RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM43 (Homo sapiens)

Ensembl gene IDs: ENSG00000170876

Ensembl transcript IDs: ENST00000306077.5, ENST00000432444.1

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAATTGACCGGGGCTCCTGCTCTGGCATGGAGCTGGGTCAGAGGTaGGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGGGCGGG +
Preference number: 1 (lower is better)
Translates to: KIDRGSCSGMELGQR*ERTWILGLTQVSGG
Trigger: CCCGCCCGACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCCATGCCAGAGCAGGAGCCCCGGTCAATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 90 bp GCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTaGAAGCAGCCAGGCAGGCGTGGGCATTGTACAACCAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: AALGSPGAHIESTPR*KQPGRRGHCTTSLR
Trigger: CCTGAGGCTGGTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 90 bp GCAGGCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTGCCAATGGGCTaGGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACA +
Preference number: 1 (lower is better)
Translates to: AGLRRACLRCQLPMG*VAGRTHSVQERKET
Trigger: TGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp GCCCTTTATCAGCAGGCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTaGCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGAGA +
Preference number: 1 (lower is better)
Translates to: ALYQQASVERVCVVS*QWAEWLAVPTQSKR
Trigger: TCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGCCTGCTGATAAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp GCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTGCCAATGGGCTGAGTaGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAG +
Preference number: 1 (lower is better)
Translates to: ASVERVCVVSCQWAE*LAVPTQSKRGRKQQ
Trigger: CTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp TATCAGCAGGCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTGCCAATaGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGG +
Preference number: 1 (lower is better)
Translates to: YQQASVERVCVVSCQ*AEWLAVPTQSKRGR
Trigger: CCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGCCTGCTGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 90 bp GCATGGCACTTGTGTGCAGTGATGAGAAGCAGCACACGGCAAGGCTaGGCCCTTTATCAGCAGGCCTCCGTAGAGCGTGTCTGCGTTGTC +
Preference number: 1 (lower is better)
Translates to: AWHLCAVMRSSTRQG*ALYQQASVERVCVV
Trigger: GACAACGCAGACACGCTCTACGGAGGCCTGCTGATAAAGGGCTCAGCCTTGCCGTGTGCTGCTTCTCATCACTGCACACAAGTGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp CCAATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTaGATGCTGTCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAAT +
Preference number: 1 (lower is better)
Translates to: PMMCTSLPSFSGATL*MLSGDTTSESPSAN
Trigger: ATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CCA 90 bp TGCCCACATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTaGGCATTGTACAACCAGCCTCAGGCCTCAGTTCTTGATTGTGGT +
Preference number: 1 (lower is better)
Translates to: CPHRKHSQVKAARQA*ALYNQPQASVLDCG
Trigger: ACCACAATCAAGAACTGAGGCCTGAGGCTGGTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp TGCCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCCATTaGTACATCTCCACGTGCCTCCGCAGTTTCACAGCCGGAAGATGG +
Preference number: 1 (lower is better)
Translates to: CPSSVYSLDSSVSTH*YISTCLRSFTAGRW
Trigger: CCATCTTCCGGCTGTGAAACTGCGGAGGCACGTGGAGATGTACCAATGGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGGATGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR TCA 90 bp CAGGCAGGCGTGGGCATTGTACAACCAGCCTCAGGCCTCAGTTCTTaGTTGTGGTTGACGGGGCGTCACCATGAAGGAGCCCATTTAGTA +
Preference number: 1 (lower is better)
Translates to: QAGVGIVQPASGLSS*LWLTGRHHEGAHLV
Trigger: TACTAAATGGGCTCCTTCATGGTGACGCCCCGTCAACCACAATCAAGAACTGAGGCCTGAGGCTGGTTGTACAATGCCCACGCCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp ACACCACATCAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTaGTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGA +
Preference number: 1 (lower is better)
Translates to: TPHQVLATDLCFGCA*FEGSMPSVSAGDPG
Trigger: TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTGATGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp GAGCTGCTGCTGCCCACCAAAGCTGCTTACTGGCAAGAAGAGATGTaGGGAAGACATGAGCTGGTGAACACCAACCTGGTGCACATGCTG +
Preference number: 1 (lower is better)
