RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM44 (Homo sapiens)

Ensembl gene IDs: ENSG00000145014

Ensembl transcript IDs: ENST00000330115.3, ENST00000347147.9, ENST00000381975.7, ENST00000392432.6, ENST00000419280.5, ENST00000429560.1, ENST00000430601.1, ENST00000432352.5, ENST00000452358.5, ENST00000467284.1, ENST00000473092.5, ENST00000476750.1, ENST00000477651.5, ENST00000494894.5

Found 699 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCAGCCTGCCTGCTGCACAGGCTCGAT +
Preference number: 1 (lower is better)
Translates to: GVLQGRISGARLPVT*QPGGTAACLLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR CCA 90 bp TTTCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATaGTGGCTGAAGCCTTCGGGACAGCAACCCACAGAGCCCAGCACG +
Preference number: 1 (lower is better)
Translates to: FPAAGSLAASAVAPG*WLKPSGQQPTEPST
Trigger: CGTGCTGGGCTCTGTGGGTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430601.1
3UTR GCA 90 bp TTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCCTGGGTTGGCTaGCCACTCTCCACACACACCCCCTCCTTGCTGTCATACACACTA +
Preference number: 1 (lower is better)
Translates to: FPREAPAVLRTPWVG*PLSTHTPSLLSYTL
Trigger: TAGTGTGTATGACAGCAAGGAGGGGGTGTGTGTGGAGAGTGGGCAGCCAACCCAGGGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR TCA 90 bp ACCCCCTCCTTGCTGTCATACACACTAACGCTCTTCAGGAAAAGCTaGGCCCATGTCCATGCACCCACGGTGACGCCACACCTCCGCCCC +
Preference number: 1 (lower is better)
Translates to: TPSLLSYTLTLFRKS*AHVHAPTVTPHLRP
Trigger: GGGGCGGAGGTGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAGCTTTTCCTGAAGAGCGTTAGTGTGTATGACAGCAAGGAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR GCA 90 bp GTCATACACACTAACGCTCTTCAGGAAAAGCTGAGCCCATGTCCATaGACCCACGGTGACGCCACACCTCCGCCCCATGACCCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: VIHTNALQEKLSPCP*THGDATPPPHDPLR
Trigger: CCTGAGAGGGTCATGGGGCGGAGGTGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAGCTTTTCCTGAAGAGCGTTAGTGTGTATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR GCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTG +
Preference number: 1 (lower is better)
Translates to: VPHLPGQLQFLPRCQ*RLIPAALLNELLTL
Trigger: CAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 90 bp CACAGTCCTATCGATAACTTCCAGCAGATAACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCTCGGTTCCTGTGTGTGACCCAAGGC +
Preference number: 1 (lower is better)
Translates to: HSPIDNFQQITQVGD*GVEARSRFLCVTQG
Trigger: GCCTTGGGTCACACACAGGAACCGAGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGTTATCTGCTGGAAGTTATCGATAGGACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 90 bp CGCGCCCGGCCTAAGACACTCTTGATCTACACAGAACCTCACACCTaGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGC +
Preference number: 1 (lower is better)
Translates to: RARPKTLLIYTEPHT*LPVRCQISFSYGFS
Trigger: GCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGTGTCTTAGGCCGGGCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR CCA 90 bp GCACAGGGCCCACCCTCTCATCTGGCTCAGCCAGGTCTTGCAGAATaGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTAGG +
Preference number: 1 (lower is better)
Translates to: AQGPPSHLAQPGLAE*ALLRSNQTHLLSVR
Trigger: CCTAACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGCCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 90 bp ACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATaGGTTCAGCCTCAGGGGCTTCTTCCTCAGAGCCTGCTTTTCATT +
Preference number: 1 (lower is better)
Translates to: TSHLAACPVSNLLLL*VQPQGLLPQSLLFI
Trigger: AATGAAAAGCAGGCTCTGAGGAAGAAGCCCCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATCATCATCACTCAGGTGTGCTGTCCT +
Preference number: 1 (lower is better)
Translates to: ALLNELLTLGSELMS*LQKVLIIITQVCCP
Trigger: AGGACAGCACACCTGAGTGATGATGATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR CCA 90 bp CACAGGTCAAAAGGGCTTGGGTGTCAGGGCTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCACACACG +
Preference number: 1 (lower is better)
Translates to: HRSKGLGCQGSLWLP*QILRPVSSCSSSHT
Trigger: CGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR GCA 90 bp CAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTaGAGTGTCAGTGATCTCACAAGCACTTGGTTGGCCACACAGTCC +
Preference number: 1 (lower is better)
Translates to: QVGGSPGTRSSLLCF*SVSDLTSTWLATQS
Trigger: GGACTGTGTGGCCAACCAAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 90 bp CACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGGTTGG +
Preference number: 1 (lower is better)
Translates to: HTLARLEEVLVPGAV*FVFAVSVISQALGW
Trigger: CCAACCAAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR TCA 90 bp ATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTaGGCTGATGAGCTGGCTCCAGAAGGTGTTAATCATCATCACTCA +
Preference number: 1 (lower is better)
Translates to: IDSRCVTERTPDPGL*ADELAPEGVNHHHS
Trigger: TGAGTGATGATGATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR CCA 90 bp TACGAAGCAAAAGCTTCTGTGAACTGTGATCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCG +
Preference number: 1 (lower is better)
Translates to: YEAKASVNCDLQNEC*AYPGLSAVPKVVAP
Trigger: CGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR TCA 90 bp CACCCTCTCATCTGGCTCAGCCAGGTCTTGCAGAATGGGCTCTGCTaGGATCTAACCAGACACATTTGCTATCTGTTAGGTGAGCTCATT +
Preference number: 1 (lower is better)
Translates to: HPLIWLSQVLQNGLC*DLTRHICYLLGELI
Trigger: AATGAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCCAGATGAGAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR TCA 90 bp TGGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTAGCAGGTATTCCGTTCATGGCTGAC +
Preference number: 1 (lower is better)
Translates to: WALLRSNQTHLLSVR*AHSWNLAGIPFMAD
Trigger: GTCAGCCATGAACGGAATACCTGCTAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 90 bp CTTTACGAAGCAAAAGCTTCTGTGAACTGTGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCT +
Preference number: 1 (lower is better)
Translates to: LYEAKASVNCDLQNE*WAYPGLSAVPKVVA
Trigger: AGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTTCGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 90 bp GTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGGTTaGCCACACAGTCCTATCGATAACTTCCAGCAGATAACCCAAGTG +
Preference number: 1 (lower is better)
Translates to: VCFVFAVSVISQALG*PHSPIDNFQQITQV
Trigger: CACTTGGGTTATCTGCTGGAAGTTATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACCCAGCCACACTCAGTaGCGGCTCCTGGTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: APSPASPASAHTLARLEEPSHTQ*RLLVPH
Trigger: GTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGGG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 2 (lower is better)
Translates to: GSCRDASPALVCPSPGSLSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR CCA 90 bp CGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTCTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: RLSAHPCQVGGSPGTRSSLSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...ACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp GGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GSCRDASPALVCPSPGSLSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR CAA 90 bp AGCATACAGCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SIQPPHLQAPPQRTP*PGWRKSWYPEQFAL
Trigger: CAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGCTGTATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GGAGCTGCCGGAAGACACCCGGGCCCGGATGACCTGAACGGGAGGGTACGACGGGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: GAAGRHPGPDDLNGRVRRAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...CCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGTCTTCCGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR CCA 90 bp ATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCTGCCGGACGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: ILLLQVGVDGGDLRGAAGRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...TCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR TCA 90 bp GCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGGCTTCTTTCCATGCACCCACGGTaGCGCCACACCTCCGCCCCA +
Preference number: 2 (lower is better)
Translates to: ACPVSNLLLLWVQPQGLLSMHPR*RHTSAP
Trigger: TGGGGCGGAGGTGTGGCGTCACCGTGGGTGCATGGA...AAGAAGCCCCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR TCA 90 bp GAAATGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACTCTTCAGGAAAAGCTaGGCCCATGTCCATGCACCC +
Preference number: 2 (lower is better)
Translates to: EMGKNTRAFPERLPPSSGLFRKS*AHVHAP
Trigger: GGGTGCATGGACATGGGCTCAGCTTTTCCTGAAGAG...TCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR TCA 90 bp AGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGCAGCACCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 2 (lower is better)
Translates to: RQQRYPAGSRGSQYFPAAPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...TGCTGCAGGAAAATACTGAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430601.1
3UTR-3UTR GCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGCTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVLPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 90 bp CACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: HLPGQLQFLPRCQCR*IPAALLNELLTLGS
Trigger: AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 2 (lower is better)
Translates to: APSPASPASAHTLARLEESFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: VPHLPGQLQFLPRCQCRLLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...CAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR-3UTR TCA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCACACCTCCGCCCCATaGCCCTCTCAGGATGCTCCC +
Preference number: 2 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLHTSAP*PSQDAP
Trigger: GGGAGCATCCTGAGAGGGTCATGGGGCGGAGGTGTG...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR GCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 2 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCGTCCTCAGGACGCCCTaGGTTGGCTGCCCACTCTCC +
Preference number: 2 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLVLRTP*VGCPLS
Trigger: GGAGAGTGGGCAGCCAACCCAGGGCGTCCTGAGGAC...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR CCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR-3UTR GCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCCTGAGCCCATGTCCATaGACCCACGGTGACGCCACA +
Preference number: 2 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLLSPCP*THGDAT
Trigger: TGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAG...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR CCA 90 bp GCCTCCCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: ASQYFCSRSELMEETSEEQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...CTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR GCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLISWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLSWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACACCCAGCCACACTCAGTaGCGGCTCCTGGTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTPSHTQ*RLLVPH
Trigger: GTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGGG...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVSWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCCTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVILSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 2 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR-3UTR CCA 90 bp CCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCTGCCTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 2 (lower is better)
Translates to: PILLLQVGVDGGDLRGAACQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...GGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR CAA 90 bp GCACAGGTCAAAAGGGCTTGGGTGTCAGGGCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCACACAC +
Preference number: 2 (lower is better)
Translates to: AQVKRAWVSGLSLAS*ANPKACLILLFITH
Trigger: GTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR GCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 2 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAACTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQLPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 90 bp GCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: AHPCQVGGSPGTRSS*LCFCSVSDLTSTWL
Trigger: CAACCAAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp ATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTCTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 2 (lower is better)
Translates to: MADSQGNEGKRKSGSEILLRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...AAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCCTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 2 (lower is better)
Translates to: SPIPCALTLTHRSIKITPLRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGSWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTACTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGCCCACCCTCTCATCTaGCTCAGCCAGGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PCALTLTHRSIKITPKWDAHPLI*LSQVLQ
Trigger: CTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 2 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 2 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 2 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLIKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAACTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKLPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIDLQNE*WAYPGL
Trigger: CAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CAGTATCAAAATAACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCCACCCTCTCATCTaGCTCAGCCAGGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: QYQNNSQMGLLCLNTSHHAHPLI*LSQVLQ
Trigger: CTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGC...ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PCALTLTHRSIKITPKWDGWRKS*YPEQFA
Trigger: AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 2 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAAGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 2 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR-3UTR TCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTTTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTA +
Preference number: 2 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSLLSVR*AHSWNL
Trigger: TAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAA...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCAGAATGGGCTCTGCTaGGATCTAACCAGACACATT +
Preference number: 2 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLQNGLC*DLTRHI
Trigger: AATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTG...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: PCALTLTHRSIKITPKWDDLQNE*WAYPGL
Trigger: CAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 2 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 2 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 2 (lower is better)
Translates to: SPIPCALTLTHRSIKITPKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 2 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR TCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 2 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATCAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: PCALTLTHRSIKITPKWDQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 90 bp CCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATaGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: PYPYSSQYQNNSQMG*LCLNTSHHASYLLH
Trigger: ATGCAGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 90 bp GGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAAAGGAAAATAATACAAAGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GLSLASLANPKACLI*LFITHERKIIQREE
Trigger: TTCTTCCCTTTGTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR CCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTGGGTCTGAGATCCTTTaGATTATCTTTACGAAGCAA +
Preference number: 2 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLGSEIL*IIFTKQ
Trigger: TTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCC...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CCA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAACAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR GCA 90 bp CAGTATCAAAATAACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: QYQNNSQMGLLCLNTSHHVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp CTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCTGCACAGGCTCGATGG +
Preference number: 3 (lower is better)
Translates to: LRRSSARHLAAW*HCSLPAAQARW
Trigger: CCATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR CCA 72 bp TTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCCTaGGTTGGCTGCCCACTCTCCACACACACCCCCTCC +
Preference number: 3 (lower is better)
Translates to: FPREAPAVLRTP*VGCPLSTHTPS
Trigger: GGAGGGGGTGTGTGTGGAGAGTGGGCAGCCAACCCAGGGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR CCA 72 bp GGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAGCAACCCACAGAGCCC +
Preference number: 3 (lower is better)
Translates to: GSLAASAVAPGW*LKPSGQQPTEP
Trigger: GGGCTCTGTGGGTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430601.1
