGCTaGCAGCATTTTGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPKRVSC*QHFAFW
Trigger: CCAGAAGGCAAAATGCTGGCAGCATGAAACCCTTTT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAAAAAGGGTTTCATGCTaGCAGCATTTTGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQKRVSC*QHFAFW
Trigger: CCAGAAGGCAAAATGCTGGCAGCATGAAACCCTTTT...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAAGCCTCTCTGCTCAGTaGTCTGGAGTTCTTGACCTT +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRSLSAQ*SGVLDL
Trigger: AAGGTCAAGAACTCCAGAGCACTGAGCAGAGAGGCT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTGCAGTTTTCAGCGATaGAGAATGCAGCTGCAATTG +
Preference number: 2 (lower is better)
Translates to: SLWELHISSVTFEPQFLDCSFQR*RMQLQL
Trigger: CAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACATCTTGGGGTGGTTTaGCCAGGATTTCCCAATTCC +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRHLGVV*PGFPNS
Trigger: GGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CAA 90 bp CAGAGTTCAGTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATaGTGTTCTGGATCCAGTAATCAATTTGGCAACTTTAATCGAGGT +
Preference number: 2 (lower is better)
Translates to: QSSVASVCLSVLRGK*CSGSSNQFGNFNRG
Trigger: ACCTCGATTAAAGTTGCCAAATTGATTACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCACTGAACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCACAAAAGGGTTTCATaGTGCCAGCATTTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SGTCLLPGIGNERLVFETHKRVS*CQHFAF
Trigger: GAAGGCAAAATGCTGGCAGCATGAAACCCTTTTGTG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAGCATGTGGAAGAGTGTaGCGTTTCTGTGTCACACAT +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRACGRV*RFCVTH
Trigger: ATGTGTGACACAGAAACGGCACACTCTTCCACATGC...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCCAGGGACATGTTTGTTaGCTGGGATTGGTAATGAAA +
Preference number: 2 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPQGHVC*LGLVMK
Trigger: TTTCATTACCAATCCCAGGCAACAAACATGTCCCTG...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRSHVDS*QSSVAS
Trigger: TGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTATAGCCATGTTGATCTaGAAATTTATCCCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSIAMLI*KFIPLV
Trigger: CACTAGAGGGATAAATTTCCAGATCAACATGGCTAT...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCATTTTAAATGCACTTaGAACACCACACAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SGTCLLPGIGNERLVFETHFKCT*NTTQQG
Trigger: GCCTTGCTGTGTGGTGTTTCAAGTGCATTTAAAATG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: SGTCLLPGIGNERLVFETSVYLF*GENCVL
Trigger: CAGAACACAATTTTCCCCTCAGAACAGATAGACAGA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 2 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCCTGGCAGAGTTCAGTaGCTTCAGTCTGTCTATCTG +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKPGRVQ*LQSVYL
Trigger: CAGATAGACAGACTGAAGCCACTGAACTCTGCCAGG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACAGGGACATGTTTGTTaGCTGGGATTGGTAATGAAA +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRQGHVC*LGLVMK
Trigger: TTTCATTACCAATCCCAGGCAACAAACATGTCCCTG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCACAAAAGGGTTTCATaGTGCCAGCATTTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKHKRVS*CQHFAF
Trigger: GAAGGCAAAATGCTGGCAGCATGAAACCCTTTTGTG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCATTTTAAATGCACTTaGAACACCACACAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKHFKCT*NTTQQG
Trigger: GCCTTGCTGTGTGGTGTTTCAAGTGCATTTAAAATG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR TCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACCTTGTCCTTTATCATaGGATTTGCTGAAATCACTA +
Preference number: 2 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRPCPLS*DLLKSL
Trigger: TAGTGATTTCAGCAAATCTCATGATAAAGGACAAGG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCAGGGACATGTTTGTTaGCTGGGATTGGTAATGAAA +
Preference number: 2 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYQGHVC*LGLVMK
Trigger: TTTCATTACCAATCCCAGGCAACAAACATGTCCCTG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCTGAAGTCTCTAAGCTaGGCCATTACTAAATACCAT +
Preference number: 2 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKLKSLS*AITKYH
Trigger: ATGGTATTTAGTAATGGCCCAGCTTAGAGACTTCAG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 72 bp CCCTGGCCCCGCCTCCAGTTACCCTGTACTGCCCACTaGCTTACAGTTCAGTGCGCAGGCCTTCACCTTTTC +
Preference number: 3 (lower is better)
Translates to: PWPRLQLPCTAH*LTVQCAGLHLF
Trigger: GAAAAGGTGAAGGCCTGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGGTAACTGGAGGCGGGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 72 bp AGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGCAGCCTCAGTGGACAC +
Preference number: 3 (lower is better)
Translates to: RSQMGMVVPATW*HSWAMCSLSGH
Trigger: GTGTCCACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACCACTCAGGGACATGTTaGTTGCCTGGGATTGGTAAT +
Preference number: 3 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHHSGTC*LPGIGN
Trigger: ATTACCAATCCCAGGCAACAAACATGTCCCTGAGTG...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACTTCAGTGTAATCATCTaGGGGTGGTTTGGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHFSVII*GWFGQD
Trigger: ATCCTGGCCAAACCACCCCAAGATGATTACACTGAA...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR CCA 72 bp ATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTaGGCCATGTGCAGCCTCAGTGGACACTCTTCCATA +
Preference number: 3 (lower is better)
Translates to: MGMVVPATWCHS*AMCSLSGHSSI
Trigger: TATGGAAGAGTGTCCACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGTTGCAGGGACAACCATCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 72 bp CAGTTACCCTGTACTGCCCACTGCCTTACAGTTCAGTaGGCAGGCCTTCACCTTTTCATCACCAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: QLPCTAHCLTVQ*AGLHLFITSLS
Trigger: AGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGGTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR GCA 72 bp AAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTCAGTAAGATCTGCTGG +
Preference number: 3 (lower is better)
Translates to: KAIETGLLGLSR*CWNIIFSKICW
Trigger: CCAGCAGATCTTACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCATGCTGCCAGCATTTaGCCTTCTGGTTTCCCCTGC +
Preference number: 3 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKHAASI*PSGFPC
Trigger: GCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCATG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 72 bp TTAGATCAGCACCTGGAATACATGACACATTCTTACTaGGGTCATCCAGCACTGCCATGGTGGCTGCCCAGT +
Preference number: 3 (lower is better)
Translates to: LDQHLEYMTHSY*GHPALPWWLPS
Trigger: ACTGGGCAGCCACCATGGCAGTGCTGGATGACCTCAGTAAGAATGTGTCATGTATTCCAGGTGCTGATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTAAAAGGAATCTCATGTaGACTCCTGGCAGAGTTCAG +
Preference number: 3 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSKRNLM*TPGRVQ
Trigger: CTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTT...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTAAAAGGAATCTCATGTaGACTCCTGGCAGAGTTCAG +
Preference number: 3 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSKRNLM*TPGRVQ
Trigger: CTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCACTCAGGGACATGTTaGTTGCCTGGGATTGGTAAT +
Preference number: 3 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLHSGTC*LPGIGN
Trigger: ATTACCAATCCCAGGCAACAAACATGTCCCTGAGTG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTAAAGGCACAAGGGCATaGTGGCTTAACACTTTTGCT +
Preference number: 3 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSKGTRA*WLNTFA
Trigger: AGCAAAAGTGTTAAGCCACAATGCCCTTGTGCCTTT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 72 bp ATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCACCATTGTCCGGCATCC +
Preference number: 3 (lower is better)
Translates to: ILGWFGQDFPIP*YLEFLHHCPAS
Trigger: GGATGCCGGACAATGGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCATGCTGCCAGCATTTaGCCTTCTGGTTTCCCCTGC +
Preference number: 3 (lower is better)
Translates to: SLWELHISSVTFEPQFLDHAASI*PSGFPC
Trigger: GCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCATG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGTTTGTTGCCTGGGATaGGTAATGAAAGGTTGGTTT +
Preference number: 3 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSVCCLG*VMKGWF
Trigger: AAACCAACCTTTCATTACCAATCCCAGGCAACAAAC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCCTCACATAAGCCATTaGCCCACTGTGCAATATAGA +
Preference number: 3 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLPHISH*PTVQYR
Trigger: TCTATATTGCACAGTGGGCAAATGGCTTATGTGAGG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATCATCTTGGGGTGGTTaGGCCAGGATTTCCCAATTC +
Preference number: 3 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLSSWGG*ARISQF
Trigger: GAATTGGGAAATCCTGGCCAAACCACCCCAAGATGA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCAAAAGGAATCTCATGTaGACTCCTGGCAGAGTTCAG +
Preference number: 3 (lower is better)
Translates to: WGGLARISQFLDIWSFFTKRNLM*TPGRVQ
Trigger: CTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTT...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAGGAGTTTCTTCACCATaGTCCGGCATCCTGCGGAGG +
Preference number: 3 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRGVSSP*SGILRR
Trigger: CCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCC...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCCTCACATAAGCCATTaGCCCACTGTGCAATATAGA +
Preference number: 3 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSPHISH*PTVQYR
Trigger: TCTATATTGCACAGTGGGCAAATGGCTTATGTGAGG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CCA 72 bp CTGCATATCCAGCAAAAGGAATCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCAGTCTGTCTATCTGTT +
Preference number: 3 (lower is better)
Translates to: LHIQQKESHVDS*QSSVASVCLSV
Trigger: AACAGATAGACAGACTGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTTGCTGGATATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACACTCAGGGACATGTTaGTTGCCTGGGATTGGTAAT +
Preference number: 3 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQHSGTC*LPGIGN
Trigger: ATTACCAATCCCAGGCAACAAACATGTCCCTGAGTG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 72 bp GGCAGAGTTCAGTGGCTTCAGTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTGGATCCAGTAATCAAT +
Preference number: 3 (lower is better)
Translates to: GRVQWLQSVYLF*GENCVLDPVIN
Trigger: ATTGATTACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCACTGAACTCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCATGCTGCCAGCATTTaGCCTTCTGGTTTCCCCTGC +
Preference number: 3 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYHAASI*PSGFPC
Trigger: GCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCATG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAA +
Preference number: 3 (lower is better)
Translates to: SLWELHISSVTFEPQFLDSGTCL*PGIGNE
