Pregenerated sensors for TMEM86B (Homo sapiens)
Ensembl gene IDs: ENSG00000180089Ensembl transcript IDs: ENST00000327042.5, ENST00000585416.1, ENST00000589190.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCCTCAAACGTCTTCAGCCAGAAGCGACGGCGGCAGCGGCGCCTaGAGACAGGCGTCAGGAAGCTTCGCTGCTGAGGGTATTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RPQTSSARSDGGSGA*RQASGSFAAEGISQ Trigger: CTGAGAAATACCCTCAGCAGCGAAGCTTCCTGACGCCTGTCTGCAGGCGCCGCTGCCGCCGTCGCTTCTGGCTGAAGACGTTTGAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR CCA 90 bp | ACCAGAGGGCCATGGAGGGTCCCACTGGGCACCAGGCCTGGTCCATaGGGAGCGACAAAGAACCTTCTGCTGTCATTAACCGCGATGGTT | + |
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Preference number: 1 (lower is better) Translates to: TRGPWRVPLGTRPGP*GATKNLLLSLTAMV Trigger: AACCATCGCGGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGGACCCTCCATGGCCCTCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR-3UTR TCA 90 bp | CCCACTGGGCACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTCTGCTGTCCAGGAGGAGAGGGCCTaGACACCGGCCCTTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: PTGHQAWSMGSDKEPSAVQEERA*TPALQA Trigger: AGCTTGAAGGGCCGGTGTTCAGGCCCTCTCCTCCTG...GACAGCAGAAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGTCCCACTGGGCACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTGAGGAGCCAGGGATCTaGAGTCAGAACCGGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WRVPLGTRPGPWGATKNLEEPGI*SQNRGK Trigger: CTTCCCCCGGTTCTGACTCCAGATCCCTGGCTCCTC...AAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGGACCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCACAGGGCCGGGGGAAGGCAGCTaGAACCCAGTAGTGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PRGLSYGNSNIYGSTPTGPGEGS*NPVVDL Trigger: CAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCCGG...CCCTGTGGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR-3UTR TCA 90 bp | AATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGACGGCGGCAGCGGCAGGAAGCTTCGCTGCTaGGGGTATTTCTCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NSANRPQTSSARSDGGSGRKLRC*GYFSGW Trigger: CCAGCCTGAGAAATACCCTCAGCAGCGAAGCTTCCT...GCCGCTGCCGCCGTCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCACAGGGAAAACGGATGGCTCCATGTGGGCCTaGCTGAGGAGCCAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: LSYGNSNIYGSTPTGKTDGSMWA*LRSQGS Trigger: AGATCCCTGGCTCCTCAGCCAGGCCCACATGGAGCC...ATCCGTTTTCCCTGTGGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR CAA 90 bp | CTGGAGTCAGAACCGGGGGAAGGCAGCTGGAACCCAGTAGTGGACTaGGAATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGA | + |
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Preference number: 2 (lower is better) Translates to: LESEPGEGSWNPVVD*EFRKSSSNVFSQKR Trigger: TCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATTCCAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCCGGTTCTGACTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR GCA 72 bp | ACGTCTTCAGCCAGAAGCGACGGCGGCAGCGGCGCCTaGAGACAGGCGTCAGGAAGCTTCGCTGCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: TSSARSDGGSGA*RQASGSFAAEG Trigger: ACCCTCAGCAGCGAAGCTTCCTGACGCCTGTCTGCAGGCGCCGCTGCCGCCGTCGCTTCTGGCTGAAGACGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR CCA 72 bp | GGGCTCCATGTGGGCCTGGCTGAGGAGCCAGGGATCTaGAGTCAGAACCGGGGGAAGGCAGCTGGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLHVGLAEEPGI*SQNRGKAAGTQ Trigger: CTGGGTTCCAGCTGCCTTCCCCCGGTTCTGACTCCAGATCCCTGGCTCCTCAGCCAGGCCCACATGGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR CCA 72 bp | CCATGGAGGGTCCCACTGGGCACCAGGCCTGGTCCATaGGGAGCGACAAAGAACCTTCTGCTGTCATTAACC | + |