3UTR-3UTR CAA 90 bp CTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCCTGGGTTGGCTGCCCACTACACACACCCCCTCCTaGCTGTCATACACACTAACG +
Preference number: 3 (lower is better)
Translates to: LSPRGSRRPQDALGWLPTTHTPS*LSYTLT
Trigger: CGTTAGTGTGTATGACAGCAAGGAGGGGGTGTGTGT...AGTGGGCAGCCAACCCAGGGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR CAA 90 bp GGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTGGCACTGCACTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 3 (lower is better)
Translates to: GRISGARLPVTWQPGGTALSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR CAA 90 bp GGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: GSCRDASPALVCPSPGSLIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR GCA 72 bp CCAGCCACACTCAGTGACGGCTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGT +
Preference number: 3 (lower is better)
Translates to: PATLSDGSWFLT*QGSFSSCRGVS
Trigger: ACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp CTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTaGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTG +
Preference number: 3 (lower is better)
Translates to: LQAPPQRTPLPG*RKSWYPEQFAL
Trigger: CAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CAA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCCCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 72 bp ACTAACGCTCTTCAGGAAAAGCTGAGCCCATGTCCATaGACCCACGGTGACGCCACACCTCCGCCCCATGAC +
Preference number: 3 (lower is better)
Translates to: TNALQEKLSPCP*THGDATPPPHD
Trigger: GTCATGGGGCGGAGGTGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAGCTTTTCCTGAAGAGCGTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR CAA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CAA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCC +
Preference number: 3 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLHTLAR*EEVLVP
Trigger: GGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CAA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 3 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 72 bp TTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCGTTACTGAACGAACTC +
Preference number: 3 (lower is better)
Translates to: LPGQLQFLPRCQ*RLIPAALLNEL
Trigger: GAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp CTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATaGGTTCAGCCTCAGGGGCTTCTTCCTCAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: LAACPVSNLLLL*VQPQGLLPQSL
Trigger: CAGGCTCTGAGGAAGAAGCCCCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR CCA 72 bp ATCGATAACTTCCAGCAGATAACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCTCGGTTCCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: IDNFQQITQVGD*GVEARSRFLCV
Trigger: CACACACAGGAACCGAGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGTTATCTGCTGGAAGTTATCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp CCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGT +
Preference number: 3 (lower is better)
Translates to: PQRTPLPGWRKS*YPEQFALFLQC
Trigger: ACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: LRCAVLTESWCT*DPSSSTFSLLP
Trigger: AGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
3UTR TCA 72 bp TTGCTGTCATACACACTAACGCTCTTCAGGAAAAGCTaGGCCCATGTCCATGCACCCACGGTGACGCCACAC +
Preference number: 3 (lower is better)
Translates to: LLSYTLTLFRKS*AHVHAPTVTPH
Trigger: GTGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAGCTTTTCCTGAAGAGCGTTAGTGTGTATGACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR GCA 72 bp TGGCTCCAGAAGGTGTTAATCATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTGGTGCACCTGGGATCC +
Preference number: 3 (lower is better)
Translates to: WLQKVLIIITQV*CPHRVLVHLGS
Trigger: GGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTGATGATGATTAACACCTTCTGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR TCA 72 bp ATGCCTCTTACCTTCTGCATGCATTTAGTTAGTTCCTaGAGCATACAGCCCCCTCACCTGCAAGCCCCGCCT +
Preference number: 3 (lower is better)
Translates to: MPLTFCMHLVSS*SIQPPHLQAPP
Trigger: AGGCGGGGCTTGCAGGTGAGGGGGCTGTATGCTTCAGGAACTAACTAAATGCATGCAGAAGGTAAGAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp TCATCATCACTCAGGTGTGCTGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGTAGCTCCACATTTTCT +
Preference number: 3 (lower is better)
Translates to: SSSLRCAVLTES*CTWDPSSSTFS
Trigger: AGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTGATGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
3UTR CCA 72 bp AACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATCATCATCACTCAGGTG +
Preference number: 3 (lower is better)
Translates to: NELLTLGSELMS*LQKVLIIITQV
Trigger: CACCTGAGTGATGATGATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR CCA 72 bp AAAGGGCTTGGGTGTCAGGGCTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: KGLGCQGSLWLP*QILRPVSSCSS
Trigger: TGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR-3UTR CAA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 3 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CAA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCATGGGATTGCTGTGCTaGAACACCTCCCATCATGCC +
Preference number: 3 (lower is better)
Translates to: SPIPCALTLTHRSIKITPMGLLC*NTSHHA
Trigger: GGCATGATGGGAGGTGTTCAAGCACAGCAATCCCAT...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 72 bp GCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCA +
Preference number: 3 (lower is better)
Translates to: ARLEEVLVPGAV*FVFAVSVISQA
Trigger: TGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 72 bp GCAAAAGCTTCTGTGAACTGTGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAA +
Preference number: 3 (lower is better)
Translates to: AKASVNCDLQNE*WAYPGLSAVPK
Trigger: TTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp AAAGCTTCTGTGAACTGTGATCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: KASVNCDLQNEC*AYPGLSAVPKV
Trigger: GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp TTTTCTTCCTCTTTCTCTGCACAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTGGCTTCCTTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: FSSSFSAQVKRA*VSGLSLASLAN
Trigger: ATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419280.5
3UTR CCA 72 bp CCTAAGACACTCTTGATCTACACAGAACCTCACACCTaGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTAT +
Preference number: 3 (lower is better)
Translates to: PKTLLIYTEPHT*LPVRCQISFSY
Trigger: ATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGTGTCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
3UTR-3UTR CAA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAACGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 3 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR-3UTR CAA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: PCALTLTHRSIKITPKWDGTRSS*LCFCSV
Trigger: GACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR GCA 72 bp TCGCAGTATCAAAATAACTCCCAAATGGGATTGCTGTaGTTGAACACCTCCCATCATGCCTCTTACCTTCTG +
Preference number: 3 (lower is better)
Translates to: SQYQNNSQMGLL*LNTSHHASYLL
Trigger: CAGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CCA 72 bp GTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGGTTaGCCACACAGTCCTATCGATAACTTCCAGCAGATA +
Preference number: 3 (lower is better)
Translates to: VFAVSVISQALG*PHSPIDNFQQI
Trigger: TATCTGCTGGAAGTTATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATCACTGACACTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR TCA 72 bp GGATTATCTTTACGAAGCAAAAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTGGGCCTATCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GLSLRSKSFCEL*SSERMLGLSRS
Trigger: AGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTTCGTAAAGATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTGGCACTGCACGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: GRISGARLPVTWQPGGTARARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp GGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: GSCRDASPALVCPSPGSLPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GGGTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GSCRDASPALVCPSPGSLRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp GCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATGGTGGCTGAAGCCTCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: AAGSLAASAVAPGWWLKPPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...AGGCTTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR TCA 90 bp GCACCCACGGTGACGCCACACCTCCGCCCCATGACCCTCTCAGGATGCTCCCAGTCCATGCACCCACGGTaGCGCCACACCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: APTVTPHLRPMTLSGCSQSMHPR*RHTSAP
Trigger: TGGGGCGGAGGTGTGGCGTCACCGTGGGTGCATGGA...CTGGGAGCATCCTGAGAGGGTCATGGGGCGGAGGTGTGGCGTCACCGTGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp TCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATGGTGGCTGAAACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SCSRLASSLRCGPRMVAETGRRR*RRGGGR
Trigger: TCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGT...TTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR GCA 90 bp GTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: VLQGRISGARLPVTWQPGGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...ACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEEVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEERLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp GGAAATGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGCACACCTCCGCCCCATaGCCCTCTCAGGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: GNGEEHTGFPREAPAVLRHTSAP*PSQDAP
Trigger: GGGAGCATCCTGAGAGGGTCATGGGGCGGAGGTGTG...CCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCATTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVRPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEELPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCCGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: WGRTHGLSPRGSRRPQDARCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...GGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEERCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GAGAAGCCCAGGAGCCAAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCCGCGTGCCCTTCTCTaGGTTCCGTTCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: EKPRSQRQQRYPAGSRGSPRALL*VPFRRG
Trigger: GCCGCGGCGGAACGGAACCCAGAGAAGGGCACGCGG...AGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGCTCCTGGGCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCCACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVHLAAW*HCSLPA
Trigger: AGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCGGTGGCACTGCAGCCTaGTGCACAGGCTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVGGTAA*CTGSMV
Trigger: GACCATCGAGCCTGTGCAGCAGGCTGCAGTGCCACC...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR GCA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCCCCACTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSPTQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGTGGG...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429560.1
CDS-3UTR CCA 90 bp GGATCTCAGTATTTTCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: GSQYFPAAGSLAASAVAPVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...GGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEEESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCTCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLSPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVSPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCTACAGCCCCCTCACCTaGAAGCCCCGCCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSYSPLT*KPRLSA
Trigger: TGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGCTGTA...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CCA 90 bp GTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTCCGACTGGTCCTGTCTaGGTTTCTGTGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: VLQGRISGARLPVTWQPGPTGPV*VSVHIS
Trigger: TGAGATGTGCACAGAAACCCAGACAGGACCAGTCGG...ACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GAAATGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACAGGACGCCCTGGGTTaGCTGCCCACTCTCCACACA +
Preference number: 4 (lower is better)
Translates to: EMGKNTRAFPERLPPSSGQDALG*LPTLHT
Trigger: TGTGTGGAGAGTGGGCAGCCAACCCAGGGCGTCCTG...TCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCGRGPQ*PRHRGG
Trigger: GCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACC...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTAGGTACTCAGGGTGCTaGTCGTGGGCCACAATGGCC +
Preference number: 4 (lower is better)
Translates to: RLSAHPCQVGGSPGTRSSRYSGC*SWATMA
Trigger: GGCCATTGTGGCCCACGACCAGCACCCTGAGTACCT...ACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCACACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SWFLTCQGSFSSCRGVSAHLAAW*HCSLPA
Trigger: AGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...TGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCCTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVLSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCCACCTGGCAGCCTGGTaGCACTGCAGCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSHLAAW*HCSLLH
Trigger: GTGCAGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp GTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VLQGRISGARLPVTWQPGSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...ACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSERARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GGAGCTGCCGGAAGACACCCGGGCCCGGATGACCTGAACGGGAGGGTACGACGGATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAAGRHPGPDDLNGRVRRISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...CCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGTCTTCCGGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp TGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCAACCTCACACCTGGCTaGCTGTCCGGTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: WGRTHGLSPRGSRRPQDANLTPG*LSGVKS
Trigger: AGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTT...GGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGCGCCGCCGCCCCGCGTaGCCTTCTCTGGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELRRRPA*PSLGSV
Trigger: AACGGAACCCAGAGAAGGGCACGCGGGGCGGCGGCG...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000473092.5
CDS-3UTR GCA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSTGRRR*RRGGGR
Trigger: TCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGT...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVTGRRR*RRGGGR
Trigger: TCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GCCTCCCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGTCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASQYFCSRSELMEETSEESPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...CTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQRPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTGGCTCAGCCAGGTCTTaGAGAATGGGCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RLSAHPCQVGGSPGTRSSGSARS*RMGSAE
Trigger: CTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCC...ACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGGGCACTGCAGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PAALLNELLTLGSELMSWGTAAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCTGCAGTGCC...CCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CCA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTCCGCGTGCCCTTCTCTaGGTTCCGTTCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLPRALL*VPFRRG
Trigger: GCCGCGGCGGAACGGAACCCAGAGAAGGGCACGCGG...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347147.9
ENST00000392432.6
CDS-3UTR CCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGCCGCGTGCCCTTCTCTaGGTTCCGTTCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELPRALL*VPFRRG
Trigger: GCCGCGGCGGAACGGAACCCAGAGAAGGGCACGCGG...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347147.9
ENST00000392432.6
CDS-3UTR CCA 90 bp GTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: VLQGRISGARLPVTWQPGCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...ACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQHLAAW*HCSLPA
Trigger: AGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
3UTR CAA 72 bp CCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PASPASAHTLAR*EEVLVPGAVCF
Trigger: AAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGACGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: SPGAPGIPVAPHFLCCLRRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...TCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGAGGTACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: PGAPGIPVAPHFLCCLRGTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...ACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVARSTQ*RLVLSG
Trigger: CCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGC...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp TCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATGGTGGCTGAAATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCSRLASSLRCGPRMVAEISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...TTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR GCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCCGCCGCCGCCCCGCGTaGCCTTCTCTGGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVRRRPA*PSLGSV