Translates to: ELLLPTKAAYWQEEM*GRHELVNTNLVHML
Trigger: CAGCATGTGCACCAGGTTGGTGTTCACCAGCTCATGTCTTCCCCACATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp AACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTaGGAGCTGGTTTTAACTTTGACATGTTCTCTCCGGGTACTGGTA +
Preference number: 1 (lower is better)
Translates to: NIPPEVSLSRSRKPG*ELVLTLTCSLRVLV
Trigger: TACCAGTACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CCA 90 bp CACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTaGCTGGGAGCTGGTTTTAACTTTGACATGTTCTCTCCGGGTACT +
Preference number: 1 (lower is better)
Translates to: HKHPTRGLAQPFQEA*LGAGFNFDMFSPGT
Trigger: AGTACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR GCA 90 bp GAAACAGCAGGAGAAGCTGTCAGCTTGCCATTCATGAGCTGCTGCTaGCCACCAAAGCTGCTTACTGGCAAGAAGAGATGTGGGGAAGAC +
Preference number: 1 (lower is better)
Translates to: ETAGEAVSLPFMSCC*PPKLLTGKKRCGED
Trigger: GTCTTCCCCACATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGCTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp AGGAAGGAAACAGCAGGAGAAGCTGTCAGCTTGCCATTCATGAGCTaGTGCTGCCCACCAAAGCTGCTTACTGGCAAGAAGAGATGTGGG +
Preference number: 1 (lower is better)
Translates to: RKETAGEAVSLPFMS*CCPPKLLTGKKRCG
Trigger: CCCACATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGCTGTTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp GATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTaGAGTGATGAGAAGCAGCACACGGCAAGGCTGAGCCCTTTATCA +
Preference number: 1 (lower is better)
Translates to: DHRCAWWWWQSMALV*SDEKQHTARLSPLS
Trigger: TGATAAAGGGCTCAGCCTTGCCGTGTGCTGCTTCTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp AAGGAAACAGCAGGAGAAGCTGTCAGCTTGCCATTCATGAGCTGCTaGTGCCCACCAAAGCTGCTTACTGGCAAGAAGAGATGTGGGGAA +
Preference number: 1 (lower is better)
Translates to: KETAGEAVSLPFMSC*CPPKLLTGKKRCGE
Trigger: TTCCCCACATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGCTGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 90 bp TTTGGATCAGACAAAAGCTTGGATGTCCGTAAGGCGCCAATGATGTaGACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTG +
Preference number: 1 (lower is better)
Translates to: FGSDKSLDVRKAPMM*TSLPSFSGATLWML
Trigger: CAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTTACGGACATCCAAGCTTTTGTCTGATCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR TCA 90 bp AAGAGAGGAAGGAAACAGCAGGAGAAGCTGTCAGCTTGCCATTCATaGGCTGCTGCTGCCCACCAAAGCTGCTTACTGGCAAGAAGAGAT +
Preference number: 1 (lower is better)
Translates to: KRGRKQQEKLSACHS*AAAAHQSCLLARRD
Trigger: ATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGCTGTTTCCTTCCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 90 bp TTAAACCATCTTCAAGTGCATAGGGGAGTTTCCGATGCCAGAGGATaGAAGCAAGTGCTTTCTCCACCCTCTCCTCCCAGAGTGAAAACA +
Preference number: 1 (lower is better)
Translates to: LNHLQVHRGVSDARG*KQVLSPPSPPRVKT
Trigger: TGTTTTCACTCTGGGAGGAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTATGCACTTGAAGATGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 90 bp AGCCTCAGGCCTCAGTTCTTGATTGTGGTTGACGGGGCGTCACCATaGAGGAGCCCATTTAGTATAAAGCTTCCAACCTTTTCTCTTAAT +
Preference number: 1 (lower is better)
Translates to: SLRPQFLIVVDGASP*RSPFSIKLPTFSLN
Trigger: ATTAAGAGAAAAGGTTGGAAGCTTTATACTAAATGGGCTCCTTCATGGTGACGCCCCGTCAACCACAATCAAGAACTGAGGCCTGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 90 bp TGTGACTTAGGTGTGGGTGGATCTTATTTAGGAAGACTAAAGCTATaGACACAACACGTGAAAGAACCACTCAGAAGCAGCCCTAGGAAG +
Preference number: 1 (lower is better)
Translates to: CDLGVGGSYLGRLKL*TQHVKEPLRSSPRK
Trigger: CTTCCTAGGGCTGCTTCTGAGTGGTTCTTTCACGTGTTGTGTCCATAGCTTTAGTCTTCCTAAATAAGATCCACCCACACCTAAGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGAGCTCTGGCATGGAGCTaGGTCAGAGGTGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGALAWS*VRGERG
Trigger: TCCTCTCTCACCTCTGACCCAGCTCCATGCCAGAGC...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAGGAGAAGCCGGGGCTCCTGCTCTaGCATGGAGCTGGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: EWLAVPTQSKRGRKQQEKPGLLL*HGAGSE
Trigger: CTCTGACCCAGCTCCATGCCAGAGCAGGAGCCCCGG...CTTCTCCTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGATCAGCTTGCCATTCATaGGCTGCTGCTGCCCACCAA +
Preference number: 2 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGSACHS*AAAAHQ
