RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM53 (Homo sapiens)

Ensembl gene IDs: ENSG00000126106

Ensembl transcript IDs: ENST00000372235.7, ENST00000372237.8, ENST00000372242.7, ENST00000372243.7, ENST00000372244.3, ENST00000420706.1, ENST00000468117.1, ENST00000476724.1, ENST00000495630.1

Found 488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTaGTGCTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGAT +
Preference number: 1 (lower is better)
Translates to: PRLVAGHPSVPPRGD*CWWGSFVTVLPACD
Trigger: ATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp GCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTaGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGG +
Preference number: 1 (lower is better)
Translates to: AGYPSAGSQEAEAGG*SSIRSTTWGLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp AGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTG +
Preference number: 1 (lower is better)
Translates to: RLVAGHPSVPPRGDC*WWGSFVTVLPACDV
Trigger: CACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp GGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCT +
Preference number: 1 (lower is better)
Translates to: GLCWVSICWKPRGRG*WLVIHPFHHVGTAA
Trigger: AGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp CTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCAT +
Preference number: 1 (lower is better)
Translates to: LVAGHPSVPPRGDCC*WGSFVTVLPACDVH
Trigger: ATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp CTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: LCWVSICWKPRGRGW*LVIHPFHHVGTAAG
Trigger: ACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR TCA 90 bp CGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTaGCACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTA +
Preference number: 1 (lower is better)
Translates to: RATTLLEGGFRGTSS*HVDIGTLVPGLCWV
Trigger: TACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp GCTAGAGCTGTGCCTTCGTTGCAGACTGTGGGGAGCAGGTGGGGATaGCCTGGGCCCAGCATGATCCTGCTCTGCTCTTCACAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: ARAVPSLQTVGSRWG*PGPSMILLCSSQRE
Trigger: TTCCCTCTGTGAAGAGCAGAGCAGGATCATGCTGGGCCCAGGCCATCCCCACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp CCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGGCCATCACCACCCACCTTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: PLAGSEQEMSRHVEH*LSKVEGPSPPTFLP
Trigger: GGGAAGGAAGGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp TGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTaGAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCC +
Preference number: 1 (lower is better)
Translates to: WQEVRMCQLHWDPGG*SDRLLVLCFVFGFP
Trigger: GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp CCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAA +
Preference number: 1 (lower is better)
Translates to: PGRWLPRYKQLTRRH*HSGARPLLGIHLLE
Trigger: TTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp GTGGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCT +
Preference number: 1 (lower is better)
Translates to: VVWTEADTGHHSPGR*LPRYKQLTRRHWHS
Trigger: AGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCCGTATCCGCTTCTGTCCACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp GGGCCCAGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAAC +
Preference number: 1 (lower is better)
Translates to: GPSMILLCSSQREGS*MAEDDAVDIEHENN
Trigger: GTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp AGTGGGAGCCATGTGAATGGTACTTTACACTGTAGGGCTTCGCCCTaGTGGAGCAAAGATCATAGCCCCTATCCGCAGCCTGACGCTACC +
Preference number: 1 (lower is better)
Translates to: SGSHVNGTLHCRASP*WSKDHSPYPQPDAT
Trigger: GGTAGCGTCAGGCTGCGGATAGGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCTACAGTGTAAAGTACCATTCACATGGCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR GCA 90 bp GGACCGCAAAGTCCCAAAGGGCTACAGGGAGTTGAACGAGAAGAGTaGCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTT +
Preference number: 1 (lower is better)
Translates to: GPQSPKGLQGVEREE*PTDCRLWGGVRHLF
Trigger: AAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCTTTGGGACTTTGCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR GCA 90 bp CAACCTCTACAGCCTGCATGCCACAGGAATCAGCAGCCTGACTGTTaGACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACA +
Preference number: 1 (lower is better)
Translates to: QPLQPACHRNQQPDC*TCPNTTDCKAPTDT
Trigger: TGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGGCTGTAGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR CCA 90 bp GCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCTGTaGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGT +
Preference number: 1 (lower is better)
Translates to: ALHRGKAPAWLRMML*TSSMRTTTALRSMS
Trigger: ACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR TCA 90 bp CCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTaGATAAAAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGC +
Preference number: 1 (lower is better)
Translates to: PKEQEVFQDEGQIRH*IKRPMAGKRSGCVS
Trigger: GCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTTTTATTCAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 90 bp AAAACTATTGGGAAGAGGCCCAGGTCTTTGACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCAC +
Preference number: 1 (lower is better)
Translates to: KTIGKRPRSLTSKLV*FKGALELRAHLAHH
Trigger: GTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCTTCCCAATAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 90 bp TCTTTGCTCACTGGATTTTTATTAAACACTGCAAATAGAAAGGTATaGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCA +
Preference number: 1 (lower is better)
Translates to: SLLTGFLLNTANRKV*VDLAPAAAKEWTYS
Trigger: TGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCCAGTGAGCAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR TCA 90 bp CTGGTAACAGGCACAAAGTTTCAGTTATGCAAGATGATGAAGTTCTaGATTATGCAAGATGCAAGACTATTCAGTTCTAGAGGTCTGCCG +
Preference number: 1 (lower is better)
Translates to: LVTGTKFQLCKMMKF*IMQDARLFSSRGLP
Trigger: CGGCAGACCTCTAGAACTGAATAGTCTTGCATCTTGCATAATTCAGAACTTCATCATCTTGCATAACTGAAACTTTGTGCCTGTTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR GCA 90 bp AGTTCTGAATTATGCAAGATGCAAGACTATTCAGTTCTAGAGGTCTaGCGTGCACATAATCTCTTAAATTTTAAGTATCGTACACACTTA +
Preference number: 1 (lower is better)
Translates to: SSELCKMQDYSVLEV*RAHNLLNFKYRTHL
Trigger: TAAGTGTGTACGATACTTAAAATTTAAGAGATTATGTGCACGGCAGACCTCTAGAACTGAATAGTCTTGCATCTTGCATAATTCAGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR TCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGTGGGGCTCCTTTGTaGCCGTGCTGCCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLAGGAPL*PCCLPV
Trigger: CACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACC...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 2 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 2 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGCCTGGGCCCAGCATaGTCCTGCTCTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLAGLGPA*SCSALH
Trigger: GTGAAGAGCAGAGCAGGATCATGCTGGGCCCAGGCC...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTC +
Preference number: 2 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGRGRGW*LVIHPF
Trigger: GAACGGATGGATGACCAGCCACCAGCCTCGGCCTCT...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTCAGGTGGGGATGGCCTaGGCCCAGCATGATCCTGCT +
Preference number: 2 (lower is better)
Translates to: QVCPLCNRPLAGSEQEMSQVGMA*AQHDPA
Trigger: AGCAGGATCATGCTGGGCCCAGGCCATCCCCACCTG...ACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGGAGCTGTGCCTTCGTTaGAGACTGTGGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLELCLR*RLWGAG
Trigger: ACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTC...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCGGGGACTGCTGCTGGTaGGGCTCCTTTGTGACCGTG +
Preference number: 2 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCGDCCW*GSFVTV
Trigger: CACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCC...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCATCCGTTCCACCACGTaGGGACTGCTGCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCIRSTT*GLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGAT...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGGTGCCAGGCCTCTGCTaGGTATCCATCTGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLVPGLC*VSICWK
Trigger: CTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCAC...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGCTTGGGGTCTCCATGTaGTCTCAGCAGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQELGVSM*SQQLLP
Trigger: GGGAAGAAGCTGCTGAGACCACATGGAGACCCCAAG...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGCTGCTGACTGCCCCTaGATCTGTGGGCTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWAADCP*ICGLLG
Trigger: CCCCAAGAGCCCACAGATTCAGGGGCAGTCAGCAGC...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGACAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCT +
Preference number: 2 (lower is better)
Translates to: KGRYVPCATAPWQDRSRRQREGS*MAEDDA
Trigger: AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTG...TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 2 (lower is better)
Translates to: QVCPLCNRPLAGSEQEMSLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...ACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCGGTGGGGCTCCTTTGTaGCCGTGCTGCCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPGGAPL*PCCLPV
Trigger: CACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACC...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCACGAGGTACAAGCAGCTaGCACGTAGACATTGGCACT +
Preference number: 2 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLARGTSS*HVDIGT
Trigger: AGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCG...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCGCTGCTGACTGCCCCTaGATCTGTGGGCTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTAADCP*ICGLLG
Trigger: CCCCAAGAGCCCACAGATTCAGGGGCAGTCAGCAGC...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: SMILLCSSQREGSCMAEDPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...ATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGCGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACC +
Preference number: 2 (lower is better)
Translates to: HSLLGLQRKTIGKRPRSLRGDCC*WGSFVT
Trigger: GGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACG...CAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACATCCGTTCCACCACGTaGGGACTGCTGCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHIRSTT*GLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGAT...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCAGGTGGGGCTCCTTTGTaGCCGTGCTGCCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPGGAPL*PCCLPV
Trigger: CACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACC...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp GTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGAGGGCTACAGGGAGTTaGACGAGAAGAGTGCCCGAC +
Preference number: 2 (lower is better)
Translates to: VQTQLTARLPQTHAQALLRATGS*TRRVPD
Trigger: GTCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCT...CAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR TCA 90 bp AGCCCCTATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCAAGGTTGAGGCTGCAGTaGGCCATGATTGCACCATTG +
Preference number: 2 (lower is better)
Translates to: SPYPQPDATPDRYTFPLARLRLQ*AMIAPL
Trigger: CAATGGTGCAATCATGGCTCACTGCAGCCTCAACCT...TGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR GCA 90 bp GACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: DRLLVLCFVFGFPVQLGLPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...CAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGTTCCCTTCTGACCACTaGTCTCTCCTTTTGCTTTCA +
Preference number: 2 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEFPSDH*SLLLLS
Trigger: TGAAAGCAAAAGGAGAGAGCAGTGGTCAGAAGGGAA...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGCAGGTATGTCCCCTGTaGAACCGCCCCCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: DRLLVLCFVFGFPVQLGLQVCPL*NRPLAG
Trigger: TCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG...CAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTC +
Preference number: 2 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWRGRGW*LVIHPF
Trigger: GAACGGATGGATGACCAGCCACCAGCCTCGGCCTCT...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAG +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWHSPGR*LPRYKQ
Trigger: CTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTG...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGCTGAGGATGATGCTGTaGACATCGAGCATGAGAACA +
Preference number: 2 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLLRMML*TSSMRT
Trigger: TGTTCTCATGCTCGATGTCCACAGCATCATCCTCAG...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCACGGAGGAAGCAAGATaGAGGGCAGGTATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPTEEAR*RAGMSP
Trigger: AGGGGACATACCTGCCCTTCATCTTGCTTCCTCCGT...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGGAAATGGAATTGTaGGGCTGCAAGCTAGGAGTG +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWGEMEL*GCKLGV
Trigger: CACTCCTAGCTTGCAGCCTCACAATTCCATTTCCCC...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
3UTR-3UTR GCA 90 bp GACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGCTGGTGCCAGGCCTCTaGTGGGTATCCATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DRLLVLCFVFGFPVQLGLLVPGL*WVSICW
Trigger: CCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG...CAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CCCAGTCCCCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 2 (lower is better)
Translates to: PSPQRSRRYFKMRARSGTLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...AGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGGGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AGGGCTTCGCCCTGCTGGAGCAAAGATCATAGCCCCTATCCGCAGCCTGACGCTGTTGAACGAGAAGAGTaGCCGACAGATTGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: RASPCWSKDHSPYPQPDAVEREE*PTDCRL
Trigger: CAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAAC...AGCGTCAGGCTGCGGATAGGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR GCA 90 bp AGCCCCTATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCATCAACCTCTACAGCCTaGATGCCACAGGAATCAGCA +
Preference number: 2 (lower is better)
Translates to: SPYPQPDATPDRYTFPLASTSTA*MPQESA
Trigger: TGCTGATTCCTGTGGCATGCAGGCTGTAGAGGTTGA...TGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR CCA 90 bp GACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 2 (lower is better)
Translates to: DRLLVLCFVFGFPVQLGLGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...CAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCACTCATTCCCTCCTTaGGCTCCAGCGGAAAACTAT +
Preference number: 2 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCHSFPP*APAENY
Trigger: ATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTG...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGCTGCCCCTGAATCTGTaGGCTCTTGGGGTCTCCATG +
Preference number: 2 (lower is better)
Translates to: PSACSVLCFRFPRAARIGLPLNL*ALGVSM
Trigger: CATGGAGACCCCAAGAGCCCACAGATTCAGGGGCAG...CCCAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGGGGAAATGGAATTGTaGGGCTGCAAGCTAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPGEMEL*GCKLGV