Trigger: AACGGAACCCAGAGAAGGGCACGCGGGGCGGCGGCG...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347147.9
ENST00000392432.6
CDS-3UTR GCA 90 bp AAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGCAGCGCCGCCGCCCCGCGTaGCCTTCTCTGGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: KGSNATQQVAEDLSIFLQRRRPA*PSLGSV
Trigger: AACGGAACCCAGAGAAGGGCACGCGGGGCGGCGGCG...CTGCAGGAAAATACTGAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR GCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCAGCAGGTACTCAGGGTaGTGGTCGTGGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCSRYSG*WSWATM
Trigger: CATTGTGGCCCACGACCAGCACCCTGAGTACCTGCT...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VPHLPGQLQFLPRCQCRLNSEVQ*RTAEGG
Trigger: ACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATT...CAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVNSEVQ*RTAEGG
Trigger: ACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCTGCAGCCTGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQLQPAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp ATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCTGCCGGAGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: ILLLQVGVDGGDLRGAAGAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...TCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp GCCTCCCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASQYFCSRSELMEETSEERPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...CTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp TCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCACGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: SWFLTCQGSFSSCRGVSARCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...TGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATGAGATGCAGACGCGGTaGCGGGCGAAGCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHEMQTR*RAKQRS
Trigger: GGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTC...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GCCAAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGGAGATGCAGACGCGGTaGCGGGCGAAGCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AKGSNATQQVAEDLSIFLEMQTR*RAKQRS
Trigger: GGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTC...CAGGAAAATACTGAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGAGATGCAGACGCGGTaGCGGGCGAAGCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKEMQTR*RAKQRS
Trigger: GGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCTCAGGGTGCTGGTCGTaGGCCACAATGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLSGCWS*ATMAEA
Trigger: TGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGA...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSHLAAW*HCSLPA
Trigger: AGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCTGCCCAAACACACTGGCCCTaGGCTGCCGCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PILLLQVGVDGGDLRGAAQTHWP*AAASSS
Trigger: GGAAGAGGAGGCGGCAGCTCAGGGCCAGTGTGTTTG...GGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSEPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR GCA 90 bp GTCCTGCAGGGACGCATCTCCGGCGCTCGTCTGCCCGTCACCTGGCAGCCTGGTTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLQGRISGARLPVTWQPGFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...ACCAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGATGCGTCCCTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLIAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGGCAGCCTGGTGGCACTaGAGCCTGCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELAAWWH*SLPAAQ
Trigger: CTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGC...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp ACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TESWCTWDPSSSTFSLLPSPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...AGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp GCGGTGTCAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVSVQIDSRCVTERTPDPRPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...AGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGTACAGCCCCCTCACCTaGAAGCCCCGCCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKYSPLT*KPRLSA
Trigger: TGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGCTGTA...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CCGAGAAGCCCAGGAGCCAAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRSPGAKGSNATQQVAEDAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...ATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGCTCCTGGGCTTCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSEVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp ACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGTCCTCAGGACGCCCTaGGTTGGCTGCCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: TWLPVRCQISFSYGFSLRVLRTP*VGCPLS
Trigger: GGAGAGTGGGCAGCCAACCCAGGGCGTCCTGAGGAC...CCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGAGATGCAGACGCGGTaGCGGGCGAAGCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTEMQTR*RAKQRS
Trigger: GGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTC...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLGRGPQ*PRHRGG
Trigger: GCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACC...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGAGGTACTCAGGGTGCTaGTCGTGGGCCACAATGGCC +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVRYSGC*SWATMA
Trigger: GGCCATTGTGGCCCACGACCAGCACCCTGAGTACCT...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTCAGGAACCAGGGTGTaGCCCGCAGCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVSGTRV*PAAGTQ
Trigger: CTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp TCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGAGGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SWCTWDPSSSTFSLLPSRRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSERLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTCTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPLSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAATCACAAGCACTTGGTTaGCCACACAGTCCTATCGAT +
Preference number: 4 (lower is better)
Translates to: APSPASPASAHTLARLEESQALG*PHSPID
Trigger: ATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGA...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCAAACACACTGGCCCTaGGCTGCCGCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSQTHWP*AAASSS
Trigger: GGAAGAGGAGGCGGCAGCTCAGGGCCAGTGTGTTTG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR TCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCCCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTACTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPTPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGT...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCCCAGCCACACTCAGTaGCGGCTCCTGGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSEPSHTQ*RLLVPH
Trigger: GTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGGG...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHARSTQ*RLVLSG
Trigger: CCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGC...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp CACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGACGCCCTGGGTTGGCTaGCCACTCTCCACACACACC +
Preference number: 4 (lower is better)
Translates to: HLAACPVSNLLLLWVQPQTPWVG*PLSTHT
Trigger: GGTGTGTGTGGAGAGTGGGCAGCCAACCCAGGGCGT...CTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCCGCCGCCGCCCCGCGTaGCCTTCTCTGGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: SPIPCALTLTHRSIKITPRRRPA*PSLGSV
Trigger: AACGGAACCCAGAGAAGGGCACGCGGGGCGGCGGCG...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347147.9
ENST00000392432.6
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAGCAGGTACTCAGGGTaGTGGTCGTGGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQSRYSG*WSWATM
Trigger: CATTGTGGCCCACGACCAGCACCCTGAGTACCTGCT...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR GCA 90 bp GCGGTGTCAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AVSVQIDSRCVTERTPDPNSEVQ*RTAEGG
Trigger: ACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATT...AGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGCTGCAGCCTGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKLQPAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAG...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLIGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCATCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSASPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DGSWFLTCQGSFSSCRGVIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...GACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTCTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGLPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCATCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SWFLTCQGSFSSCRGVSASWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...TGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGGGCTCAGCCAGGTCTTaGAGAATGGGCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVGSARS*RMGSAE
Trigger: CTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCC...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTGGCACTGCAGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VLSSQSPGAPGIPVAPHFGTAAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCTGCAGTGCC...AAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp GCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTGGTGGCACTGCAGCCTaGTGCACAGGCTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: AVLTESWCTWDPSSSTFSGGTAA*CTGSMV
Trigger: GACCATCGAGCCTGTGCAGCAGGCTGCAGTGCCACC...AGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSRCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGGCTTCTTCCGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: LSGVKSPSLMGSASGASSVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...GGAAGAAGCCCCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMGRGPQ*PRHRGG
Trigger: GCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATTCAGGGTGCTGGTCGTaGGCCACAATGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHSGCWS*ATMAEA
Trigger: TGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGA...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: VPHLPGQLQFLPRCQCRLVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...CAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGACACCCTTGCCAGGTTaGAGGAAGTCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVTPLPG*RKSWYP
Trigger: CGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGCAAACACACTGGCCCTaGGCTGCCGCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTQTHWP*AAASSS
Trigger: GGAAGAGGAGGCGGCAGCTCAGGGCCAGTGTGTTTG...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCCTAGTCTCCAACTCCTaGCCTCAAGCGACCCGCCCC +
Preference number: 4 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLLVSNS*PQATRP
Trigger: GGGGCGGGTCGCTTGAGGTCAGGAGTTGGAGACTAG...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432352.5
CDS-3UTR GCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTARSTQ*RLVLSG
Trigger: CCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGC...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSATGRRR*RRGGGR
Trigger: TCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGT...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp GGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCCTGCAGCCTGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLSLASLANPKACLILLFLQPAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAG...GAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCTCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLSPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSARPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CACTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSGVLSSQSPGAPGIPVAAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...AGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GCCAAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGCGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: AKGSNATQQVAEDLSIFLRCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...CAGGAAAATACTGAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CCA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GGTTTTCTTCCTCTTTCTCTGCACAGGTCAAAAGGGCTTGGGTGTCAGGGCTCTGTGGCCCCCGGATGGTaGCTGAAGCCTTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: GFLPLSLHRSKGLGCQGSVAPGW*LKPSGQ
Trigger: CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCAC...AGAGCCCTGACACCCAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCGAGATGCAGACGCGGTaGCGGGCGAAGCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIEMQTR*RAKQRS
Trigger: GGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTC...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPHLPGQLQFLPRCQCRLSRVHR*MEGNVF
Trigger: GAAGACATTTCCCTCCATCCACCTGTGGACCCGGCT...CAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGGTACTCAGGGTGCTaGTCGTGGGCCACAATGGCC +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMRYSGC*SWATMA
Trigger: GGCCATTGTGGCCCACGACCAGCACCCTGAGTACCT...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGTCAGGAACCAGGGTGTaGCCCGCAGCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELSGTRV*PAAGTQ
Trigger: CTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGA...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp GCGGTGTCAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTTCAGGAACCAGGGTGTaGCCCGCAGCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: AVSVQIDSRCVTERTPDPSGTRV*PAAGTQ
Trigger: CTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGA...AGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTACACCTGGCAGCCTGGTaGCACTGCAGCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVHLAAW*HCSLLH
Trigger: GTGCAGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
3UTR CAA 72 bp GGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTGAACGAACTCCTGACC +
Preference number: 4 (lower is better)
Translates to: GQLQFLPRCQCR*IPAALLNELLT
Trigger: GGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp ACTCTCCACACACACCCCCTCCTTGCTGTCATACACACTAACGCTCTTCAGGAACAAACACACTGGCCCTaGGCTGCCGCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLHTHPLLAVIHTNALQEQTHWP*AAASSS
Trigger: GGAAGAGGAGGCGGCAGCTCAGGGCCAGTGTGTTTG...TTCCTGAAGAGCGTTAGTGTGTATGACAGCAAGGAGGGGGTGTGTGTGGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGACTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKTPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGT...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
CDS-3UTR TCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCACCCAGCCACACTCAGTaGCGGCTCCTGGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSAPSHTQ*RLLVPH
Trigger: GTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGGG...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTCTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 4 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGLRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCCAGAATGGGCTCTGCTaGGATCTAACCAGACACATT +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCQNGLC*DLTRHI
Trigger: AATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTG...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCGCTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLSLASLANPKACLILLFAPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGC...GAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTTCTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSSPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGA...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473092.5
CDS-3UTR GCA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLARSTQ*RLVLSG
Trigger: CCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGC...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp CCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAALLNELLTLGSELMSWISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...CCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR GCA 90 bp CTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGGCTTCTTCCCTGAGCCCATGTCCATaGACCCACGGTGACGCCACA +
Preference number: 4 (lower is better)
Translates to: LSGVKSPSLMGSASGASSLSPCP*THGDAT
Trigger: TGTGGCGTCACCGTGGGTGCATGGACATGGGCTCAG...GGAAGAAGCCCCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp CGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGAAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RSWLTLKGMKGKGRAGLRNSEVQ*RTAEGG
Trigger: ACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATT...TCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLSAHPCQVGGSPGTRSSFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...ACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAATCTCCGGCGCTCGTCTaGCCGTCACCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKSPALV*PSPGSL
Trigger: CAGGCTGCCAGGTGACGGGCAGACGAGCGCCGGAGA...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGAGACCTCAGAGGAGCTaGCGGAAGACACCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LEEVLVPGAVCFVFAVSVRPQRS*RKTPGP