Trigger: TTCATTACCAATCCCAGGCAACAAACATGTCCCTGA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATGTGGCTTAACACTTTaGCTGGATCCCAAGAGACGC +
Preference number: 3 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRCGLTL*LDPKRR
Trigger: GCGTCTCTTGGGATCCAGCAAAAGTGTTAAGCCACA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR TCA 72 bp TTCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTaGGCCACAGTTTTTAGATCAGCACCTGGAATACAT +
Preference number: 3 (lower is better)
Translates to: FSLGASYKLGDI*ATVFRSAPGIH
Trigger: ATGTATTCCAGGTGCTGATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR TCA 72 bp CACACCCATTCCTTTACACATGATCTATGGCAGAGTTaGATAGTTGCAACAGACACTATGTGGCCTGCAAAA +
Preference number: 3 (lower is better)
Translates to: HTHSFTHDLWQS*IVATDTMWPAK
Trigger: TTTTGCAGGCCACATAGTGTCTGTTGCAACTATTCAACTCTGCCATAGATCATGTGTAAAGGAATGGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGATCCAGTAATCAATTaGGCAACTTTAATCGAGGTT +
Preference number: 3 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSDPVIN*ATLIEV
Trigger: AACCTCGATTAAAGTTGCCAAATTGATTACTGGATC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAGATCCAGTAATCAATTaGGCAACTTTAATCGAGGTT +
Preference number: 3 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLDPVIN*ATLIEV
Trigger: AACCTCGATTAAAGTTGCCAAATTGATTACTGGATC...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGTTCTGAGGGGAAAATaGTGTTCTGGATCCAGTAAT +
Preference number: 3 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPVLRGK*CSGSSN
Trigger: ATTACTGGATCCAGAACACAATTTTCCCCTCAGAAC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAAAAGGCACAAGGGCATaGTGGCTTAACACTTTTGCT +
Preference number: 3 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRKGTRA*WLNTFA
Trigger: AGCAAAAGTGTTAAGCCACAATGCCCTTGTGCCTTT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCTGGAGTTCTTGACCTaGTCCTTTATCATGAGATTT +
Preference number: 3 (lower is better)
Translates to: SLWELHISSVTFEPQFLDLEFLT*SFIMRF
Trigger: AAATCTCATGATAAAGGACAAGGTCAAGAACTCCAG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAAGTGCTCTGGAGTTCTaGACCTTGTCCTTTATCATG +
Preference number: 3 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRSALEF*TLSFIM
Trigger: CATGATAAAGGACAAGGTCAAGAACTCCAGAGCACT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAGTTTGTTGCCTGGGATaGGTAATGAAAGGTTGGTTT +
Preference number: 3 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRVCCLG*VMKGWF
Trigger: AAACCAACCTTTCATTACCAATCCCAGGCAACAAAC...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAA +
Preference number: 3 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKSGTCL*PGIGNE
Trigger: TTCATTACCAATCCCAGGCAACAAACATGTCCCTGA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAATAGCGCTGAGGCCCTaGCCCCGCCTCCAGTTACCC +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTIALRP*PRLQLP
Trigger: GGGTAACTGGAGGCGGGGCCAGGGCCTCAGCGCTAT...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGCCCCTCCTTGTTCATaGTGGAGCTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTAPPCS*WSCCSG
Trigger: CCCTGAGCAGCAGCTCCATCATGAACAAGGAGGGGC...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACGTCTTCTGGCCAGTGTaGCAGGCACATGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHVFWPV*QAHVPV
Trigger: GACAGGGACATGTGCCTGGCACACTGGCCAGAAGAC...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGGCTGCCCAGTCTTCTaGCCAGTGTGCCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTGCPVF*PVCQAH
Trigger: ATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCC...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAACATGGTGCCACTCCTaGGCCATGTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTTWCHS*AMCSLS
Trigger: ACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGT...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGTAATACCTCTGATTaGAGCGCCGCTCCGTCCGTT +
Preference number: 4 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHSNTSD*SAAPSV
Trigger: AACGGACGGAGCGGCGCTTCAATCAGAGGTATTACT...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395211.6
CDS-3UTR GCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACCATTTCCACTTTGTTaGCCAGGGGCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTPFPLC*PGAGSG
Trigger: ACCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGG...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIVPATW*HSWAMC
Trigger: GCACATGGCCCAGGAGTGGCACCATGTTGCAGGGAC...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCACTGCCATGGTGGCTaGCCAGTCTTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIHCHGG*PVFWPV
Trigger: CACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCACACAGCAAGGCCATTaGAACTGGGCTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNITQQGH*NWAPGA
Trigger: AGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGT...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAAAGTTTGCCAGCCCCTaGTCTAGACCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTKFASP*SRPAAH
Trigger: ATGAGCTGCTGGTCTAGATCAGGGGCTGGCAAACTT...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACATGCTGCCAGCATTTTaGCTTCTGGTTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHMLPAF*LLVSPA
Trigger: TGCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCAT...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCGGCCCGTGGGCGCCTTaGTGGTCTGATCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLGPWAP*WSDPSA
Trigger: GGCAGAAGGATCAGACCACCAAGGCGCCCACGGGCC...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACGGCACAAGGGCATTGTaGCTTAACACTTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHGTRAL*LNTFAG
Trigger: TCCAGCAAAAGTGTTAAGCCACAATGCCCTTGTGCC...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCCAGCACTGCCATGGTaGCTGCCCAGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSPALPW*LPSLLA
Trigger: GGCCAGAAGACTGGGCAGCCACCATGGCAGTGCTGG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCTTACTCATGAGCGTGTaGATGCCCAGGATCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNILLMSV*MPRIAA
Trigger: TGCAGCGATCCTGGGCATGCACACGCTCATGAGTAA...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCATAGCGCTGAGGCCCTaGCCCCGCCTCCAGTTACCC +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTIALRP*PRLQLP
Trigger: GGGTAACTGGAGGCGGGGCCAGGGCCTCAGCGCTAT...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCACACCTTGTTCTCCTTaGGCATCTCAGCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNITPCSP*ASQQGH
Trigger: ATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGT...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCAGGGCTTCTGCATATaGCTTGAGGGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSQGFCI*LEGGDG
Trigger: CCCATCCCCACCCTCAAGGCATATGCAGAAGCCCTG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCATCATTGCGTTGGATaGCCGAAGCCGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSHHCVG*PKPGSL
Trigger: CAAGGACCCCGGCTTCGGGCATCCAACGCAATGATG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCACTGCCATGGTGGCTaGCCAGTCTTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLHCHGG*PVFWPV
Trigger: CACTGGCCAGAAGACTGGGCAGCCACCATGGCAGTG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCCTGGCAGAGTTCAGTaGCTTCAGTCTGTCTATCTG +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIPGRVQ*LQSVYL
Trigger: CAGATAGACAGACTGAAGCCACTGAACTCTGCCAGG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTACATGGTGCCACTCCTaGGCCATGTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSTWCHS*AMCSLS
Trigger: ACTGAGGCTGCACATGGCCCAGGAGTGGCACCATGT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTGTTGTCCCTGCAACATaGTGCCACTCCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSVVPAT*CHSWAM
Trigger: CATGGCCCAGGAGTGGCACCATGTTGCAGGGACAAC...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGTTGTCCCTGCAACATaGTGCCACTCCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSVVPAT*CHSWAM
Trigger: CATGGCCCAGGAGTGGCACCATGTTGCAGGGACAAC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTTCCGGCACTTGGGAATaGTGGGCCCAGTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSSGTWE*WAQSGP
Trigger: CGGACCTGACTGGGCCCATCATTCCCAAGTGCCGGA...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCTTCTGCCTCAGGCCTaGAGGCAGCAGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSLLPQA*RQQCII
Trigger: GATAATGCACTGCTGCCTGCAGGCCTGAGGCAGAAG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCAGGGCTTCTGCATATaGCTTGAGGGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLQGFCI*LEGGDG
Trigger: CCCATCCCCACCCTCAAGGCATATGCAGAAGCCCTG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACGATGCAGAATGCAGCTaGAATTGTGTTTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHDAECS*NCVLRR
Trigger: TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATC...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTGTTCATCATTGCGTTaGATGCCCGAAGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSCSSLR*MPEAGV
Trigger: GACCCCGGCTTCGGGCATCCAACGCAATGATGAACA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGCCCCTCCTTGTTCATaGTGGAGCTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSAPPCS*WSCCSG
Trigger: CCCTGAGCAGCAGCTCCATCATGAACAAGGAGGGGC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTTTACTCATGAGCGTGTaGATGCCCAGGATCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSLLMSV*MPRIAA
Trigger: TGCAGCGATCCTGGGCATGCACACGCTCATGAGTAA...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCACAAAAGGGTTTCATaGTGCCAGCATTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIHKRVS*CQHFAF
Trigger: GAAGGCAAAATGCTGGCAGCATGAAACCCTTTTGTG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCATCACCAGCCTCTCTaGTCAGTGCTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSHHQPL*SVLWSS
Trigger: AGAACTCCAGAGCACTGAGCAGAGAGGCTGGTGATG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCCCTGTACTGCCCACTaGCTTACAGTTCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKPCTAH*LTVQCA
Trigger: TGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGTCCCTGCAACATGGTaGCACTCCTGGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSVPATW*HSWAMC
Trigger: GCACATGGCCCAGGAGTGGCACCATGTTGCAGGGAC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGATGCAGAATGCAGCTaGAATTGTGTTTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTDAECS*NCVLRR
Trigger: TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATC...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTCCAGTTCAAAGGCATaGACTCCACCGCCACACACT +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSSSKA*TPPPHT
Trigger: AGTGTGTGGCGGTGGAGTCCATGCCTTTGAACTGGA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGGCGCCTTGGTGGTCTaGTCCTTCTGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPGALVV*SFCLRP
Trigger: AGGCCTGAGGCAGAAGGATCAGACCACCAAGGCGCC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTACACCTTGTTCTCCTTaGGCATCTCAGCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSTPCSP*ASQQGH
Trigger: ATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAATCCGGCACTTGGGAATaGTGGGCCCAGTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQSGTWE*WAQSGP