Trigger: CACTCCTAGCTTGCAGCCTCACAATTCCATTTCCCC...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
3UTR-3UTR GCA 90 bp CTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: LWTSSMRTTTALRSMSGVPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCTGGTGCCAGGCCTCTaGTGGGTATCCATCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SKLVCFKGALELRAHLAHLVPGL*WVSICW
Trigger: CCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG...GTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTCAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCT +
Preference number: 2 (lower is better)
Translates to: LIPSLGSSGKLLGRGPGLQREGS*MAEDDA
Trigger: AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTG...AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQTSKLV*FKGALE
Trigger: CTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGT...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AACCTCTACAGCCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCGAGTGCCCGACAGATTaGAGGTTGTGGGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: NLYSLHATGISSLTVALVECPTD*RLWGGV
Trigger: GACACCTCCCCACAACCTGCAATCTGTCGGGCACTC...GACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGGCTGTAGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR CCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGGGGACTGCTGCTGGTaGGGCTCCTTTGTGACCGTG +
Preference number: 2 (lower is better)
Translates to: PRSLTSKLVCFKGALELRGDCCW*GSFVTV
Trigger: CACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCC...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp TCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTC +
Preference number: 2 (lower is better)
Translates to: SKLVCFKGALELRAHLAHRGRGW*LVIHPF
Trigger: GAACGGATGGATGACCAGCCACCAGCCTCGGCCTCT...GTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 2 (lower is better)
Translates to: PRSLTSKLVCFKGALELRPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CCCAGTCCCCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PSPQRSRRYFKMRARSGTLTRRH*HSGARP
Trigger: AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAG...AGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGGGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGCCAGCGGAAAACTATTaGGAAGAGGCCCAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWPAENY*EEAQVF
Trigger: AAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGG...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGGAGTTAGCTCATCCCAGCCAGACTCCCAGGCAATaGGGTCAGAGGAGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: NPLTLVLVFRAWELAHPSQTPRQ*GQRSLS
Trigger: AGAGAGGCTCCTCTGACCCCATTGCCTGGGAGTCTG...GCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR TCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTCCCGACACTAGCTGCTaGCTGCCCCTGAATCTGTGG +
Preference number: 2 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTPDTSC*LPLNLW
Trigger: CCACAGATTCAGGGGCAGTCAGCAGCTAGTGTCGGG...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGCTCGGATTGGGAAAATaGAACGGAGGAAGCAAGATG +
Preference number: 2 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWLGLGK*NGGSKM
Trigger: CATCTTGCTTCCTCCGTTTCATTTTCCCAATCCGAG...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TTCACTCTCACTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGGAGCTGTGCCTTCGTTaGAGACTGTGGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: FTLTHSLLGLQRKTIGKRELCLR*RLWGAG
Trigger: ACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTC...CCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTGAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAG +
Preference number: 2 (lower is better)
Translates to: DRLLVLCFVFGFPVQLGLHSPGR*LPRYKQ
Trigger: CTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTG...CAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 2 (lower is better)
Translates to: PRSLTSKLVCFKGALELRGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 2 (lower is better)
Translates to: RPRSLTSKLVCFKGALELGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CAA 90 bp CTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTaGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: LRMMLWTSSMRTTTA*RSMSGVDRSGYGPP
Trigger: TGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCCTCGGATTGGGAAAATaGAACGGAGGAAGCAAGATG +
Preference number: 2 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPLGLGK*NGGSKM
Trigger: CATCTTGCTTCCTCCGTTTCATTTTCCCAATCCGAG...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCACTGGCTAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VWVDLAPAAAKEWTYSLASMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...AGCCAGTGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPSMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGG +
Preference number: 2 (lower is better)
Translates to: PSACSVLCFRFPRAARIGRHVEH*LSKVEG
Trigger: CCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCT...CCCAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp ATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGTGGGTATCCATCTGCTaGAAGCCAAGAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: MAEDDAVDIEHENNNRFEWVSIC*KPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCA...CTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCCCAGCGGAAAACTATTaGGAAGAGGCCCAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTPAENY*EEAQVF
Trigger: AAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGG...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCCACTCATTCCCTCCTTaGGCTCCAGCGGAAAACTAT +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTHSFPP*APAENY
Trigger: ATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTG...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CAA 90 bp CAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGACCTCTAAATaGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCA +
Preference number: 2 (lower is better)
Translates to: QRKTIGKRPRSLTSK*VCFKGALELRAHLA
Trigger: TGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CAA 90 bp CTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTaGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LLGLQRKTIGKRPRS*TSKLVCFKGALELR
Trigger: CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp CCCAGTCCCCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTAGAGGCCCAGGTCTTTaGCCTCTAAATTGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PSPQRSRRYFKMRARSGTRGPGL*PLNWFA
Trigger: AGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCT...AGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGGGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCAGAGGCCCAGGTCTTTaGCCTCTAAATTGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTRGPGL*PLNWFA
Trigger: AGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCT...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGTGCTGGGTATCCATCTaGTGGAAGCCAAGAGGCCGA +
Preference number: 2 (lower is better)
Translates to: RPRSLTSKLVCFKGALELCWVSI*WKPRGR
Trigger: TCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCA...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGTGCTGGGTATCCATCTaGTGGAAGCCAAGAGGCCGA +
Preference number: 2 (lower is better)
Translates to: PRSLTSKLVCFKGALELRCWVSI*WKPRGR
Trigger: TCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCA...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGACATTGGCACTCTGGTaGCAGGCCTCTGCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: PRSLTSKLVCFKGALELRTLALW*QASAGY
Trigger: ATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGT...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTACATTGGCACTCTGGTaGCAGGCCTCTGCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTTLALW*QASAGY
Trigger: ATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGT...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GTTTGCTATTTCAGCCCAAATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGATGCCCAGGCACTCCTaGCCCTTAGGATTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: VCYFSPNPLTLVLVFRAWMPRHS*PLGFCG
Trigger: ACCACAGAATCCTAAGGGGCAGGAGTGCCTGGGCAT...CCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATTTGGGCTGAAATAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR CCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCAGAATCTGTGGGCTCTTaGGGTCTCCATGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPESVGS*GLHVVS
Trigger: TGAGACCACATGGAGACCCCAAGAGCCCACAGATTC...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCTTCCCTTCTGACCACTaGTCTCTCCTTTTGCTTTCA +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTFPSDH*SLLLLS
Trigger: TGAAAGCAAAAGGAGAGAGCAGTGGTCAGAAGGGAA...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAATGGGACCCTGGGGGCTaGAGTGACCGTCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKWDPGG*SDRLLV
Trigger: AACAAGCAGACGGTCACTGCAGCCCCCAGGGTCCCA...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGTGCCTGCCTGTGATGTaGATATTAAAATGGATGTAT +
Preference number: 2 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLCLPVM*ILKWMY
Trigger: ATACATCCATTTTAATATGCACATCACAGGCAGGCA...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp CTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: LIPSLGSSGKLLGRGPGLTSKLV*FKGALE
Trigger: CTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGT...AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAATGGGTATCCATCTGCTaGAAGCCAAGAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKWVSIC*KPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCA...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GGATTTTTATTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTCAGGTATGTCCCCTGTaGAACCGCCCCCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GFLLNTANRKVWVDLAPAQVCPL*NRPLAG
Trigger: TCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG...AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GGATTTTTATTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTCGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACC +
Preference number: 2 (lower is better)
Translates to: GFLLNTANRKVWVDLAPARGDCC*WGSFVT
Trigger: GGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACG...AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGCTGAGGATGATGCTGTaGACATCGAGCATGAGAACA +
Preference number: 2 (lower is better)
Translates to: RPRSLTSKLVCFKGALELLRMML*TSSMRT
Trigger: TGTTCTCATGCTCGATGTCCACAGCATCATCCTCAG...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR TCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGGAGGTATTTCAAGATaGGGGCCAGATCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKGGISR*GPDQAL
Trigger: CAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCC...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTTGCCTGCCTGTGATGTaGATATTAAAATGGATGTAT +
Preference number: 2 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTCLPVM*ILKWMY
Trigger: ATACATCCATTTTAATATGCACATCACAGGCAGGCA...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKSMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGG +
Preference number: 2 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKRHVEH*LSKVEG
Trigger: CCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCT...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GGATTTTTATTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GFLLNTANRKVWVDLAPALTRRH*HSGARP
Trigger: AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAG...AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR GCA 90 bp GGATTTTTATTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTAGACCTTGCACCAGCTaGAGCCAAAGAGTGGACTTA +
Preference number: 2 (lower is better)
Translates to: GFLLNTANRKVWVDLAPARPCTS*SQRVDL
Trigger: TAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCT...AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CAA 90 bp AAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGAGAGCTGAGGGCCCACTaGGCACACCACAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: KGRYVPCATAPWQDRSRRELRAH*AHHSWG
Trigger: GCCCCAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTC...TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp GCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: AGHPSVPPRGDC*WWGSFVTVLPA
Trigger: GGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp GTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTaGTGCTGGTGGGGCTCCTTTGTGACCGTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: VAGHPSVPPRGD*CWWGSFVTVLP
Trigger: AGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp GGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGT +
Preference number: 3 (lower is better)
Translates to: GHPSVPPRGDCC*WGSFVTVLPAC
Trigger: ACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp CCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTaGTCATCCATCCGTTCCACCACGTGGGGACTGCTG +
Preference number: 3 (lower is better)
Translates to: PSAGSQEAEAGG*SSIRSTTWGLL
Trigger: CAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTaGAACCGCCCCCTGGCAGGATCGGAGCAGGAGATG +
Preference number: 3 (lower is better)
Translates to: RRKQDEGQVCPL*NRPLAGSEQEM
Trigger: CATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CAA 90 bp CATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGGAGCTGAGGGCCCACTaGGCACACCACAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: HSLLGLQRKTIGKRPRSLELRAH*AHHSWG
Trigger: GCCCCAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTC...CAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp GTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTCCACCACGTGGGGACT +
Preference number: 3 (lower is better)
Translates to: VSICWKPRGRGW*LVIHPFHHVGT
Trigger: AGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp CACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTaGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGC +
Preference number: 3 (lower is better)
Translates to: HVDIGTLVPGLC*VSICWKPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp GGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACG +
Preference number: 3 (lower is better)
Translates to: GVDRSGYGPPLS*KVASEVQAADT
Trigger: CGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCCGTATCCGCTTCTGTCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CAA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCTCCAGCGGAAAACTATaGGGAAGAGGCCCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCSSGKL*GRGPGL
Trigger: AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGA...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR TCA 72 bp ACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTaGCACGTAGACATTGGCACTCTGGTGCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: TLLEGGFRGTSS*HVDIGTLVPGL
Trigger: GAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp GGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGGCCATCACCACCCACC +
Preference number: 3 (lower is better)
Translates to: GSEQEMSRHVEH*LSKVEGPSPPT
Trigger: GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp AGTCCCAAAGGGCTACAGGGAGTTGAACGAGAAGAGTaGCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGG +
Preference number: 3 (lower is better)
Translates to: SPKGLQGVEREE*PTDCRLWGGVR
Trigger: CCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCTTTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR CCA 72 bp TGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCAT +
Preference number: 3 (lower is better)
Translates to: WLPRYKQLTRRH*HSGARPLLGIH
Trigger: ATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp ACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAGCTGACACGTAGACAT +
Preference number: 3 (lower is better)
Translates to: TEADTGHHSPGR*LPRYKQLTRRH
Trigger: ATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCCGTATCCGCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp CAGCCTGACTGTTGCACTTGTCCAAACACAACTGACTaGAAGGCTCCCACAGACACATGCCCAGGCACTCCT +
Preference number: 3 (lower is better)
Translates to: QPDCCTCPNTTD*KAPTDTCPGTP
Trigger: AGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGTGCAACAGTCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR GCA 72 bp CAGCCTGCATGCCACAGGAATCAGCAGCCTGACTGTTaGACTTGTCCAAACACAACTGACTGCAAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: QPACHRNQQPDC*TCPNTTDCKAP
Trigger: GGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR TCA 72 bp ACTCCCAGGCAATGGGGTCAGAGGAGCCTCTCTGAGTaGACTGCCAAGTGGGAGCCATGTGAATGGTACTTT +
Preference number: 3 (lower is better)
Translates to: TPRQWGQRSLSE*TAKWEPCEWYF
Trigger: AAAGTACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGAGGCTCCTCTGACCCCATTGCCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR GCA 72 bp ATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCTGTGGACATCGAGCAT +
Preference number: 3 (lower is better)
Translates to: MILLCSSQREGS*MAEDDAVDIEH
Trigger: ATGCTCGATGTCCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp CATGTGAATGGTACTTTACACTGTAGGGCTTCGCCCTaGTGGAGCAAAGATCATAGCCCCTATCCGCAGCCT +
Preference number: 3 (lower is better)
Translates to: HVNGTLHCRASP*WSKDHSPYPQP
Trigger: AGGCTGCGGATAGGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCTACAGTGTAAAGTACCATTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR CCA 72 bp GTTGAACGAGAAGAGTGCCCGACAGATTGCAGGTTGTaGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: VEREECPTDCRL*GGVRHLFLEQR
Trigger: CCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
3UTR CCA 72 bp CCAAATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTaGGAGTTAGCTCATCCCAGCTCCTGTTACAATGCT +
Preference number: 3 (lower is better)
Translates to: PNPLTLVLVFRA*ELAHPSSCYNA
Trigger: AGCATTGTAACAGGAGCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR-3UTR CAA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 3 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLLKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR TCA 72 bp CAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTaGATAAAAAGGCCAATGGCTGGCAAGAGGTCAGGA +
Preference number: 3 (lower is better)
Translates to: QEVFQDEGQIRH*IKRPMAGKRSG
Trigger: TCCTGACCTCTTGCCAGCCATTGGCCTTTTTATTCAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CAA 90 bp GTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCACTGGCTTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 3 (lower is better)
Translates to: VWVDLAPAAAKEWTYSLALKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...AGCCAGTGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR-3UTR CAA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 3 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTLKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR CCA 72 bp ACTGGATTTTTATTAAACACTGCAAATAGAAAGGTATaGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGG +
Preference number: 3 (lower is better)
Translates to: TGFLLNTANRKV*VDLAPAAAKEW
Trigger: CCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
3UTR GCA 72 bp TTATGCAAGATGCAAGACTATTCAGTTCTAGAGGTCTaGCGTGCACATAATCTCTTAAATTTTAAGTATCGT +
Preference number: 3 (lower is better)
Translates to: LCKMQDYSVLEV*RAHNLLNFKYR
Trigger: ACGATACTTAAAATTTAAGAGATTATGTGCACGGCAGACCTCTAGAACTGAATAGTCTTGCATCTTGCATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGCCGCTTGCGCACCCGTaGCTCACCCGGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQPLAHP*LTRAPP
Trigger: AGGAGGCGCCCGGGTGAGGCACGGGTGCGCAAGCGG...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372244.3
CDS-3UTR GCA 90 bp CCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGGGCCGGAGTGTGAGTTaGCCCTCTGTCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRLVAGHPSVPPRGDCCWGRSVS*PSVPAE
Trigger: CTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCC...CCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGCAGGTGGGGATGGCCTaGGCCCAGCATGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEQVGMA*AQHDPA
Trigger: AGCAGGATCATGCTGGGCCCAGGCCATCCCCACCTG...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGCCTTCCCACCTGGGCTaGGGCTGTTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GWWLVIHPFHHVGTAAGGPSHLG*GCSSGS
Trigger: GGAGCCAGAAGAACAGCCCCAGCCCAGGTGGGAAGG...CCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR GCA 90 bp GGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGCTGGTGCCAGGCCTCTaGTGGGTATCCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GWWLVIHPFHHVGTAAGGLVPGL*WVSICW
Trigger: CCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG...CCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGTGGGACCCTGGGGGCTaGAGTGACCGTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEWDPGG*SDRLLV
Trigger: AACAAGCAGACGGTCACTGCAGCCCCCAGGGTCCCA...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCATCTCCCCGCCAGGACCCGGCGTaGCAGGCGTGCCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: YPQPDATPDRYTFPLASPRQDPA*QACLHH
Trigger: ATGGTGGAGGCACGCCTGGCACGCCGGGTCCTGGCG...GGGAGATGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCCTGTGCTGCCCAGTCTaGCCGGAGTGTGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGLCCPV*PECELP
Trigger: GGGCAACTCACACTCCGGCCAGACTGGGCAGCACAG...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGACGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: KGRYVPCATAPWQDRSRRRGDCC*WGSFVT
Trigger: GGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACG...TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQERGRGW*LVIHPF
Trigger: GAACGGATGGATGACCAGCCACCAGCCTCGGCCTCT...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGACAGGTGGGGATGGCCTaGGCCCAGCATGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: KGRYVPCATAPWQDRSRRQVGMA*AQHDPA
Trigger: AGCAGGATCATGCTGGGCCCAGGCCATCCCCACCTG...TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GGGGTCAGAGGAGCCTCTCTGAGTGAACTGCCAAGTGGGAGCCATGTGAATGGTCTGCCGAGGCCATGGTaGAGGCGCCGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GVRGASLSELPSGSHVNGLPRPW*RRRPRA
Trigger: TGCTCTGGGCCGGCGCCTTCACCATGGCCTCGGCAG...ACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGAGGCTCCTCTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp TGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTAGTCTGGCCGGAGTGTaGGTTGCCCCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CQASAGYPSAGSQEAEAGSLAGV*VAPLSQ
Trigger: CTGGGACAGAGGGGCAACTCACACTCCGGCCAGACT...ACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCAGTCTGGCCGGAGTGTaGGTTGCCCCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALWCQASAGYPSAGSQEASLAGV*VAPLSQ
Trigger: CTGGGACAGAGGGGCAACTCACACTCCGGCCAGACT...GGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGGAGCTGTGCCTTCGTTaGAGACTGTGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GWWLVIHPFHHVGTAAGGELCLR*RLWGAG
Trigger: ACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTC...CCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGGGACTGCTGCTGGTaGGGCTCCTTTGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: RPLLGIHLLEAKRPRLVAGDCCW*GSFVTV
Trigger: CACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCC...AGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTGGGGACTGCTGCTGGTaGGGCTCCTTTGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: QVCPLCNRPLAGSEQEMSGDCCW*GSFVTV
Trigger: CACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCCC...ACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTATCCGTTCCACCACGTaGGGACTGCTGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RPLLGIHLLEAKRPRLVAIRSTT*GLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGAT...AGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 4 (lower is better)
Translates to: ALWCQASAGYPSAGSQEAPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...GGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTCCAAGAGGCCGAGGCTaGTGGCTGGTCATCCATCCG +
Preference number: 4 (lower is better)
Translates to: RPLLGIHLLEAKRPRLVAPRGRG*WLVIHP
Trigger: CGGATGGATGACCAGCCACCAGCCTCGGCCTCTTGG...AGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGGTGCCAGGCCTCTGCTaGGTATCCATCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRLVAGHPSVPPRGDCCWVPGLC*VSICWK
Trigger: CTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCAC...CCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGATGTGTCAGCTCCACTaGGACCCTGGGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQMCQLH*DPGGCS
Trigger: ACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACAT...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGERCQR*CPPHAG
Trigger: GCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTC...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR TCA 90 bp CTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTCTGCCGAGGCCATGGTaGAGGCGCCGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LIPSLGSSGKLLGRGPGLLPRPW*RRRPRA
Trigger: TGCTCTGGGCCGGCGCCTTCACCATGGCCTCGGCAG...AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCGCTGCTGACTGCCCCTaGATCTGTGGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCAADCP*ICGLLG
Trigger: CCCCAAGAGCCCACAGATTCAGGGGCAGTCAGCAGC...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTCCCGACACTAGCTGCTaGCTGCCCCTGAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPLLGIHLLEAKRPRLVAPDTSC*LPLNLW
Trigger: CCACAGATTCAGGGGCAGTCAGCAGCTAGTGTCGGG...AGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AACCTCTACAGCCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCCCGCTTGCGCACCCGTaGCTCACCCGGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NLYSLHATGISSLTVALVPLAHP*LTRAPP
Trigger: AGGAGGCGCCCGGGTGAGGCACGGGTGCGCAAGCGG...GACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGGCTGTAGAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQELTRRH*HSGARP
Trigger: AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAG...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCACTGGCTCTGCCGAGGCCATGGTaGAGGCGCCGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VWVDLAPAAAKEWTYSLALPRPW*RRRPRA
Trigger: TGCTCTGGGCCGGCGCCTTCACCATGGCCTCGGCAG...AGCCAGTGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGGCTCTCAGCTTCGGGTaGTGCATTGAAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLALSFG*CIEGDS
Trigger: GCTGTCACCTTCAATGCATCACCCGAAGCTGAGAGC...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGGATCGGAGCAGGAGATaGGTAGGCATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEDRSRR*VGMWSI
Trigger: AATGCTCCACATGCCTACTCATCTCCTGCTCCGATC...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGCAAGCAGGAGGCCATaGAGAAGACTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ALWCQASAGYPSAGSQEAASRRP*RRLWLQ
Trigger: CTGGAGCCAGAGTCTTCTGCATGGCCTCCTGCTTGC...GGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372244.3
CDS-3UTR GCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGTGCTGGGTATCCATCTaGTGGAAGCCAAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQCWVSI*WKPRGR
Trigger: TCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCA...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCACATTGGCACTCTGGTaGCAGGCCTCTGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGTLALW*QASAGY
Trigger: ATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGT...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCCAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGQREGS*MAEDDA
Trigger: AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTG...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGGGCTTCGCCCTGCTGGAGCAAAGATCATAGCCCCTATCCGCAGCCTGACGCTATGCTGCTGCCTTCCTaGCCCCCACTGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RASPCWSKDHSPYPQPDAMLLPS*PPLSLA
Trigger: TGCCAGAGACAGTGGGGGGCAGGAAGGCAGCAGCAT...AGCGTCAGGCTGCGGATAGGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCCTTGGGGTCTCCATGTaGTCTCAGCAGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGLGVSM*SQQLLP
Trigger: GGGAAGAAGCTGCTGAGACCACATGGAGACCCCAAG...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTCTGCCCCTGAATCTGTaGGCTCTTGGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: QVCPLCNRPLAGSEQEMSLPLNL*ALGVSM
Trigger: CATGGAGACCCCAAGAGCCCACAGATTCAGGGGCAG...ACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGGCAACAGGCGCAGCATaGCGGCCCGGCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ECPTDCRLWGGVRHLFLEATGAA*RPGAPG
Trigger: TCCTGGAGCGCCGGGCCGCCATGCTGCGCCTGTTGC...CTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp GAAGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGCTGCCGAGGCCATGGTaGAGGCGCCGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EECPTDCRLWGGVRHLFLLPRPW*RRRPRA
Trigger: TGCTCTGGGCCGGCGCCTTCACCATGGCCTCGGCAG...CAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp AGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGGTGGGGCTCCTTTGTaGCCGTGCTGCCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SMILLCSSQREGSCMAEDGGAPL*PCCLPV
Trigger: CACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACC...ATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGGCCGGAGTGTGAGTTaGCCCTCTGTCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPGRSVS*PSVPAE
Trigger: CTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCC...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KQLTRRHWHSGARPLLGIPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...GATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCATGCTGGGTATCCATCTaGTGGAAGCCAAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLACWVSI*WKPRGR
Trigger: TCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCA...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCACAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLAQREGS*MAEDDA
Trigger: AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTG...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQERHVEH*LSKVEG
Trigger: CCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCT...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCATCTCCCAGGCTGCCGAGTTTCTaGCTCCTTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YPQPDATPDRYTFPLASPRLPSF*LLPTWA
Trigger: AGCCCAGGTGGGAAGGAGGCAGAAACTCGGCAGCCT...GGGAGATGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGACGCCAGGACCCGGCGTaGCAGGCGTGCCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGRQDPA*QACLHH
Trigger: ATGGTGGAGGCACGCCTGGCACGCCGGGTCCTGGCG...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp AAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGAGCAAGCAGGAGGCCATaGAGAAGACCCTTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KGRYVPCATAPWQDRSRRASRRP*RRPFCG
Trigger: ACCACAAAAGGGTCTTCTGCATGGCCTCCTGCTTGC...TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372243.7
CDS-3UTR CCA 90 bp TGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCTGTGGATCCGTTCCACCACGTaGGGACTGCTGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CSALHRGKAPAWLRMMLWIRSTT*GLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGAT...CCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALWCQASAGYPSAGSQEALTRRH*HSGARP