Trigger: GGGCCCGGGTGTCTTCCGGCAGCTCCTCTGAGGTCT...CACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTTACAGCCCCCTCACCTaGAAGCCCCGCCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSYSPLT*KPRLSA
Trigger: TGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGCTGTA...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TCAGGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCGCCACTAGCAGCTCCTaGAGCTCCACTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGLSLASLANPKACLILLATSSS*SSTGSC
Trigger: ACAGCTGCCAGTGGAGCTGCAGGAGCTGCTAGTGGC...GAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCCGACTGGTCCTGTCTaGGTTTCTGTGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLPTGPV*VSVHIS
Trigger: TGAGATGTGCACAGAAACCCAGACAGGACCAGTCGG...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp TCAGGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCCGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: SGLSLASLANPKACLILLRCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...GAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCATCAGGGTGCTGGTCGTaGGCCACAATGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSASGCWS*ATMAEA
Trigger: TGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGA...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: QRTPLPGWRKSWYPEQFACQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCCACCTGGCAGCCTGGTaGCACTGCAGCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLASLANPKACLILLFIHLAAW*HCSLPA
Trigger: AGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTG...GATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSEESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGAGCCCACCCTCTCATCTaGCTCAGCCAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPGAPGIPVAPHFLCCLRAHPLI*LSQVLQ
Trigger: CTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGC...TCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CCA 90 bp GAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGACACCCTTGCCAGGTTaGAGGAAGTCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: ESWCTWDPSSSTFSLLPSTPLPG*RKSWYP
Trigger: CGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGT...CGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGACACCCTTGCCAGGTTaGAGGAAGTCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSETPLPG*RKSWYP
Trigger: CGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGT...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCCAAACACACTGGCCCTaGGCTGCCGCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIQTHWP*AAASSS
Trigger: GGAAGAGGAGGCGGCAGCTCAGGGCCAGTGTGTTTG...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp GAAGCAAAAGCTTCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: EAKASVNCDLQNECWAYPTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...TGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCCCCAGCCACACTCAGTaGCGGCTCCTGGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SPIPCALTLTHRSIKITPPSHTQ*RLLVPH
Trigger: GTGAGGAACCAGGAGCCGTCACTGAGTGTGGCTGGG...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSLRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCACAGAATGGGCTCTGCTaGGATCTAACCAGACACATT +
Preference number: 4 (lower is better)
Translates to: SWFLTCQGSFSSCRGVSAQNGLC*DLTRHI
Trigger: AATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTG...TGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCCAAAGGCAGCAACGCTACCCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGCCACAGACTGGATTGTaGGCTGTCTGGCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AKGSNATQQVAEDLSIFLPQTGL*AVWPEE
Trigger: CTCTTCTGGCCAGACAGCTCACAATCCAGTCTGTGG...CAGGAAAATACTGAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR GCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLTGRRR*RRGGGR
Trigger: TCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGT...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp GCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGATTCCCGCTGCTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARAASVPAAVSVQIDSRCFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...GCAGCGGGAATCAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCCTGCAGCCTGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLLQPAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAG...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 4 (lower is better)
Translates to: PAALLNELLTLGSELMSWQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...CCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGCTGCCGCGGTGTCAGTaGAGATTGATTCCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQLPRCQ*RLIPAA
Trigger: CGCAGCGGGAATCAATCTGCACTGACACCGCGGCAG...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTTACAGCCCCCTCACCTaGAAGCCCCGCCTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLYSPLT*KPRLSA
Trigger: TGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGCTGTA...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATTGCTTAGCCCCATTCCATaGGCCCTTACCCTTACTCAT +
Preference number: 4 (lower is better)
Translates to: VPHLPGQLQFLPRCQCRLLSPIP*ALTLTH
Trigger: ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAG...CAATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGGCAAGGCAGAAATGTAAACGACACTGCCATGCATCAAGGGACACCAGGAGCCGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GQGRNVNDTAMHQGTPGAAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...GGCTCCTGGTGTCCCTTGATGCATGGCAGTGTCGTTTACATTTCTGCCTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGACAGAACCTCACACCTaGCTGCCTGTCCGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: HLAACPVSNLLLLWVQPQTEPHT*LPVRCQ
Trigger: TTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGT...CTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELSRVHR*MEGNVF
Trigger: GAAGACATTTCCCTCCATCCACCTGTGGACCCGGCT...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLSSQSPGAPGIPVAPHFQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...AAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TCAGGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: SGLSLASLANPKACLILLAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...GAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp CTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: LSSQSPGAPGIPVAPHFLAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...AAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCGTCTGCCCGTCACCTaGCAGCCTGGTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLRLPVT*QPGGTA
Trigger: TGCAGTGCCACCAGGCTGCCAGGTGACGGGCAGACG...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: QSPGAPGIPVAPHFLCCLESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...AAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp TCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCGAGTCCTGGTGCACCTaGGATCCCAGTAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SSQSPGAPGIPVAPHFLCESWCT*DPSSST
Trigger: TGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC...GCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp TCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SQSPGAPGIPVAPHFLCCVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...GCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGCCAGGTCTTGCAGAATaGGCTCTGCTGAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVPGLAE*ALLRSN
Trigger: GTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGG...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGAGCCCACCCTCTCATCTaGCTCAGCCAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSWLTLKGMKGKGRAGLRAHPLI*LSQVLQ
Trigger: CTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGC...TCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKGWRKS*YPEQFA
Trigger: AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CCAGCAGGTAGCCGAGGATCTCAGTATTTTCCTGCAGCAGGCTCGCTAGCAGCCTTTGGATCCACAGACTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAGSRGSQYFPAAGSLAAFGSTD*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGTCTGTGGATCCAAA...GGCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGATCCTCGGCTACCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR TCA 90 bp ATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTCCTGAGACTGTCATGTaGCCCACAGTCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: IYTEPHTWLPVRCQISFSPETVM*PTVPSP
Trigger: TGGGGATGGGACTGTGGGTCACATGACAGTCTCAGG...AGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCTGCTCCCAGATGCCCTaGGACTGTCATGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLCSQMP*DCHVTH
Trigger: GTGGGTCACATGACAGTCTCAGGGCATCTGGGAGCA...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCTGCCGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PILLLQVGVDGGDLRGAAAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...GGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CAGTATCAAAATAACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATCGGGCCCGGATGACCTaGACGGGAGGGTACGACGGG +
Preference number: 4 (lower is better)
Translates to: QYQNNSQMGLLCLNTSHHRARMT*TGGYDG
Trigger: CCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCG...ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 4 (lower is better)
Translates to: VLTESWCTWDPSSSTFSLLRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...CAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR TCA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTCCGCTGGGAGAACGTaGGGGAGACTGGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQSAGRT*GRLGWF
Trigger: AAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGA...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS-3UTR GCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTACTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSDLQNE*WAYPGL
Trigger: CAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGGCTCAGCCAGGTCTTaGAGAATGGGCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSAGSARS*RMGSAE
Trigger: CTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCC...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCTTAGCCCCATTCCATaGGCCCTTACCCTTACTCAT +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSLSPIP*ALTLTH
Trigger: ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp GGGCAAGGCAGAAATGTAAACGACACTGCCATGCATCAAGGGACACCAGGAGCCGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GQGRNVNDTAMHQGTPGAAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...GGCTCCTGGTGTCCCTTGATGCATGGCAGTGTCGTTTACATTTCTGCCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACATCAGGGTGCTGGTCGTaGGCCACAATGGCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTSGCWS*ATMAEA
Trigger: TGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGA...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGTCAGGAACCAGGGTGTaGCCCGCAGCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: LEEVLVPGAVCFVFAVSVSGTRV*PAAGTQ
Trigger: CTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGA...CACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCCTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPIPCALTLTHRSIKITPLSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCTTCAGAACGAATGCTaGGCCTATCCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHLQNEC*AYPGLS
Trigger: GGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAG...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTCAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGCAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RMLGLSRSVRSTQSRSSVQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...CACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCGCCCACCCTCTCATCTaGCTCAGCCAGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIAHPLI*LSQVLQ
Trigger: CTGCAAGACCTGGCTGAGCCAGATGAGAGGGTGGGC...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLTQVGD*GVEARS
Trigger: AGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGT...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVITQVGD*GVEARS
Trigger: AGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGT...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACCCCCGGATGGTGGCTaGAGCCTTCGGGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRPPDGG*SLRDSN
Trigger: GTTGCTGTCCCGAAGGCTTCAGCCACCATCCGGGGG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSESVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp GTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VLSSQSPGAPGIPVAPHFSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...AAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR TCA 90 bp GCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AVLTESWCTWDPSSSTFSAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...AGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR TCA 90 bp CATCACACACGAAAGGAAAATAATACAAAGGGAAGAAGGCCACATGAAGGGCAAACACCCGGGCCCGGATaGCCTGAACGGGAGGGTACG +
Preference number: 4 (lower is better)
Translates to: HHTRKENNTKGRRPHEGQTPGPG*PEREGT
Trigger: CGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGT...TTGCCCTTCATGTGGCCTTCTTCCCTTTGTATTATTTTCCTTTCGTGTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR TCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCACTCCGTGATGAGCTATaGTGTAGCCCAGCCACACTC +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSALRDEL*CSPATL
Trigger: GAGTGTGGCTGGGCTACATCATAGCTCATCACGGAG...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCCATTTAGTTAGTTCCTaGAGCATACAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSHLVSS*SIQPPH
Trigger: GTGAGGGGGCTGTATGCTTCAGGAACTAACTAAATG...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCCACGGCGTCCCTTCCTaGGTATTGTCCACATTTCCT +
Preference number: 4 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLHGVPS*VLSTFP
Trigger: AGGAAATGTGGACAATACGCAGGAAGGGACGCCGTG...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCAGCAGGTACTCAGGGTaGTGGTCGTGGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLSRYSG*WSWATM
Trigger: CATTGTGGCCCACGACCAGCACCCTGAGTACCTGCT...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp ATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTAGCAGGTACTCAGGGTaGTGGTCGTGGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: MADSQGNEGKRKSGSEILSRYSG*WSWATM
Trigger: CATTGTGGCCCACGACCAGCACCCTGAGTACCTGCT...AAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp TCACTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLRCAVLTESWCTWDPSSFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: QRTPLPGWRKSWYPEQFAPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp TTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGCTCACAGAGTCCTGGTaGACCTGGGATCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEEVLVPGAVCFVFAVSVLTESW*TWDPSS
Trigger: GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG...CACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESWCTWDPSSSTFSLLPSIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...CGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLIIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTTAATCATCATCACTCAGGTGTCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSELMSWLQKVLIIITQVSWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...CACCTGAGTGATGATGATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR GCA 90 bp CGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTGGTTCCTCACTTaGCAGGGCAGCTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RSWLTLKGMKGKGRAGLRSWFLT*QGSFSS
Trigger: GGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA...TCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ALLNELLTLGSELMSWLQVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTCAAATGGGATTGCTGTaGTTGAACACCTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: PHSVTAPGSSLARAASVPQMGLL*LNTSHH
Trigger: ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTG...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGCAAATGGGATTGCTGTaGTTGAACACCTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVQMGLL*LNTSHH
Trigger: ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTG...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAACGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAG +
Preference number: 4 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQRCHTD*SGGSTQ
Trigger: CTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCG...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCGCACCAGTGAAAACCTaGATTGTGAGCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DLHRTSHLAACPVSNLLLAPVKT*IVSCLA
Trigger: GGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGC...GAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGTACTCAGGGTGCTaGTCGTGGGCCACAATGGCC +
Preference number: 4 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKRYSGC*SWATMA
Trigger: GGCCATTGTGGCCCACGACCAGCACCCTGAGTACCT...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLSSQSPGAPGIPVAPHFSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...AAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CCA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKTQVGD*GVEARS
Trigger: AGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGT...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGCCTAAGACACTCTTaGTCTACACAGAACCTCACA +