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Preference number: 3 (lower is better) Translates to: PWRVPLGTRPGP*GATKNLLLSLT Trigger: GGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGGACCCTCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | GCCCAGGTCCTTGCAGGAGGAGAGGGCCTGAACACCGGCCCTTCAAGCTCCCTACGCCATCAGAGAGCGTaGAGAGCAGCGCGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AQVLAGGEGLNTGPSSSLRHQRA*RAARPS Trigger: GCTGGGGCGCGCTGCTCTTCACGCTCTCTGATGGCG...TAGGGAGCTTGAAGGGCCGGTGTTCAGGCCCTCTCCTCCTGCAAGGACCTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | TGGAGGGTCCCACTGGGCACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTGGACGGGCAGGCACTTaGCCAGGGCAGCGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: WRVPLGTRPGPWGATKNLGRAGT*PGQRTR Trigger: CCTGGTTCGCTGCCCTGGTCAAGTGCCTGCCCGTCC...AAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGGACCCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | GACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCCCCCGCTTGGGGACATaGCCCACAGGAACCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DPPRGLSYGNSNIYGSTPPRLGT*PTGTQP Trigger: TGGCTGGGTTCCTGTGGGTCATGTCCCCAAGCGGGG...GGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | CCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCACAGGGCAGGAGGAGAGGGCCTaGACACCGGCCCTTCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PRGLSYGNSNIYGSTPTGQEERA*TPALQA Trigger: AGCTTGAAGGGCCGGTGTTCAGGCCCTCTCCTCCTG...CCCTGTGGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | GACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCGGCCGCGCCACAGCATaGCCATCAGGATCAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: DPPRGLSYGNSNIYGSTPGRATA*PSGSAH Trigger: ATGGGCTGATCCTGATGGCCATGCTGTGGCGCGGCC...GGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | GACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCATCTGGGCGCTGGGCTaGGCAGTGAGTCTTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: DPPRGLSYGNSNIYGSTPIWALG*AVSLQG Trigger: ACCCTGAAGACTCACTGCTCAGCCCAGCGCCCAGAT...GGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | AATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGACGGCGGCAGCGGCCGGGCTCCTGAGGGCTaGCAGTGTGATGAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSANRPQTSSARSDGGSGRAPEG*QCDEEL Trigger: CAGCTCCTCATCACACTGTCAGCCCTCAGGAGCCCG...GCCGCTGCCGCCGTCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | CACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTCTGCTGTCATTAACCGCAGCAGCAGGCCGGGCTaGAGGGGAGAGAAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HQAWSMGSDKEPSAVINRSSRPG*RGEKPK Trigger: CTTCGGCTTCTCTCCCCTGCAGCCCGGCCTGCTGCT...GCGGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | GCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAGGCAGGCTGGTGGCTaGGAGGGCTCCATGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AMVYHNHDPPRGLSYGNSRQAGG*EGSMWA Trigger: GGCCCACATGGAGCCCTCCCAGCCACCAGCCTGCCT...GCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | CTGTCATTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCAGGCTGCCGGCCAGATaGGGCAAGCGTCCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LSLTAMVYHNHDPPRGLSRLPAR*GKRPPQ Trigger: CTGTGGGGGACGCTTGCCTCATCTGGCCGGCAGCCT...GGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAATGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | TGGAGGGTCCCACTGGGCACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTGGTTTATCACAATCATaGCCCTCCCCGAGGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: WRVPLGTRPGPWGATKNLGLSQS*PSPRPL Trigger: GAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACC...AAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTGCCCAGTGGGACCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | GCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAGGGGCTCAGCCACCTaGAGACATCTGGGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AMVYHNHDPPRGLSYGNSRGSAT*RHLGAG Trigger: CCCAGCGCCCAGATGTCTGCAGGTGGCTGAGCCCCT...GCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | CACCAGGCCTGGTCCATGGGGAGCGACAAAGAACCTTCTGCTGTCATTAACCGCGTCATGATCACCAGGTaGGCATGGGGCAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HQAWSMGSDKEPSAVINRVMITR*AWGRGW Trigger: CCAGCCCCTGCCCCATGCCCACCTGGTGATCATGAC...GCGGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | AATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGACGGCGGCAGCGGCGAGGAGCCAGGGATCTaGAGTCAGAACCGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NSANRPQTSSARSDGGSGEEPGI*SQNRGK Trigger: CTTCCCCCGGTTCTGACTCCAGATCCCTGGCTCCTC...GCCGCTGCCGCCGTCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | CTGTCATTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCCCCACCAGAGGGCCATaGAGGGTCCCACTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LSLTAMVYHNHDPPRGLSPTRGP*RVPLGT Trigger: GGTGCCCAGTGGGACCCTCCATGGCCCTCTGGTGGG...GGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAATGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | TTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCTACGGTGCCAGGGACGAAGGCTaGCGGCCAGATGAGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTAMVYHNHDPPRGLSYGARDEG*RPDEAS Trigger: GCTTGCCTCATCTGGCCGGCAGCCTTCGTCCCTGGC...ACCGTAGGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | GGGGGAAGGCAGCTGGAACCCAGTAGTGGACTTGGAATTCCGCAAATCGTCCTCGGTGTAGCCCCCGCTTaGGGACATGACCCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GGRQLEPSSGLGIPQIVLGVAPA*GHDPQE Trigger: TTCCTGTGGGTCATGTCCCCAAGCGGGGGCTACACC...GAGGACGATTTGCGGAATTCCAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | AGCAACATCTACGGTTCCACACCCACAGGGAAAACGGATTCAGAGCAGCAGCAGTGGGAGGGCTCCATGTaGGCCTGGCTGAGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SNIYGSTPTGKTDSEQQQWEGSM*AWLRSQ Trigger: CTGGCTCCTCAGCCAGGCCCACATGGAGCCCTCCCA...CTGCTGCTGCTCTGAATCCGTTTTCCCTGTGGGTGTGGAACCGTAGATGTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | GGGGGAAGGCAGCTGGAACCCAGTAGTGGACTTGGAATTCCGCAAATCGTCCTCGATCAGCCCATAGGCTaGCACCGGCAGGACCATATC | + |