Trigger: AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAG...GGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAG +
Preference number: 4 (lower is better)
Translates to: QVCPLCNRPLAGSEQEMSHSPGR*LPRYKQ
Trigger: CTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTG...ACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCCTTGGGGTCTCCATGTaGTCTCAGCAGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALWCQASAGYPSAGSQEALGVSM*SQQLLP
Trigger: GGGAAGAAGCTGCTGAGACCACATGGAGACCCCAAG...GGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAATCTGTGGGCTCTTaGGGTCTCCATGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQESVGS*GLHVVS
Trigger: TGAGACCACATGGAGACCCCAAGAGCCCACAGATTC...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GGGGTCAGAGGAGCCTCTCTGAGTGAACTGCCAAGTGGGAGCCATGTGAATGGTCCTTCCCACCTGGGCTaGGGCTGTTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVRGASLSELPSGSHVNGPSHLG*GCSSGS
Trigger: GGAGCCAGAAGAACAGCCCCAGCCCAGGTGGGAAGG...ACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGAGGCTCCTCTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGGCAACAGGCGCAGCATaGCGGCCCGGCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DRLQVVGRCQAFISGAEVATGAA*RPGAPG
Trigger: TCCTGGAGCGCCGGGCCGCCATGCTGCGCCTGTTGC...CACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp CCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGAGTCTGGCCGGAGTGTaGGTTGCCCCTCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSACSVLCFRFPRAARIGSLAGV*VAPLSQ
Trigger: CTGGGACAGAGGGGCAACTCACACTCCGGCCAGACT...CCCAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTGGCCTGGGCCCAGCATaGTCCTGCTCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LIPSLGSSGKLLGRGPGLGLGPA*SCSALH
Trigger: GTGAAGAGCAGAGCAGGATCATGCTGGGCCCAGGCC...AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp TGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGAGGTATTTCAAGATaGGGGCCAGATCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CQASAGYPSAGSQEAEAGGGISR*GPDQAL
Trigger: CAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCC...ACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACGCCGGAACTCCCGCTTaGGCACCCGTGCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: WTSSMRTTTALRSMSGVDAGTPA*APVPHP
Trigger: CGGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGC...GTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTGCCGGAACTCCCGCTTaGGCACCCGTGCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTAGTPA*APVPHP
Trigger: CGGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGC...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACCCACGTGGGGACTGCTaGTGGTGGGGCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHPRGDC*WWGSFV
Trigger: CACAAAGGAGCCCCACCAGCAGCAGTCCCCACGTGG...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGRHVEH*LSKVEG
Trigger: CCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCT...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTCAGGTATGTCCCCTGTaGAACCGCCCCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGQVCPL*NRPLAG
Trigger: TCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGGCTGCAGTGACCGTCTaGTTGTTCTGTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEAAVTV*LFCALF
Trigger: AAACAAAGCACAGAACAAGCAGACGGTCACTGCAGC...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGAGTCTCCTCCCCAGGTaGTCTTGGCAAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWSLLPR*SWQSPV
Trigger: GACTGGGCTTTGCCAAGAGCACCTGGGGAGGAGACT...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGAGACCTTGCACCAGCTaGAGCCAAAGAGTGGACTTA +
Preference number: 4 (lower is better)
Translates to: DEGQVCPLCNRPLAGSEQRPCTS*SQRVDL
Trigger: TAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCT...CTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGGATCCGGGATCTCGATaGTGTAGTCCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLDPGSR*CSPALP
Trigger: CGGCAGAGCTGGACTACACCATCGAGATCCCGGATC...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCCTGTGCTGCCCAGTCTaGCCGGAGTGTGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTLCCPV*PECELP
Trigger: GGGCAACTCACACTCCGGCCAGACTGGGCAGCACAG...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTATCCGTTCCACCACGTaGGGACTGCTGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTIRSTT*GLLLVG
Trigger: CCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGAT...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCAGGTGGGGATGGCCTaGGCCCAGCATGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTQVGMA*AQHDPA
Trigger: AGCAGGATCATGCTGGGCCCAGGCCATCCCCACCTG...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGTGTGCAACCGCCCCCTaGCAGGATCGGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWCATAP*QDRSRR
Trigger: TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACA...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGTGGCTCCAGCAGGGCTaGTCCGGGATCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PDRLQVVGRCQAFISGAEWLQQG*SGISMV
Trigger: CACCATCGAGATCCCGGATCAGCCCTGCTGGAGCCA...CTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGCTCTCAGCTTCGGGTaGTGCATTGAAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWALSFG*CIEGDS
Trigger: GCTGTCACCTTCAATGCATCACCCGAAGCTGAGAGC...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCACGAGGTACAAGCAGCTaGCACGTAGACATTGGCACT +
Preference number: 4 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPRGTSS*HVDIGT
Trigger: AGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCG...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCACTGGCTGGCCTGGGCCCAGCATaGTCCTGCTCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VWVDLAPAAAKEWTYSLAGLGPA*SCSALH
Trigger: GTGAAGAGCAGAGCAGGATCATGCTGGGCCCAGGCC...AGCCAGTGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCAGAGGCCCAGGTCTTTaGCCTCTAAATTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGRGPGL*PLNWFA
Trigger: AGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCT...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CATAGGAATTTTCTACTTAGGGGACCGCAAAGTCCCAAAGGGCTACAGGGAGTTGCCGGAACTCCCGCTTaGGCACCCGTGCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: HRNFLLRGPQSPKGLQGVAGTPA*APVPHP
Trigger: CGGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGC...AACTCCCTGTAGCCCTTTGGGACTTTGCGGTCCCCTAAGTAGAAAATTCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp AGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATCTGGTGCCAGGCCTCTaGTGGGTATCCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SMILLCSSQREGSCMAEDLVPGL*WVSICW
Trigger: CCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG...ATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCCTGGTGCCAGGCCTCTaGTGGGTATCCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTLVPGL*WVSICW
Trigger: CCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGTTCCCTTCTGACCACTaGTCTCTCCTTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GWWLVIHPFHHVGTAAGGFPSDH*SLLLLS
Trigger: TGAAAGCAAAAGGAGAGAGCAGTGGTCAGAAGGGAA...CCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCCGTCTGCTTGTTCTGTaGTTTGTTTTCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGRLLVL*FVFGFP
Trigger: GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACG...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGAGGCTGCCGAGTTTCTaGCTCCTTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLQRKTIGKRPRSLRLPSF*LLPTWA
Trigger: AGCCCAGGTGGGAAGGAGGCAGAAACTCGGCAGCCT...CAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR GCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCAGAATCACCACAGGCTaGCGAGTTTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCRITTG*RVSASF
Trigger: GAAGGAGGCAGAAACTCGGCAGCCTGTGGTGATTCT...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCACGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGARCQRW*PPHAGG
Trigger: GCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCG...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp ACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TCPNTTDCKAPTDTCPGTRCQRW*PPHAGG
Trigger: GCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCG...AGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCACCGGCGTGCCAGGCGTaGCTCCACCATGCGTTCTAT +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGAPACQA*LHHAFY
Trigger: ATAGAACGCATGGTGGAGGCACGCCTGGCACGCCGG...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp GGGGTCAGAGGAGCCTCTCTGAGTGAACTGCCAAGTGGGAGCCATGTGAATGGTGAGTGCCCGACAGATTaGAGGTTGTGGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GVRGASLSELPSGSHVNGECPTD*RLWGGV
Trigger: GACACCTCCCCACAACCTGCAATCTGTCGGGCACTC...ACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGAGGCTCCTCTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp TATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCATCTCCCCCTCTACAGCCTGCATaGCACAGGAATCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YPQPDATPDRYTFPLASPPLQPA*HRNQQP
Trigger: AGGCTGCTGATTCCTGTGGCATGCAGGCTGTAGAGG...GGGAGATGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp TGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCTGTGGTGGGTATCCATCTGCTaGAAGCCAAGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CSALHRGKAPAWLRMMLWWVSIC*KPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCA...CCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCTGTGGGTGCCAGGCCTCTGCTaGGTATCCATCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CSALHRGKAPAWLRMMLWVPGLC*VSICWK
Trigger: CTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCAC...CCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCCCCTGAATCTGTaGGCTCTTGGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LPRYKQLTRRHWHSGARPLPLNL*ALGVSM
Trigger: CATGGAGACCCCAAGAGCCCACAGATTCAGGGGCAG...AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGACCTTCCCACCTGGGCTaGGGCTGTTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRPSHLG*GCSSGS
Trigger: GGAGCCAGAAGAACAGCCCCAGCCCAGGTGGGAAGG...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGTGCCTCCTTCCCACCTaGGCTGGGGCTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWCLLPT*AGAVLL
Trigger: CAGAAGAACAGCCCCAGCCCAGGTGGGAAGGAGGCA...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CCA 90 bp AGGGCTTCGCCCTGCTGGAGCAAAGATCATAGCCCCTATCCGCAGCCTGACGCTCTGGTCTTTAGGGCTTaGGAGTTAGCTCATCCCAGC +
Preference number: 4 (lower is better)
Translates to: RASPCWSKDHSPYPQPDALVFRA*ELAHPS
Trigger: GCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAG...AGCGTCAGGCTGCGGATAGGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp ATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGGTGGGGCTCCTTTGTaGCCGTGCTGCCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: MAEDDAVDIEHENNNRFEGGAPL*PCCLPV
Trigger: CACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACC...CTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp TCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACGGCCTGGGCCCAGCATaGTCCTGCTCTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SKLVCFKGALELRAHLAHGLGPA*SCSALH
Trigger: GTGAAGAGCAGAGCAGGATCATGCTGGGCCCAGGCC...GTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AAAGGCCAATGGCTGGCAAGAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGATCGGAGCAGGAGATaGGTAGGCATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: KGQWLARGQDVSAPLGPWDRSRR*VGMWSI
Trigger: AATGCTCCACATGCCTACTCATCTCCTGCTCCGATC...CCAGGGTCCCAGTGGAGCTGACACATCCTGACCTCTTGCCAGCCATTGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCACATTGGCACTCTGGTaGCAGGCCTCTGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KQLTRRHWHSGARPLLGITLALW*QASAGY
Trigger: ATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGT...GATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCGAGCTGTGCCTTCGTTaGAGACTGTGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTELCLR*RLWGAG
Trigger: ACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTC...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACGAGCTGTGCCTTCGTTaGAGACTGTGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHELCLR*RLWGAG
Trigger: ACCTGCTCCCCACAGTCTGCAACGAAGGCACAGCTC...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTTCCCTTCTGACCACTaGTCTCTCCTTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGFPSDH*SLLLLS
Trigger: TGAAAGCAAAAGGAGAGAGCAGTGGTCAGAAGGGAA...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAAGGCTGCCGAGTTTCTaGCTCCTTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGARLPSF*LLPTWA
Trigger: AGCCCAGGTGGGAAGGAGGCAGAAACTCGGCAGCCT...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp ATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCAGGCTGCCGAGTTTCTaGCTCCTTCCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MSRHVEHCLSKVEGPSPPRLPSF*LLPTWA
Trigger: AGCCCAGGTGGGAAGGAGGCAGAAACTCGGCAGCCT...GGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR GCA 90 bp CTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTTGCAGAAGACCAGGTTaGTGTCACCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LPRYKQLTRRHWHSGARPCRRPG*CHQERC
Trigger: ACAGCGCTCCTGGTGACAGCAACCTGGTCTTCTGCA...AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR GCA 90 bp AGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCGAGCCCCTACCAGGTTaGTGTCACCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SARQIAGCGEVSGIYFWSEPLPG*CHQERC
Trigger: ACAGCGCTCCTGGTGACAGCAACCTGGTAGGGGCTC...GCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp ACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTGAGCCCCTACCAGGTTaGTGTCACCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: TCPNTTDCKAPTDTCPGTEPLPG*CHQERC
Trigger: ACAGCGCTCCTGGTGACAGCAACCTGGTAGGGGCTC...AGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGAGGCCGAGGCTGGTaGCTGGTCATCCATCCGTTC +
Preference number: 4 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPRGRGW*LVIHPF
Trigger: GAACGGATGGATGACCAGCCACCAGCCTCGGCCTCT...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTTGGGTATCCATCTGCTaGAAGCCAAGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGWVSIC*KPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCA...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTCTGAGGATGATGCTGTaGACATCGAGCATGAGAACA +
Preference number: 4 (lower is better)
Translates to: CQASAGYPSAGSQEAEAGLRMML*TSSMRT
Trigger: TGTTCTCATGCTCGATGTCCACAGCATCATCCTCAG...ACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCACCAGCGGAAAACTATTaGGAAGAGGCCCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPPAENY*EEAQVF
Trigger: AAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGG...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTTGGGGTCTCCATGTaGTCTCAGCAGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPRYKQLTRRHWHSGARPLGVSM*SQQLLP
Trigger: GGGAAGAAGCTGCTGAGACCACATGGAGACCCCAAG...AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGCTGCCCCTGAATCTGTaGGCTCTTGGGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWLPLNL*ALGVSM
Trigger: CATGGAGACCCCAAGAGCCCACAGATTCAGGGGCAG...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TTCACTCTCACTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGTGTGCAACCGCCCCCTaGCAGGATCGGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FTLTHSLLGLQRKTIGKRCATAP*QDRSRR