Preference number: 4 (lower is better)
Translates to: HLAACPVSNLLLLWVQPQGLRHS*STQNLT
Trigger: TGTGAGGTTCTGTGTAGATCAAGAGTGTCTTAGGCC...CTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR TCA 90 bp CTGGCTCAGCCAGGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: LAQPGLAEWALLRSNQTHSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...ATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCAGTGTGACAGTGTGGTaGGAGGCACCCAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: SQSPGAPGIPVAPHFLCCSVTVW*EAPNPN
Trigger: ATTTGGATTGGGTGCCTCTCACCACACTGTCACACT...GCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR TCA 90 bp GGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTACTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GTRSSLLCFCSVSDLTSTTPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGT...AGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 4 (lower is better)
Translates to: AALLNELLTLGSELMSWLKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 4 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTTTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTA +
Preference number: 4 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGLLSVR*AHSWNL
Trigger: TAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAA...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp ATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTA +
Preference number: 4 (lower is better)
Translates to: IPAALLNELLTLGSELMSLLSVR*AHSWNL
Trigger: TAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAA...GCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCAGAATGGGCTCTGCTaGGATCTAACCAGACACATT +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSQNGLC*DLTRHI
Trigger: AATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTTTTTGCAGTGTCAGTaGTCTCACAAGCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVFLQCQ*SHKHLV
Trigger: AACCAAGTGCTTGTGAGATCACTGACACTGCAAAAA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGCATTTAGTTAGTTCCTaGAGCATACAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKHLVSS*SIQPPH
Trigger: GTGAGGGGGCTGTATGCTTCAGGAACTAACTAAATG...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGGCTCAGCCAGGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAQPGLAEWALLRSNQTHISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...ATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR GCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRNSEVQ*RTAEGG
Trigger: ACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATT...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACTGCAGCCTGCCTGCTaGACAGGCTCGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRLQPAC*TGSMVS
Trigger: GCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAGGTGGCACTGCAGCCTaGCTGCTGCACAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRGGTAA*LLHRLD
Trigger: ATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACC...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGATCATCACTCAGGTGTaGTGTCCTCACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LTESWCTWDPSSSTFSLLIITQV*CPHRVL
Trigger: CAGGACTCTGTGAGGACAGCACACCTGAGTGATGAT...CAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 4 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCCTTAGCCCCATTCCATaGGCCCTTACCCTTACTCAT +
Preference number: 4 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVLSPIP*ALTLTH
Trigger: ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAG...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ACTCTCCACACACACCCCCTCCTTGCTGTCATACACACTAACGCTCTTCAGGAACCGACTGGTCCTGTCTaGGTTTCTGTGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: TLHTHPLLAVIHTNALQEPTGPV*VSVHIS
Trigger: TGAGATGTGCACAGAAACCCAGACAGGACCAGTCGG...TTCCTGAAGAGCGTTAGTGTGTATGACAGCAAGGAGGGGGTGTGTGTGGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp CTGCTGCACAGGCTCGATGGTCAGCTCCATGTAGCGACTGATTGCTGTCATTGTTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLHRLDGQLHVATDCCHCSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...ACAATGACAGCAATCAGTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLTESWCTWDPSSSTFSLSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...CAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp TCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: SQSPGAPGIPVAPHFLCCCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...GCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MADSQGNEGKRKSGSEILQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...AAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCCAGGTCAAAAGGGCTTaGGTGTCAGGGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLASLANPKACLILLFIQVKRA*VSGLSL
Trigger: CAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTG...GATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GAAGCAAAAGCTTCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCACTCAGTGACGGCTCCTaGTTCCTCACTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EAKASVNCDLQNECWAYPLSDGS*FLTCQG
Trigger: GCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAG...TGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGCAGGTATTCCGTTCATaGCTGACTCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELQVFRS*LTLKGM
Trigger: CATTCCCTTGAGAGTCAGCCATGAACGGAATACCTG...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGCCAGGTCTTGCAGAATaGGCTCTGCTGAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTPGLAE*ALLRSN
Trigger: GTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGG...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTACCCAAGTGGGTGACTaGGGGGTGGAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLAEWALLRSNQTHLLSVTQVGD*GVEARS
Trigger: AGACCTGGCTTCCACCCCCCAGTCACCCACTTGGGT...AACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTTCACAAGCACTTGGTTaGCCACACAGTCCTATCGAT +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSSQALG*PHSPID
Trigger: ATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGA...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGATCTCACAAGCACTTaGTTGGCCACACAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKDLTST*LATQSY
Trigger: ATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATC...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GCGGTGTCAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGATCTCACAAGCACTTaGTTGGCCACACAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: AVSVQIDSRCVTERTPDPDLTST*LATQSY
Trigger: ATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATC...AGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 4 (lower is better)
Translates to: VLSSQSPGAPGIPVAPHFSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...AAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR TCA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 4 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 4 (lower is better)
Translates to: LLNELLTLGSELMSWLQKKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GCGGTGTCAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTTTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTA +
Preference number: 4 (lower is better)
Translates to: AVSVQIDSRCVTERTPDPLLSVR*AHSWNL
Trigger: TAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAA...AGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTGACACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTATCTCAGTATTTTCCTaGAGCAGGCTCGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDLHRTSHLAACPVSNLLISVFS*SRLASS
Trigger: GCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGAT...AAGGAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR GCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp GAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCGGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ESWCTWDPSSSTFSLLPSAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...CGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGCAGATTGATTCCCGCTaGGTTACTGAACGAACTCCT +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTQIDSR*VTERTP
Trigger: AGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTG...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATATGCCTCTTACCTTCTaGATGCATTTAGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: WFLTCQGSFSSCRGVSADMPLTF*MHLVSS
Trigger: GGAACTAACTAAATGCATGCAGAAGGTAAGAGGCAT...ATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCCCGACTGGTCCTGTCTaGGTTTCTGTGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIPTGPV*VSVHIS
Trigger: TGAGATGTGCACAGAAACCCAGACAGGACCAGTCGG...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTGCACACAGTGCCGACTaGTCCTGTCTGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLAHSAD*SCLGFC
Trigger: ACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGC...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCAGCCTCCAGAGTAGCTaGGATTACAAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLSLQSS*DYKHAP
Trigger: TGGTGCATGCTTGTAATCCCAGCTACTCTGGAGGCT...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTSRVHR*MEGNVF
Trigger: GAAGACATTTCCCTCCATCCACCTGTGGACCCGGCT...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQSRVHR*MEGNVF
Trigger: GAAGACATTTCCCTCCATCCACCTGTGGACCCGGCT...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CAGTATCAAAATAACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QYQNNSQMGLLCLNTSHHGRGPQ*PRHRGG
Trigger: GCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACC...ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCATCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSASLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQGWRKS*YPEQFA
Trigger: AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTGWRKS*YPEQFA
Trigger: AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 72 bp TGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGC +
Preference number: 4 (lower is better)
Translates to: CQVGGSPGTRSS*LCFCSVSDLTS
Trigger: GCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTGCTCCATGTAGCGACTaGTTGCTGTCATTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSAPCSD*LLSLSS
Trigger: TGAGGACAATGACAGCAATCAGTCGCTACATGGAGC...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGACAGAATGGGCTCTGCTaGGATCTAACCAGACACATT +
Preference number: 4 (lower is better)
Translates to: RSWLTLKGMKGKGRAGLRQNGLC*DLTRHI
Trigger: AATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTG...TCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGTTCTTCCTCTTTCTCTaGACAGGTCAAAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTFFLFL*TGQKGL
Trigger: CAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAA...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLIPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR GCA 90 bp CTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LSSQSPGAPGIPVAPHFLAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...AAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGDLQNE*WAYPGL
Trigger: CAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGCTAACCAGACACATTTaGTATCTGTTAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMLTRHI*YLLGEL
Trigger: GAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAG...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCTAACCAGACACATTTaGTATCTGTTAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QCRLIPAALLNELLTLGSLTRHI*YLLGEL
Trigger: GAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: LNELLTLGSELMSWLQKVFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CCA 90 bp GGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: GSPGTRSSLLCFCSVSDLCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...GAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAGCTGCACAGGCTCGATaGTCAGCTCCATGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRAAQAR*SAPCSD
Trigger: GTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGC...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAGTCCTCACAGAGTCCTaGTGCACCTGGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRVLTES*CTWDPS
Trigger: ACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGAC...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTATCACAAGCACTTGGTTaGCCACACAGTCCTATCGAT +
Preference number: 4 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVSQALG*PHSPID
Trigger: ATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGA...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTGGTTGGAGGAAGTCCTaGTACCCGGAGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GLAEWALLRSNQTHLLSVGWRKS*YPEQFA
Trigger: AGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC...AACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAAACTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKTPGRS*WRRPQR
Trigger: CCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGT...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR TCA 90 bp GATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 4 (lower is better)
Translates to: DLQNECWAYPGLSAVPKVKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...GACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTATTGCTATCTGTTAGGTaGGCTCATTCCTGGAACCTA +
Preference number: 4 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVLLSVR*AHSWNL
Trigger: TAGGTTCCAGGAATGAGCTCACCTAACAGATAGCAA...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: QSPGAPGIPVAPHFLCCLPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...AAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR GCA 90 bp CAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGCTAACCAGACACATTTaGTATCTGTTAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QSRSSVMSYDVAQPHSVTLTRHI*YLLGEL
Trigger: GAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAG...CGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCTACGACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVNCDLQNECWAYPGLSAVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTTCTCTCTGGCTTCCTTaGCAAATCCTAAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLSLWLP*QILRPV
Trigger: GACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGA...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp ATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: MADSQGNEGKRKSGSEILSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...AAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGACACCCTTGCCAGGTTaGAGGAAGTCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: NEGKRKSGSEILWIIFTKTPLPG*RKSWYP
Trigger: CGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGT...CTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 4 (lower is better)
Translates to: SPIPCALTLTHRSIKITPSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCGTACCCGGAGCAGTTTaGTTTGTTTTTGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: EEVLVPGAVCFVFAVSVIVPGAV*FVFAVS
Trigger: TGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC...GATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCAAATGGGATTGCTGTaGTTGAACACCTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGQMGLL*LNTSHH
Trigger: ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTG...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATCTTAGCCCCATTCCATaGGCCCTTACCCTTACTCAT +
Preference number: 4 (lower is better)
Translates to: PCALTLTHRSIKITPKWDLSPIP*ALTLTH
Trigger: ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAG...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCCTGAGGCAGGAGAATTaGTTGAAATTGGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LSLASLANPKACLILLFILRQEN*LKLGGE
Trigger: TTCACCTCCCAATTTCAAGCAATTCTCCTGCCTCAG...GATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp ACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: TWLPVRCQISFSYGFSLRFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...CCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CCA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: LIPAALLNELLTLGSELMFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp TGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: CRLIPAALLNELLTLGSEFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...CTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp GGGCAAGGCAGAAATGTAAACGACACTGCCATGCATCAAGGGACACCAGGAGCCTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: GQGRNVNDTAMHQGTPGAFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...GGCTCCTGGTGTCCCTTGATGCATGGCAGTGTCGTTTACATTTCTGCCTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGTTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: RLIPAALLNELLTLGSELFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATTGTCAGGGCTCTCTCTaGCTTCCTTGGCAAATCCTA +
Preference number: 4 (lower is better)
Translates to: PCALTLTHRSIKITPKWDCQGSL*LPWQIL
Trigger: TAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACA...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAATCTGAGCTGATGAGCTaGCTCCAGAAGGTGTTAATC +
Preference number: 4 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKSELMS*LQKVLI
Trigger: GATTAACACCTTCTGGAGCCAGCTCATCAGCTCAGA...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTAGCTTCTGTGAACTGTaGTCTTCAGAACGAATGCTG +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLSFCEL*SSERML