Trigger: CGGACCTGACTGGGCCCATCATTCCCAAGTGCCGGA...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTCCGGCACTTGGGAATaGTGGGCCCAGTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDSGTWE*WAQSGP
Trigger: CGGACCTGACTGGGCCCATCATTCCCAAGTGCCGGA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNISVYLF*GENCVL
Trigger: CAGAACACAATTTTCCCCTCAGAACAGATAGACAGA...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACATCATTGCGTTGGATaGCCGAAGCCGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLHHCVG*PKPGSL
Trigger: CAAGGACCCCGGCTTCGGGCATCCAACGCAATGATG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCATCATTGCGTTGGATaGCCGAAGCCGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSHHCVG*PKPGSL
Trigger: CAAGGACCCCGGCTTCGGGCATCCAACGCAATGATG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCATTGTCCGGCATCCTaGGGAGGCTTAATATACAGG +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSHCPAS*GGLIYR
Trigger: CCTGTATATTAAGCCTCCGCAGGATGCCGGACAATG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTAGCCTCTCTGCTCAGTaGTCTGGAGTTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSLSAQ*SGVLDL
Trigger: AAGGTCAAGAACTCCAGAGCACTGAGCAGAGAGGCT...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCATCACCAGCCTCTCTaGTCAGTGCTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLHHQPL*SVLWSS
Trigger: AGAACTCCAGAGCACTGAGCAGAGAGGCTGGTGATG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTGCCTTACAGTTCAGTaGGCAGGCCTTCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSCLTVQ*AGLHLF
Trigger: GAAAAGGTGAAGGCCTGCGCACTGAACTGTAAGGCA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCAGCACAGGATCCAGTaGCTTCTGCTTAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKQHRIQ*LLLRNP
Trigger: TGGGTTCCTAAGCAGAAGCCACTGGATCCTGTGCTG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCAGAGAAGTGTTGTATaGGAGGGCTTCTACCAGGCG +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKQRSVV*EGFYQA
Trigger: CGCCTGGTAGAAGCCCTCCCATACAACACTTCTCTG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCCCAGGGGCTGGCTCTaGTTGTCAATTTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSPRGWL*LSIFIS
Trigger: GGAAATGAAAATTGACAACCAGAGCCAGCCCCTGGG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCTCCAGTTCAAAGGCATaGACTCCACCGCCACACACT +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLSSSKA*TPPPHT
Trigger: AGTGTGTGGCGGTGGAGTCCATGCCTTTGAACTGGA...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCATCTTGGGGTGGTTTaGCCAGGATTTCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSHLGVV*PGFPNS
Trigger: GGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCATGTGCAGCCTCAGTaGACACTCTTCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKHVQPQ*TLFHSA
Trigger: AGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTGTTGTCCCTGCAACATaGTGCCACTCCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSVVPAT*CHSWAM
Trigger: CATGGCCCAGGAGTGGCACCATGTTGCAGGGACAAC...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGAAGCCAAATGGGGATaGTTGTCCCTGCAACATGGT +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSEAKWG*LSLQHG
Trigger: ACCATGTTGCAGGGACAACCATCCCCATTTGGCTTC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACCAGCACTGCCATGGTaGCTGCCCAGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQPALPW*LPSLLA
Trigger: GGCCAGAAGACTGGGCAGCCACCATGGCAGTGCTGG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCATCCAGCACTGCCATaGTGGCTGCCCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSHPALP*WLPSLL
Trigger: CAGAAGACTGGGCAGCCACCATGGCAGTGCTGGATG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCCTGAATTTCTGTGCTaGGTAATACCCGGACGCAGA +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLPEFLC*VIPGRR
Trigger: TCTGCGTCCGGGTATTACTCAGCACAGAAATTCAGG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259365.9
CDS-3UTR TCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGTGTCCCCACGATGCTaGACTTCTTCACATATGAGT +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSVSPRC*TSSHMS
Trigger: ACTCATATGTGAAGAAGTTCAGCATCGTGGGGACAC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIDFPIP*YLEFLH
Trigger: GTGAAGAAACTCCAGATATCAAGGAATTGGGAAATC...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACGGCCAGGTGGGCTCTaGGCCGCAAGCTTTAACCGC +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRRPGGL*AASFNR
Trigger: GCGGTTAAAGCTTGCGGCTCAGAGCCCACCTGGCCG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCCATGCCCAGGATCGCTaGAATGTCACAGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTHAQDR*NVTEFC
Trigger: GCAGAACTCTGTGACATTGCAGCGATCCTGGGCATG...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACCATTTCCACTTTGTTaGCCAGGGGCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLPFPLC*PGAGSG
Trigger: ACCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTLGLSR*CWNIIF
Trigger: GAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAG...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCCCTGTACTGCCCACTaGCTTACAGTTCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSPCTAH*LTVQCA
Trigger: TGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTTACTCATGAGCGTGTaGATGCCCAGGATCGATAGA +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSLLMSV*MPRIDR
Trigger: TCTATCGATCCTGGGCATGCACACGCTCATGAGTAA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR CCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCCGTGGGCGCCTTGGTaGTCTGATCCTTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDPWAPW*SDPSAS
Trigger: TGAGGCAGAAGGATCAGACCACCAAGGCGCCCACGG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTTGTTCATCATTGCGTTaGATGCCCGAAGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSCSSLR*MPEAGV
Trigger: GACCCCGGCTTCGGGCATCCAACGCAATGATGAACA...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTGGCACAAGGGCATTGTaGCTTAACACTTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSGTRAL*LNTFAG
Trigger: TCCAGCAAAAGTGTTAAGCCACAATGCCCTTGTGCC...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGGCTGCCCAGTCTTCTaGCCAGTGTGCCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQGCPVF*PVCQAH
Trigger: ATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTCCCAGCTCCAGAAATaGAGTTGGATTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSQLQK*SWIPHS
Trigger: TGAATGTGGAATCCAACTTCATTTCTGGAGCTGGGA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCACAAAAGGGTTTCATaGTGCCAGCATTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSHKRVS*CQHFAF
Trigger: GAAGGCAAAATGCTGGCAGCATGAAACCCTTTTGTG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCAGCCTCTCTGCTCAGTaGTCTGGAGTTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTSLSAQ*SGVLDL
Trigger: AAGGTCAAGAACTCCAGAGCACTGAGCAGAGAGGCT...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGGGGATGGTTGTCCCTaGAACATGGTGCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQGDGCP*NMVPLL
Trigger: CAGGAGTGGCACCATGTTGCAGGGACAACCATCCCC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGGGGATGGTTGTCCCTaGAACATGGTGCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPGDGCP*NMVPLL
Trigger: CAGGAGTGGCACCATGTTGCAGGGACAACCATCCCC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTGCAGTTTTCAGCGATaGAGAATGCAGCTGCAATTG +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSCSFQR*RMQLQL
Trigger: CAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGTCTTCTGGCCAGTGTaGCAGGCACATGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQVFWPV*QAHVPV
Trigger: GACAGGGACATGTGCCTGGCACACTGGCCAGAAGAC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCAGCACAGGATCCAGTaGCTTCTGCTTAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSQHRIQ*LLLRNP
Trigger: TGGGTTCCTAAGCAGAAGCCACTGGATCCTGTGCTG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCAGAGAAGTGTTGTATaGGAGGGCTTCTACCAGGCG +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSQRSVV*EGFYQA
Trigger: CGCCTGGTAGAAGCCCTCCCATACAACACTTCTCTG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACATGTGCAGCCTCAGTaGACACTCTTCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLHVQPQ*TLFHSA
Trigger: AGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACATCCAGCACTGCCATaGTGGCTGCCCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQHPALP*WLPSLL
Trigger: CAGAAGACTGGGCAGCCACCATGGCAGTGCTGGATG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGCTTGCTTTTCCAAGTaGTCCAAGAGCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTACFSK*SKSSSL
Trigger: AAGAGAGGAGCTCTTGGATCACTTGGAAAAGCAAGC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCTTCCTCTACGTCTGTTaGATTTGGTTCTTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTFLYVC*IWFFVG
Trigger: CCCGACGAAGAACCAAATTCAACAGACGTAGAGGAA...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCTCCCAGCTCCAGAAATaGAGTTGGATTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLSQLQK*SWIPHS
Trigger: TGAATGTGGAATCCAACTTCATTTCTGGAGCTGGGA...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCATTTTAAATGCACTTaGAACACCACACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSHFKCT*NTTQQG
Trigger: GCCTTGCTGTGTGGTGTTTCAAGTGCATTTAAAATG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTAAGCTCGGTGACATTTaGGCCACAGTTTTTAGATCA +
Preference number: 4 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSKLGDI*ATVFRS
Trigger: TGATCTAAAAACTGTGGCTCAAATGTCACCGAGCTT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGCCTGCAGGCAGCAGTaGATTATCAGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETACRQQ*IIRVQL
Trigger: GAGCTGGACCCTGATAATGCACTGCTGCCTGCAGGC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCAAAAGGGTTTCATGCTaGCAGCATTTTGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLKRVSC*QHFAFW
Trigger: CCAGAAGGCAAAATGCTGGCAGCATGAAACCCTTTT...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGCATGTGGAAGAGTGTaGCGTTTCTGTGTCACACAT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTACGRV*RFCVTH
Trigger: ATGTGTGACACAGAAACGGCACACTCTTCCACATGC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGTGCAGTTTTCAGCGATaGAGAATGCAGCTGCAATTG +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKCSFQR*RMQLQL
Trigger: CAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCA...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGGCCCGTGGGCGCCTTaGTGGTCTGATCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKGPWAP*WSDPSA
Trigger: GGCAGAAGGATCAGACCACCAAGGCGCCCACGGGCC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCCCAGGGGCTGGCTCTaGTTGTCAATTTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSPRGWL*LSIFIS
Trigger: GGAAATGAAAATTGACAACCAGAGCCAGCCCCTGGG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCAGCATTTTGCCTTCTaGTTTCCCCTGCAGAGCACA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSQHFAF*FPLQST
Trigger: TGTGCTCTGCAGGGGAAACCAGAAGGCAAAATGCTG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACCTGGCAGAGTTCAGTaGCTTCAGTCTGTCTATCTG +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLPGRVQ*LQSVYL