Trigger: TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACA...CCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTGAGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGATGTGTCAGCTCCACTaGGACCCTGGGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRMCQLH*DPGGCS
Trigger: ACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACAT...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCATGCCTCCTTCCCACCTaGGCTGGGGCTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGACLLPT*AGAVLL
Trigger: CAGAAGAACAGCCCCAGCCCAGGTGGGAAGGAGGCA...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp ACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTTGCCTCCTTCCCACCTaGGCTGGGGCTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TCPNTTDCKAPTDTCPGTCLLPT*AGAVLL
Trigger: CAGAAGAACAGCCCCAGCCCAGGTGGGAAGGAGGCA...AGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGAERCQR*CPPHAG
Trigger: GCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTC...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp CCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGGAGCAAGCAGGACGTaGAACAGGACGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: PDRLQVVGRCQAFISGAEGASRT*NRTTTR
Trigger: CCTGGTGGTCGTCCTGTTCCACGTCCTGCTTGCTCC...CTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGAGCAAGCAGGACGTaGAACAGGACGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRGASRT*NRTTTR
Trigger: CCTGGTGGTCGTCCTGTTCCACGTCCTGCTTGCTCC...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp CCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGGGTGAGATGGAGCAATaGCCTCAGCAGCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PTDCRLWGGVRHLFLEQRGEMEQ*PQQRTQ
Trigger: CTGCGTCCGCTGCTGAGGCCATTGCTCCATCTCACC...CCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp ACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTGGTGAGATGGAGCAATaGCCTCAGCAGCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: TCPNTTDCKAPTDTCPGTGEMEQ*PQQRTQ
Trigger: CTGCGTCCGCTGCTGAGGCCATTGCTCCATCTCACC...AGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCGACACTAGCTGCTaGCTGCCCCTGAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPPDTSC*LPLNLW
Trigger: CCACAGATTCAGGGGCAGTCAGCAGCTAGTGTCGGG...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATACGGAGGAAGCAAGATaGAGGGCAGGTATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SMILLCSSQREGSCMAEDTEEAR*RAGMSP
Trigger: AGGGGACATACCTGCCCTTCATCTTGCTTCCTCCGT...ATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCACCACGGAGGAAGCAAGATaGAGGGCAGGTATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SRHVEHCLSKVEGPSPPTTEEAR*RAGMSP
Trigger: AGGGGACATACCTGCCCTTCATCTTGCTTCCTCCGT...GGTGGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGTGTGGAAGAGGGCTGTaGTGGGAGCAAGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: PDRLQVVGRCQAFISGAECGRGL*WEQAGR
Trigger: ACGTCCTGCTTGCTCCCATCACAGCCCTCTTCCACA...CTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp AACCTCTACAGCCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCTGTGGAAGAGGGCTGTaGTGGGAGCAAGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: NLYSLHATGISSLTVALVCGRGL*WEQAGR
Trigger: ACGTCCTGCTTGCTCCCATCACAGCCCTCTTCCACA...GACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGGCTGTAGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp GTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGGCTGACGTGTGCAGATaGCACGAAATCCACAGAACG +
Preference number: 4 (lower is better)
Translates to: VQTQLTARLPQTHAQALLADVCR*HEIHRT
Trigger: CGTTCTGTGGATTTCGTGTCATCTGCACACGTCAGC...CAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAAGTCACGGAGGTGGCTaGCGTGTGCAGATGACACGA +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRSHGGG*RVQMTR
Trigger: TCGTGTCATCTGCACACGTCAGCCACCTCCGTGACT...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp TGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGGGACGCAGTTGCGCATaGAGTCGACACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CPTDCRLWGGVRHLFLEQGRSCA*SRHRGL
Trigger: CAAGCCTCTGTGTCGACTTCATGCGCAACTGCGTCC...CTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp AATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGGAGTTAGCTCATCCCAGCGGACGCAGTTGCGCATaGAGTCGACACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NPLTLVLVFRAWELAHPSGRSCA*SRHRGL
Trigger: CAAGCCTCTGTGTCGACTTCATGCGCAACTGCGTCC...GCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp CTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGCCCCTTAGGATTTTGTCCAAACACAACTaGCTGCAAGGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LTARLPQTHAQALLPLRILSKHN*LQGSHR
Trigger: TCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAA...AATCCTAAGGGGCAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGCTGCAGTGAGCCATaGTTGCACCATTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRGCSEP*LHHCTP
Trigger: TGGGGTGCAATGGTGCAATCATGGCTCACTGCAGCC...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGGCCGGAGTGTGAGTTaGCCCTCTGTCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRSLTSKLVCFKGALELRGRSVS*PSVPAE
Trigger: CTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCC...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGTGCTGGGTATCCATCTaGTGGAAGCCAAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWCWVSI*WKPRGR
Trigger: TCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCA...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGACATTGGCACTCTGGTaGCAGGCCTCTGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWTLALW*QASAGY
Trigger: ATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGT...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACCAGAGGGAAGGCTCCTaGATGGCTGAGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHQREGS*MAEDDA
Trigger: AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTG...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGCAGGTATGTCCCCTGTaGAACCGCCCCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPRSLTSKLVCFKGALELQVCPL*NRPLAG
Trigger: TCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTG...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCAGCTGCAGTGACCGTCTaGTTGTTCTGTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPAAVTV*LFCALF
Trigger: AAACAAAGCACAGAACAAGCAGACGGTCACTGCAGC...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGGTATGGGTAGACCTTaGACCAGCTGCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPGMGRP*TSCSQR
Trigger: TCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACC...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTGGTATGGGTAGACCTTaGACCAGCTGCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPRYKQLTRRHWHSGARPGMGRP*TSCSQR
Trigger: TCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACC...AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGGCGTGCCTCCACCATaGGTTCTATGTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGAGVPPP*VLCLWP
Trigger: TGGCCAGAGACATAGAACGCATGGTGGAGGCACGCC...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp AGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCGGCGTGCCTCCACCATaGGTTCTATGTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SARQIAGCGEVSGIYFWSGVPPP*VLCLWP
Trigger: TGGCCAGAGACATAGAACGCATGGTGGAGGCACGCC...GCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp TGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGCAGCTCCTGTTACAATaGTGCTGCCTTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: CPTDCRLWGGVRHLFLEQQLLLQ*CCLPAP
Trigger: GGGGGCAGGAAGGCAGCAGCATTGTAACAGGAGCTG...CTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp CCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGGATCCGGGATCTCGATaGTGTAGTCCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PTDCRLWGGVRHLFLEQRDPGSR*CSPALP
Trigger: CGGCAGAGCTGGACTACACCATCGAGATCCCGGATC...CCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTCTGTGCTGCCCAGTCTaGCCGGAGTGTGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTLCCPV*PECELP
Trigger: GGGCAACTCACACTCCGGCCAGACTGGGCAGCACAG...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGCGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: LWTSSMRTTTALRSMSGVRGDCC*WGSFVT
Trigger: GGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACG...CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGGGCCACCACTCTCCTaGAAGGTGGCTTCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMGPPLS*KVASEV
Trigger: TACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCCC...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACTGTGCAACCGCCCCCTaGCAGGATCGGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WTSSMRTTTALRSMSGVDCATAP*QDRSRR
Trigger: TCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACA...GTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp ATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGCCTTCCCACCTGGGCTaGGGCTGTTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: MAEDDAVDIEHENNNRFEPSHLG*GCSSGS
Trigger: GGAGCCAGAAGAACAGCCCCAGCCCAGGTGGGAAGG...CTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CCA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCACCCTTTTGTGGTAGATaGCACTGTACTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPPFCGR*HCTWQG
Trigger: ACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGG...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CCA 90 bp TATCCGCAGCCTGACGCTACCCCTGACCGATATACCTTCCCTCTGGCATCTCCCAGCTCGAGCAGCTTCTaGGCCAAAACACGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: YPQPDATPDRYTFPLASPSSSSF*AKTRSE
Trigger: TTCACTTCGTGTTTTGGCCCAGAAGCTGCTCGAGCT...GGGAGATGCCAGAGGGAAGGTATATCGGTCAGGGGTAGCGTCAGGCTGCGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACCCGTTGCTGAAGACATaGAAGAGCAGGGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHPLLKT*KSRGSF
Trigger: GAAGGAGCCCCTGCTCTTCCATGTCTTCAGCAACGG...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR CCA 90 bp CGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQIAGCGEVSGIYFWSRGERCQR*CPPHAG
Trigger: GCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTC...ACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGAGCAGAGGTGAGATaGAGCAATGGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRGAEVR*SNGLSS
Trigger: GCTGCTGAGGCCATTGCTCCATCTCACCTCTGCTCC...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGACAGACTCCCAGGCAATaGGGTCAGAGGAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ARQIAGCGEVSGIYFWSRQTPRQ*GQRSLS
Trigger: AGAGAGGCTCCTCTGACCCCATTGCCTGGGAGTCTG...TCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCGCTCTCAGCTTCGGGTaGTGCATTGAAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPALSFG*CIEGDS
Trigger: GCTGTCACCTTCAATGCATCACCCGAAGCTGAGAGC...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGGGGAAATGGAATTGTaGGGCTGCAAGCTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGGEMEL*GCKLGV
Trigger: CACTCCTAGCTTGCAGCCTCACAATTCCATTTCCCC...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGTGCTCTTGGGGGGAAATGGAATTGTaGGGCTGCAAGCTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VDLLTGLVSTSLLPRCSWGEMEL*GCKLGV
Trigger: CACTCCTAGCTTGCAGCCTCACAATTCCATTTCCCC...CCAAGAGCACCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCGAGGTACAAGCAGCTaGCACGTAGACATTGGCACT +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTRGTSS*HVDIGT
Trigger: AGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCG...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGATGTAGCTGCTGACTGCCCCTaGATCTGTGGGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSFVTVLPACDVHIKMDVAADCP*ICGLLG
Trigger: CCCCAAGAGCCCACAGATTCAGGGGCAGTCAGCAGC...TACATCCATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTGATCGGAGCAGGAGATaGGTAGGCATGTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTDRSRR*VGMWSI
Trigger: AATGCTCCACATGCCTACTCATCTCCTGCTCCGATC...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGACGGAGGAAGCAAGATaGAGGGCAGGTATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRTEEAR*RAGMSP
Trigger: AGGGGACATACCTGCCCTTCATCTTGCTTCCTCCGT...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAAGTCACGGAGGTGGCTaGCGTGTGCAGATGACACGA +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGSHGGG*RVQMTR
Trigger: TCGTGTCATCTGCACACGTCAGCCACCTCCGTGACT...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp CCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCCAAACACAACTAGGGCTACAGGGAGTTaGACGAGAAGAGTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: PACHRNQQPDCCTCPNTTRATGS*TRRVPD
Trigger: GTCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCT...AGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp TTCAGCCCAAATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGGAGTTAGCTAGGAGCCTCTCTGAGTaGACTGCCAAGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FSPNPLTLVLVFRAWELARSLSE*TAKWEP
Trigger: TGGCTCCCACTTGGCAGTTCACTCAGAGAGGCTCCT...AGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATTTGGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTSMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSLLGLQRKTIGKRPRSLSMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...CAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTAGCATGATCCTGCTCTaGTCTTCACAGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGSMILL*SSQREG
Trigger: GCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGCGTCTGCTTGTTCTGTaGTTTGTTTTCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLRLLVL*FVFGFP
Trigger: GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACG...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACAGTCTCCTCCCCAGGTaGTCTTGGCAAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SKLVCFKGALELRAHLAHSLLPR*SWQSPV
Trigger: GACTGGGCTTTGCCAAGAGCACCTGGGGAGGAGACT...GTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGAAGAAGACCATGTaGCACGGGGCTGTGTATCGG +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGAEKKTM*HGAVYR
Trigger: CCGATACACAGCCCCGTGGCACATGGTCTTCTTCTC...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp CGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGAGTGCCCGACAGATTaGAGGTTGTGGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RQIAGCGEVSGIYFWSRGECPTD*RLWGGV
Trigger: GACACCTCCCCACAACCTGCAATCTGTCGGGCACTC...ACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp CTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGCCCCTTAGGATTCAGCAGCCTGACTGTTaGACTTGTCCAAACACAACT +
Preference number: 4 (lower is better)
Translates to: LTARLPQTHAQALLPLRIQQPDC*TCPNTT
Trigger: AGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTG...AATCCTAAGGGGCAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGGATCCGGGATCTCGATaGTGTAGTCCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: DRLQVVGRCQAFISGAEVDPGSR*CSPALP
Trigger: CGGCAGAGCTGGACTACACCATCGAGATCCCGGATC...CACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGATCCGGGATCTCGATaGTGTAGTCCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMDPGSR*CSPALP
Trigger: CGGCAGAGCTGGACTACACCATCGAGATCCCGGATC...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCAGTGCCAGGCCTCTGCTaGGTATCCATCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPVPGLC*VSICWK
Trigger: CTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCAC...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCCAGCGGAAAACTATTaGGAAGAGGCCCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KQLTRRHWHSGARPLLGIPAENY*EEAQVF
Trigger: AAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGG...GATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCACTCATTCCCTCCTTaGGCTCCAGCGGAAAACTAT +