Trigger: CAGCATTCGTTCTGAAGATCACAGTTCACAGAAGCT...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp TTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 4 (lower is better)
Translates to: LEEVLVPGAVCFVFAVSVKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...CACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTTTTTTGCAGTGTCAGTaGTCTCACAAGCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGFLQCQ*SHKHLV
Trigger: AACCAAGTGCTTGTGAGATCACTGACACTGCAAAAA...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTCATTTAGTTAGTTCCTaGAGCATACAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VPGAVCFVFAVSVISQALHLVSS*SIQPPH
Trigger: GTGAGGGGGCTGTATGCTTCAGGAACTAACTAAATG...AAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSPHFLC*LRGSHL
Trigger: AAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGG...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTCTAACCAGACACATTTaGTATCTGTTAGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGLTRHI*YLLGEL
Trigger: GAGCTCACCTAACAGATAGCAAATGTGTCTGGTTAG...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAACAAATGGGATTGCTGTaGTTGAACACCTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQQMGLL*LNTSHH
Trigger: ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTG...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCAAACCGACTGGTCCTGTCTaGGTTTCTGTGCACATCTCA +
Preference number: 4 (lower is better)
Translates to: KGKGRAGLRSFGLSLRSKPTGPV*VSVHIS
Trigger: TGAGATGTGCACAGAAACCCAGACAGGACCAGTCGG...TTTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATTCACAAGCACTTGGTTaGCCACACAGTCCTATCGAT +
Preference number: 4 (lower is better)
Translates to: PCALTLTHRSIKITPKWDSQALG*PHSPID
Trigger: ATCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGA...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGATCTCACAAGCACTTaGTTGGCCACACAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PCALTLTHRSIKITPKWDDLTST*LATQSY
Trigger: ATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTAAGCAAAAGCTTCTGTaGACTGTGATCTTCAGAACG +
Preference number: 4 (lower is better)
Translates to: GTRSSLLCFCSVSDLTSTKQKLL*TVIFRT
Trigger: CGTTCTGAAGATCACAGTTCACAGAAGCTTTTGCTT...AGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTAAGGAAGAGCGGGTCTaGGATCCTTTGGATTATCTT +
Preference number: 4 (lower is better)
Translates to: GLAEWALLRSNQTHLLSVKEERV*DPLDYL
Trigger: AAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTT...AACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTTTTTTGCAGTGTCAGTaGTCTCACAAGCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLFLQCQ*SHKHLV
Trigger: AACCAAGTGCTTGTGAGATCACTGACACTGCAAAAA...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACATTTAGTTAGTTCCTaGAGCATACAGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRHLVSS*SIQPPH
Trigger: GTGAGGGGGCTGTATGCTTCAGGAACTAACTAAATG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: VPGAVCFVFAVSVISQALAPHFL*CLRGSH
Trigger: ATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGC...AAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp AATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGGATCTTCAGAACGAATaGTGGGCCTATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NEGKRKSGSEILWIIFTKDLQNE*WAYPGL
Trigger: CAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATC...CTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTGGGTCTGAGATCCTTTaGATTATCTTTACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGGSEIL*IIFTKQ
Trigger: TTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCC...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp CAGTATCAAAATAACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATCCAGGTCTTGCAGAATaGGCTCTGCTGAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: QYQNNSQMGLLCLNTSHHPGLAE*ALLRSN
Trigger: GTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGG...ATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTTATTTTGATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAGATCTCACAAGCACTTaGTTGGCCACACAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRDLTST*LATQSY
Trigger: ATAGGACTGTGTGGCCAACCAAGTGCTTGTGAGATC...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR TCA 90 bp CATCACACACGAAAGGAAAATAATACAAAGGGAAGAAGGCCACATGAAGGGCAAGGCAGGAGAATTGCTTaGAATTGGGAGGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: HHTRKENNTKGRRPHEGQGRRIA*NWEVKV
Trigger: AACCTTCACCTCCCAATTTCAAGCAATTCTCCTGCC...TTGCCCTTCATGTGGCCTTCTTCCCTTTGTATTATTTTCCTTTCGTGTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR GCA 90 bp GTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAATGCCTCTTACCTTCTaGATGCATTTAGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLVPGAVCFVFAVSVISQMPLTF*MHLVSS
Trigger: GGAACTAACTAAATGCATGCAGAAGGTAAGAGGCAT...TTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp GGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTATGCCTCTTACCTTCTaGATGCATTTAGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GTRSSLLCFCSVSDLTSTMPLTF*MHLVSS
Trigger: GGAACTAACTAAATGCATGCAGAAGGTAAGAGGCAT...AGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR GCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAATGCCTCTTACCTTCTaGATGCATTTAGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTMPLTF*MHLVSS
Trigger: GGAACTAACTAAATGCATGCAGAAGGTAAGAGGCAT...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CCA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACATTTGGATCCACAGACTaGGAAGAGAATGAACATAAA +
Preference number: 4 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTFGSTD*EENEHK
Trigger: TTTATGTTCATTCTCTTCCCAGTCTGTGGATCCAAA...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CCA 90 bp GTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCACTTGGGTCTGAGATCCTTTaGATTATCTTTACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VPGAVCFVFAVSVISQALGSEIL*IIFTKQ
Trigger: TTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCC...AAGTGCTTGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
3UTR CAA 72 bp CTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAAAGGAAAATAATACAA +
Preference number: 4 (lower is better)
Translates to: LASLANPKACLI*LFITHERKIIQ
Trigger: TTGTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CCA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAGGGTCTGAGATCCTTTaGATTATCTTTACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRGSEIL*IIFTKQ
Trigger: TTGCTTCGTAAAGATAATCCAAAGGATCTCAGACCC...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS CCA 90 bp GTGTGGCCCGCAGCAGGTACTCAGGGTGCTGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGCCAGCCAGGGCCGACAGGAGCCGGG +
Preference number: 5 (lower is better)
Translates to: VWPAAGTQGAGRGPQ*PRHRGGQPGPTGAG
Trigger: CCCGGCTCCTGTCGGCCCTGGCTGGCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGAGTACCTGCTGCGGGCCACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS CCA 90 bp CGAGGTCCAGTGCCGCACGGCCGAGGGAGGTCAGGAACCAGGGTGTaGCCCGCAGCAGGTACTCAGGGTGCTGGTCGTGGGCCACAATGG +
Preference number: 5 (lower is better)
Translates to: RGPVPHGRGRSGTRV*PAAGTQGAGRGPQW
Trigger: CCATTGTGGCCCACGACCAGCACCCTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGACCTCCCTCGGCCGTGCGGCACTGGACCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS GCA 90 bp CGGCGATCCAGCAGGAGGAGGCGCAGATCCACAGGCCGAAGGAGATaGAGACGCGGTGGCGGGCGAAGCAGCGGTCCAGGTAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: RRSSRRRRRSTGRRR*RRGGGRSSGPGSPS
Trigger: ACTGGGACTACCTGGACCGCTGCTTCGCCCGCCACCGCGTCTGCATCTCCTTCGGCCTGTGGATCTGCGCCTCCTCCTGCTGGATCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000430601.1
ENST00000473092.5
CDS CCA 90 bp GGCTGGGCGGGAGAAGCAGCAGATCACAAGACCCAGGGCCCTCAGTaGCACAGCAGGTTGCGGGGCAAGCCCTCTGCCTGCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GWAGEAADHKTQGPQ*HSRLRGKPSACSQS
Trigger: GGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTGAGGGCCCTGGGTCTTGTGATCTGCTGCTTCTCCCGCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS-3UTR CAA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: APSPASPASAHTLARLEEPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS CCA 90 bp AGAGGAGGCCAGCCAGGGCCGACAGGAGCCGGGTCCACAGGTGGATaGAGGGAAATGTCTTCCCCCGGCACATCTCAGTGCCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: RGGQPGPTGAGSTGG*REMSSPGTSQCPAP
Trigger: AGGTGCTGGGCACTGAGATGTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 90 bp TCCACAGGTGGATGGAGGGAAATGTCTTCCCCCGGCACATCTCAGTaGCCAGCACCTGACGCTGGGCAGCGGCTCGCCAATGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: STGGWREMSSPGTSQ*PAPDAGQRLANVRW
Trigger: CCAGCGGACATTGGCGAGCCGCTGCCCAGCGTCAGGTGCTGGGCACTGAGATGTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 90 bp AAGCAGCAGATCACAAGACCCAGGGCCCTCAGTGGCACAGCAGGTTaGGGGGCAAGCCCTCTGCCTGCAGCCAGTCCTCCAGGGCAATGC +
Preference number: 5 (lower is better)
Translates to: KQQITRPRALSGTAG*GASPLPAASPPGQC
Trigger: GCATTGCCCTGGAGGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTGAGGGCCCTGGGTCTTGTGATCTGCTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS-3UTR CAA 90 bp GGAGCTGCCGGAAGACACCCGGGCCCGGATGACCTGAACGGGAGGGTACGACGGACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GAAGRHPGPDDLNGRVRRTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...CCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCGGGTGTCTTCCGGCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS TCA 90 bp ATGGAGGGAAATGTCTTCCCCCGGCACATCTCAGTGCCCAGCACCTaGCGCTGGGCAGCGGCTCGCCAATGTCCGCTGGGAGAACGTGAG +
Preference number: 5 (lower is better)
Translates to: MEGNVFPRHISVPST*RWAAARQCPLGERE
Trigger: CTCACGTTCTCCCAGCGGACATTGGCGAGCCGCTGCCCAGCGTCAGGTGCTGGGCACTGAGATGTGCCGGGGGAAGACATTTCCCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS CCA 90 bp CAGTGCCCAGCACCTGACGCTGGGCAGCGGCTCGCCAATGTCCGCTaGGAGAACGTGAGGGAGACTGGGATGGTTTGGACATTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: QCPAPDAGQRLANVR*ENVRETGMVWTFVP
Trigger: GGGGACAAATGTCCAAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGACATTGGCGAGCCGCTGCCCAGCGTCAGGTGCTGGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS-3UTR CAA 90 bp GCCCCCTCACCTGCAAGCCCCGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAACGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 5 (lower is better)
Translates to: APSPASPASAHTLARLEERCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...TTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCGGGGCTTGCAGGTGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS TCA 90 bp CACCTGACGCTGGGCAGCGGCTCGCCAATGTCCGCTGGGAGAACGTaGGGGAGACTGGGATGGTTTGGACATTTGTCCCCGCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: HLTLGSGSPMSAGRT*GRLGWFGHLSPPDL
Trigger: GAGATCTGGCGGGGACAAATGTCCAAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGACATTGGCGAGCCGCTGCCCAGCGTCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 90 bp CCACACAGGTACACCCACACATGGGCATGCGTGCACACACCCACATaGACACGCACACCCACACAGGACTGCACTGGCTCCAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: PHRYTHTWACVHTPT*TRTPTQDCTGSRHR
Trigger: CCTGTGCCTGGAGCCAGTGCAGTCCTGTGTGGGTGTGCGTGTGCATGTGGGTGTGTGCACGCATGCCCATGTGTGGGTGTACCTGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS GCA 90 bp GACCCAGGGCCCTCAGTGGCACAGCAGGTTGCGGGGCAAGCCCTCTaGCTGCAGCCAGTCCTCCAGGGCAATGCTTCTGTTAGACTTACA +
Preference number: 5 (lower is better)
Translates to: DPGPSVAQQVAGQAL*LQPVLQGNASVRLT
Trigger: TGTAAGTCTAACAGAAGCATTGCCCTGGAGGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTGAGGGCCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS-3UTR CAA 90 bp TGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCACACACACCCCCTCCTaGCTGTCATACACACTAACG +
Preference number: 5 (lower is better)
Translates to: WGRTHGLSPRGSRRPQDATHTPS*LSYTLT
Trigger: CGTTAGTGTGTATGACAGCAAGGAGGGGGTGTGTGT...GGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS GCA 90 bp CAGGGCCCTCAGTGGCACAGCAGGTTGCGGGGCAAGCCCTCTGCCTaGAGCCAGTCCTCCAGGGCAATGCTTCTGTTAGACTTACAGCTT +
Preference number: 5 (lower is better)
Translates to: QGPQWHSRLRGKPSA*SQSSRAMLLLDLQL
Trigger: AAGCTGTAAGTCTAACAGAAGCATTGCCCTGGAGGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTGAGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS-3UTR CAA 90 bp TGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGACGCCCGGCCTAAGACACTCTaGATCTACACAGAACCTCAC +
Preference number: 5 (lower is better)
Translates to: WGRTHGLSPRGSRRPQDARPKTL*IYTEPH
Trigger: GTGAGGTTCTGTGTAGATCAAGAGTGTCTTAGGCCG...GGCGTCCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CAA 90 bp CTGGGCCTATCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCCCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LGLSRSVRSTQSRSSVMSPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...GCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGATAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GGAAATGGGGAAGAACACACGGGCTTTCCCCGAGAGGCTCCCGCCGTCCTCAGGGTCCCTTCCTGCGTATaGTCCACATTTCCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: GNGEEHTGFPREAPAVLRVPSCV*STFPEP
Trigger: TGGCTCAGGAAATGTGGACAATACGCAGGAAGGGAC...CCTGAGGACGGCGGGAGCCTCTCGGGGAAAGCCCGTGTGTTCTTCCCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CAA 90 bp CTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGGTGCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: LNELLTLGSELMSWLQKVHTLAR*EEVLVP
Trigger: GGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG...CACCTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CACTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: HSGVLSSQSPGAPGIPVAHTLAR*EEVLVP
Trigger: GGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG...AGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS GCA 90 bp ACTGTTCTCATGGCCCACACAGGTACACCCACACATGGGCATGCGTaGACACACCCACATGCACACGCACACCCACACAGGACTGCACTG +
Preference number: 5 (lower is better)
Translates to: TVLMAHTGTPTHGHA*THPHAHAHPHRTAL
Trigger: CAGTGCAGTCCTGTGTGGGTGTGCGTGTGCATGTGGGTGTGTGCACGCATGCCCATGTGTGGGTGTACCTGTGTGGGCCATGAGAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp CGCCTCAGCGCACACCCTTGCCAGGTTGGAGGAAGTCCTGGTACCCGGAGCAGTAACTCCCAAATGGGATaGCTGTGCTTGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: RLSAHPCQVGGSPGTRSSNSQMG*LCLNTS
Trigger: GGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT...ACTGCTCCGGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp GACGGTGTCACACAGACTGGTCAGGAGGCAGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGGTTTCTGTGCACATCTCAGATAGAG +
Preference number: 5 (lower is better)
Translates to: DGVTQTGQEAARSTQ*RLVLSGFLCTSQIE
Trigger: CTCTATCTGAGATGTGCACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330115.3
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000419280.5
ENST00000430601.1
ENST00000473092.5
ENST00000494894.5
CDS GCA 90 bp GCATGCGTGCACACACCCACATGCACACGCACACCCACACAGGACTaGACTGGCTCCAGGCACAGGCGTTCTTCACTATGCAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: ACVHTPTCTRTPTQD*TGSRHRRSSLCRLC
Trigger: ACAAAGTCTGCATAGTGAAGAACGCCTGTGCCTGGAGCCAGTGCAGTCCTGTGTGGGTGTGCGTGTGCATGTGGGTGTGTGCACGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp ACTCTCCACACACACCCCCTCCTTGCTGTCATACACACTAACGCTCTTCAGGAATCAGGACGCCCTGGGTaGGCTGCCCACTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: TLHTHPLLAVIHTNALQESGRPG*AAHSPH
Trigger: GTGTGGAGAGTGGGCAGCCAACCCAGGGCGTCCTGA...TTCCTGAAGAGCGTTAGTGTGTATGACAGCAAGGAGGGGGTGTGTGTGGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CAA 90 bp TCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCAACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SGVLSSQSPGAPGIPVAPTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...TGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ALLNELLTLGSELMSWLQTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CAA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: LIPAALLNELLTLGSELMHTLAR*EEVLVP
Trigger: GGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACATCTTCAGGGTCCCACTCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: QSPGAPGIPVAPHFL*CLRGSHLQGPTPGR
Trigger: CCGACCTGGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000477651.5
CDS CCA 90 bp CGTGCACACACCCACATGCACACGCACACCCACACAGGACTGCACTaGCTCCAGGCACAGGCGTTCTTCACTATGCAGACTTTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RAHTHMHTHTHTGLH*LQAQAFFTMQTLFQ
Trigger: TTGGAACAAAGTCTGCATAGTGAAGAACGCCTGTGCCTGGAGCCAGTGCAGTCCTGTGTGGGTGTGCGTGTGCATGTGGGTGTGTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp TCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCCGGATGGTGGCTGAACGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: SCSRLASSLRCGPRMVAERSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...TTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CAA 90 bp TGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: WFLTCQGSFSSCRGVSADLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...ATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CCACACTCAGTGACGGCTCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PHSVTAPGSSLARAASVPLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...AGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGAGCCGTCACTGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TCACTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SLRCAVLTESWCTWDPSSLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...GCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: ALLNELLTLGSELMSWLQLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CAA 90 bp TGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATCTCACAAGCACTTGGTaGGCCACACAGTCCTATCGA +