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Preference number: 4 (lower is better) Translates to: GGRQLEPSSGLGIPQIVLDQPIG*HRQDHI Trigger: GATATGGTCCTGCCGGTGGCAGCCTATGGGCTGATC...GAGGACGATTTGCGGAATTCCAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | CTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCACAGGGAAAACGGATAGAGGAGGTGGGCGGTaGCAAAGGCGGCCATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSYGNSNIYGSTPTGKTDRGGGR*QRRPCQ Trigger: CTGGCATGGCCGCCTTTGCCACCGCCCACCTCCTCT...ATCCGTTTTCCCTGTGGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | AGCAACATCTACGGTTCCACACCCACAGGGAAAACGGATTCAGAGCAGCAGCAGGGCTCCATGTGGGCCTaGCTGAGGAGCCAGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SNIYGSTPTGKTDSEQQQGSMWA*LRSQGS Trigger: AGATCCCTGGCTCCTCAGCCAGGCCCACATGGAGCC...CTGCTGCTGCTCTGAATCCGTTTTCCCTGTGGGTGTGGAACCGTAGATGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | GTAGTGGACTTGGAATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGAGGGTCTGCCCCGCTTTaGCAGCGTCCATGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VVDLEFRKSSSNVFSQKRGSAPL*QRPCWP Trigger: AGGCCAGCATGGACGCTGGCAAAGCGGGGCAGACCC...TCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATTCCAAGTCCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | CTGTCATTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCGCGAACCAGGACAGCTaGTCCTCGGGAATCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSLTAMVYHNHDPPRGLSANQDS*SSGIQR Trigger: CCTCTGGATTCCCGAGGACCAGCTGTCCTGGTTCGC...GGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAATGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | GCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCTACGGTAACAGCCATAGTAGGTGGTCATaGTCACCAGGTGGGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: AMVYHNHDPPRGLSYGNSHSRWS*SPGGHG Trigger: CCCATGCCCACCTGGTGATCATGACCACCTACTATG...GCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| 3UTR CAA 72 bp | GAACCGGGGGAAGGCAGCTGGAACCCAGTAGTGGACTaGGAATTCCGCAAATCGTCCTCAAACGTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EPGEGSWNPVVD*EFRKSSSNVFS Trigger: GCTGAAGACGTTTGAGGACGATTTGCGGAATTCCAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCCGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | TTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCTACGGTACCAGGCCTGGTCCATaGGGAGCGACAAAGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: LTAMVYHNHDPPRGLSYGTRPGP*GATKNL Trigger: AAGGTTCTTTGTCGCTCCCCATGGACCAGGCCTGGT...ACCGTAGGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR GCA 90 bp | GTAGTGGACTTGGAATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGAATATCCGGCTCGAGGTaGTGGAGCACAAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VVDLEFRKSSSNVFSQKRISGSR*WSTRLR Trigger: CCTCAGCCTTGTGCTCCAGCACCTCGAGCCGGATAT...TCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATTCCAAGTCCACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CCA 90 bp | TCCATGGGGAGCGACAAAGAACCTTCTGCTGTCATTAACCGCGATGGTTTATCACCGGGGGAAGGCAGCTaGAACCCAGTAGTGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: SMGSDKEPSAVINRDGLSPGEGS*NPVVDL Trigger: CAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCCGG...TGATAAACCATCGCGGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR TCA 90 bp | TCCATGGGGAGCGACAAAGAACCTTCTGCTGTCATTAACCGCGATGGTTTATCAAGGAAGCTTCGCTGCTaGGGGTATTTCTCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SMGSDKEPSAVINRDGLSRKLRC*GYFSGW Trigger: CCAGCCTGAGAAATACCCTCAGCAGCGAAGCTTCCT...TGATAAACCATCGCGGTTAATGACAGCAGAAGGTTCTTTGTCGCTCCCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS TCA 90 bp | GGGGCTGGGCGAAGGTGTCCCAGGCCAGCACGCCATCAGAGAGCGTaGAGAGCAGCGCGCCCCAGCCGGCACTCCCGCCCTGGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GAGRRCPRPARHQRA*RAARPSRHSRPGPG Trigger: GCCTGGCCCAGGGCGGGAGTGCCGGCTGGGGCGCGCTGCTCTTCACGCTCTCTGATGGCGTGCTGGCCTGGGACACCTTCGCCCAGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS CCA 90 bp | CGCCCCAGCCGGCACTCCCGCCCTGGGCCAGGCCGCGCCACAGCATaGCCATCAGGATCAGCCCATAGGCTGCCACCGGCAGGACCATAT | + |
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Preference number: 5 (lower is better) Translates to: RPSRHSRPGPGRATA*PSGSAHRLPPAGPY Trigger: ATATGGTCCTGCCGGTGGCAGCCTATGGGCTGATCCTGATGGCCATGCTGTGGCGCGGCCTGGCCCAGGGCGGGAGTGCCGGCTGGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS CCA 90 bp | GGAGGTGGGCGGTGGCAAAGGCGGCCATGCCTGGCGGGAGAGGGGTaGGGTACCAGTGAGGAAGGCCCATCCTGGGAATGGCCCCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: GGGRWQRRPCLAGEG*GTSEEGPSWEWPRG Trigger: ACCTCGGGGCCATTCCCAGGATGGGCCTTCCTCACTGGTACCCCACCCCTCTCCCGCCAGGCATGGCCGCCTTTGCCACCGCCCACCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS TCA 90 bp | CGGTGGCAAAGGCGGCCATGCCAGGGACGAAGGCTGCCGGCCAGATaGGGCAAGCGTCCCCCACAGCCGAGCACACAAGGGCTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RWQRRPCQGRRLPAR*GKRPPQPSTQGLPG Trigger: TCCAGGGAGCCCTTGTGTGCTCGGCTGTGGGGGACGCTTGCCTCATCTGGCCGGCAGCCTTCGTCCCTGGCATGGCCGCCTTTGCCACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000327042.5 ENST00000589190.1 |
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| CDS GCA 90 bp | GGCCAGGCCGCGCCACAGCATGGCCATCAGGATCAGCCCATAGGCTaGCACCGGCAGGACCATATCCGGCTCGAGGTGCTGGAGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: GQAAPQHGHQDQPIG*HRQDHIRLEVLEHK Trigger: CTTGTGCTCCAGCACCTCGAGCCGGATATGGTCCTGCCGGTGGCAGCCTATGGGCTGATCCTGATGGCCATGCTGTGGCGCGGCCTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS TCA 90 bp | CCAGCCCCAGGCACAGCTCAGAAGGCTCTCACCTGGGCTGAGCAGTaGGTCTTCAGGGTCTGCCCCGCTTTGCCAGCGTCCATGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PAPGTAQKALTWAEQ*VFRVCPALPASMLA Trigger: GGCCAGCATGGACGCTGGCAAAGCGGGGCAGACCCTGAAGACTCACTGCTCAGCCCAGGTGAGAGCCTTCTGAGCTGTGCCTGGGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585416.1 ENST00000589190.1 |
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| CDS TCA 90 bp | GTCACAGCACCTTCCACTCACCAGGGACGAAGGCTGCCGGCCAGATaGGGCAAGCGTCCCCCACAGCCGAGCACACAAGGGCTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VTAPSTHQGRRLPAR*GKRPPQPSTQGLPG Trigger: TCCAGGGAGCCCTTGTGTGCTCGGCTGTGGGGGACGCTTGCCTCATCTGGCCGGCAGCCTTCGTCCCTGGTGAGTGGAAGGTGCTGTGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS-3UTR CAA 90 bp | GACCCTCCCCGAGGCCTCTCCTACGGTAACAGCAACATCTACGGTTCCACACCCAGGGTCTGCCCCGCTTaGCCAGCGTCCATGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: DPPRGLSYGNSNIYGSTPRVCPA*PASMLA Trigger: GGCCAGCATGGACGCTGGCAAAGCGGGGCAGACCCT...GGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCCTCGGGGAGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS CCA 90 bp | CCCAGGCTCCCATCCAAGTGCTGGGGCCTCTCTCACACGGGCATCTaGAAAGCGTCACAGCACCTTCCACTCACCAGGGACGAAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PRLPSKCWGLSHTGI*KASQHLPLTRDEGC Trigger: GCAGCCTTCGTCCCTGGTGAGTGGAAGGTGCTGTGACGCTTTCCAGATGCCCGTGTGAGAGAGGCCCCAGCACTTGGATGGGAGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS GCA 90 bp | GAGCCTCCTTGCAGGTCTCCCCACATGCAGTGTCCATCCTTGCTCTaGTCAGAACTGCCAGGAGGCCCCACCTTCCCTTGGCCTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: EPPCRSPHMQCPSLL*SELPGGPTFPWPPK Trigger: CTTTGGAGGCCAAGGGAAGGTGGGGCCTCCTGGCAGTTCTGAGCAGAGCAAGGATGGACACTGCATGTGGGGAGACCTGCAAGGAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS-3UTR CAA 90 bp | GGGGGAAGGCAGCTGGAACCCAGTAGTGGACTTGGAATTCCGCAAATCGTCCTCCCTAGTCAGTCAGTCTaGGGCACCGGGCTCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGRQLEPSSGLGIPQIVLPSQSV*GTGLLR Trigger: CCTCAGGAGCCCGGTGCCCAAGACTGACTGACTAGG...GAGGACGATTTGCGGAATTCCAAGTCCACTACTGGGTTCCAGCTGCCTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS GCA 90 bp | TGTGACTTCCTCAGTGAGGCCTTCCTCAGCAACCCTGCTTCAAACTaGAGTACCTCCAGCAGGTCCTCACTGCCCTCTGCGCCACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: CDFLSEAFLSNPASN*STSSRSSLPSAPPQ Trigger: CTGAGGTGGCGCAGAGGGCAGTGAGGACCTGCTGGAGGTACTGCAGTTTGAAGCAGGGTTGCTGAGGAAGGCCTCACTGAGGAAGTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS-3UTR CAA 90 bp | CTGTCATTAACCGCGATGGTTTATCACAATCATGACCCTCCCCGAGGCCTCTCCAGGACGGGCAGGCACTaGACCAGGGCAGCGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: LSLTAMVYHNHDPPRGLSRTGRH*TRAANQ Trigger: CTGGTTCGCTGCCCTGGTCAAGTGCCTGCCCGTCCT...GGAGAGGCCTCGGGGAGGGTCATGATTGTGATAAACCATCGCGGTTAATGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS-3UTR CAA 90 bp | GTAGTGGACTTGGAATTCCGCAAATCGTCCTCAAACGTCTTCAGCCAGAAGCGAAACCCAGTAGTGGACTaGGAATTCCGCAAATCGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVDLEFRKSSSNVFSQKRNPVVD*EFRKSS Trigger: GGACGATTTGCGGAATTCCAAGTCCACTACTGGGTT...TCGCTTCTGGCTGAAGACGTTTGAGGACGATTTGCGGAATTCCAAGTCCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327042.5 |
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| CDS CCA 72 bp | GCTACTGCCCTAACACCGCCTGCCCCCACCCCTCGCTaGAGCGTGAGCTGCCTCGGTCACGGCTGCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: ATALTPPAPTPR*SVSCLGHGCAP Trigger: GGGGGCGCAGCCGTGACCGAGGCAGCTCACGCTCCAGCGAGGGGTGGGGGCAGGCGGTGTTAGGGCAGTAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CCA 72 bp | CGGCACTCCCGCCCTGGGCCAGGCCGCGCCACAGCATaGCCATCAGGATCAGCCCATAGGCTGCCACCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RHSRPGPGRATA*PSGSAHRLPPA Trigger: TGCCGGTGGCAGCCTATGGGCTGATCCTGATGGCCATGCTGTGGCGCGGCCTGGCCCAGGGCGGGAGTGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS TCA 72 bp | CGAAGGTGTCCCAGGCCAGCACGCCATCAGAGAGCGTaGAGAGCAGCGCGCCCCAGCCGGCACTCCCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRCPRPARHQRA*RAARPSRHSRP Trigger: AGGGCGGGAGTGCCGGCTGGGGCGCGCTGCTCTTCACGCTCTCTGATGGCGTGCTGGCCTGGGACACCTTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS TCA 72 bp | AGGCGGCCATGCCAGGGACGAAGGCTGCCGGCCAGATaGGGCAAGCGTCCCCCACAGCCGAGCACACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRPCQGRRLPAR*GKRPPQPSTQG Trigger: CCCTTGTGTGCTCGGCTGTGGGGGACGCTTGCCTCATCTGGCCGGCAGCCTTCGTCCCTGGCATGGCCGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000327042.5 ENST00000589190.1 |