Preference number: 4 (lower is better)
Translates to: LPRYKQLTRRHWHSGARPHSFPP*APAENY
Trigger: ATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTG...AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTTGGAATCTGTGGGCTCTTaGGGTCTCCATGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HSLLGLQRKTIGKRPRSLESVGS*GLHVVS
Trigger: TGAGACCACATGGAGACCCCAAGAGCCCACAGATTC...CAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGATGTGTCAGCTCCACTaGGACCCTGGGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPRSLTSKLVCFKGALELMCQLH*DPGGCS
Trigger: ACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACAT...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCGCAAATAGAAAGGTATaGGTAGACCTTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCANRKV*VDLAPA
Trigger: AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCCCGTTGCTGAAGACATaGAAGAGCAGGGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SARQIAGCGEVSGIYFWSPLLKT*KSRGSF
Trigger: GAAGGAGCCCCTGCTCTTCCATGTCTTCAGCAACGG...GCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp CGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGGAGCAGAGGTGAGATaGAGCAATGGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQIAGCGEVSGIYFWSRGGAEVR*SNGLSS
Trigger: GCTGCTGAGGCCATTGCTCCATCTCACCTCTGCTCC...ACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp AATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGGAGTTAGCTCATCCCAGCCCTCAGCTCCTCATCTaGCTTCTACCTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: NPLTLVLVFRAWELAHPSPQLLI*LLPQTP
Trigger: GGGAGTCTGAGGTAGAAGCCAGATGAGGAGCTGAGG...GCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR CAA 72 bp TTAGGGGACCGCAAAGTCCCAAAGGGCTACAGGGAGTaGAACGAGAAGAGTGCCCGACAGATTGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGDRKVPKGYRE*NEKSARQIAGC
Trigger: ACAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCTTTGGGACTTTGCGGTCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCGGGGAAATGGAATTGTaGGGCTGCAAGCTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPGEMEL*GCKLGV
Trigger: CACTCCTAGCTTGCAGCCTCACAATTCCATTTCCCC...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGGGAGGTATTTCAAGATaGGGGCCAGATCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRGGISR*GPDQAL
Trigger: CAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCC...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGGCTGACGTGTGCAGATaGCACGAAATCCACAGAACG +
Preference number: 4 (lower is better)
Translates to: PTDCRLWGGVRHLFLEQRADVCR*HEIHRT
Trigger: CGTTCTGTGGATTTCGTGTCATCTGCACACGTCAGC...CCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp ACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTAGGTTGAGGCTGCAGTaGGCCATGATTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: TCPNTTDCKAPTDTCPGTRLRLQ*AMIAPL
Trigger: CAATGGTGCAATCATGGCTCACTGCAGCCTCAACCT...AGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp CTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGCCCCTTAGGATTACTGAACTATCAGGCTaGATTCACCTCTTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: LTARLPQTHAQALLPLRITELSG*IHLFCL
Trigger: TAGGCAGAAGAGGTGAATTCAGCCTGATAGTTCAGT...AATCCTAAGGGGCAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp CTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGCTGGGGCTAGAGCTGTaGCTTCGTTGCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LWTSSMRTTTALRSMSGVLGLEL*LRCRLW
Trigger: CCACAGTCTGCAACGAAGGCACAGCTCTAGCCCCAG...CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCTSKLV*FKGALE
Trigger: CTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGT...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTAGGCATGTGGAGCATTaGCTTTCTAAGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NRFEEYEWCGQKRIRATTRHVEH*LSKVEG
Trigger: CCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCT...AGTGGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGATGTATGGGACCCTGGGGGCTaGAGTGACCGTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GSFVTVLPACDVHIKMDVWDPGG*SDRLLV
Trigger: AACAAGCAGACGGTCACTGCAGCCCCCAGGGTCCCA...TACATCCATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACAGTCTCCTCCCCAGGTaGTCTTGGCAAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WTSSMRTTTALRSMSGVDSLLPR*SWQSPV
Trigger: GACTGGGCTTTGCCAAGAGCACCTGGGGAGGAGACT...GTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CCCAGTCCCCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTAGACCTTGCACCAGCTaGAGCCAAAGAGTGGACTTA +
Preference number: 4 (lower is better)
Translates to: PSPQRSRRYFKMRARSGTRPCTS*SQRVDL
Trigger: TAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCT...AGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGGGGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACAGACCTTGCACCAGCTaGAGCCAAAGAGTGGACTTA +
Preference number: 4 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHRPCTS*SQRVDL
Trigger: TAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCT...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTTACTCACTGGCTGGTATGGGTAGACCTTaGACCAGCTGCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VWVDLAPAAAKEWTYSLAGMGRP*TSCSQR
Trigger: TCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACC...AGCCAGTGAGTAAGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAAGAATCACCACAGGCTaGCGAGTTTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGARITTG*RVSASF
Trigger: GAAGGAGGCAGAAACTCGGCAGCCTGTGGTGATTCT...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGAGAAGAAGACCATGTaGCACGGGGCTGTGTATCGG +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMEKKTM*HGAVYR
Trigger: CCGATACACAGCCCCGTGGCACATGGTCTTCTTCTC...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR GCA 90 bp GAAGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGATGCCCAGGCACTCCTaGCCCTTAGGATTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EECPTDCRLWGGVRHLFLMPRHS*PLGFCG
Trigger: ACCACAGAATCCTAAGGGGCAGGAGTGCCTGGGCAT...CAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp AGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCTGTAGGGCTTCGCCCTaGTGGAGCAAAGATCATAGC +
Preference number: 4 (lower is better)
Translates to: SARQIAGCGEVSGIYFWSCRASP*WSKDHS
Trigger: GCTATGATCTTTGCTCCAGCAGGGCGAAGCCCTACA...GCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTGATCCGGGATCTCGATaGTGTAGTCCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTDPGSR*CSPALP
Trigger: CGGCAGAGCTGGACTACACCATCGAGATCCCGGATC...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGGGTATCCATCTGCTaGAAGCCAAGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: DAVDIEHENNNRFEEYEWWVSIC*KPRGRG
Trigger: GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCA...CCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KQLTRRHWHSGARPLLGIRWHCT*QGSCPC
Trigger: GCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCT...GATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR TCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACGAGGTACAAGCAGCTaGCACGTAGACATTGGCACT +
Preference number: 4 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPRGTSS*HVDIGT
Trigger: AGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCG...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTCTCGGATTGGGAAAATaGAACGGAGGAAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGLGLGK*NGGSKM
Trigger: CATCTTGCTTCCTCCGTTTCATTTTCCCAATCCGAG...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGGAGGTATTTCAAGATaGGGGCCAGATCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMGGISR*GPDQAL
Trigger: CAGTGCCTGATCTGGCCCTCATCTTGAAATACCTCC...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp AAGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGTTTCTGGAGCAGAGGTaGGATGGAGCAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSARQIAGCGEVSGIYFWFLEQR*DGAMAS
Trigger: TGAGGCCATTGCTCCATCTCACCTCTGCTCCAGAAA...CCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp AGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCCAGGAATCAGCAGCCTaGCTGTTGCACTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SARQIAGCGEVSGIYFWSQESAA*LLHLSK
Trigger: TTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTG...GCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp CCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGTACAATTTTGTTAGGTaGTCTTGGCCAGGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: PDRLQVVGRCQAFISGAEYNFVR*SWPGAV
Trigger: CACCGCGCCTGGCCAAGATCACCTAACAAAATTGTA...CTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp TGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCTGTGGTTCCCTTCTGACCACTaGTCTCTCCTTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CSALHRGKAPAWLRMMLWFPSDH*SLLLLS
Trigger: TGAAAGCAAAAGGAGAGAGCAGTGGTCAGAAGGGAA...CCACAGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAAGAATCACCACAGGCTaGCGAGTTTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGRITTG*RVSASF
Trigger: GAAGGAGGCAGAAACTCGGCAGCCTGTGGTGATTCT...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR GCA 90 bp TTCACTCTCACTCATTCCCTCCTTGGGCTCCAGCGGAAAACTATTGGGAAGAGGAGAATCACCACAGGCTaGCGAGTTTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTLTHSLLGLQRKTIGKRRITTG*RVSASF
Trigger: GAAGGAGGCAGAAACTCGGCAGCCTGTGGTGATTCT...CCTCTTCCCAATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTGAGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR GCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAACGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKRCQRW*PPHAGG
Trigger: GCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCG...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR GCA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGTTGAACGAGAAGAGTaGCCGACAGATTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: VPDRLQVVGRCQAFISGAVEREE*PTDCRL
Trigger: CAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAAC...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAACGTGGGGACTGCTGCTaGTGGGGCTCCTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKRGDCC*WGSFVT
Trigger: GGTCACAAAGGAGCCCCACCAGCAGCAGTCCCCACG...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGCTGACACGTAGACATTaGCACTCTGGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSLTSKLVCFKGALELRLTRRH*HSGARP
Trigger: AGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAG...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAG +
Preference number: 4 (lower is better)
Translates to: WTSSMRTTTALRSMSGVDHSPGR*LPRYKQ
Trigger: CTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTG...GTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGCACTCTCCTGGAAGGTaGCTTCCGAGGTACAAGCAG +
Preference number: 4 (lower is better)
Translates to: LWTSSMRTTTALRSMSGVHSPGR*LPRYKQ
Trigger: CTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTG...CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGTGCGTTCTATGTCTCTaGCCAGGACTACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: PDRLQVVGRCQAFISGAECVLCL*PGLLRQ
Trigger: CTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCA...CTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp GGGTCTCCCTTCCAGAAGATGAAGGAGTTTGCTATTTCAGCCCAAATCCCCTTAAGGGCTTCGCCCTGCTaGAGCAAAGATCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSPFQKMKEFAISAQIPLRASPC*SKDHSP
Trigger: GGGGCTATGATCTTTGCTCCAGCAGGGCGAAGCCCT...TAAGGGGATTTGGGCTGAAATAGCAAACTCCTTCATCTTCTGGAAGGGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR TCA 90 bp ATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCCTCGGATTGGGAAAATaGAACGGAGGAAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: MSRHVEHCLSKVEGPSPPLGLGK*NGGSKM
Trigger: CATCTTGCTTCCTCCGTTTCATTTTCCCAATCCGAG...GGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CTGACTGTTGCACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATTTTCTGGAGCAGAGGTaGGATGGAGCAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LTVALVQTQLTARLPQTHFLEQR*DGAMAS
Trigger: TGAGGCCATTGCTCCATCTCACCTCTGCTCCAGAAA...ATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGTGCAACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCATGCCTGCCTGTGATGTaGATATTAAAATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPCLPVM*ILKWMY
Trigger: ATACATCCATTTTAATATGCACATCACAGGCAGGCA...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGGCTGCAGTGACCGTCTaGTTGTTCTGTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRAAVTV*LFCALF
Trigger: AAACAAAGCACAGAACAAGCAGACGGTCACTGCAGC...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGCCCAGGCACTCCTGGAAGATGAAGGAGTTTaGTATTTCAGCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: VQTQLTARLPQTHAQALLEDEGV*YFSPNP
Trigger: GGGATTTGGGCTGAAATAGCAAACTCCTTCATCTTC...CAGGAGTGCCTGGGCATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp CGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRKQDEGQVCPLCNRPLAMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...TGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCCAGCGGAAAACTATTaGGAAGAGGCCCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SKLVCFKGALELRAHLAHPAENY*EEAQVF
Trigger: AAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGG...GTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAAGAGTGGACTGAATCTGTGGGCTCTTaGGGTCTCCATGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ANRKVWVDLAPAAAKEWTESVGS*GLHVVS
Trigger: TGAGACCACATGGAGACCCCAAGAGCCCACAGATTC...AGTCCACTCTTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp CCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PTDCRLWGGVRHLFLEQRRWHCT*QGSCPC
Trigger: GCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCT...CCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGCCCTTTTGTGGTAGATaGCACTGTACTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRPFCGR*HCTWQG
Trigger: ACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGG...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CCA 90 bp GGGTCTCCCTTCCAGAAGATGAAGGAGTTTGCTATTTCAGCCCAAATCCCCTTACCGTTGCTGAAGACATaGAAGAGCAGGGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSPFQKMKEFAISAQIPLPLLKT*KSRGSF
Trigger: GAAGGAGCCCCTGCTCTTCCATGTCTTCAGCAACGG...TAAGGGGATTTGGGCTGAAATAGCAAACTCCTTCATCTTCTGGAAGGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGATGCGTTCTATGTCTCTaGCCAGGACTACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGCVLCL*PGLLRQ
Trigger: CTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCA...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR TCA 90 bp GAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCAAGAGGCCCAGGTCTTTaGCCTCTAAATTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: EMSRHVEHCLSKVEGPSPRGPGL*PLNWFA
Trigger: AGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCT...TGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PSACSVLCFRFPRAARIGTSKLV*FKGALE
Trigger: CTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGT...CCCAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CTGACTGTTGCACTTGTCCAAACACAACTGACTGCAAGGCTCCCACAGACACATGTTGAACGAGAAGAGTaGCCGACAGATTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LTVALVQTQLTARLPQTHVEREE*PTDCRL
Trigger: CAACCTGCAATCTGTCGGGCACTCTTCTCGTTCAAC...ATGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGGACAAGTGCAACAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp CTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGCACTCATTCCCTCCTTaGGCTCCAGCGGAAAACTAT +
Preference number: 4 (lower is better)
Translates to: LWTSSMRTTTALRSMSGVHSFPP*APAENY