Preference number: 5 (lower is better)
Translates to: WFLTCQGSFSSCRGVSADLTSTW*ATQSYR
Trigger: TCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAG...ATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TCCTGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SWFLTCQGSFSSCRGVSAGTRSS*LCFCSV
Trigger: GACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC...TGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCATGGGATTGCTGTGCTaGAACACCTCCCATCATGCC +
Preference number: 5 (lower is better)
Translates to: AALLNELLTLGSELMSWLMGLLC*NTSHHA
Trigger: GGCATGATGGGAGGTGTTCAAGCACAGCAATCCCAT...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTCCAGGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: SPGAPGIPVAPHFLC*LRGSHLQGPTPGRS
Trigger: ACTCCGACCTGGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000477651.5
CDS GCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACATCTTCAGGGTCCCACTGCTCCGAGT +
Preference number: 5 (lower is better)
Translates to: QSPGAPGIPVAPHFL*CLRGSHLQGPTAPS
Trigger: ACTCGGAGCAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432352.5
ENST00000473092.5
CDS GCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTCAGAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPGAPGIPVAPHFLC*LRGSHLQGPTQRSC
Trigger: GCAGCTCCTCTGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429560.1
CDS GCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACATCTTCAGGGTCCCACTCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: QSPGAPGIPVAPHFL*CLRGSHLQGPTQRS
Trigger: GCTCCTCTGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429560.1
CDS-3UTR CAA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLITGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QCRLIPAALLNELLTLGSTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp TGGTTCCTCACTTGCCAGGGCAGCTTCAGTTCCTGCCGCGGTGTCAGTGCAGATATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: WFLTCQGSFSSCRGVSADIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...ATCTGCACTGACACCGCGGCAGGAACTGAAGCTGCCCTGGCAAGTGAGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: ALLNELLTLGSELMSWLQIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CAA 90 bp CTCAGGTGTGCTGTCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LRCAVLTESWCTWDPSSSSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...GGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 5 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTCGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 5 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AGCTCCGTGATGAGCTATGATGTAGCCCAGCCACACTCAGTGACGGCTCCTGGTCTCACAAGCACTTGGTaGGCCACACAGTCCTATCGA +
Preference number: 5 (lower is better)
Translates to: SSVMSYDVAQPHSVTAPGLTSTW*ATQSYR
Trigger: TCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAG...ACCAGGAGCCGTCACTGAGTGTGGCTGGGCTACATCATAGCTCATCACGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGCACACCCTTGCCAGGTaGGAGGAAGTCCTGGTACCC +
Preference number: 5 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQHTLAR*EEVLVP
Trigger: GGGTACCAGGACTTCCTCCAACCTGGCAAGGGTGTG...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAA +
Preference number: 5 (lower is better)
Translates to: AALLNELLTLGSELMSWLKACLI*LFITHE
Trigger: TTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT...GAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: QCRLIPAALLNELLTLGSLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp GCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: ALLNELLTLGSELMSWLQSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...CTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CAA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTCTCACAAGCACTTGGTaGGCCACACAGTCCTATCGA +
Preference number: 5 (lower is better)
Translates to: QCRLIPAALLNELLTLGSLTSTW*ATQSYR
Trigger: TCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAG...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGATGGGATTGCTGTGCTaGAACACCTCCCATCATGCC +
Preference number: 5 (lower is better)
Translates to: LIPAALLNELLTLGSELMMGLLC*NTSHHA
Trigger: GGCATGATGGGAGGTGTTCAAGCACAGCAATCCCAT...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTGCTCCGAGTTTA +
Preference number: 5 (lower is better)
Translates to: SPGAPGIPVAPHFLC*LRGSHLQGPTAPSL
Trigger: TAAACTCGGAGCAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432352.5
ENST00000473092.5
CDS GCA 90 bp AGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTTTGAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SPGAPGIPVAPHFLC*LRGSHLQGPTLRFQ
Trigger: CTGGAACCTCAAAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS GCA 90 bp CAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACATCTTCAGGGTCCCACTTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: QSPGAPGIPVAPHFL*CLRGSHLQGPTLRF
Trigger: GAACCTCAAAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS-3UTR CAA 90 bp GCCTCCCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAA +
Preference number: 5 (lower is better)
Translates to: ASQYFCSRSELMEETSEEKACLI*LFITHE
Trigger: TTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT...CTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CAA 90 bp TCCTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SSQSPGAPGIPVAPHFLCLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...GCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp GGTTGGAGGAAGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GWRKSWYPEQFALFLQCQTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...CTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACTTCCTCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp ATTCACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: IHPSVHSHLSPIPCALTLIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...AAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: RLIPAALLNELLTLGSELIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...CAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp ACCCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: TPVFTPTLAPFHAPLPLLSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...GAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp ACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGCCTATGGGATTGCTGTGCTaGAACACCTCCCATCATGCC +
Preference number: 5 (lower is better)
Translates to: TESWCTWDPSSSTFSLLPMGLLC*NTSHHA
Trigger: GGCATGATGGGAGGTGTTCAAGCACAGCAATCCCAT...AGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381975.7
CDS-3UTR CAA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAACTCCCAAATGGGATaGCTGTGCTTGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: LIPAALLNELLTLGSELMNSQMG*LCLNTS
Trigger: GGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp CCCACACAGGACTGCACTGGCTCCAGGCACAGGCGTTCTTCACTATaGAGACTTTGTTCCAATGACAGAAACAGCCTCCTTGCAGAATTC +
Preference number: 5 (lower is better)
Translates to: PTQDCTGSRHRRSSL*RLCSNDRNSLLAEF
Trigger: GAATTCTGCAAGGAGGCTGTTTCTGTCATTGGAACAAAGTCTGCATAGTGAAGAACGCCTGTGCCTGGAGCCAGTGCAGTCCTGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 90 bp TCAGGGTCCCACTTTGAGGTTCCAGCCATGGAGGCAAGTAGGGATTaGGCTCCAGTTCTCCTCCTGTCACTAATTTGCCTTCGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SGSHFEVPAMEASRD*APVLLLSLICLRFW
Trigger: CCAAAAACGAAGGCAAATTAGTGACAGGAGGAGAACTGGAGCCCAATCCCTACTTGCCTCCATGGCTGGAACCTCAAAGTGGGACCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS-3UTR CAA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAA +
Preference number: 5 (lower is better)
Translates to: QCRLIPAALLNELLTLGSKACLI*LFITHE
Trigger: TTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp CTCACAGAGTCCTGGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTGATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LTESWCTWDPSSSTFSLLIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...CAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381975.7
ENST00000429560.1
CDS-3UTR CAA 90 bp CCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATCAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: PVFTPTLAPFHAPLPLLISSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...GATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CAGTGCAGATTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: QCRLIPAALLNELLTLGSSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...AGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAATCTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
CDS-3UTR CAA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GGGCAAGGCAGAAATGTAAACGACACTGCCATGCATCAAGGGACACCAGGAGCCAGGCAGGAGAATTGCTaGAAATTGGGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GQGRNVNDTAMHQGTPGARQENC*KLGGEG
Trigger: ACCTTCACCTCCCAATTTCAAGCAATTCTCCTGCCT...GGCTCCTGGTGTCCCTTGATGCATGGCAGTGTCGTTTACATTTCTGCCTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CAA 90 bp AGGATCTCAGTATTTTCCTGCAGCAGGCTCGCTAGCAGCCTCCGCTGTGGCCCCGAATTAGACTTGAATTaGGATCCACAGACTGGATTG +
Preference number: 5 (lower is better)
Translates to: RISVFSCSRLASSLRCGPELDLN*DPQTGL
Trigger: CAATCCAGTCTGTGGATCCAAATTCAAGTCTAATTC...GGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGAAAATACTGAGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430601.1
CDS-3UTR CAA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVNCDLQNECWAYPGLSAIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CTGGCTCAGCCAGGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LAQPGLAEWALLRSNQTHSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...ATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACCTGGCTGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TCCAGGTCTGTCCGCAGTACCCAAAGTCGTAGCTCCGTGATGAGCTATGATGTAGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SRSVRSTQSRSSVMSYDVGTRSS*LCFCSV
Trigger: GACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC...TACATCATAGCTCATCACGGAGCTACGACTTTGGGTACTGCGGACAGACCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCCTCAGCGCACACCCTaGCCAGGTTGGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NEGKRKSGSEILWIIFTKPQRTP*PGWRKS
Trigger: GGACTTCCTCCAACCTGGCAAGGGTGTGCGCTGAGG...CTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS CCA 90 bp AGAGCCTTAGGCACAGAATTAATAGGAACACACGGGCCTGGGACTTaGCCCTCTTCAGACAGAGCAATCTGGCATTTAGCACTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RALGTELIGTHGPGT*PSSDRAIWHLALFS
Trigger: TGAGAACAGTGCTAAATGCCAGATTGCTCTGTCTGAAGAGGGCCAAGTCCCAGGCCCGTGTGTTCCTATTAATTCTGTGCCTAAGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp ACCTGGCTGCCTGTCCGGTGTCAAATCTCCTTCTCTTATGGGTTCAGCCTCAGGGAATTAGACTTGAATTaGGATCCACAGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: TWLPVRCQISFSYGFSLRELDLN*DPQTGK
Trigger: CTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTC...CCTGAGGCTGAACCCATAAGAGAAGGAGATTTGACACCGGACAGGCAGCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CAA 90 bp CCCAGTGTTCACTCCCACCTTAGCCCCATTCCATGCGCCCTTACCCTTACTCATGAATTAGACTTGAATTaGGATCCACAGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PSVHSHLSPIPCALTLTHELDLN*DPQTGK
Trigger: CTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTC...ATGAGTAAGGGTAAGGGCGCATGGAATGGGGCTAAGGTGGGAGTGAACACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CAA 90 bp GCCTCCCAATACTTCTGCTCCAGGTCGGAGTTGATGGAGGAGACCTCAGAGGAGCGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: ASQYFCSRSELMEETSEERSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...CTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGCAGAAGTATTGGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CAA 90 bp TCCTTGGCAAATCCTAAGGCCTGTCTCATCTTGCTCTTCATCACACACGAAAGGCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SLANPKACLILLFITHERLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...CCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CAA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACACTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTLSLAS*ANPKAC
Trigger: ACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAG...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GGTCTTGCAGAATGGGCTCTGCTGAGATCTAACCAGACACATTTGCTATCTGTTACAGGTCAAAAGGGCTaGGGTGTCAGGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GLAEWALLRSNQTHLLSVTGQKG*GVRALS
Trigger: AGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGT...AACAGATAGCAAATGTGTCTGGTTAGATCTCAGCAGAGCCCATTCTGCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp CTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTCTATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LPNGIAVLEHLPSCLLPSIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...AGAAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAAGGAAGAGCGGGTGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: VFRSWLTLKGMKGKGRAGGTRSS*LCFCSV
Trigger: GACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC...ACCCGCTCTTCCTTTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AGCCCCATTCCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCGGTACCCGGAGCAGTTaGCTTTGTTTTTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SPIPCALTLTHRSIKITPGTRSS*LCFCSV
Trigger: GACACTGCAAAAACAAAGCAAACTGCTCCGGGTACC...GGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGGAATGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TGGAACCTAGCAGGTATTCCGTTCATGGCTGACTCTCAAGGGAATGAAGGGAAAATGGGATTGCTGTGCTaGAACACCTCCCATCATGCC +
Preference number: 5 (lower is better)
Translates to: WNLAGIPFMADSQGNEGKMGLLC*NTSHHA
Trigger: GGCATGATGGGAGGTGTTCAAGCACAGCAATCCCAT...TTTCCCTTCATTCCCTTGAGAGTCAGCCATGAACGGAATACCTGCTAGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS CCA 90 bp GTTATCAAGAGCCTTAGGCACAGAATTAATAGGAACACACGGGCCTaGGACTTGGCCCTCTTCAGACAGAGCAATCTGGCATTTAGCACT +
Preference number: 5 (lower is better)
Translates to: VIKSLRHRINRNTRA*DLALFRQSNLAFST
Trigger: AGTGCTAAATGCCAGATTGCTCTGTCTGAAGAGGGCCAAGTCCCAGGCCCGTGTGTTCCTATTAATTCTGTGCCTAAGGCTCTTGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp TTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGAGCTGGCTCCAGAAGCGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: LLNELLTLGSELMSWLQKRSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...CTTCTGGAGCCAGCTCATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000473092.5
CDS-3UTR CAA 90 bp TTGATTCCCGCTGCGTTACTGAACGAACTCCTGACCCTGGGCTCTGAGCTGATGCGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: LIPAALLNELLTLGSELMRSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...CATCAGCTCAGAGCCCAGGGTCAGGAGTTCGTTCAGTAACGCAGCGGGAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
CDS-3UTR CAA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACGGTGTCAGTGCAGATaGATTCCCGCTGCGTTACTG +
Preference number: 5 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRRCQCR*IPAALL
Trigger: CAGTAACGCAGCGGGAATCAATCTGCACTGACACCG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AACTCCCAAATGGGATTGCTGTGCTTGAACACCTCCCATCATGCCTCTTACCTTAACTCCCAAATGGGATaGCTGTGCTTGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: NSQMGLLCLNTSHHASYLNSQMG*LCLNTS
Trigger: GGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT...AAGGTAAGAGGCATGATGGGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAACTCCCAAATGGGATaGCTGTGCTTGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTNSQMG*LCLNTS
Trigger: GGAGGTGTTCAAGCACAGCAATCCCATTTGGGAGTT...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp TCTGTGAACTGTGATCTTCAGAACGAATGCTGGGCCTATCCAGGTCTGTCCGCAGAATTAGACTTGAATTaGGATCCACAGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SVNCDLQNECWAYPGLSAELDLN*DPQTGK
Trigger: CTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTC...TGCGGACAGACCTGGATAGGCCCAGCATTCGTTCTGAAGATCACAGTTCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS-3UTR CAA 90 bp AGTCCTGGTACCCGGAGCAGTTTGCTTTGTTTTTGCAGTGTCAGTGATCTCACAAGCTCCACATTTTCTTaGCTGCCTTCGAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: SPGTRSSLLCFCSVSDLTSSTFS*LPSRFT
Trigger: TGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCT...TGTGAGATCACTGACACTGCAAAAACAAAGCAAACTGCTCCGGGTACCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS-3UTR CAA 90 bp GGAATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGACTCACAAGCACTTGGTaGGCCACACAGTCCTATCGA +
Preference number: 5 (lower is better)
Translates to: GMKGKGRAGLRSFGLSLRLTSTW*ATQSYR
Trigger: TCGATAGGACTGTGTGGCCAACCAAGTGCTTGTGAG...TCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS TCA 90 bp TGGCTCCAGGCACAGGCGTTCTTCACTATGCAGACTTTGTTCCAATaGCAGAAACAGCCTCCTTGCAGAATTCCTATAAAGCTTATACCC +
Preference number: 5 (lower is better)
Translates to: WLQAQAFFTMQTLFQ*QKQPPCRIPIKLIP
Trigger: GGGTATAAGCTTTATAGGAATTCTGCAAGGAGGCTGTTTCTGTCATTGGAACAAAGTCTGCATAGTGAAGAACGCCTGTGCCTGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 90 bp CCCTTATCTGCTGGTGCCAGAAAGTTTGGAGAGAGAACAAGCAGTTaGGTTATCAAGAGCCTTAGGCACAGAATTAATAGGAACACACGG +
Preference number: 5 (lower is better)
Translates to: PLSAGARKFGERTSS*VIKSLRHRINRNTR