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| CDS TCA 72 bp | GCGCCAGCCACCCTGGCCTGCTGGGCTACAAGCACCTaGCACGTCCCTGCCCCGGAGCCTTTACACTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: APATLACWATST*HVPAPEPLHSP Trigger: GGGCGAGTGTAAAGGCTCCGGGGCAGGGACGTGTCAGGTGCTTGTAGCCCAGCAGGCCAGGGTGGCTGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CCA 72 bp | AGAAGCCGAAGGCCCAGACGTAGAGGAGGTGGGCGGTaGCAAAGGCGGCCATGCCTGGCGGGAGAGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RSRRPRRRGGGR*QRRPCLAGEGW Trigger: CCACCCCTCTCCCGCCAGGCATGGCCGCCTTTGCCACCGCCCACCTCCTCTACGTCTGGGCCTTCGGCTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CCA 72 bp | AGAAGCCGAAGGCCCAGACGTAGAGGAGGTGGGCGGTaGCAAAGGCGGCCATGCCAGGGACGAAGGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RSRRPRRRGGGR*QRRPCQGRRLP Trigger: CGGCAGCCTTCGTCCCTGGCATGGCCGCCTTTGCCACCGCCCACCTCCTCTACGTCTGGGCCTTCGGCTTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000327042.5 ENST00000589190.1 |
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| CDS TCA 72 bp | CCTTCCACTCACCAGGGACGAAGGCTGCCGGCCAGATaGGGCAAGCGTCCCCCACAGCCGAGCACACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSTHQGRRLPAR*GKRPPQPSTQG Trigger: CCCTTGTGTGCTCGGCTGTGGGGGACGCTTGCCTCATCTGGCCGGCAGCCTTCGTCCCTGGTGAGTGGAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS GCA 72 bp | GCGCCACAGCATGGCCATCAGGATCAGCCCATAGGCTaGCACCGGCAGGACCATATCCGGCTCGAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: APQHGHQDQPIG*HRQDHIRLEVL Trigger: CAGCACCTCGAGCCGGATATGGTCCTGCCGGTGGCAGCCTATGGGCTGATCCTGATGGCCATGCTGTGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS GCA 72 bp | GGGCTGAGCAGTGAGTCTTCAGGGTCTGCCCCGCTTTaGCAGCGTCCATGCTGGCCTGATAGCCCCAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: GLSSESSGSAPL*QRPCWPDSPRA Trigger: CGCTCTGGGGCTATCAGGCCAGCATGGACGCTGGCAAAGCGGGGCAGACCCTGAAGACTCACTGCTCAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585416.1 ENST00000589190.1 |
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| CDS GCA 72 bp | CCTGGCCTGCTGGGCTACAAGCACCTGACACGTCCCTaGCCCGGAGCCTTTACACTCGCCCTTCCTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PGLLGYKHLTRP*PGAFTLALPPH Trigger: GTGTGGAGGAAGGGCGAGTGTAAAGGCTCCGGGGCAGGGACGTGTCAGGTGCTTGTAGCCCAGCAGGCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CAA 90 bp | GACATGACCCACAGGAACCCAGCCAGGCAGAGGACGGGCAGGCACTaGACCAGGGCAGCGAACCAGGACAGCTGGTCCTCGGGAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: DMTHRNPARQRTGRH*TRAANQDSWSSGIQ Trigger: CTGGATTCCCGAGGACCAGCTGTCCTGGTTCGCTGCCCTGGTCAAGTGCCTGCCCGTCCTCTGCCTGGCTGGGTTCCTGTGGGTCATGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS TCA 72 bp | AGCCCCAGGCACAGCTCAGAAGGCTCTCACCTGGGCTaGGCAGTGAGTCTTCAGGGTCTGCCCCGCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPRHSSEGSHLG*AVSLQGLPRFA Trigger: GGCAAAGCGGGGCAGACCCTGAAGACTCACTGCTCAGCCCAGGTGAGAGCCTTCTGAGCTGTGCCTGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585416.1 ENST00000589190.1 |