Trigger: CAGATAGACAGACTGAAGCCACTGAACTCTGCCAGG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCTCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTSHVDS*QSSVAS
Trigger: TGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGA...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCATCTTGGGGTGGTTTaGCCAGGATTTCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSHLGVV*PGFPNS
Trigger: GGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACATAGCGCTGAGGCCCTaGCCCCGCCTCCAGTTACCC +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYIALRP*PRLQLP
Trigger: GGGTAACTGGAGGCGGGGCCAGGGCCTCAGCGCTAT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGAAGCCAAATGGGGATaGTTGTCCCTGCAACATGGT +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSEAKWG*LSLQHG
Trigger: ACCATGTTGCAGGGACAACCATCCCCATTTGGCTTC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGAGCAGCGCGGCCAGGTaGGCTCTGAGCCGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKSSAAR*ALSRKL
Trigger: AAGCTTGCGGCTCAGAGCCCACCTGGCCGCGCTGCT...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395211.6
CDS-3UTR TCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGGCGCCTTGGTGGTCTaGTCCTTCTGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKGALVV*SFCLRP
Trigger: AGGCCTGAGGCAGAAGGATCAGACCACCAAGGCGCC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTACAGAGTTCTGCATCTaGAGCATTTGCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSTEFCI*SICQGF
Trigger: GAAGCCTTGGCAAATGCTTCAGATGCAGAACTCTGT...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAACACAGCAAGGCCATTaGAACTGGGCTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRTQQGH*NWAPGA
Trigger: AGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGTCTGTCTATCTGTTCTaGGGGGAAAATTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKSVYLF*GENCVL
Trigger: CAGAACACAATTTTCCCCTCAGAACAGATAGACAGA...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAATGACACATTCTTACTaGGGTCATCCAGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLMTHSY*GHPALP
Trigger: TGGCAGTGCTGGATGACCTCAGTAAGAATGTGTCAT...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCAAGCTCGGTGACATTTaGGCCACAGTTTTTAGATCA +
Preference number: 4 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLKLGDI*ATVFRS
Trigger: TGATCTAAAAACTGTGGCTCAAATGTCACCGAGCTT...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAAAGTTTGCCAGCCCCTaGTCTAGACCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQKFASP*SRPAAH
Trigger: ATGAGCTGCTGGTCTAGATCAGGGGCTGGCAAACTT...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCCATTTCCACTTTGTTaGCCAGGGGCTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETPFPLC*PGAGSG
Trigger: ACCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTATTGTTGTTCATCATTaGGTTGGATGCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSIVVHH*VGCPKP
Trigger: CGGCTTCGGGCATCCAACGCAATGATGAACAACAAT...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCAAAAGGGTTTCATGCTaGCAGCATTTTGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTKRVSC*QHFAFW
Trigger: CCAGAAGGCAAAATGCTGGCAGCATGAAACCCTTTT...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCCACAAAAGGGTTTCATaGTGCCAGCATTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTHKRVS*CQHFAF
Trigger: GAAGGCAAAATGCTGGCAGCATGAAACCCTTTTGTG...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCCTGGGGCTAAGTCGCTaGTGCTGGAACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPLGLSR*CWNIIF
Trigger: GAAGATGATGTTCCAGCAGCAGCGACTTAGCCCCAG...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGCATGTGGAAGAGTGTaGCGTTTCTGTGTCACACAT +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSACGRV*RFCVTH
Trigger: ATGTGTGACACAGAAACGGCACACTCTTCCACATGC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAGGGGATGGTTGTCCCTaGAACATGGTGCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRGDGCP*NMVPLL
Trigger: CAGGAGTGGCACCATGTTGCAGGGACAACCATCCCC...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCTGCAGTTTTCAGCGATaGAGAATGCAGCTGCAATTG +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTCSFQR*RMQLQL
Trigger: CAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCA...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGTCTGTACGACATCGTaGAAGAACTTGTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTVCTTS*KNLSVS
Trigger: AGACACAGACAAGTTCTTCCACGATGTCGTACAGAC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCAGAGAAGTGTTGTATaGGAGGGCTTCTACCAGGCG +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDQRSVV*EGFYQA
Trigger: CGCCTGGTAGAAGCCCTCCCATACAACACTTCTCTG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTGTTCATCATTGCGTTaGATGCCCGAAGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETCSSLR*MPEAGV
Trigger: GACCCCGGCTTCGGGCATCCAACGCAATGATGAACA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCTCCAGTTCAAAGGCATaGACTCCACCGCCACACACT +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPSSSKA*TPPPHT
Trigger: AGTGTGTGGCGGTGGAGTCCATGCCTTTGAACTGGA...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCTCATGTTGACTCCTaGCAGAGTTCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSSHVDS*QSSVAS
Trigger: TGAAGCCACTGAACTCTGCCAGGAGTCAACATGAGA...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTCTGAAGTCTCTAAGCTaGGCCATTACTAAATACCAT +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSLKSLS*AITKYH
Trigger: ATGGTATTTAGTAATGGCCCAGCTTAGAGACTTCAG...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGGCACAAGGGCATTGTaGCTTAACACTTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSGTRAL*LNTFAG
Trigger: TCCAGCAAAAGTGTTAAGCCACAATGCCCTTGTGCC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAACTGCTGGTTACTCATaGGCGTGTGCATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRTAGYS*ACACPG
Trigger: TCCTGGGCATGCACACGCTCATGAGTAACCAGCAGT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGCCCCTCCTTGTTCATaGTGGAGCTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKAPPCS*WSCCSG
Trigger: CCCTGAGCAGCAGCTCCATCATGAACAAGGAGGGGC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACACCTTGTTCTCCTTaGGCATCTCAGCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPTPCSP*ASQQGH
Trigger: ATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATCCCAGCTCCAGAAATaGAGTTGGATTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLSQLQK*SWIPHS
Trigger: TGAATGTGGAATCCAACTTCATTTCTGGAGCTGGGA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCCATTTTAAATGCACTTaGAACACCACACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTHFKCT*NTTQQG
Trigger: GCCTTGCTGTGTGGTGTTTCAAGTGCATTTAAAATG...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAAGCACCTGGAATACATaGCACATTCTTACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLSTWNT*HILTEV
Trigger: GACCTCAGTAAGAATGTGTCATGTATTCCAGGTGCT...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTATGTCCAACATCAAATaGCAGGCATCCAAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSMSNIK*QASKVS
Trigger: GCTAACCTTGGATGCCTGTCATTTGATGTTGGACAT...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACTTCTGCCTCAGGCCTaGAGGCAGCAGTGCATTATC +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRLLPQA*RQQCII
Trigger: GATAATGCACTGCTGCCTGCAGGCCTGAGGCAGAAG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGGATCCAGTGGCTTCTaGTTAGGAACCCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPGSSGF*LGTQTF
Trigger: AAAGGTCTGGGTTCCTAAGCAGAAGCCACTGGATCC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAATGCTGCCAGCATTTTaGCTTCTGGTTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQMLPAF*LLVSPA
Trigger: TGCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCAT...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCCAGGGACATGTTTGTTaGCTGGGATTGGTAATGAAA +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTQGHVC*LGLVMK
Trigger: TTTCATTACCAATCCCAGGCAACAAACATGTCCCTG...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCCATTGTCCGGCATCCTaGGGAGGCTTAATATACAGG +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPHCPAS*GGLIYR
Trigger: CCTGTATATTAAGCCTCCGCAGGATGCCGGACAATG...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCAGCCTCTCTGCTCAGTaGTCTGGAGTTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPSLSAQ*SGVLDL
Trigger: AAGGTCAAGAACTCCAGAGCACTGAGCAGAGAGGCT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTGCCTTACAGTTCAGTaGGCAGGCCTTCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDCLTVQ*AGLHLF
Trigger: GAAAAGGTGAAGGCCTGCGCACTGAACTGTAAGGCA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTGTCTGTACGACATCGTaGAAGAACTTGTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSVCTTS*KNLSVS
Trigger: AGACACAGACAAGTTCTTCCACGATGTCGTACAGAC...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CCA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTAACTTCTTCAAGTTTTaGGTCGTTGTTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSNFFKF*VVVLYP
Trigger: CGGATAAAGAACAACGACCCAAAACTTGAAGAAGTT...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCAGCATTTTGCCTTCTaGTTTCCCCTGCAGAGCACA +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDQHFAF*FPLQST
Trigger: TGTGCTCTGCAGGGGAAACCAGAAGGCAAAATGCTG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
3UTR CAA 72 bp AACTGGCACTGTGGTATATTAAAAGGCACAAGGGCATaGTGGCTTAACACTTTTGCTGGATCCCAAGAGACG +
Preference number: 4 (lower is better)
Translates to: NWHCGILKGTRA*WLNTFAGSQET
Trigger: CGTCTCTTGGGATCCAGCAAAAGTGTTAAGCCACAATGCCCTTGTGCCTTTTAATATACCACAGTGCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACAGAGTTCTGCATCTaGAGCATTTGCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPTEFCI*SICQGF
Trigger: GAAGCCTTGGCAAATGCTTCAGATGCAGAACTCTGT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTTCCTCTACGTCTGTTaGATTTGGTTCTTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDFLYVC*IWFFVG
Trigger: CCCGACGAAGAACCAAATTCAACAGACGTAGAGGAA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGTGTCCCCACGATGCTaGACTTCTTCACATATGAGT +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQVSPRC*TSSHMS
Trigger: ACTCATATGTGAAGAAGTTCAGCATCGTGGGGACAC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGCCTGCAGGCAGCAGTaGATTATCAGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKACRQQ*IIRVQL
Trigger: GAGCTGGACCCTGATAATGCACTGCTGCCTGCAGGC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCATTGTTGTTCATCATTaGGTTGGATGCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPIVVHH*VGCPKP
Trigger: CGGCTTCGGGCATCCAACGCAATGATGAACAACAAT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATATTGTTGTTCATCATTaGGTTGGATGCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDIVVHH*VGCPKP
Trigger: CGGCTTCGGGCATCCAACGCAATGATGAACAACAAT...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTATGCTGCCAGCATTTTaGCTTCTGGTTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETMLPAF*LLVSPA
