Pregenerated sensors for TMEM88B (Homo sapiens)

Ensembl gene IDs: ENSG00000205116

Ensembl transcript IDs: ENST00000378821.4

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CAGCGAGAGAAGCCCGAACACGATGAGCGCCGCGGAGCCGCGGTCTaGGAACAGCGCGCGGCACCGGGGACCCGGAGCGGGGTGGACCCT	+
Preference number: 5 (lower is better) Translates to: QREKPEHDERRGAAV*EQRAAPGTRSGVDP Trigger: AGGGTCCACCCCGCTCCGGGTCCCCGGTGCCGCGCGCTGTTCTCAGACCGCGGCTCCGCGGCGCTCATCGTGTTCGGGCTTCTCTCGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 90 bp	AGGCGAGCACCAGCAGCGGCGGCAGCGAGAGAAGCCCGAACACGATaGGCGCCGCGGAGCCGCGGTCTGAGAACAGCGCGCGGCACCGGG	+
Preference number: 5 (lower is better) Translates to: RRAPAAAAAREARTR*APRSRGLRTARGTG Trigger: CCCGGTGCCGCGCGCTGTTCTCAGACCGCGGCTCCGCGGCGCTCATCGTGTTCGGGCTTCTCTCGCTGCCGCCGCTGCTGGTGCTCGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 90 bp	TGGGCTTCTGGAACCCTGGGCTTGGCCGAGCGTGGGTGTCTCCCCTaGGAGCCCCAGAGCCCTGGACGATGGAGGCCGGGACCTGGGCAG	+
Preference number: 5 (lower is better) Translates to: WASGTLGLAERGCLP*EPQSPGRWRPGPGQ Trigger: CTGCCCAGGTCCCGGCCTCCATCGTCCAGGGCTCTGGGGCTCCCAGGGGAGACACCCACGCTCGGCCAAGCCCAGGGTTCCAGAAGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 90 bp	CCCCCTCCTCCTCCTCCGTCTCCCTCCCCTGCTCACTCATGCTCCTaGCACTGCAGGCCTGTGGCCCGGGCGGTGCTCAATGCAGAGTGG	+
Preference number: 5 (lower is better) Translates to: PPPPPPSPSPAHSCS*HCRPVARAVLNAEW Trigger: CCACTCTGCATTGAGCACCGCCCGGGCCACAGGCCTGCAGTGGCAGGAGCATGAGTGAGCAGGGGAGGGAGACGGAGGAGGAGGAGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 90 bp	CGTCTCCCTCCCCTGCTCACTCATGCTCCTGCCACTGCAGGCCTGTaGCCCGGGCGGTGCTCAATGCAGAGTGGTGCTCTCCAGGGCTGC	+
Preference number: 5 (lower is better) Translates to: RLPPLLTHAPATAGL*PGRCSMQSGALQGC Trigger: GCAGCCCTGGAGAGCACCACTCTGCATTGAGCACCGCCCGGGCCACAGGCCTGCAGTGGCAGGAGCATGAGTGAGCAGGGGAGGGAGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 90 bp	TGCCACTGCAGGCCTGTGGCCCGGGCGGTGCTCAATGCAGAGTGGTaGTCTCCAGGGCTGCCCTGGAAGACCTTTAACCCCGCCCCACGT	+
Preference number: 5 (lower is better) Translates to: CHCRPVARAVLNAEW*SPGLPWKTFNPAPR Trigger: ACGTGGGGCGGGGTTAAAGGTCTTCCAGGGCAGCCCTGGAGAGCACCACTCTGCATTGAGCACCGCCCGGGCCACAGGCCTGCAGTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 90 bp	TCCTGCCACTGCAGGCCTGTGGCCCGGGCGGTGCTCAATGCAGAGTaGTGCTCTCCAGGGCTGCCCTGGAAGACCTTTAACCCCGCCCCA	+
Preference number: 5 (lower is better) Translates to: SCHCRPVARAVLNAE*CSPGLPWKTFNPAP Trigger: TGGGGCGGGGTTAAAGGTCTTCCAGGGCAGCCCTGGAGAGCACCACTCTGCATTGAGCACCGCCCGGGCCACAGGCCTGCAGTGGCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 90 bp	CTGTGGCCCGGGCGGTGCTCAATGCAGAGTGGTGCTCTCCAGGGCTaGCCTGGAAGACCTTTAACCCCGCCCCACGTTGCAGCCAGTCCA	+
Preference number: 5 (lower is better) Translates to: LWPGRCSMQSGALQG*PGRPLTPPHVAASP Trigger: TGGACTGGCTGCAACGTGGGGCGGGGTTAAAGGTCTTCCAGGGCAGCCCTGGAGAGCACCACTCTGCATTGAGCACCGCCCGGGCCACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 90 bp	GCCCGGGCGGTGCTCAATGCAGAGTGGTGCTCTCCAGGGCTGCCCTaGAAGACCTTTAACCCCGCCCCACGTTGCAGCCAGTCCACATCC	+
Preference number: 5 (lower is better) Translates to: ARAVLNAEWCSPGLP*KTFNPAPRCSQSTS Trigger: GGATGTGGACTGGCTGCAACGTGGGGCGGGGTTAAAGGTCTTCCAGGGCAGCCCTGGAGAGCACCACTCTGCATTGAGCACCGCCCGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 90 bp	GCACAGCTAGGACGCGCTGGTGAGACCAAGGAACACCAAAGTCAGTaGGGAGATCTTAGTGTCTCCCGGAGAGAGCCGACCGAGGCTGGC	+