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| CDS GCA 72 bp | TCACAGGAGCCCTCTGCACCCAGGCTCCCATCCAAGTaGTGGGGCCTCTCTCACACGGGCATCTGGAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: SQEPSAPRLPSK*WGLSHTGIWKA Trigger: CGCTTTCCAGATGCCCGTGTGAGAGAGGCCCCAGCACTTGGATGGGAGCCTGGGTGCAGAGGGCTCCTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS GCA 72 bp | GTGCCTTTGACCACTGGAGCTCTCACAGGAGCCCTCTaGACCCAGGCTCCCATCCAAGTGCTGGGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VPLTTGALTGAL*TQAPIQVLGPL Trigger: GAGAGGCCCCAGCACTTGGATGGGAGCCTGGGTGCAGAGGGCTCCTGTGAGAGCTCCAGTGGTCAAAGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CCA 72 bp | CAGGAGCCCTCTGCACCCAGGCTCCCATCCAAGTGCTaGGGCCTCTCTCACACGGGCATCTGGAAAGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: QEPSAPRLPSKC*GLSHTGIWKAS Trigger: TGACGCTTTCCAGATGCCCGTGTGAGAGAGGCCCCAGCACTTGGATGGGAGCCTGGGTGCAGAGGGCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CAA 90 bp | AGAGGGCCTGAACACCGGCCCTTCAAGCTCCCTAGTCAGTCAGTCTaGGGCACCGGGCTCCTGAGGGCTGACAGTGTGATGAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RGPEHRPFKLPSQSV*GTGLLRADSVMRSW Trigger: CCAGCTCCTCATCACACTGTCAGCCCTCAGGAGCCCGGTGCCCAAGACTGACTGACTAGGGAGCTTGAAGGGCCGGTGTTCAGGCCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS CCA 72 bp | GGCAGGCACTTGACCAGGGCAGCGAACCAGGACAGCTaGTCCTCGGGAATCCAGAGGCAGAAGTACACGCAG | + |
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Preference number: 6 (lower is better) Translates to: GRHLTRAANQDS*SSGIQRQKYTQ Trigger: CTGCGTGTACTTCTGCCTCTGGATTCCCGAGGACCAGCTGTCCTGGTTCGCTGCCCTGGTCAAGTGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS CAA 72 bp | GAGCTACTGAGCCGAAACCCAGCCCAGCCCCCATTCTaGGGACTCAGATCTCATGGCTCCTGTCCCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: ELLSRNPAQPPF*GLRSHGSCPTP Trigger: GGGGGTGGGACAGGAGCCATGAGATCTGAGTCCCAAGAATGGGGGCTGGGCTGGGTTTCGGCTCAGTAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000585416.1 ENST00000589190.1 |
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| CDS GCA 72 bp | TGCAGGTCTCCCCACATGCAGTGTCCATCCTTGCTCTaGTCAGAACTGCCAGGAGGCCCCACCTTCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CRSPHMQCPSLL*SELPGGPTFPW Trigger: CCAAGGGAAGGTGGGGCCTCCTGGCAGTTCTGAGCAGAGCAAGGATGGACACTGCATGTGGGGAGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CCA 72 bp | CCATCCAAGTGCTGGGGCCTCTCTCACACGGGCATCTaGAAAGCGTCACAGCACCTTCCACTCACCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PSKCWGLSHTGI*KASQHLPLTRD Trigger: GTCCCTGGTGAGTGGAAGGTGCTGTGACGCTTTCCAGATGCCCGTGTGAGAGAGGCCCCAGCACTTGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS CAA 72 bp | GAACACCGGCCCTTCAAGCTCCCTAGTCAGTCAGTCTaGGGCACCGGGCTCCTGAGGGCTGACAGTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: EHRPFKLPSQSV*GTGLLRADSVM Trigger: CATCACACTGTCAGCCCTCAGGAGCCCGGTGCCCAAGACTGACTGACTAGGGAGCTTGAAGGGCCGGTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327042.5 ENST00000585416.1 ENST00000589190.1 |
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| CDS GCA 72 bp | CTCAGTGAGGCCTTCCTCAGCAACCCTGCTTCAAACTaGAGTACCTCCAGCAGGTCCTCACTGCCCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LSEAFLSNPASN*STSSRSSLPSA Trigger: CGCAGAGGGCAGTGAGGACCTGCTGGAGGTACTGCAGTTTGAAGCAGGGTTGCTGAGGAAGGCCTCACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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| CDS GCA 72 bp | GCCCTTCCTCCACACAGGCATACAGCCCTTCAGCTCTaGCCAAATGTGACTTCCTCAGTGAGGCCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ALPPHRHTALQL*PNVTSSVRPSS Trigger: TGAGGAAGGCCTCACTGAGGAAGTCACATTTGGGCAGAGCTGAAGGGCTGTATGCCTGTGTGGAGGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585416.1 |
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