Trigger: TTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGA...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGATCCGTAGAGCGTGTCTaGGTTGTCAGCTGCCAATGG +
Preference number: 2 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGSVERV*VVSCQW
Trigger: CCATTGGCAGCTGACAACGCAGACACGCTCTACGGA...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGCCAATGGGCTGAGTaGCTGGCCGTACCCACTCAG +
Preference number: 2 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTCQWAE*LAVPTQ
Trigger: CTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCA...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGCAGAGTCCAAAATTaGCCGGGGCTCCTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTCRVQN*PGLLLW
Trigger: CCAGAGCAGGAGCCCCGGTCAATTTTGGACTCTGCA...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGCCAACCTGGTGCACATaGTGCCAAGTCTGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMPTWCT*CQVWPL
Trigger: CAGGGGCCAGACTTGGCAGCATGTGCACCAGGTTGG...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGACTCAGCAGTAATGACAGATGTGCTTGGTGGTaGTGGCAAAGCATGGCACTT +
Preference number: 2 (lower is better)
Translates to: EGSMPSVSAGDPGLSSNDRCAWW*WQSMAL
Trigger: AAGTGCCATGCTTTGCCACCACCACCAAGCACATCT...GTCATTACTGCTGAGTCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAACACAGATGTGCTTGGTaGTGGTGGCAAAGCATGGCA +
Preference number: 2 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKHRCAW*WWQSMA
Trigger: TGCCATGCTTTGCCACCACCACCAAGCACATCTGTG...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp TCATTCTCCGGAGCCACACTGTGGATGCTGTCGGGAGACACCACAAGCGAGAGCTCCAGGAAGCCTGGCTaGGAGCTGGTTTTAACTTTG +
Preference number: 2 (lower is better)
Translates to: SFSGATLWMLSGDTTSESSRKPG*ELVLTL
Trigger: CAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGA...GCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR-3UTR GCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGACCTGGTGCACATGCTaGCAAGTCTGGCCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMTWCTC*QVWPLK
Trigger: CTTCAGGGGCCAGACTTGGCAGCATGTGCACCAGGT...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp GGATCTTATTTAGGAAGACTAAAGCTATGGACACAACACGTGAAAGAACCACTCCAGCTGCCAATGGGCTaGGTGGCTGGCCGTACCCAC +
Preference number: 2 (lower is better)
Translates to: GSYLGRLKLWTQHVKEPLQLPMG*VAGRTH
Trigger: GTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTG...GAGTGGTTCTTTCACGTGTTGTGTCCATAGCTTTAGTCTTCCTAAATAAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp ACACCACATCAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTGCTTTGAGAGCATGGCACTTGTGTaGAGTGATGAGAAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: TPHQVLATDLCFGCACFESMALV*SDEKQH
Trigger: GTGCTGCTTCTCATCACTGCACACAAGTGCCATGCT...CTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTGATGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTACATGCTGCCAAGTCTaGCCCCTGAAGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSTCCQV*PLKRRG
Trigger: CCCTCTCCTCTTCAGGGGCCAGACTTGGCAGCATGT...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTTGGGTGTGCCTGCTTTaGGGGGTCCATGCCCAGTGT +
Preference number: 2 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSWVCLL*GVHAQC
Trigger: ACACTGGGCATGGACCCCTCAAAGCAGGCACACCCA...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GGATCTTATTTAGGAAGACTAAAGCTATGGACACAACACGTGAAAGAACCACTCAATGGGCTGAGTGGCTaGCCGTACCCACTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: GSYLGRLKLWTQHVKEPLNGLSG*PYPLSP
Trigger: TGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATT...GAGTGGTTCTTTCACGTGTTGTGTCCATAGCTTTAGTCTTCCTAAATAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTAGCACACGGCAAGGCTaGGCCCTTTATCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: EVLTPYSATKYLIAKGITSTRQG*ALYQQA
Trigger: GGCCTGCTGATAAAGGGCTCAGCCTTGCCGTGTGCT...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTGAAGACATGAGCTGGTaGACACCAACCTGGTGCACA +
Preference number: 2 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSEDMSW*TPTWCT
Trigger: TGTGCACCAGGTTGGTGTTCACCAGCTCATGTCTTC...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp ACGAAGAAAAACTTAAATAGGGCCTTCAGAGATCCCACACACTACAAAGATTCTTTGCCATTCATGAGCTaGTGCTGCCCACCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: TKKNLNRAFRDPTHYKDSLPFMS*CCPPKL