Trigger: ATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTG...CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGCACTCATTCCCTCCTTaGGCTCCAGCGGAAAACTAT +
Preference number: 4 (lower is better)
Translates to: RPRSLTSKLVCFKGALELHSFPP*APAENY
Trigger: ATAGTTTTCCGCTGGAGCCCAAGGAGGGAATGAGTG...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCAGGGCAAATAGAAAGGTATaGGTAGACCTTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SQRVDLLTGLVSTSLLPRANRKV*VDLAPA
Trigger: AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC...CCTGGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGRWHCT*QGSCPC
Trigger: GCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCT...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMRWHCT*QGSCPC
Trigger: GCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCT...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CCA 90 bp CGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTCCCTTTTGTGGTAGATaGCACTGTACTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RQIAGCGEVSGIYFWSRGPFCGR*HCTWQG
Trigger: ACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGG...ACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGCTCGAGCAGCTTCTaGGCCAAAACACGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RPRSLTSKLVCFKGALELSSSSF*AKTRSE
Trigger: TTCACTTCGTGTTTTGGCCCAGAAGCTGCTCGAGCT...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR CCA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAACAGATTGCAGGTTGTaGGGAGGTGTCAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGTDCRL*GGVRHL
Trigger: TAAATGCCTGACACCTCCCCACAACCTGCAATCTGT...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CCA 90 bp CCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCCAAACACAACTACAGATTGCAGGTTGTaGGGAGGTGTCAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: PACHRNQQPDCCTCPNTTTDCRL*GGVRHL
Trigger: TAAATGCCTGACACCTCCCCACAACCTGCAATCTGT...AGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp TCTCTGAGTGAACTGCCAAGTGGGAGCCATGTGAATGGTACTTTACACTGTAGGCCCTTACCCTGGTTCTaGTCTTTAGGGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLSELPSGSHVNGTLHCRPLPWF*SLGLGS
Trigger: ACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGG...CCTACAGTGTAAAGTACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
3UTR CAA 72 bp ATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTaGAGGAGTATGAGTGGTGTGGACAGAAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: MLWTSSMRTTTA*RSMSGVDRSGY
Trigger: GTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp CCTGCATGCCACAGGAATCAGCAGCCTGACTGTTGCACTTGTCCAAACACAACTCAAGTGGGAGCCATGTaGATGGTACTTTACACTGTA +
Preference number: 4 (lower is better)
Translates to: PACHRNQQPDCCTCPNTTQVGAM*MVLYTV
Trigger: TACAGTGTAAAGTACCATTCACATGGCTCCCACTTG...AGTTGTGTTTGGACAAGTGCAACAGTCAGGCTGCTGATTCCTGTGGCATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCACCTCTAAATTGGTTTaGTTCAAAGGAGCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPTSKLV*FKGALE
Trigger: CTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGT...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp ATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGCGTCTGCTTGTTCTGTaGTTTGTTTTCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: MAEDDAVDIEHENNNRFERLLVL*FVFGFP
Trigger: GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACG...CTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp CATAGGAATTTTCTACTTAGGGGACCGCAAAGTCCCAAAGGGCTACAGGGAGTTCCAAACACAACTGACTaGAAGGCTCCCACAGACACA +
Preference number: 4 (lower is better)
Translates to: HRNFLLRGPQSPKGLQGVPNTTD*KAPTDT
Trigger: TGTGTCTGTGGGAGCCTTGCAGTCAGTTGTGTTTGG...AACTCCCTGTAGCCCTTTGGGACTTTGCGGTCCCCTAAGTAGAAAATTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CCA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGATGTGCATATTAAAATaGATGTATTTGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLMCILK*MYLGGE
Trigger: TTCCCCACCCAAATACATCCATTTTAATATGCACAT...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACCTGAGGATGATGCTGTaGACATCGAGCATGAGAACA +
Preference number: 4 (lower is better)
Translates to: WTSSMRTTTALRSMSGVDLRMML*TSSMRT
Trigger: TGTTCTCATGCTCGATGTCCACAGCATCATCCTCAG...GTCCACACCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGTCCTTTTGTGGTAGATaGCACTGTACTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: DRLQVVGRCQAFISGAEVSFCGR*HCTWQG
Trigger: ACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGA...CACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372235.7
3UTR CAA 72 bp CTCCAGCGGAAAACTATTGGGAAGAGGCCCAGGTCTTaGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LQRKTIGKRPRS*TSKLVCFKGAL
Trigger: TAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp GATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGGCAAATAGAAAGGTATaGGTAGACCTTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DAVDIEHENNNRFEEYEWANRKV*VDLAPA
Trigger: AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGC...CCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CCA 90 bp TCTCTGAGTGAACTGCCAAGTGGGAGCCATGTGAATGGTACTTTACACTGTAGGCAAATCCCCTTACCCTaGTTCTGGTCTTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLSELPSGSHVNGTLHCRQIPLP*FWSLGL
Trigger: AAGCCCTAAAGACCAGAACCAGGGTAAGGGGATTTG...CCTACAGTGTAAAGTACCATTCACATGGCTCCCACTTGGCAGTTCACTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR GCA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCTGCCTGCCTGTGATGTaGATATTAAAATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPCLPVM*ILKWMY
Trigger: ATACATCCATTTTAATATGCACATCACAGGCAGGCA...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR GCA 90 bp GGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGATGTATGCCTGCCTGTGATGTaGATATTAAAATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: GSFVTVLPACDVHIKMDVCLPVM*ILKWMY
Trigger: ATACATCCATTTTAATATGCACATCACAGGCAGGCA...TACATCCATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR TCA 90 bp GGATTTTTATTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTCTCGGATTGGGAAAATaGAACGGAGGAAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GFLLNTANRKVWVDLAPALGLGK*NGGSKM
Trigger: CATCTTGCTTCCTCCGTTTCATTTTCCCAATCCGAG...AGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAATAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS GCA 90 bp CAGCAGCAACAGGCGCAGCATGGCGGCCCGGCGCTCCAGGATGGCTaGCAGGGCCCGCAGAGCCCCTACCAGGTTGCTGTCACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QQQQAQHGGPALQDG*QGPQSPYQVAVTRS
Trigger: GCTCCTGGTGACAGCAACCTGGTAGGGGCTCTGCGGGCCCTGGCAGCCATCCTGGAGCGCCGGGCCGCCATGCTGCGCCTGTTGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS TCA 90 bp GATCCGGGATCTCGATGGTGTAGTCCAGCTCTGCCGAGGCCATGGTaGAGGCGCCGGCCCAGAGCACGGGTCTCCAGCCGGAACTCCCGC +
Preference number: 5 (lower is better)
Translates to: DPGSRWCSPALPRPW*RRRPRARVSSRNSR
Trigger: GCGGGAGTTCCGGCTGGAGACCCGTGCTCTGGGCCGGCGCCTTCACCATGGCCTCGGCAGAGCTGGACTACACCATCGAGATCCCGGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
ENST00000468117.1
ENST00000476724.1
ENST00000495630.1
CDS-3UTR CAA 90 bp AACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCAGCCGGAACTCCCGCTaGCGCACCCGTGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: NRPLAGSEQEMSRHVEHCSRNSR*RTRASP
Trigger: GGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGCT...GCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS GCA 90 bp GAGCCCCTACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGCAGAAGCGACGGGTCTGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: EPLPGCCHQERCQRW*PPHAGGRSDGSAGA
Trigger: AGCTCCTGCAGACCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTAGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000420706.1
ENST00000468117.1
ENST00000476724.1
CDS GCA 90 bp CCACAGAACGCGCCAGGACCCGGCGTGCCAGGCGTGCCTCCACCATaGGTTCTATGTCTCTGGCCAGGACTACTTCGTCAGCCCTCGAGT +
Preference number: 5 (lower is better)
Translates to: PQNAPGPGVPGVPPP*VLCLWPGLLRQPSS
Trigger: ACTCGAGGGCTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCATGGTGGAGGCACGCCTGGCACGCCGGGTCCTGGCGCGTTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS CCA 90 bp GCAGAGCCCCTACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGCGGCAGAAGCGACGGGTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: AEPLPGCCHQERCQR*CPPHAGGRSDGSAG
Trigger: TCCTGCAGACCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTAGGGGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000420706.1
ENST00000468117.1
ENST00000476724.1
CDS GCA 90 bp GCAGCCACCCCAGCCCAAGAGAATCACCACAGGCTGCCGAGTTTCTaGCTCCTTCCCACCTGGGCTGGGGCTGTTCTTCTGGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: AATPAQENHHRLPSF*LLPTWAGAVLLAPA
Trigger: TGCTGGAGCCAGAAGAACAGCCCCAGCCCAGGTGGGAAGGAGGCAGAAACTCGGCAGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000372242.7
ENST00000372243.7
ENST00000420706.1
CDS CCA 90 bp GGACCCGGCGTGCCAGGCGTGCCTCCACCATGCGTTCTATGTCTCTaGCCAGGACTACTTCGTCAGCCCTCGAGTAGAGGTAGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: GPGVPGVPPPCVLCL*PGLLRQPSSRGRAR
Trigger: CCGAGCTCTACCTCTACTCGAGGGCTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCATGGTGGAGGCACGCCTGGCACGCCGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS TCA 90 bp AGCCAAGCCGCGTTAGCACCTGTGCTGCCCAGTCTGGCCGGAGTGTaGGTTGCCCCTCTGTCCCAGCAGAGATGCCATCCACCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SQAALAPVLPSLAGV*VAPLSQQRCHPPAM
Trigger: CATTGCTGGTGGATGGCATCTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCCAGACTGGGCAGCACAGGTGCTAACGCGGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS GCA 90 bp TGCAGAAGACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGCAGAAGCGACGGGTCTGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: CRRPGCCHQERCQRW*PPHAGGRSDGSAGA
Trigger: AGCTCCTGCAGACCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTCTTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS CCA 90 bp CCATGCAGAAGACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGCGGCAGAAGCGACGGGTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: PCRRPGCCHQERCQR*CPPHAGGRSDGSAG
Trigger: TCCTGCAGACCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTCTTCTGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR CAA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTAGCCGGAACTCCCGCTaGCGCACCCGTGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGSRNSR*RTRASP
Trigger: GGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGCT...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp CTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCGCTTCGGGTGATGCATaGAAGGTGACAGCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: LVPGLCWVSICWKPRGRGASGDA*KVTAKP
Trigger: CGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGC...GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGTACTTGGCAAGGTTCTaGTCCTTGCAGCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQEYLARF*SLQPPQ
Trigger: CTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTA...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS GCA 90 bp AGCCGCGTTAGCACCTGTGCTGCCCAGTCTGGCCGGAGTGTGAGTTaGCCCTCTGTCCCAGCAGAGATGCCATCCACCAGCAATGGTGAA +
Preference number: 5 (lower is better)
Translates to: SRVSTCAAQSGRSVS*PSVPAEMPSTSNGE
Trigger: TTCACCATTGCTGGTGGATGGCATCTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCCAGACTGGGCAGCACAGGTGCTAACGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp TGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGCCGGAACTCCCGCTaGCGCACCCGTGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: CPTDCRLWGGVRHLFLEQSRNSR*RTRASP
Trigger: GGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGCT...CTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CAA 90 bp TGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGCTTCGGGTGATGCATaGAAGGTGACAGCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: CQASAGYPSAGSQEAEAGASGDA*KVTAKP
Trigger: CGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGC...ACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGAGCTGAGGGCCCACTaGGCACACCACAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GRWLPRYKQLTRRHWHSGELRAH*AHHSWG
Trigger: GCCCCAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTC...ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS TCA 90 bp CCGCGTCCTGTAGCCTGTCATAGAAGTGGGTGTGGAAGAGGGCTGTaGTGGGAGCAAGCAGGACGTGGAACAGGACGACCACCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: PRPVACHRSGCGRGL*WEQAGRGTGRPPGQ
Trigger: TTGCCCTGGTGGTCGTCCTGTTCCACGTCCTGCTTGCTCCCATCACAGCCCTCTTCCACACCCACTTCTATGACAGGCTACAGGACGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS TCA 90 bp TGTGTAGTAAGTAGGGTAGTCACGGAGGTGGCTGACGTGTGCAGATaGCACGAAATCCACAGAACGCGCCAGGACCCGGCGTGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: CVVSRVVTEVADVCR*HEIHRTRQDPACQA
Trigger: CGCCTGGCACGCCGGGTCCTGGCGCGTTCTGTGGATTTCGTGTCATCTGCACACGTCAGCCACCTCCGTGACTACCCTACTTACTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS-3UTR CAA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCGAGCTGAGGGCCCACTaGGCACACCACAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPELRAH*AHHSWG
Trigger: GCCCCAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTC...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GAGGTCAGGATGTGTCAGCTCCACTGGGACCCTGGGGGCTGCAGTGACCGTCTGTCCAGCGGAAAACTATaGGGAAGAGGCCCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: EVRMCQLHWDPGGCSDRLSSGKL*GRGPGL
Trigger: AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGA...CAGACGGTCACTGCAGCCCCCAGGGTCCCAGTGGAGCTGACACATCCTGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp CCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGAGCCGGAACTCCCGCTaGCGCACCCGTGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PRSLTSKLVCFKGALELRSRNSR*RTRASP
Trigger: GGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGCT...CCTCAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGAGAACAACAACCGCTTaGAGGAGTATGAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: EGQVCPLCNRPLAGSEQERTTTA*RSMSGV
Trigger: CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCT...CTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp TGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAAATGGAGCTGAGGGCCCACTaGGCACACCACAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: WWGSFVTVLPACDVHIKMELRAH*AHHSWG
Trigger: GCCCCAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTC...CATTTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS TCA 90 bp GAGTTGCCCCTCTGTCCCAGCAGAGATGCCATCCACCAGCAATGGTaGAAGCAGCAAGCAGGAGGCCATGCAGAAGACCAGGTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: ELPLCPSRDAIHQQW*KQQAGGHAEDQVAV
Trigger: GACAGCAACCTGGTCTTCTGCATGGCCTCCTGCTTGCTGCTTTCACCATTGCTGGTGGATGGCATCTCTGCTGGGACAGAGGGGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR CAA 90 bp CCTGGGGGCTGCAGTGACCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCATGCAGAAGACCAGGTaGCTGTCACCAGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: PGGCSDRLLVLCFVFGFPMQKTR*LSPGAL
Trigger: CAGCGCTCCTGGTGACAGCAACCTGGTCTTCTGCAT...GGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGGTCACTGCAGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS-3UTR CAA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGTCCAGCGGAAAACTATaGGGAAGAGGCCCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLSSGKL*GRGPGL