Preference number: 5 (lower is better) Translates to: AQLGRAGETKEHQSQ*GDLSVSRREPTEAG Trigger: GCCAGCCTCGGTCGGCTCTCTCCGGGAGACACTAAGATCTCCTCACTGACTTTGGTGTTCCTTGGTCTCACCAGCGCGTCCTAGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 90 bp	ACAATTGTTGAGGGATTTCCAGAGCTGATGAACGTTGTGGACCTGTaGCTTACACCAAACAGGGTGGGTGTGAGCTCGGCACAGCTAGGA	+
Preference number: 5 (lower is better) Translates to: TIVEGFPELMNVVDL*LTPNRVGVSSAQLG Trigger: TCCTAGCTGTGCCGAGCTCACACCCACCCTGTTTGGTGTAAGCCACAGGTCCACAACGTTCATCAGCTCTGGAAATCCCTCAACAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 72 bp	AAGCCCGAACACGATGAGCGCCGCGGAGCCGCGGTCTaGGAACAGCGCGCGGCACCGGGGACCCGGAGCGGG	+
Preference number: 6 (lower is better) Translates to: KPEHDERRGAAV*EQRAAPGTRSG Trigger: CCCGCTCCGGGTCCCCGGTGCCGCGCGCTGTTCTCAGACCGCGGCTCCGCGGCGCTCATCGTGTTCGGGCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 72 bp	CCAGCAGCGGCGGCAGCGAGAGAAGCCCGAACACGATaGGCGCCGCGGAGCCGCGGTCTGAGAACAGCGCGC	+
Preference number: 6 (lower is better) Translates to: PAAAAAREARTR*APRSRGLRTAR Trigger: GCGCGCTGTTCTCAGACCGCGGCTCCGCGGCGCTCATCGTGTTCGGGCTTCTCTCGCTGCCGCCGCTGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 72 bp	CCGGAGAGAGCCGACCGAGGCTGGCGCATGTCTGAATaGGAGCCTGGCCATAGGCTGAGCCCGGCTGCCGCC	+
Preference number: 6 (lower is better) Translates to: PERADRGWRMSE*EPGHRLSPAAA Trigger: GGCGGCAGCCGGGCTCAGCCTATGGCCAGGCTCGCATTCAGACATGCGCCAGCCTCGGTCGGCTCTCTCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 72 bp	CCGTCTCCCTCCCCTGCTCACTCATGCTCCTGCCACTaGAGGCCTGTGGCCCGGGCGGTGCTCAATGCAGAG	+
Preference number: 6 (lower is better) Translates to: PSPSPAHSCSCH*RPVARAVLNAE Trigger: CTCTGCATTGAGCACCGCCCGGGCCACAGGCCTGCAGTGGCAGGAGCATGAGTGAGCAGGGGAGGGAGACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 72 bp	CAGCCAGTCCACATCCCCCAGCCAGACCGTGGACCCTaGCTAGGGAGGTCCTGCCCTGATGTCTGTCCCAGA	+
Preference number: 6 (lower is better) Translates to: QPVHIPQPDRGP*LGRSCPDVCPR Trigger: TCTGGGACAGACATCAGGGCAGGACCTCCCTAGCCAGGGTCCACGGTCTGGCTGGGGGATGTGGACTGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 72 bp	GGTGGGTGTGAGCTCGGCACAGCTAGGACGCGCTGGTaGGACCAAGGAACACCAAAGTCAGTGAGGAGATCT	+
Preference number: 6 (lower is better) Translates to: GGCELGTARTRW*DQGTPKSVRRS Trigger: AGATCTCCTCACTGACTTTGGTGTTCCTTGGTCTCACCAGCGCGTCCTAGCTGTGCCGAGCTCACACCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS GCA 72 bp	TTGAGACGGAGCCTCGCTCTTTCGCCCAAGCTAGAGTaGAGTGGCGTGATCTTGGCTCACTGCAAGCTTTGC	+
Preference number: 6 (lower is better) Translates to: LRRSLALSPKLE*SGVILAHCKLC Trigger: GCAAAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCTAGCTTGGGCGAAAGAGCGAGGCTCCGTCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS CCA 72 bp	GAGGGATTTCCAGAGCTGATGAACGTTGTGGACCTGTaGCTTACACCAAACAGGGTGGGTGTGAGCTCGGCA	+
Preference number: 6 (lower is better) Translates to: EGFPELMNVVDL*LTPNRVGVSSA Trigger: TGCCGAGCTCACACCCACCCTGTTTGGTGTAAGCCACAGGTCCACAACGTTCATCAGCTCTGGAAATCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 72 bp	GGAGAAGGAATTCGTGGTGAAACTGGACACAATTGTTaGGGGATTTCCAGAGCTGATGAACGTTGTGGACCT	+
Preference number: 6 (lower is better) Translates to: GEGIRGETGHNC*GISRADERCGP Trigger: AGGTCCACAACGTTCATCAGCTCTGGAAATCCCTCAACAATTGTGTCCAGTTTCACCACGAATTCCTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378821.4
CDS TCA 72 bp	CCCAAGTTGGACCTCAGAATTGTCTCCGATAACAGCTaGCAATTAAACAACCAAACGTTCAGAGAAACACCA	+
Preference number: 6 (lower is better) Translates to: PKLDLRIVSDNS*QLNNQTFRETP Trigger: TGGTGTTTCTCTGAACGTTTGGTTGTTTAATTGTCAGCTGTTATCGGAGACAATTCTGAGGTCCAACTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378821.4

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