Trigger: TGCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCAT...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGGGCTAAGTCGCTGCTaGTGGAACATCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETGLSRC*WNIIFS
Trigger: ACTGAAGATGATGTTCCAGCAGCAGCGACTTAGCCC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGCCATTTGCCCACTGTaGAATATAGAAAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: WGGLARISQFLDIWSFFTAICPL*NIERCF
Trigger: AAAACACCTTTCTATATTGCACAGTGGGCAAATGGC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACATCACCAGCCTCTCTaGTCAGTGCTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRHHQPL*SVLWSS
Trigger: AGAACTCCAGAGCACTGAGCAGAGAGGCTGGTGATG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCCCAGGGGCTGGCTCTaGTTGTCAATTTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETPRGWL*LSIFIS
Trigger: GGAAATGAAAATTGACAACCAGAGCCAGCCCCTGGG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCATCTTGGGGTGGTTTaGCCAGGATTTCCCAATTCC +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETHLGVV*PGFPNS
Trigger: GGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGCTTGCTTTTCCAAGTaGTCCAAGAGCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETACFSK*SKSSSL
Trigger: AAGAGAGGAGCTCTTGGATCACTTGGAAAAGCAAGC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGACTGCTGGTTACTCATaGGCGTGTGCATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKTAGYS*ACACPG
Trigger: TCCTGGGCATGCACACGCTCATGAGTAACCAGCAGT...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTTCCTCTACGTCTGTTaGATTTGGTTCTTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETFLYVC*IWFFVG
Trigger: CCCGACGAAGAACCAAATTCAACAGACGTAGAGGAA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGTGTCCCCACGATGCTaGACTTCTTCACATATGAGT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETVSPRC*TSSHMS
Trigger: ACTCATATGTGAAGAAGTTCAGCATCGTGGGGACAC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCAGCACCTGGAATACATaGCACATTCTTACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPSTWNT*HILTEV
Trigger: GACCTCAGTAAGAATGTGTCATGTATTCCAGGTGCT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAAACTGTATAGTTTATTaGACAGCCACACCCATTCCT +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLNCIVY*TATPIP
Trigger: AGGAATGGGTGTGGCTGTTCAATAAACTATACAGTT...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACCTTCTGGTTTCCCCTaGAGAGCACAGGTCATCAAT +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRPSGFP*RAQVIN
Trigger: ATTGATGACCTGTGCTCTGCAGGGGAAACCAGAAGG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTGCCATTTGCCCACTGTaGAATATAGAAAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSAICPL*NIERCF
Trigger: AAAACACCTTTCTATATTGCACAGTGGGCAAATGGC...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCCCTGTACTGCCCACTaGCTTACAGTTCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYPCTAH*LTVQCA
Trigger: TGCGCACTGAACTGTAAGGCAGTGGGCAGTACAGGG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGATGCAGAATGCAGCTaGAATTGTGTTTTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSDAECS*NCVLRR
Trigger: TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTTCAGCGATGCAGAATaGAGCTGCAATTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSFSDAE*SCNCVL
Trigger: TAAAACACAATTGCAGCTGCATTCTGCATCGCTGAA...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATTGTTGCCCAGGGGCTaGCTCTGGTTGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRLLPRG*LWLSIF
Trigger: GAAAATTGACAACCAGAGCCAGCCCCTGGGCAACAA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACTGGGACATGGTAGGTaGTCAAAAGTGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRLGHGR*SKVFSP
Trigger: GGGACTGAACACTTTTGACCACCTACCATGTCCCAG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR CCA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAAACTTCTTCAAGTTTTaGGTCGTTGTTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLNFFKF*VVVLYP
Trigger: CGGATAAAGAACAACGACCCAAAACTTGAAGAAGTT...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTAACTTCTTCAAGTTTTaGGTCGTTGTTCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSNFFKF*VVVLYP
Trigger: CGGATAAAGAACAACGACCCAAAACTTGAAGAAGTT...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAATACTTCAAAAGCATGTaGAAGAGTGTGCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQYFKSM*KSVPFL
Trigger: CAGAAACGGCACACTCTTCCACATGCTTTTGAAGTA...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCATGTGCAGCCTCAGTaGACACTCTTCCATAGCGCT +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKHVQPQ*TLFHSA
Trigger: AGCGCTATGGAAGAGTGTCCACTGAGGCTGCACATG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CAA 72 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATaGTGTTCTGGATCCAGTAATCAATTTGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: VASVCLSVLRGK*CSGSSNQFGNF
Trigger: AAAGTTGCCAAATTGATTACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCCTGAATTTCTGTGCTaGGTAATACCTCTGATTGAA +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDPEFLC*VIPLIE
Trigger: TTCAATCAGAGGTATTACTCAGCACAGAAATTCAGG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCATTGTCCGGCATCCTaGGGAGGCTTAATATACAGG +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYHCPAS*GGLIYR
Trigger: CCTGTATATTAAGCCTCCGCAGGATGCCGGACAATG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCTTCAGCGATGCAGAATaGAGCTGCAATTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPFSDAE*SCNCVL
Trigger: TAAAACACAATTGCAGCTGCATTCTGCATCGCTGAA...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAACTTCGGCAGCATATTaGGTCGTTACAGATAACAAT +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQTSAAY*VVTDNN
Trigger: ATTGTTATCTGTAACGACGCAATATGCTGCCGAAGT...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTTGTTGCCCAGGGGCTaGCTCTGGTTGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKLLPRG*LWLSIF
Trigger: GAAAATTGACAACCAGAGCCAGCCCCTGGGCAACAA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTACTTCAAAAGCATGTaGAAGAGTGTGCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETYFKSM*KSVPFL
Trigger: CAGAAACGGCACACTCTTCCACATGCTTTTGAAGTA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACTGAAGTCTCTAAGCTaGGCCATTACTAAATACCAT +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQLKSLS*AITKYH
Trigger: ATGGTATTTAGTAATGGCCCAGCTTAGAGACTTCAG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETDFPIP*YLEFLH
Trigger: GTGAAGAAACTCCAGATATCAAGGAATTGGGAAATC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCCTTGTCCTTTATCATaGGATTTGCTGAAATCACTA +
Preference number: 4 (lower is better)
Translates to: SLWELHISSVTFEPQFLDPCPLS*DLLKSL
Trigger: TAGTGATTTCAGCAAATCTCATGATAAAGGACAAGG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR TCA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACCTTGTCCTTTATCATaGGATTTGCTGAAATCACTA +
Preference number: 4 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQPCPLS*DLLKSL
Trigger: TAGTGATTTCAGCAAATCTCATGATAAAGGACAAGG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACATGACACATTCTTACTaGGGTCATCCAGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYMTHSY*GHPALP
Trigger: TGGCAGTGCTGGATGACCTCAGTAAGAATGTGTCAT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR GCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACGCATGTGGAAGAGTGTaGCGTTTCTGTGTCACACAT +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYACGRV*RFCVTH
Trigger: ATGTGTGACACAGAAACGGCACACTCTTCCACATGC...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGCCATTTGCCCACTGTaGAATATAGAAAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETAICPL*NIERCF
Trigger: AAAACACCTTTCTATATTGCACAGTGGGCAAATGGC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCTCCTTCCCCAGAGATaGTGCCATCTTTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKLLPQR*CHLSNV
Trigger: GACATTTGAAAGATGGCAGCATCTCTGGGGAAGGAG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR CCA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATACTTCAAAAGCATGTaGAAGAGTGTGCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRYFKSM*KSVPFL
Trigger: CAGAAACGGCACACTCTTCCACATGCTTTTGAAGTA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCATAGCCATGTTGATCTaGAAATTTATCCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPIAMLI*KFIPLV
Trigger: CACTAGAGGGATAAATTTCCAGATCAACATGGCTAT...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCTGAAGTCTCTAAGCTaGGCCATTACTAAATACCAT +
Preference number: 4 (lower is better)
Translates to: SGTCLLPGIGNERLVFETLKSLS*AITKYH
Trigger: ATGGTATTTAGTAATGGCCCAGCTTAGAGACTTCAG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGAGGATCGATAGAACCTaGGACATGGTAGGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKRIDRT*DMVGGQ
Trigger: TTGACCACCTACCATGTCCCAGGTTCTATCGATCCT...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375175.1
3UTR CAA 72 bp CCAAATGTTCTTAAAGAACACTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PNVLKEHSGTCL*PGIGNERLVFE
Trigger: TTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTAAGAACATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CAA 72 bp ATCCCAAATGTTCTTAAAGAACACTCAGGGACATGTTaGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IPNVLKEHSGTC*LPGIGNERLVF
Trigger: AAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGAGTGTTCTTTAAGAACATTTGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
3UTR CAA 72 bp ATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTaGCCCACTGTGCAATATAGAAAGGTGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IYPSSVLPHISH*PTVQYRKVFSK
Trigger: TTTTGAAAACACCTTTCTATATTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR TCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACGATTTCCCAATTCCTTaGTATCTGGAGTTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYDFPIP*YLEFLH
Trigger: GTGAAGAAACTCCAGATATCAAGGAATTGGGAAATC...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR GCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTTCAGCGATGCAGAATaGAGCTGCAATTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKFSDAE*SCNCVL
Trigger: TAAAACACAATTGCAGCTGCATTCTGCATCGCTGAA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACATAGCCATGTTGATCTaGAAATTTATCCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYIAMLI*KFIPLV
Trigger: CACTAGAGGGATAAATTTCCAGATCAACATGGCTAT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CCA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGATAGCCATGTTGATCTaGAAATTTATCCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKIAMLI*KFIPLV
Trigger: CACTAGAGGGATAAATTTCCAGATCAACATGGCTAT...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS GCA 90 bp AGTAATACCCGGACGCAGAGCTGTGGGGCCGGCGCGGACGCGGGCTaGGGAACAGGCGCGGGCGGCGGGCAGATGGACGCGGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SNTRTQSCGAGADAG*GTGAGGGQMDAGGG
Trigger: GCCTCCGCCCGCGTCCATCTGCCCGCCGCCCGCGCCTGTTCCGCAGCCCGCGTCCGCGCCGGCCCCACAGCTCTGCGTCCGGGTATTACT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259365.9
CDS TCA 90 bp TGGACTCCACCGCCACACACTAGACACCACTCCGGCACTTGGGAATaGTGGGCCCAGTCAGGTCCGCAAGCCTCCTCTTCCTCACAAGGT +