Trigger: AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGA...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp CTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCAGCAGTGACCGTCTGCTaGTTCTGTGCTTTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: LGIHLLEAKRPRLVAGHPAVTVC*FCALFS
Trigger: CGAAAACAAAGCACAGAACAAGCAGACGGTCACTGC...TGGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp AATCCCCTTACCCTGGTTCTGGTCTTTAGGGCTTGGGAGTTAGCTCATCCCAGCCAGCAGCGGACGCAGTaGCGCATGAAGTCGACACAG +
Preference number: 5 (lower is better)
Translates to: NPLTLVLVFRAWELAHPSQQRTQ*RMKSTQ
Trigger: CTGTGTCGACTTCATGCGCAACTGCGTCCGCTGCTG...GCTGGGATGAGCTAACTCCCAAGCCCTAAAGACCAGAACCAGGGTAAGGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS TCA 90 bp TGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTaGGATGGAGCAATGGCCTCAGCAGCGGACGCAGTTGCGCATGAA +
Preference number: 5 (lower is better)
Translates to: CRLWGGVRHLFLEQR*DGAMASAADAVAHE
Trigger: TTCATGCGCAACTGCGTCCGCTGCTGAGGCCATTGCTCCATCTCACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS GCA 90 bp ACACGAAGTGAAGGGATACCCAGTGACTCGGAGAAGAAGACCATGTaGCACGGGGCTGTGTATCGGATTACGATGCAGCCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TRSEGIPSDSEKKTM*HGAVYRITMQPLAP
Trigger: TGGAGCCAGAGGCTGCATCGTAATCCGATACACAGCCCCGTGGCACATGGTCTTCTTCTCCGAGTCACTGGGTATCCCTTCACTTCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476724.1
CDS-3UTR CAA 90 bp GGTTTGCTTCAAAGGAGCCCTAGAGCTGAGGGCCCACTTGGCACACCACAGCTGTGCTTGTTCTGTGCTTaGTTTTCGGTTTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: GLLQRSPRAEGPLGTPQLCLFCA*FSVSPC
Trigger: GCACGGGGAAACCGAAAACAAAGCACAGAACAAGCA...CAGCTGTGGTGTGCCAAGTGGGCCCTCAGCTCTAGGGCTCCTTTGAAGCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGACAGCAGCGGACGCAGTaGCGCATGAAGTCGACACAG +
Preference number: 5 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGQQRTQ*RMKSTQ
Trigger: CTGTGTCGACTTCATGCGCAACTGCGTCCGCTGCTG...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CAA 90 bp GTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAAGAGTGCCCGACAGATaGCAGGTTGTGGGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: VPDRLQVVGRCQAFISGARVPDR*QVVGRC
Trigger: ACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT...TGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS GCA 90 bp CCCTTTTGTGGTAGATGGCACTGTACTTGGCAAGGTTCTTGTCCTTaGAGCCACCCCAGCCCAAGAGAATCACCACAGGCTGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: PFCGRWHCTWQGSCP*SHPSPRESPQAAEF
Trigger: AAACTCGGCAGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372237.8
ENST00000372242.7
ENST00000372243.7
CDS GCA 90 bp GCCTTTTGTGGTAGATGGCACTGTACTTGGCAAGGTTCTTGTCCTTaGAGCCACCCCAGCCCAAGAGAATCACCACAGGCTGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: AFCGRWHCTWQGSCP*SHPSPRESPQAAEF
Trigger: AAACTCGGCAGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420706.1
CDS-3UTR CAA 90 bp GGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: GWWLVIHPFHHVGTAAGGLKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...CCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp TCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCCAGCGGAAAACTATaGGGAAGAGGCCCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPGRWLPRYKQLTRRHWHSSGKL*GRGPGL
Trigger: AAGACCTGGGCCTCTTCCCAATAGTTTTCCGCTGGA...GTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTGAGAGTGCCCGACAGATaGCAGGTTGTGGGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: DRLQVVGRCQAFISGAEVRVPDR*QVVGRC
Trigger: ACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT...CACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS GCA 90 bp TCCTTTTGTGGTAGATGGCACTGTACTTGGCAAGGTTCTTGTCCTTaGAGCCACCCCAGCCCAAGAGAATCACCACAGGCTGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: SFCGRWHCTWQGSCP*SHPSPRESPQAAEF
Trigger: AAACTCGGCAGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372235.7
CDS CCA 90 bp AGAGCAGCTCGAGCAGCTTCCTTTTGTGGTAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGCAGCCACCCCAGCCCAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: RAARAASFCGRWHCT*QGSCPCSHPSPRES
Trigger: TGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGAAGCTGCTCGAGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372235.7
CDS CCA 90 bp AGGAGGCCATGCAGAAGACCCTTTTGTGGTAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGCAGCCACCCCAGCCCAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: RRPCRRPFCGRWHCT*QGSCPCSHPSPRES
Trigger: TGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGGTCTTCTGCATGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372243.7
CDS CCA 90 bp CAAAGAGCAGCTCGAGCAGCCTTTTGTGGTAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGCAGCCACCCCAGCCCAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: QRAARAAFCGRWHCT*QGSCPCSHPSPRES
Trigger: TGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGCTGCTCGAGCTGCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420706.1
CDS-3UTR CAA 90 bp GATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGGCTTCGGGTGATGCATaGAAGGTGACAGCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: DAVDIEHENNNRFEEYEWASGDA*KVTAKP
Trigger: CGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGC...CCACTCATACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp CCCAGTCCCCAAAGGAGCAGGAGGTATTTCAAGATGAGGGCCAGATCAGGCACTTGCTTGTTCTGTGCTTaGTTTTCGGTTTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: PSPQRSRRYFKMRARSGTCLFCA*FSVSPC
Trigger: GCACGGGGAAACCGAAAACAAAGCACAGAACAAGCA...AGTGCCTGATCTGGCCCTCATCTTGAAATACCTCCTGCTCCTTTGGGGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp AGCATGATCCTGCTCTGCTCTTCACAGAGGGAAGGCTCCTGCATGGCTGAGGATTGCTTGTTCTGTGCTTaGTTTTCGGTTTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: SMILLCSSQREGSCMAEDCLFCA*FSVSPC
Trigger: GCACGGGGAAACCGAAAACAAAGCACAGAACAAGCA...ATCCTCAGCCATGCAGGAGCCTTCCCTCTGTGAAGAGCAGAGCAGGATCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp GAAGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGTACTTGGCAAGGTTCTaGTCCTTGCAGCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: EECPTDCRLWGGVRHLFLYLARF*SLQPPQ
Trigger: CTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTA...CAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CAA 90 bp AGAGTGCCCGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGATACTTGGCAAGGTTCTaGTCCTTGCAGCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: RVPDRLQVVGRCQAFISGYLARF*SLQPPQ
Trigger: CTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTA...TCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCGGGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372235.7
ENST00000372237.8
CDS-3UTR CAA 90 bp CGACAGATTGCAGGTTGTGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTAAGGGCTACAGGGAGTaGAACGAGAAGAGTGCCCGA +
Preference number: 5 (lower is better)
Translates to: RQIAGCGEVSGIYFWSRGKGYRE*NEKSAR
Trigger: TCGGGCACTCTTCTCGTTCAACTCCCTGTAGCCCTT...ACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCACAACCTGCAATCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CAA 90 bp TTAAACACTGCAAATAGAAAGGTATGGGTAGACCTTGCACCAGCTGCAGCCAAATGGCCGGAGTGTGAGTaGCCCCTCTGTCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LNTANRKVWVDLAPAAAKWPECE*PLCPSR
Trigger: TCTGCTGGGACAGAGGGGCAACTCACACTCCGGCCA...TTTGGCTGCAGCTGGTGCAAGGTCTACCCATACCTTTCTATTTGCAGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp CCGTCTGCTTGTTCTGTGCTTTGTTTTCGGTTTCCCCGTGCAGCTCGGATTGGGAGAACAACAACCGCTTaGAGGAGTATGAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PSACSVLCFRFPRAARIGRTTTA*RSMSGV
Trigger: CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCT...CCCAATCCGAGCTGCACGGGGAAACCGAAAACAAAGCACAGAACAAGCAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCGCAGTGACCGTCTGCTaGTTCTGTGCTTTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPAVTVC*FCALFS
Trigger: CGAAAACAAAGCACAGAACAAGCAGACGGTCACTGC...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp AGGCCCAGGTCTTTGACCTCTAAATTGGTTTGCTTCAAAGGAGCCCTAGAGCTGTACTTGGCAAGGTTCTaGTCCTTGCAGCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: RPRSLTSKLVCFKGALELYLARF*SLQPPQ
Trigger: CTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTA...CAGCTCTAGGGCTCCTTTGAAGCAAACCAATTTAGAGGTCAAAGACCTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372242.7
ENST00000372243.7
CDS-3UTR CAA 90 bp CATAGGAATTTTCTACTTAGGGGACCGCAAAGTCCCAAAGGGCTACAGGGAGTTCTGGCAACTTTCAGCTaGCAACTTTCCCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: HRNFLLRGPQSPKGLQGVLATFS*QLSQTQ
Trigger: CTGGGTCTGGGAAAGTTGCAAGCTGAAAGTTGCCAG...AACTCCCTGTAGCCCTTTGGGACTTTGCGGTCCCCTAAGTAGAAAATTCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372237.8
CDS-3UTR CAA 90 bp ATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGAGAACAACAACCGCTTaGAGGAGTATGAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: MAEDDAVDIEHENNNRFERTTTA*RSMSGV
Trigger: CACACCACTCATACTCCTCAAAGCGGTTGTTGTTCT...CTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp TGCAGCCAAAGAGTGGACTTACTCACTGGCTTAGTTAGCACCAGTCTCCTCCCCTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: CSQRVDLLTGLVSTSLLPLKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...GGGGAGGAGACTGGTGCTAACTAAGCCAGTGAGTAAGTCCACTCTTTGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS-3UTR CAA 90 bp ATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGGTAGAGGGGCCATCACCACCCTTAAAATGGATGTATTaGGGTGGGGAAATGGAATTG +
Preference number: 5 (lower is better)
Translates to: MSRHVEHCLSKVEGPSPPLKWMY*GGEMEL
Trigger: CAATTCCATTTCCCCACCCAAATACATCCATTTTAA...GGGTGGTGATGGCCCCTCTACCTTAGAAAGGCAATGCTCCACATGCCTACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS CAA 72 bp CGGCCCAGAGCACGGGTCTCCAGCCGGAACTCCCGCTaGCGCACCCGTGCCTCACCCGGGCGCCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: RPRARVSSRNSR*RTRASPGRLLG
Trigger: GCCCAGGAGGCGCCCGGGTGAGGCACGGGTGCGCAAGCGGGAGTTCCGGCTGGAGACCCGTGCTCTGGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372237.8
ENST00000372244.3
ENST00000468117.1
CDS GCA 72 bp GGATGGCTGCCAGGGCCCGCAGAGCCCCTACCAGGTTaGTGTCACCAGGAGCGCTGTCAAAGATGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: GWLPGPAEPLPG*CHQERCQRWCP
Trigger: TGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTAGGGGCTCTGCGGGCCCTGGCAGCCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000420706.1
ENST00000468117.1
ENST00000476724.1
CDS GCA 72 bp GCGCCAGGACCCGGCGTGCCAGGCGTGCCTCCACCATaGGTTCTATGTCTCTGGCCAGGACTACTTCGTCAG +
Preference number: 6 (lower is better)
Translates to: APGPGVPGVPPP*VLCLWPGLLRQ
Trigger: CTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCATGGTGGAGGCACGCCTGGCACGCCGGGTCCTGGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS GCA 72 bp ATCCACAGAACGCGCCAGGACCCGGCGTGCCAGGCGTaGCTCCACCATGCGTTCTATGTCTCTGGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: IHRTRQDPACQA*LHHAFYVSGQD
Trigger: GTCCTGGCCAGAGACATAGAACGCATGGTGGAGGCACGCCTGGCACGCCGGGTCCTGGCGCGTTCTGTGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS GCA 72 bp AGCACCTGTGCTGCCCAGTCTGGCCGGAGTGTGAGTTaGCCCTCTGTCCCAGCAGAGATGCCATCCACCAGC +
Preference number: 6 (lower is better)
Translates to: STCAAQSGRSVS*PSVPAEMPSTS
Trigger: GCTGGTGGATGGCATCTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCCAGACTGGGCAGCACAGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS GCA 72 bp CCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATGGTaGCCACCACACGCAGGCGGCAGAAGCGACGGGTCT +
Preference number: 6 (lower is better)
Translates to: PGCCHQERCQRW*PPHAGGRSDGS
Trigger: AGACCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000372242.7
ENST00000420706.1
ENST00000468117.1
ENST00000476724.1
CDS CCA 72 bp AGACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGCGGCAGAAGCGACGGG +
Preference number: 6 (lower is better)
Translates to: RPGCCHQERCQR*CPPHAGGRSDG
Trigger: CCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372242.7
CDS CCA 72 bp CTACCAGGTTGCTGTCACCAGGAGCGCTGTCAAAGATaGTGCCCACCACACGCAGGCGGCAGAAGCGACGGG +
Preference number: 6 (lower is better)
Translates to: LPGCCHQERCQR*CPPHAGGRSDG
Trigger: CCCGTCGCTTCTGCCGCCTGCGTGTGGTGGGCACCATCTTTGACAGCGCTCCTGGTGACAGCAACCTGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000420706.1
ENST00000468117.1
ENST00000476724.1
CDS TCA 72 bp GCGTTAGCACCTGTGCTGCCCAGTCTGGCCGGAGTGTaGGTTGCCCCTCTGTCCCAGCAGAGATGCCATCCA +
Preference number: 6 (lower is better)
Translates to: ALAPVLPSLAGV*VAPLSQQRCHP
Trigger: TGGATGGCATCTCTGCTGGGACAGAGGGGCAACTCACACTCCGGCCAGACTGGGCAGCACAGGTGCTAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372242.7
ENST00000372243.7
ENST00000372244.3
CDS CCA 72 bp GTGTGGAAGAGGGCTGTGATGGGAGCAAGCAGGACGTaGAACAGGACGACCACCAGGGCAAAGGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: VWKRAVMGASRT*NRTTTRAKATS
Trigger: GCTGGTGGCCTTTGCCCTGGTGGTCGTCCTGTTCCACGTCCTGCTTGCTCCCATCACAGCCCTCTTCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS TCA 72 bp AGTAGGGTAGTCACGGAGGTGGCTGACGTGTGCAGATaGCACGAAATCCACAGAACGCGCCAGGACCCGGCG +
Preference number: 6 (lower is better)
Translates to: SRVVTEVADVCR*HEIHRTRQDPA
Trigger: CGCCGGGTCCTGGCGCGTTCTGTGGATTTCGTGTCATCTGCACACGTCAGCCACCTCCGTGACTACCCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS CCA 72 bp GTGCCAGGCGTGCCTCCACCATGCGTTCTATGTCTCTaGCCAGGACTACTTCGTCAGCCCTCGAGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: VPGVPPPCVLCL*PGLLRQPSSRG
Trigger: ACCTCTACTCGAGGGCTGACGAAGTAGTCCTGGCCAGAGACATAGAACGCATGGTGGAGGCACGCCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS TCA 72 bp GTAGCCTGTCATAGAAGTGGGTGTGGAAGAGGGCTGTaGTGGGAGCAAGCAGGACGTGGAACAGGACGACCA +
Preference number: 6 (lower is better)
Translates to: VACHRSGCGRGL*WEQAGRGTGRP
Trigger: TGGTCGTCCTGTTCCACGTCCTGCTTGCTCCCATCACAGCCCTCTTCCACACCCACTTCTATGACAGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS GCA 72 bp GAAGGGATACCCAGTGACTCGGAGAAGAAGACCATGTaGCACGGGGCTGTGTATCGGATTACGATGCAGCCC +
Preference number: 6 (lower is better)
Translates to: EGIPSDSEKKTM*HGAVYRITMQP
Trigger: GGGCTGCATCGTAATCCGATACACAGCCCCGTGGCACATGGTCTTCTTCTCCGAGTCACTGGGTATCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372237.8
ENST00000372242.7
CDS TCA 72 bp TGGGGAGGTGTCAGGCATTTATTTCTGGAGCAGAGGTaGGATGGAGCAATGGCCTCAGCAGCGGACGCAGTT +
Preference number: 6 (lower is better)
Translates to: WGGVRHLFLEQR*DGAMASAADAV
Trigger: AACTGCGTCCGCTGCTGAGGCCATTGCTCCATCTCACCTCTGCTCCAGAAATAAATGCCTGACACCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000468117.1
ENST00000476724.1
CDS GCA 72 bp GGTAGATGGCACTGTACTTGGCAAGGTTCTTGTCCTTaGAGCCACCCCAGCCCAAGAGAATCACCACAGGCT +
Preference number: 6 (lower is better)
Translates to: GRWHCTWQGSCP*SHPSPRESPQA
Trigger: AGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372235.7
ENST00000372237.8
ENST00000372242.7
ENST00000372243.7
ENST00000420706.1
CDS GCA 72 bp GAAGGGATACCCAGTGACTCGGAGAAGAAGACCATGTaGCACGGGGCTGTGTATCGGATTACGATGCAGCCT +
Preference number: 6 (lower is better)
Translates to: EGIPSDSEKKTM*HGAVYRITMQP
Trigger: AGGCTGCATCGTAATCCGATACACAGCCCCGTGGCACATGGTCTTCTTCTCCGAGTCACTGGGTATCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476724.1
CDS CCA 72 bp CGAGCAGCTTCCTTTTGTGGTAGATGGCACTGTACTTaGCAAGGTTCTTGTCCTTGCAGCCACCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RAASFCGRWHCT*QGSCPCSHPSP
Trigger: TGGGCTGGGGTGGCTGCAAGGACAAGAACCTTGCCAAGTACAGTGCCATCTACCACAAAAGGAAGCTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372235.7