Trigger: CCGTGTGTTCCTATTAATTCTGTGCCTAAGGCTCTTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 90 bp GGCTTTAAAAAGGGCAGACATCCAGGGGAATATGCCCTTATCTGCTaGTGCCAGAAAGTTTGGAGAGAGAACAAGCAGTTGGGTTATCAA +
Preference number: 5 (lower is better)
Translates to: GFKKGRHPGEYALIC*CQKVWRENKQLGYQ
Trigger: TTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTGCCCTTTTTAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp ACTCTTGATCTACACAGAACCTCACACCTGGCTGCCTGTCCGGTGTCAAATCTCCGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: TLDLHRTSHLAACPVSNLRSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...GAGATTTGACACCGGACAGGCAGCCAGGTGTGAGGTTCTGTGTAGATCAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330115.3
CDS-3UTR CAA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAA +
Preference number: 5 (lower is better)
Translates to: PCALTLTHRSIKITPKWDKACLI*LFITHE
Trigger: TTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
CDS GCA 90 bp TTTAAAAAGGGCAGACATCCAGGGGAATATGCCCTTATCTGCTGGTaGCAGAAAGTTTGGAGAGAGAACAAGCAGTTGGGTTATCAAGAG +
Preference number: 5 (lower is better)
Translates to: FKKGRHPGEYALICW*QKVWRENKQLGYQE
Trigger: CTCTTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTGCCCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS GCA 90 bp TTTGGCTTTAAAAAGGGCAGACATCCAGGGGAATATGCCCTTATCTaGTGGTGCCAGAAAGTTTGGAGAGAGAACAAGCAGTTGGGTTAT +
Preference number: 5 (lower is better)
Translates to: FGFKKGRHPGEYALI*WCQKVWRENKQLGY
Trigger: ATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTGCCCTTTTTAAAGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp ATCACACACGAAAGGAAAATAATACAAAGGGAAGAAGGCCACATGAAGGGCAAGATTGTCCTCAGTGACTaGCAGTGTGACAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: ITHERKIIQREEGHMKGKIVLSD*QCDSVV
Trigger: CACCACACTGTCACACTGCAAGTCACTGAGGACAAT...CTTGCCCTTCATGTGGCCTTCTTCCCTTTGTATTATTTTCCTTTCGTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS-3UTR CAA 90 bp CCATGCGCCCTTACCCTTACTCATCGCAGTATCAAAATAACTCCCAAATGGGATGAATTAGACTTGAATTaGGATCCACAGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PCALTLTHRSIKITPKWDELDLN*DPQTGK
Trigger: CTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTC...ATCCCATTTGGGAGTTATTTTGATACTGCGATGAGTAAGGGTAAGGGCGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS CCA 90 bp CCTTGCAGAATTCCTATAAAGCTTATACCCCGTCTCTTGCAATGCTaGGAAGCACAGAAGGGAAAAATTGACTGGATGCTGTCTATAAAT +
Preference number: 5 (lower is better)
Translates to: PCRIPIKLIPRLLQC*EAQKGKIDWMLSIN
Trigger: ATTTATAGACAGCATCCAGTCAATTTTTCCCTTCTGTGCTTCCCAGCATTGCAAGAGACGGGGTATAAGCTTTATAGGAATTCTGCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS-3UTR CAA 90 bp AATGAAGGGAAAAGGAAGAGCGGGTCTGAGATCCTTTGGATTATCTTTACGAAGCGATCTGAATTAGACTaGAATTTGGATCCACAGACT +
Preference number: 5 (lower is better)
Translates to: NEGKRKSGSEILWIIFTKRSELD*NLDPQT
Trigger: AGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCG...CTTCGTAAAGATAATCCAAAGGATCTCAGACCCGCTCTTCCTTTTCCCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
CDS CCA 72 bp AGCCTCCAACATCCTGGCCGGAGCGGGGCGGGCGGCTaGGCTCGCGGACGGCCGAGTCCCTGCCGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SLQHPGRSGAGG*ARGRPSPCRSL
Trigger: CAGCGACCGGCAGGGACTCGGCCGTCCGCGAGCCCAGCCGCCCGCCCCGCTCCGGCCAGGATGTTGGAGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330115.3
ENST00000419280.5
ENST00000494894.5
CDS CCA 72 bp AGGCCAGCCAGGGCCGACAGGAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTCCCCCGGCACTGGGCA +
Preference number: 6 (lower is better)
Translates to: RPARADRSRVHR*MEGNVFPRHWA
Trigger: TGCCCAGTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS CCA 72 bp GCAGCAGGTACTCAGGGTGCTGGTCGTGGGCCACAATaGCCGAGGCATAGAGGAGGCCAGCCAGGGCCGACA +
Preference number: 6 (lower is better)
Translates to: AAGTQGAGRGPQ*PRHRGGQPGPT
Trigger: TGTCGGCCCTGGCTGGCCTCCTCTATGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGAGTACCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS TCA 72 bp AATGTCTTCCCCCGGCACATCTCAGTGCCCAGCACCTaGCGCTGGGCAGCGGCTCGCCAATGTCCGCTGGGA +
Preference number: 6 (lower is better)
Translates to: NVFPRHISVPST*RWAAARQCPLG
Trigger: TCCCAGCGGACATTGGCGAGCCGCTGCCCAGCGTCAGGTGCTGGGCACTGAGATGTGCCGGGGGAAGACATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS CCA 72 bp AGGCCAGCCAGGGCCGACAGGAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTCCCCCGGCACATCTCA +
Preference number: 6 (lower is better)
Translates to: RPARADRSRVHR*MEGNVFPRHIS
Trigger: TGAGATGTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 72 bp GGATGGAGGGAAATGTCTTCCCCCGGCACATCTCAGTaGCCAGCACCTGACGCTGGGCAGCGGCTCGCCAAT +
Preference number: 6 (lower is better)
Translates to: GWREMSSPGTSQ*PAPDAGQRLAN
Trigger: ATTGGCGAGCCGCTGCCCAGCGTCAGGTGCTGGGCACTGAGATGTGCCGGGGGAAGACATTTCCCTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 72 bp CCCTCAGTGGCACAGCAGGTTGCGGGGCAAGCCCTCTaGCTGCAGCCAGTCCTCCAGGGCAATGCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: PSVAQQVAGQAL*LQPVLQGNASV
Trigger: AACAGAAGCATTGCCCTGGAGGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS CCA 72 bp GTCTGGCCAGAAGAGCCCCGACGGTGTCACACAGACTaGTCAGGAGGCAGCACGCAGCACACAGTGCCGACT +
Preference number: 6 (lower is better)
Translates to: VWPEEPRRCHTD*SGGSTQHTVPT
Trigger: AGTCGGCACTGTGTGCTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCGTCGGGGCTCTTCTGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330115.3
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000419280.5
ENST00000430601.1
ENST00000473092.5
ENST00000494894.5
CDS CCA 72 bp AGGCCAGCCAGGGCCGACAGGAGCCGGGTCCACAGGTaGATGGAGGGAAATGTCTTCCCCCGGCAAATTCTG +
Preference number: 6 (lower is better)
Translates to: RPARADRSRVHR*MEGNVFPRQIL
Trigger: CAGAATTTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000473092.5
ENST00000494894.5
CDS TCA 72 bp CTGGGCAGCGGCTCGCCAATGTCCGCTGGGAGAACGTaGGGGAGACTGGGATGGTTTGGACATTTGTCCCCG +
Preference number: 6 (lower is better)
Translates to: LGSGSPMSAGRT*GRLGWFGHLSP
Trigger: CGGGGACAAATGTCCAAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGACATTGGCGAGCCGCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS GCA 72 bp CAGTGGCACAGCAGGTTGCGGGGCAAGCCCTCTGCCTaGAGCCAGTCCTCCAGGGCAATGCTTCTGTTAGAC +
Preference number: 6 (lower is better)
Translates to: QWHSRLRGKPSA*SQSSRAMLLLD
Trigger: GTCTAACAGAAGCATTGCCCTGGAGGACTGGCTGCAGGCAGAGGGCTTGCCCCGCAACCTGCTGTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS GCA 72 bp ATGCATCAAGGGACACCAGGAGCCACTAGCAGCTCCTaGAGCTCCACTGGCAGCTGTAGTCCCAGCTACTCG +
Preference number: 6 (lower is better)
Translates to: MHQGTPGATSSS*SSTGSCSPSYS
Trigger: CGAGTAGCTGGGACTACAGCTGCCAGTGGAGCTGCAGGAGCTGCTAGTGGCTCCTGGTGTCCCTTGATGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419280.5
CDS GCA 72 bp CACACACCCACATGCACACGCACACCCACACAGGACTaGACTGGCTCCAGGCACAGGCGTTCTTCACTATGC +
Preference number: 6 (lower is better)
Translates to: HTPTCTRTPTQD*TGSRHRRSSLC
Trigger: GCATAGTGAAGAACGCCTGTGCCTGGAGCCAGTGCAGTCCTGTGTGGGTGTGCGTGTGCATGTGGGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS TCA 72 bp GGTTCACATCTTCAGGGTCCCACTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGGAGCTGCCGGAAGACA +
Preference number: 6 (lower is better)
Translates to: GSHLQGPTPGRS*WRRPQRSCRKT
Trigger: TGTCTTCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGTGGGACCCTGAAGATGTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000477651.5
CDS GCA 72 bp ACACAGACTGGTCAGGAGGCAGCACGCAGCACACAGTaGCGACTGGTCCTGTCTGGGTTTCTGTGCACATCT +
Preference number: 6 (lower is better)
Translates to: TQTGQEAARSTQ*RLVLSGFLCTS
Trigger: AGATGTGCACAGAAACCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGCTGCCTCCTGACCAGTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330115.3
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000419280.5
ENST00000430601.1
ENST00000473092.5
ENST00000494894.5
CDS CCA 72 bp GCTCGCCAATGTCCGCTGGGAGAACGTGAGGGAGACTaGGATGGTTTGGACATTTGTCCCCGCCAGATCTCA +
Preference number: 6 (lower is better)
Translates to: ARQCPLGEREGD*DGLDICPRQIS
Trigger: TGAGATCTGGCGGGGACAAATGTCCAAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGACATTGGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS CCA 72 bp CACTGTTCTCATGGCCCACACAGGTACACCCACACATaGGCATGCGTGCACACACCCACATGCACACGCACA +
Preference number: 6 (lower is better)
Translates to: HCSHGPHRYTHT*ACVHTPTCTRT
Trigger: TGTGCGTGTGCATGTGGGTGTGTGCACGCATGCCCATGTGTGGGTGTACCTGTGTGGGCCATGAGAACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS GCA 72 bp CATCACACACGAAAGGAAAATAATAGCGAGGTCCAGTaGCGCACGGCCGAGGGAGGTCAGGAACCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: HHTRKENNSEVQ*RTAEGGQEPGC
Trigger: ACACCCTGGTTCCTGACCTCCCTCGGCCGTGCGGCACTGGACCTCGCTATTATTTTCCTTTCGTGTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS CCA 72 bp GTCCGCTGGGAGAACGTGAGGGAGACTGGGATGGTTTaGACATTTGTCCCCGCCAGATCTCATGTTGAGTCG +
Preference number: 6 (lower is better)
Translates to: VRWENVRETGMV*TFVPARSHVES
Trigger: CGACTCAACATGAGATCTGGCGGGGACAAATGTCCAAACCATCCCAGTCTCCCTCACGTTCTCCCAGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392432.6
CDS TCA 72 bp AGTTTAGGGCCTCCCAATACTTCTCCAGGTCGGAGTTaGTGGAGGAGACCTCAGAGGAGCTGCCGGAAGACA +
Preference number: 6 (lower is better)
Translates to: SLGPPNTSPGRS*WRRPQRSCRKT
Trigger: TGTCTTCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGAAGTATTGGGAGGCCCTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473092.5
CDS CCA 72 bp TCACATCTTCAGGGTCCCACTTTGAGGTTCCAGCCATaGAGGCAAGTAGGGATTGGGCTCCAGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SHLQGPTLRFQP*RQVGIGLQFSS
Trigger: GGAGGAGAACTGGAGCCCAATCCCTACTTGCCTCCATGGCTGGAACCTCAAAGTGGGACCCTGAAGATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS GCA 72 bp GCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTCCA +
Preference number: 6 (lower is better)
Translates to: APGIPVAPHFLC*LRGSHLQGPTP
Trigger: TGGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000452358.5
ENST00000477651.5
CDS GCA 72 bp GGTGCACCTGGGATCCCAGTAGCTCCACATTTTCTTTaGTGCCTTCGAGGTTCACATCTTCAGGGTCCCACT +
Preference number: 6 (lower is better)
Translates to: GAPGIPVAPHFL*CLRGSHLQGPT
Trigger: AGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000429560.1
ENST00000432352.5
ENST00000452358.5
ENST00000473092.5
ENST00000476750.1
ENST00000477651.5
CDS GCA 72 bp GCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTGCT +
Preference number: 6 (lower is better)
Translates to: APGIPVAPHFLC*LRGSHLQGPTA
Trigger: AGCAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432352.5
ENST00000473092.5
CDS GCA 72 bp GCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTCAG +
Preference number: 6 (lower is better)
Translates to: APGIPVAPHFLC*LRGSHLQGPTQ
Trigger: CTGAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429560.1
CDS GCA 72 bp GCACCTGGGATCCCAGTAGCTCCACATTTTCTTTGCTaGCTTCGAGGTTCACATCTTCAGGGTCCCACTTTG +
Preference number: 6 (lower is better)
Translates to: APGIPVAPHFLC*LRGSHLQGPTL
Trigger: CAAAGTGGGACCCTGAAGATGTGAACCTCGAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS CCA 72 bp AGCCTTAGGCACAGAATTAATAGGAACACACGGGCCTaGGACTTGGCCCTCTTCAGACAGAGCAATCTGGCA +
Preference number: 6 (lower is better)
Translates to: SLRHRINRNTRA*DLALFRQSNLA
Trigger: TGCCAGATTGCTCTGTCTGAAGAGGGCCAAGTCCCAGGCCCGTGTGTTCCTATTAATTCTGTGCCTAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 90 bp GCACAGGTCAAAAGGGCTTGGGTGTCAGGGCTCTCTCTGGCTTCCTaGGCAAATCCTAAGGCCTGTCTCATCTTGCTAATTCTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: AQVKRAWVSGLSLAS*ANPKACLILLILER
Trigger: TCTCTCCAGAATTAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452358.5
CDS GCA 72 bp GGCAGACATCCAGGGGAATATGCCCTTATCTGCTGGTaGCAGAAAGTTTGGAGAGAGAACAAGCAGTTGGGT +
Preference number: 6 (lower is better)
Translates to: GRHPGEYALICW*QKVWRENKQLG
Trigger: ACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 72 bp GGCACAGAATTAATAGGAACACACGGGCCTGGGACTTaGCCCTCTTCAGACAGAGCAATCTGGCATTTAGCA +
Preference number: 6 (lower is better)
Translates to: GTELIGTHGPGT*PSSDRAIWHLA
Trigger: TGCTAAATGCCAGATTGCTCTGTCTGAAGAGGGCCAAGTCCCAGGCCCGTGTGTTCCTATTAATTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 72 bp CACTTTGAGGTTCCAGCCATGGAGGCAAGTAGGGATTaGGCTCCAGTTCTCCTCCTGTCACTAATTTGCCTT +
Preference number: 6 (lower is better)
Translates to: HFEVPAMEASRD*APVLLLSLICL
Trigger: AAGGCAAATTAGTGACAGGAGGAGAACTGGAGCCCAATCCCTACTTGCCTCCATGGCTGGAACCTCAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476750.1
CDS CAA 90 bp AAGAGCCTTAGGCACAGAATTAATAGGAACACACGGGCCTGGGACTaGGCCCTCTTCAGACAGAGCAATCTGGCATTTAGCACTGTTCTC +
Preference number: 6 (lower is better)
Translates to: KSLRHRINRNTRAWD*ALFRQSNLAFSTVL
Trigger: GAGAACAGTGCTAAATGCCAGATTGCTCTGTCTGAAGAGGGCCAAGTCCCAGGCCCGTGTGTTCCTATTAATTCTGTGCCTAAGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 90 bp TGCAGCCAGTCCTCCAGGGCAATGCTTCTGTTAGACTTACAGCTTTaGCTCGAGTTGCTTCTTCTGCCTGTCAAACTCCTACTCATCCCT +
Preference number: 6 (lower is better)
Translates to: CSQSSRAMLLLDLQL*LELLLLPVKLLLIP
Trigger: AGGGATGAGTAGGAGTTTGACAGGCAGAAGAAGCAACTCGAGCAAAAGCTGTAAGTCTAACAGAAGCATTGCCCTGGAGGACTGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS CCA 72 bp AAGGGCAGACATCCAGGGGAATATGCCCTTATCTGCTaGTGCCAGAAAGTTTGGAGAGAGAACAAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: KGRHPGEYALIC*CQKVWRENKQL
Trigger: CAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp TTCTGGGCCCTAACGCATCCCTCCAGCGGAGTACCTTaGATTGATCATGACTCAGCTCTTTACACAGTCAGA +
Preference number: 6 (lower is better)
Translates to: FWALTHPSSGVP*IDHDSALYTVR
Trigger: TCTGACTGTGTAAAGAGCTGAGTCATGATCAATCAAAGGTACTCCGCTGGAGGGATGCGTTAGGGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS CAA 90 bp GGGCTCTCTCTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAAAGGAAAATAATAGCGAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: GLSLASLANPKACLI*LFITHERKIIARSS
Trigger: ACTGGACCTCGCTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAGAGAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS CAA 90 bp CAGACATCCAGGGGAATATGCCCTTATCTGCTGGTGCCAGAAAGTTaGGAGAGAGAACAAGCAGTTGGGTTATCAAGAGCCTTAGGCACA +
Preference number: 6 (lower is better)
Translates to: QTSRGICPYLLVPES*EREQAVGLSRALGT
Trigger: TGTGCCTAAGGCTCTTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCTGGATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CCA 72 bp GGGGAATATGCCCTTATCTGCTGGTGCCAGAAAGTTTaGAGAGAGAACAAGCAGTTGGGTTATCAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: GEYALICWCQKV*RENKQLGYQEP
Trigger: AGGCTCTTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp AGGGGAATATGCCCTTATCTGCTGGTGCCAGAAAGTTaGGAGAGAGAACAAGCAGTTGGGTTATCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: RGICPYLLVPES*EREQAVGLSRA
Trigger: GGCTCTTGATAACCCAACTGCTTGTTCTCTCTCCAAACTTTCTGGCACCAGCAGATAAGGGCATATTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp TCCTCCAGGGCAATGCTTCTGTTAGACTTACAGCTTTaGCTCGAGTTGCTTCTTCTGCCTGTCAAACTCCTA +
Preference number: 6 (lower is better)
Translates to: SSRAMLLLDLQL*LELLLLPVKLL
Trigger: TAGGAGTTTGACAGGCAGAAGAAGCAACTCGAGCAAAAGCTGTAAGTCTAACAGAAGCATTGCCCTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477651.5
CDS CAA 90 bp AAACAGCCTCCTTGCAGAATTCCTATAAAGCTTATACCCCGTCTCTaGCAATGCTGGGAAGCACAGAAGGGAAAAATTGACTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: KQPPCRIPIKLIPRL*QCWEAQKGKIDWML
Trigger: CAGCATCCAGTCAATTTTTCCCTTCTGTGCTTCCCAGCATTGCAAGAGACGGGGTATAAGCTTTATAGGAATTCTGCAAGGAGGCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp CTGGCTTCCTTGGCAAATCCTAAGGCCTGTCTCATCTaGCTCTTCATCACACACGAAAGGAAAATAATAGCG +
Preference number: 6 (lower is better)
Translates to: LASLANPKACLI*LFITHERKIIA
Trigger: CGCTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTTAGGATTTGCCAAGGAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347147.9
ENST00000381975.7
ENST00000392432.6
ENST00000432352.5
ENST00000473092.5
ENST00000477651.5
ENST00000494894.5
CDS CAA 72 bp CCTTGCAGAATTCCTATAAAGCTTATACCCCGTCTCTaGCAATGCTGGGAAGCACAGAAGGGAAAAATTGAC +
Preference number: 6 (lower is better)
Translates to: PCRIPIKLIPRL*QCWEAQKGKID
Trigger: GTCAATTTTTCCCTTCTGTGCTTCCCAGCATTGCAAGAGACGGGGTATAAGCTTTATAGGAATTCTGCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 90 bp GTTCTTCACTATGCAGACTTTGTTCCAATGACAGAAACAGCCTCCTaGCAGAATTCCTATAAAGCTTATACCCCGTCTCTTGCAATGCTG +
Preference number: 6 (lower is better)
Translates to: VLHYADFVPMTETAS*QNSYKAYTPSLAML
Trigger: CAGCATTGCAAGAGACGGGGTATAAGCTTTATAGGAATTCTGCAAGGAGGCTGTTTCTGTCATTGGAACAAAGTCTGCATAGTGAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp TATGCAGACTTTGTTCCAATGACAGAAACAGCCTCCTaGCAGAATTCCTATAAAGCTTATACCCCGTCTCTT +
Preference number: 6 (lower is better)
Translates to: YADFVPMTETAS*QNSYKAYTPSL
Trigger: AAGAGACGGGGTATAAGCTTTATAGGAATTCTGCAAGGAGGCTGTTTCTGTCATTGGAACAAAGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467284.1
CDS CAA 72 bp GGAAAAATTGACTGGATGCTGTCTATAAATGTACTTTaGTCACAAAGGTGGACTGAACCTTTTCTTGAATCC +
Preference number: 6 (lower is better)
Translates to: GKIDWMLSINVL*SQRWTEPFLES
Trigger: GGATTCAAGAAAAGGTTCAGTCCACCTTTGTGACAAAAGTACATTTATAGACAGCATCCAGTCAATTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467284.1