Preference number: 5 (lower is better)
Translates to: WTPPPHTRHHSGTWE*WAQSGPQASSSSQG
Trigger: ACCTTGTGAGGAAGAGGAGGCTTGCGGACCTGACTGGGCCCATCATTCCCAAGTGCCGGAGTGGTGTCTAGTGTGTGGCGGTGGAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACCTGCATCTGAAGCATTaGCCAAGGCTTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHLHLKH*PRLPPA
Trigger: AGCTGGAGGAAGCCTTGGCAAATGCTTCAGATGCAG...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAATCTCCATTTCCACTTaGTTGCCCAGGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTISIST*LPRGWL
Trigger: GAGCCAGCCCCTGGGCAACAAAGTGGAAATGGAGAT...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACGGGCACAGGCTTGTATaGTGTGGGTTTAATCACGCT +
Preference number: 5 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHGHRLV*CGFNHA
Trigger: AGCGTGATTAAACCCACACAATACAAGCCTGTGCCC...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCGCCAAATGGGGATGGTaGTCCCTGCAACATGGTGCC +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIAKWGW*SLQHGA
Trigger: GGCACCATGTTGCAGGGACAACCATCCCCATTTGGC...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCTGTTGAGCCCCTCCTaGTTCATGATGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNILLSPS*FMMELL
Trigger: CAGCAGCTCCATCATGAACAAGGAGGGGCTCAACAG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCCGAAGCCGGGGTCCTaGCTGGGTAAAGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSPKPGS*LGKVVA
Trigger: GGCTACCACTTTACCCAGCAAGGACCCCGGCTTCGG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCATGCTGCCAGCATTTaGCCTTCTGGTTTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIHAASI*PSGFPC
Trigger: GCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCATG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAAAAGGAATCTCATGTaGACTCCTGGCAGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHKRNLM*TPGRVQ
Trigger: CTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTT...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp CCATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACAGTGCTCTGGAGTTCTaGACCTTGTCCTTTATCATG +
Preference number: 5 (lower is better)
Translates to: PWWLPSLLASVPGTCPCHSALEF*TLSFIM
Trigger: CATGATAAAGGACAAGGTCAAGAACTCCAGAGCACT...GTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCTCGTCGGGCACAGGCTaGTATTGTGTGGGTTTAATC +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNISSGTG*YCVGLI
Trigger: GATTAAACCCACACAATACAAGCCTGTGCCCGACGA...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCTACGTCTGTTGAATTaGGTTCTTCGTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNILRLLN*VLRRAQ
Trigger: CTGTGCCCGACGAAGAACCAAATTCAACAGACGTAG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTTCCATTTCCACTTTGTaGCCCAGGGGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSSISTL*PRGWLW
Trigger: CCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGGA...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACCTCACATAAGCCATTaGCCCACTGTGCAATATAGA +
Preference number: 5 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTPHISH*PTVQYR
Trigger: TCTATATTGCACAGTGGGCAAATGGCTTATGTGAGG...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTGCCAAATGGGGATGGTaGTCCCTGCAACATGGTGCC +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSAKWGW*SLQHGA
Trigger: GGCACCATGTTGCAGGGACAACCATCCCCATTTGGC...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CCA 90 bp TGCTGGTTACTCATGAGCGTGTGCATGCCCAGGATCGATAGAACCTaGGACATGGTAGGTGGTCAAAAGTGTTCAGTCCCTCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: CWLLMSVCMPRIDRT*DMVGGQKCSVPPSP
Trigger: TGGGGAAGGAGGGACTGAACACTTTTGACCACCTACCATGTCCCAGGTTCTATCGATCCTGGGCATGCACACGCTCATGAGTAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTCCGAAGCCGGGGTCCTaGCTGGGTAAAGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSPKPGS*LGKVVA
Trigger: GGCTACCACTTTACCCAGCAAGGACCCCGGCTTCGG...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCCGAAGCCGGGGTCCTaGCTGGGTAAAGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSPKPGS*LGKVVA
Trigger: GGCTACCACTTTACCCAGCAAGGACCCCGGCTTCGG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACTCACAAGGTCATTGTaGTTCATCATTGCGTTGGAT +
Preference number: 5 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTLTRSL*FIIALD
Trigger: ATCCAACGCAATGATGAACAACAATGACCTTGTGAG...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCACTCAGGGACATGTTaGTTGCCTGGGATTGGTAAT +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIHSGTC*LPGIGN
Trigger: ATTACCAATCCCAGGCAACAAACATGTCCCTGAGTG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCGGAGTTTCTTCACCATaGTCCGGCATCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLGVSSP*SGILRR
Trigger: CCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCC...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATGGTGGCTGCCCAGTCTTCTGGCCAGTGTGCCAGGCACATGTCCCTGTCACACAACTGTATAGTTTATaGAACAGCCACACCCATTCC +
Preference number: 5 (lower is better)
Translates to: HGGCPVFWPVCQAHVPVTQLYSL*NSHTHS
Trigger: GGAATGGGTGTGGCTGTTCAATAAACTATACAGTTG...TGTGACAGGGACATGTGCCTGGCACACTGGCCAGAAGACTGGGCAGCCACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGTTGAGCCCCTCCTaGTTCATGATGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLLLSPS*FMMELL
Trigger: CAGCAGCTCCATCATGAACAAGGAGGGGCTCAACAG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTACACCACTCCGGCACTaGGGAATGATGGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSTPLRH*GMMGPV
Trigger: GACTGGGCCCATCATTCCCAAGTGCCGGAGTGGTGT...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAA +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNISGTCL*PGIGNE
Trigger: TTCATTACCAATCCCAGGCAACAAACATGTCCCTGA...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCAAAGGCACAAGGGCATaGTGGCTTAACACTTTTGCT +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIKGTRA*WLNTFA
Trigger: AGCAAAAGTGTTAAGCCACAATGCCCTTGTGCCTTT...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCCTGCATCTGAAGCATTaGCCAAGGCTTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLLHLKH*PRLPPA
Trigger: AGCTGGAGGAAGCCTTGGCAAATGCTTCAGATGCAG...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTGGGCACAGGCTTGTATaGTGTGGGTTTAATCACGCT +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSGHRLV*CGFNHA
Trigger: AGCGTGATTAAACCCACACAATACAAGCCTGTGCCC...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCTACGTCTGTTGAATTaGGTTCTTCGTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSLRLLN*VLRRAQ
Trigger: CTGTGCCCGACGAAGAACCAAATTCAACAGACGTAG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTAACACCTTGTTCTCCTaGAGCATCTCAGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSNTLFS*SISARA
Trigger: TGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTT...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGTCCACCAGAGAAGTGTaGTATGGGAGGGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKSTREV*YGRAST
Trigger: GGTAGAAGCCCTCCCATACAACACTTCTCTGGTGGA...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTAGGGGCTGGCTCTGGTaGTCAATTTTCATTTCCACC +
Preference number: 5 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSRGWLW*SIFIST
Trigger: GGTGGAAATGAAAATTGACAACCAGAGCCAGCCCCT...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCGTTTGTTGCCTGGGATaGGTAATGAAAGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIVCCLG*VMKGWF
Trigger: AAACCAACCTTTCATTACCAATCCCAGGCAACAAAC...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGGAGTTTCTTCACCATaGTCCGGCATCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSGVSSP*SGILRR
Trigger: CCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTCATCTTGGGGTGGTTaGGCCAGGATTTCCCAATTC +
Preference number: 5 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSSWGG*ARISQF
Trigger: GAATTGGGAAATCCTGGCCAAACCACCCCAAGATGA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTGTGGCTTAACACTTTaGCTGGATCCCAAGAGACGC +
Preference number: 5 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSCGLTL*LDPKRR
Trigger: GCGTCTCTTGGGATCCAGCAAAAGTGTTAAGCCACA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCCAACTGTATAGTTTATaGAACAGCCACACCCATTCC +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIQLYSL*NSHTHS
Trigger: GGAATGGGTGTGGCTGTTCAATAAACTATACAGTTG...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTCTGTTGAGCCCCTCCTaGTTCATGATGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSLLSPS*FMMELL
Trigger: CAGCAGCTCCATCATGAACAAGGAGGGGCTCAACAG...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTAGCTTCTGCATATGCCTaGAGGGTGGGGATGGGGATA +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLASAYA*RVGMGI
Trigger: TATCCCCATCCCCACCCTCAAGGCATATGCAGAAGC...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGCATTGTTGTTCATCATaGCGTTGGATGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKHCCSS*RWMPEA
Trigger: GGCTTCGGGCATCCAACGCAATGATGAACAACAATG...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp AGCAAGGCCATTGAAACTGGGCTCCTGGGGCTAAGTCGCTGCTGCTGGAACATCGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SKAIETGLLGLSRCCWNIGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...GATGTTCCAGCAGCAGCGACTTAGCCCCAGGAGCCCAGTTTCAATGGCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS TCA 90 bp TGTATGGGAGGGCTTCTACCAGGCGCAGAATCCCAGCTCCAGAAATaGAGTTGGATTCCACATTCAGTGTCTTCAACACCTTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CMGGLLPGAESQLQK*SWIPHSVSSTPCSP
Trigger: AGGAGAACAAGGTGTTGAAGACACTGAATGTGGAATCCAACTTCATTTCTGGAGCTGGGATTCTGCGCCTGGTAGAAGCCCTCCCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAA +
Preference number: 5 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSSGTCL*PGIGNE
Trigger: TTCATTACCAATCCCAGGCAACAAACATGTCCCTGA...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS TCA 90 bp TGGGTCGTTGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGTTaGATTTGGTTCTTCGTCGGGCACAGGCTTGTATTGTGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: WVVVLYPFQRFLYVC*IWFFVGHRLVLCGF
Trigger: AAACCCACACAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAAAGAACAACGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGCTTCTGCATATGCCTaGAGGGTGGGGATGGGGATA +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQASAYA*RVGMGI
Trigger: TATCCCCATCCCCACCCTCAAGGCATATGCAGAAGC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCGCTTCTGCATATGCCTaGAGGGTGGGGATGGGGATA +
Preference number: 5 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPASAYA*RVGMGI
Trigger: TATCCCCATCCCCACCCTCAAGGCATATGCAGAAGC...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTAGGGGCTGGCTCTGGTaGTCAATTTTCATTTCCACC +
Preference number: 5 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSRGWLW*SIFIST
Trigger: GGTGGAAATGAAAATTGACAACCAGAGCCAGCCCCT...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTCCATTTCCACTTTGTaGCCCAGGGGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETSISTL*PRGWLW
Trigger: CCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGGA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCTTGTTCATCATTGCGTaGGATGCCCGAAGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPLFIIA*DARSRG
Trigger: ACCCCGGCTTCGGGCATCCAACGCAATGATGAACAA...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTTGTTCATCATTGCGTaGGATGCCCGAAGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDLFIIA*DARSRG
Trigger: ACCCCGGCTTCGGGCATCCAACGCAATGATGAACAA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTTTCCTCACAAGGTCATaGTTGTTCATCATTGCGTTG +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSFLTRS*LFIIAL
Trigger: CAACGCAATGATGAACAACAATGACCTTGTGAGGAA...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAACACCACTCCGGCACTaGGGAATGATGGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRTPLRH*GMMGPV
Trigger: GACTGGGCCCATCATTCCCAAGTGCCGGAGTGGTGT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGGTCAGCAGCAATTTGTCTGTTCTGAGGGGAAAATaGTGTTCTGGATCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: PASCGGLIYRRKVSSNLSVLRGK*CSGSSN
Trigger: ATTACTGGATCCAGAACACAATTTTCCCCTCAGAAC...AGACAAATTGCTGCTGACCTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGGAGTTTCTTCACCATaGTCCGGCATCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETGVSSP*SGILRR
Trigger: CCTCCGCAGGATGCCGGACAATGGTGAAGAAACTCC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATGTGGCTTAACACTTTaGCTGGATCCCAAGAGACGC +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLCGLTL*LDPKRR
Trigger: GCGTCTCTTGGGATCCAGCAAAAGTGTTAAGCCACA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGAGTGCTCTGGAGTTCTaGACCTTGTCCTTTATCATG +
Preference number: 5 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKSALEF*TLSFIM
Trigger: CATGATAAAGGACAAGGTCAAGAACTCCAGAGCACT...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGCTCCAGAAATGAAGTaGGATTCCACATTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: WGGLARISQFLDIWSFFTAPEMK*DSTFSV
Trigger: GACACTGAATGTGGAATCCAACTTCATTTCTGGAGC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAATCCACCAGAGAAGTGTaGTATGGGAGGGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQSTREV*YGRAST
Trigger: GGTAGAAGCCCTCCCATACAACACTTCTCTGGTGGA...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTATCTCCATTTCCACTTaGTTGCCCAGGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETISIST*LPRGWL
Trigger: GAGCCAGCCCCTGGGCAACAAAGTGGAAATGGAGAT...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTTGTTCATCATTGCGTaGGATGCCCGAAGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETLFIIA*DARSRG
Trigger: ACCCCGGCTTCGGGCATCCAACGCAATGATGAACAA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCATGCTGCCAGCATTTaGCCTTCTGGTTTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETHAASI*PSGFPC
Trigger: GCAGGGGAAACCAGAAGGCAAAATGCTGGCAGCATG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTTCAGTGTAATCATCTaGGGGTGGTTTGGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSFSVII*GWFGQD
Trigger: ATCCTGGCCAAACCACCCCAAGATGATTACACTGAA...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATTCAGTGTAATCATCTaGGGGTGGTTTGGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLFSVII*GWFGQD
Trigger: ATCCTGGCCAAACCACCCCAAGATGATTACACTGAA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACAGTTCAGTGCGCAGGCCTTCACCTTTTCATCACCAGCCTCTCTGCTCAGTCTGGAGTTCTTGACCTaGTCCTTTATCATGAGATTT +
Preference number: 5 (lower is better)
Translates to: LQFSAQAFTFSSPASLLSLEFLT*SFIMRF
Trigger: AAATCTCATGATAAAGGACAAGGTCAAGAACTCCAG...ACTGAGCAGAGAGGCTGGTGATGAAAAGGTGAAGGCCTGCGCACTGAACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAGTTTCTTCACCATTGTCCGGCATCCTGCGGAGGCTTAATATACAGGCGTAAGAGAATGCAGCTGCAATaGTGTTTTAAGGAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: EFLHHCPASCGGLIYRRKRMQLQ*CFKEKP
Trigger: TGGCTTCTCCTTAAAACACAATTGCAGCTGCATTCT...CTTACGCCTGTATATTAAGCCTCCGCAGGATGCCGGACAATGGTGAAGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCAGAATGCAGCTGCAATaGTGTTTTAAGGAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLRMQLQ*CFKEKP
Trigger: TGGCTTCTCCTTAAAACACAATTGCAGCTGCATTCT...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAGGTTTAATCACGCTGTaGAGCCCCTCCTTGTTCATG +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQGLITL*SPSLFM
Trigger: CATGAACAAGGAGGGGCTCAACAGCGTGATTAAACC...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTCGTCGGGCACAGGCTaGTATTGTGTGGGTTTAATC +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDSSGTG*YCVGLI
Trigger: GATTAAACCCACACAATACAAGCCTGTGCCCGACGA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTATTTCCTCTACGTCTGTaGAATTTGGTTCTTCGTCGG +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLFPLRL*NLVLRR
Trigger: CCGACGAAGAACCAAATTCAACAGACGTAGAGGAAA...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAAAACACCTTGTTCTCCTaGAGCATCTCAGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQNTLFS*SISARA
Trigger: TGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTT...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATCATTGTTGTTCATCATaGCGTTGGATGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDHCCSS*RWMPEA
Trigger: GGCTTCGGGCATCCAACGCAATGATGAACAACAATG...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp GTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCCATTGTTGTTCATCATaGCGTTGGATGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: VDLEIYPSSVLPHISHLPHCCSS*RWMPEA
Trigger: GGCTTCGGGCATCCAACGCAATGATGAACAACAATG...GGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTCCAGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCTTCCTCACAAGGTCATaGTTGTTCATCATTGCGTTG +
Preference number: 5 (lower is better)
Translates to: WGGLARISQFLDIWSFFTFLTRS*LFIIAL
Trigger: CAACGCAATGATGAACAACAATGACCTTGTGAGGAA...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGTTCTGAGGGGAAAATaGTGTTCTGGATCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: WGGLARISQFLDIWSFFTVLRGK*CSGSSN
Trigger: ATTACTGGATCCAGAACACAATTTTCCCCTCAGAAC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTTCACCGTTTGTTGCCTGGGATaGGTAATGAAAGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: WGGLARISQFLDIWSFFTVCCLG*VMKGWF
Trigger: AAACCAACCTTTCATTACCAATCCCAGGCAACAAAC...GGTGAAGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGGGCACAGGCTTGTATaGTGTGGGTTTAATCACGCT +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETGHRLV*CGFNHA
Trigger: AGCGTGATTAAACCCACACAATACAAGCCTGTGCCC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTCCATTTCCACTTTGTaGCCCAGGGGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKSISTL*PRGWLW
Trigger: CCAGAGCCAGCCCCTGGGCAACAAAGTGGAAATGGA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACTCACAAGGTCATTGTaGTTCATCATTGCGTTGGAT +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLLTRSL*FIIALD
Trigger: ATCCAACGCAATGATGAACAACAATGACCTTGTGAG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TGTTTTAAGGAGAAGCCAAATGGGGATGGTTGTCCCTGCAACATGGTGCCACTCGATCCAGTAATCAATTaGGCAACTTTAATCGAGGTT +
Preference number: 5 (lower is better)
Translates to: CFKEKPNGDGCPCNMVPLDPVIN*ATLIEV
Trigger: AACCTCGATTAAAGTTGCCAAATTGATTACTGGATC...GAGTGGCACCATGTTGCAGGGACAACCATCCCCATTTGGCTTCTCCTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTGTTTGTTGCCTGGGATaGGTAATGAAAGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSVCCLG*VMKGWF
Trigger: AAACCAACCTTTCATTACCAATCCCAGGCAACAAAC...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTCATCTTGGGGTGGTTaGGCCAGGATTTCCCAATTC +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETSSWGG*ARISQF
Trigger: GAATTGGGAAATCCTGGCCAAACCACCCCAAGATGA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGCCAAATGGGGATGGTaGTCCCTGCAACATGGTGCC +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKAKWGW*SLQHGA
Trigger: GGCACCATGTTGCAGGGACAACCATCCCCATTTGGC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp CATCTTGGGGTGGTTTGGCCAGGATTTCCCAATTCCTTGATATCTGGAGTTTCTAGAATGCAGCTGCAATaGTGTTTTAAGGAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HLGVVWPGFPNSLISGVSRMQLQ*CFKEKP
Trigger: TGGCTTCTCCTTAAAACACAATTGCAGCTGCATTCT...AGAAACTCCAGATATCAAGGAATTGGGAAATCCTGGCCAAACCACCCCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATTCAAGTTTTGGGTCGTaGTTCTTTATCCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDSSFGS*FFIRSS
Trigger: GCTGGAACGGATAAAGAACAACGACCCAAAACTTGA...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAATCAAGTTTTGGGTCGTaGTTCTTTATCCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQSSFGS*FFIRSS
Trigger: GCTGGAACGGATAAAGAACAACGACCCAAAACTTGA...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAAACACCTTGTTCTCCTaGAGCATCTCAGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRNTLFS*SISARA
Trigger: TGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATGCTCCAGAAATGAAGTaGGATTCCACATTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDAPEMK*DSTFSV
Trigger: GACACTGAATGTGGAATCCAACTTCATTTCTGGAGC...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAAGGGGCTGGCTCTGGTaGTCAATTTTCATTTCCACC +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRRGWLW*SIFIST
Trigger: GGTGGAAATGAAAATTGACAACCAGAGCCAGCCCCT...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCACTCAGGGACATGTTaGTTGCCTGGGATTGGTAAT +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETHSGTC*LPGIGN
Trigger: ATTACCAATCCCAGGCAACAAACATGTCCCTGAGTG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GAAATTTATCCCTCTAGTGTCTTACCTCACATAAGCCATTTGCCCACTGTGCAACCTCACATAAGCCATTaGCCCACTGTGCAATATAGA +
Preference number: 5 (lower is better)
Translates to: EIYPSSVLPHISHLPTVQPHISH*PTVQYR
Trigger: TCTATATTGCACAGTGGGCAAATGGCTTATGTGAGG...TTGCACAGTGGGCAAATGGCTTATGTGAGGTAAGACACTAGAGGGATAAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GTGGCTTCAGTCTGTCTATCTGTTCTGAGGGGAAAATTGTGTTCTGGATCCAGTGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VASVCLSVLRGKLCSGSSGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...ACTGGATCCAGAACACAATTTTCCCCTCAGAACAGATAGACAGACTGAAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp GCTGGATCCCAAGAGACGCACATGATGTTAAAAAGAGATCTGGCAGCAGTACTACTGGAGTTCTTGACCTaGTCCTTTATCATGAGATTT +
Preference number: 5 (lower is better)
Translates to: AGSQETHMMLKRDLAAVLLEFLT*SFIMRF
Trigger: AAATCTCATGATAAAGGACAAGGTCAAGAACTCCAG...TAGTACTGCTGCCAGATCTCTTTTTAACATCATGTGCGTCTCTTGGGATCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CCA 90 bp GATGGGGATATTCCGGATATTATTGAGGTTAACTTCTTCAAGTTTTaGGTCGTTGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGT +
Preference number: 5 (lower is better)
Translates to: DGDIPDIIEVNFFKF*VVVLYPFQRFLYVC
Trigger: ACAGACGTAGAGGAAACGCTGGAACGGATAAAGAACAACGACCCAAAACTTGAAGAAGTTAACCTCAATAATATCCGGAATATCCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTCAAGTTTTGGGTCGTaGTTCTTTATCCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETSSFGS*FFIRSS
Trigger: GCTGGAACGGATAAAGAACAACGACCCAAAACTTGA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACTCCACCAGAGAAGTGTaGTATGGGAGGGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYSTREV*YGRAST
Trigger: GGTAGAAGCCCTCCCATACAACACTTCTCTGGTGGA...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTTCAGGGACATGTTTGTaGCCTGGGATTGGTAATGAA +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETSGTCL*PGIGNE
Trigger: TTCATTACCAATCCCAGGCAACAAACATGTCCCTGA...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTCGTCGGGCACAGGCTaGTATTGTGTGGGTTTAATC +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKSSGTG*YCVGLI
Trigger: GATTAAACCCACACAATACAAGCCTGTGCCCGACGA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACCTACGTCTGTTGAATTaGGTTCTTCGTCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYLRLLN*VLRRAQ
Trigger: CTGTGCCCGACGAAGAACCAAATTCAACAGACGTAG...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATTTCCTCTACGTCTGTaGAATTTGGTTCTTCGTCGG +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRFPLRL*NLVLRR
Trigger: CCGACGAAGAACCAAATTCAACAGACGTAGAGGAAA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTCTCACAAGGTCATTGTaGTTCATCATTGCGTTGGAT +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETLTRSL*FIIALD
Trigger: ATCCAACGCAATGATGAACAACAATGACCTTGTGAG...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGACCTCACATAAGCCATTaGCCCACTGTGCAATATAGA +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRPHISH*PTVQYR
Trigger: TCTATATTGCACAGTGGGCAAATGGCTTATGTGAGG...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGATTCCTCACAAGGTCATaGTTGTTCATCATTGCGTTG +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRFLTRS*LFIIAL
Trigger: CAACGCAATGATGAACAACAATGACCTTGTGAGGAA...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TCTCTCTGGGAGCTTCATATAAGCTCGGTGACATTTGAGCCACAGTTTTTAGATGATCCAGTAATCAATTaGGCAACTTTAATCGAGGTT +
Preference number: 5 (lower is better)
Translates to: SLWELHISSVTFEPQFLDDPVIN*ATLIEV
Trigger: AACCTCGATTAAAGTTGCCAAATTGATTACTGGATC...ATCTAAAAACTGTGGCTCAAATGTCACCGAGCTTATATGAAGCTCCCAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS-3UTR CAA 90 bp TCAGGGACATGTTTGTTGCCTGGGATTGGTAATGAAAGGTTGGTTTTTGAAACTGGATTTCCCAATTCCTaGATATCTGGAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SGTCLLPGIGNERLVFETGFPNS*ISGVSS
Trigger: TGAAGAAACTCCAGATATCAAGGAATTGGGAAATCC...AGTTTCAAAAACCAACCTTTCATTACCAATCCCAGGCAACAAACATGTCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGTTTCCTCTACGTCTGTaGAATTTGGTTCTTCGTCGG +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKFPLRL*NLVLRR
Trigger: CCGACGAAGAACCAAATTCAACAGACGTAGAGGAAA...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGCTCCAGAAATGAAGTaGGATTCCACATTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKAPEMK*DSTFSV
Trigger: GACACTGAATGTGGAATCCAACTTCATTTCTGGAGC...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACAAAAGGAATCTCATGTaGACTCCTGGCAGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYKRNLM*TPGRVQ
Trigger: CTGAACTCTGCCAGGAGTCAACATGAGATTCCTTTT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TTACTAAATACCATAGCCATGTTGATCTGGAAATTTATCCCTCTAGTGTCTTACAGTGCTCTGGAGTTCTaGACCTTGTCCTTTATCATG +
Preference number: 5 (lower is better)
Translates to: LLNTIAMLIWKFIPLVSYSALEF*TLSFIM
Trigger: CATGATAAAGGACAAGGTCAAGAACTCCAGAGCACT...GTAAGACACTAGAGGGATAAATTTCCAGATCAACATGGCTATGGTATTTAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp TATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGGAGAGATCCAGTAATCAATTaGGCAACTTTAATCGAGGTT +
Preference number: 5 (lower is better)
Translates to: YIAVFSDAECSCNCVLRRDPVIN*ATLIEV
Trigger: AACCTCGATTAAAGTTGCCAAATTGATTACTGGATC...TCTCCTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS-3UTR CAA 90 bp ATATTATATTGCAGTTTTCAGCGATGCAGAATGCAGCTGCAATTGTGTTTTAAGCTGGAGTTCTTGACCTaGTCCTTTATCATGAGATTT +
Preference number: 5 (lower is better)
Translates to: ILYCSFQRCRMQLQLCFKLEFLT*SFIMRF
Trigger: AAATCTCATGATAAAGGACAAGGTCAAGAACTCCAG...CTTAAAACACAATTGCAGCTGCATTCTGCATCGCTGAAAACTGCAATATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS TCA 72 bp CCGCCACACACTAGACACCACTCCGGCACTTGGGAATaGTGGGCCCAGTCAGGTCCGCAAGCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PPHTRHHSGTWE*WAQSGPQASSS
Trigger: GGAAGAGGAGGCTTGCGGACCTGACTGGGCCCATCATTCCCAAGTGCCGGAGTGGTGTCTAGTGTGTGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS GCA 72 bp GGGCGCCTTGGTGGTCTGATCCTTCTGCCTCAGGCCTaGAGGCAGCAGTGCATTATCAGGGTCCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: GRLGGLILLPQA*RQQCIIRVQLI
Trigger: GATGAGCTGGACCCTGATAATGCACTGCTGCCTGCAGGCCTGAGGCAGAAGGATCAGACCACCAAGGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS TCA 72 bp TGCTGCTCAGGGCCTGGTAGTACTGCTGGTTACTCATaGGCGTGTGCATGCCCAGGATCGCTGCAATGTCAC +
Preference number: 6 (lower is better)
Translates to: CCSGPGSTAGYS*ACACPGSLQCH
Trigger: GTGACATTGCAGCGATCCTGGGCATGCACACGCTCATGAGTAACCAGCAGTACTACCAGGCCCTGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS TCA 72 bp TGCTGCTCAGGGCCTGGTAGTACTGCTGGTTACTCATaGGCGTGTGCATGCCCAGGATCGATAGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: CCSGPGSTAGYS*ACACPGSIEPG
Trigger: CCCAGGTTCTATCGATCCTGGGCATGCACACGCTCATGAGTAACCAGCAGTACTACCAGGCCCTGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS GCA 72 bp AGCGTCACACTTTCCAGCACAGGATCCAGTGGCTTCTaGTTAGGAACCCAGACCTTTCCTCGTTTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: SVTLSSTGSSGF*LGTQTFPRFSP
Trigger: AGGGGAAAAACGAGGAAAGGTCTGGGTTCCTAAGCAGAAGCCACTGGATCCTGTGCTGGAAAGTGTGACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS GCA 72 bp CCTCACAAGGTCATTGTTGTTCATCATTGCGTTGGATaGCCGAAGCCGGGGTCCTTGCTGGGTAAAGTGGTA +
Preference number: 6 (lower is better)
Translates to: PHKVIVVHHCVG*PKPGSLLGKVV
Trigger: TACCACTTTACCCAGCAAGGACCCCGGCTTCGGGCATCCAACGCAATGATGAACAACAATGACCTTGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp CTCTTCCTCACAAGGTCATTGTTGTTCATCATTGCGTaGGATGCCCGAAGCCGGGGTCCTTGCTGGGTAAAG +
Preference number: 6 (lower is better)
Translates to: LFLTRSLLFIIA*DARSRGPCWVK
Trigger: CTTTACCCAGCAAGGACCCCGGCTTCGGGCATCCAACGCAATGATGAACAACAATGACCTTGTGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 90 bp AGGGGCTGGCTCTGGTTGTCAATTTTCATTTCCACCAGAGAAGTGTaGTATGGGAGGGCTTCTACCAGGCGCAGAATCCCAGCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: RGWLWLSIFISTREV*YGRASTRRRIPAPE
Trigger: TTCTGGAGCTGGGATTCTGCGCCTGGTAGAAGCCCTCCCATACAACACTTCTCTGGTGGAAATGAAAATTGACAACCAGAGCCAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp GATTCCACATTCAGTGTCTTCAACACCTTGTTCTCCTaGAGCATCTCAGCAAGGGCATACGCCACGGGGTCA +
Preference number: 6 (lower is better)
Translates to: DSTFSVFNTLFS*SISARAYATGS
Trigger: TGACCCCGTGGCGTATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTTGAAGACACTGAATGTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS TCA 72 bp ATTCCACATTCAGTGTCTTCAACACCTTGTTCTCCTTaGGCATCTCAGCAAGGGCATACGCCACGGGGTCAT +
Preference number: 6 (lower is better)
Translates to: IPHSVSSTPCSP*ASQQGHTPRGH
Trigger: ATGACCCCGTGGCGTATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTTGAAGACACTGAATGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp ACGTCTGTTGAATTTGGTTCTTCGTCGGGCACAGGCTaGTATTGTGTGGGTTTAATCACGCTGTTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: TSVEFGSSSGTG*YCVGLITLLSP
Trigger: GGGGCTCAACAGCGTGATTAAACCCACACAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 90 bp GTTTCCTCTACGTCTGTTGAATTTGGTTCTTCGTCGGGCACAGGCTaGTATTGTGTGGGTTTAATCACGCTGTTGAGCCCCTCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VSSTSVEFGSSSGTG*YCVGLITLLSPSLF
Trigger: GAACAAGGAGGGGCTCAACAGCGTGATTAAACCCACACAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp TTATCCGTTCCAGCGTTTCCTCTACGTCTGTTGAATTaGGTTCTTCGTCGGGCACAGGCTTGTATTGTGTGG +
Preference number: 6 (lower is better)
Translates to: LSVPAFPLRLLN*VLRRAQACIVW
Trigger: CCACACAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 90 bp TTGGGTCGTTGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGTaGAATTTGGTTCTTCGTCGGGCACAGGCTTGTATTGTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: LGRCSLSVPAFPLRL*NLVLRRAQACIVWV
Trigger: AACCCACACAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAAAGAACAACGACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS TCA 72 bp GTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGTTaGATTTGGTTCTTCGTCGGGCACAGGCTTGTATTG +
Preference number: 6 (lower is better)
Translates to: VLYPFQRFLYVC*IWFFVGHRLVL
Trigger: CAATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp GGGGACCAGATCTTCTCGGTCCTTAAACTCCTTTGCTaGCTTTTCCAAGTGATCCAAGAGCTCCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GDQIFSVLKLLC*LFQVIQELLSF
Trigger: AAAAGAGAGGAGCTCTTGGATCACTTGGAAAAGCAAGCAAAGGAGTTTAAGGACCGAGAAGATCTGGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS CAA 72 bp ATGAAGTTGGATTCCACATTCAGTGTCTTCAACACCTaGTTCTCCTTGAGCATCTCAGCAAGGGCATACGCC +
Preference number: 6 (lower is better)
Translates to: MKLDSTFSVFNT*FSLSISARAYA
Trigger: GGCGTATGCCCTTGCTGAGATGCTCAAGGAGAACAAGGTGTTGAAGACACTGAATGTGGAATCCAACTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS GCA 72 bp GTGGTCAAAAGTGTTCAGTCCCTCCTTCCCCAGAGATaGTGCCATCTTTCAAATGTCCAACATCAAATGACA +
Preference number: 6 (lower is better)
Translates to: VVKSVQSLLPQR*CHLSNVQHQMT
Trigger: TGTCATTTGATGTTGGACATTTGAAAGATGGCAGCATCTCTGGGGAAGGAGGGACTGAACACTTTTGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375175.1
CDS CCA 72 bp CACGGTATTTCTCTAGTTCTCGTCTGTACGACATCGTaGAAGAACTTGTCTGTGTCTCCTGAATTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: HGISLVLVCTTS*KNLSVSPEFLC
Trigger: GCACAGAAATTCAGGAGACACAGACAAGTTCTTCCACGATGTCGTACAGACGAGAACTAGAGAAATACCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259365.9
ENST00000395211.6
CDS CAA 72 bp TGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGTaGAATTTGGTTCTTCGTCGGGCACAGGCTTGTATT +
Preference number: 6 (lower is better)
Translates to: CSLSVPAFPLRL*NLVLRRAQACI
Trigger: AATACAAGCCTGTGCCCGACGAAGAACCAAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CCA 72 bp ATTCCGGATATTATTGAGGTTAACTTCTTCAAGTTTTaGGTCGTTGTTCTTTATCCGTTCCAGCGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: IPDIIEVNFFKF*VVVLYPFQRFL
Trigger: GAGGAAACGCTGGAACGGATAAAGAACAACGACCCAAAACTTGAAGAAGTTAACCTCAATAATATCCGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 72 bp ATATTATTGAGGTTAACTTCTTCAAGTTTTGGGTCGTaGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCT +
Preference number: 6 (lower is better)
Translates to: ILLRLTSSSFGS*FFIRSSVSSTS
Trigger: AGACGTAGAGGAAACGCTGGAACGGATAAAGAACAACGACCCAAAACTTGAAGAAGTTAACCTCAATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6
CDS CAA 90 bp ATATTCCGGATATTATTGAGGTTAACTTCTTCAAGTTTTGGGTCGTaGTTCTTTATCCGTTCCAGCGTTTCCTCTACGTCTGTTGAATTT +
Preference number: 6 (lower is better)
Translates to: IFRILLRLTSSSFGS*FFIRSSVSSTSVEF
Trigger: AAATTCAACAGACGTAGAGGAAACGCTGGAACGGATAAAGAACAACGACCCAAAACTTGAAGAAGTTAACCTCAATAATATCCGGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259365.9
ENST00000375175.1
ENST00000395211.6