Trigger: CAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAA...AGAATCTTTGTAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGTTTTTCTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGCTTTGAGGGGTCCATaGCCAGTGTGTCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: LLILVSKASIVKLLSDTKALRGP*PVCLLV
Trigger: CACCAGCAGACACACTGGGCATGGACCCCTCAAAGC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CCA 90 bp GGATCTTATTTAGGAAGACTAAAGCTATGGACACAACACGTGAAAGAACCACTCGATCACAGATGTGCTTaGTGGTGGTGGCAAAGCATG +
Preference number: 2 (lower is better)
Translates to: GSYLGRLKLWTQHVKEPLDHRCA*WWWQSM
Trigger: CATGCTTTGCCACCACCACCAAGCACATCTGTGATC...GAGTGGTTCTTTCACGTGTTGTGTCCATAGCTTTAGTCTTCCTAAATAAGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp ACTTTTTATCAATCAAACCACATACCCCAATTTAACACCTTTCAGTGCTCTGAAGATGTGGGGAAGACATaGGCTGGTGAACACCAACCT +
Preference number: 2 (lower is better)
Translates to: TFYQSNHIPQFNTFQCSEDVGKT*AGEHQP
Trigger: AGGTTGGTGTTCACCAGCTCATGTCTTCCCCACATC...TTCAGAGCACTGAAAGGTGTTAAATTGGGGTATGTGGTTTGATTGATAAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTCCATTCATGAGCTGCTaGTGCCCACCAAAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: EVLTPYSATKYLIAKGITPFMSC*CPPKLL
Trigger: AAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGG...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGCTGCCCACCAAAGCTaGTTACTGGCAAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: LLILVSKASIVKLLSDTKAAHQS*LLARRD
Trigger: ATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR GCA 90 bp ACTTTTTATCAATCAAACCACATACCCCAATTTAACACCTTTCAGTGCTCTGAATTCATGAGCTGCTGCTaGCCACCAAAGCTGCTTACT +
Preference number: 2 (lower is better)
Translates to: TFYQSNHIPQFNTFQCSEFMSCC*PPKLLT
Trigger: AGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAA...TTCAGAGCACTGAAAGGTGTTAAATTGGGGTATGTGGTTTGATTGATAAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR TCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGTAGGAAAGTACACATaGAGCAGCAAAGTAACGAAG +
Preference number: 2 (lower is better)
Translates to: LLILVSKASIVKLLSDTKVGKYT*SSKVTK
Trigger: CTTCGTTACTTTGCTGCTTCATGTGTACTTTCCTAC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp CAGCAGGCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTaGCAATGGGCTGAGTGGCTGGCCGTACCCACTCAG +
Preference number: 3 (lower is better)
Translates to: QQASVERVCVVS*QWAEWLAVPTQ
Trigger: CTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp GCCTCCGTAGAGCGTGTCTGCGTTGTCAGCTGCCAATaGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: ASVERVCVVSCQ*AEWLAVPTQSK
Trigger: CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp CGTAGAGCGTGTCTGCGTTGTCAGCTGCCAATGGGCTaGGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: RRACLRCQLPMG*VAGRTHSVQER
Trigger: CCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp GGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTaGAAGCAGCCAGGCAGGCGTGGGCATTGTACAACC +
Preference number: 3 (lower is better)
Translates to: GSPGAHIESTPR*KQPGRRGHCTT
Trigger: GGTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp GTCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATaGGGTTGCCGTCTTCAATGCGCGGCCCTCATTGGT +
Preference number: 3 (lower is better)
Translates to: VGRHHKREPLSQ*GCRLQCAALIG
Trigger: ACCAATGAGGGCCGCGCATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR GCA 72 bp CCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATaGTGTCGGGAGACACCACAAGCGAGAGCCCCTCAG +
Preference number: 3 (lower is better)
Translates to: PAFLHSPEPHCG*CRETPQARAPQ
Trigger: CTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CCA 72 bp GAGCGTGTCTGCGTTGTCAGCTGCCAATGGGCTGAGTaGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: ERVCVVSCQWAE*LAVPTQSKRGR
Trigger: CCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp TGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTaGATGCTGTCGGGAGACACCACAAGCGAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: CTSLPSFSGATL*MLSGDTTSESP
Trigger: GGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CCA 72 bp GTGTCTGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTaGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: VSALSAANGLSG*PYPLSPREEGN
Trigger: GTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp CGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTaGGCATTGTACAACCAGCCTCAGGCCTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: RKHSQVKAARQA*ALYNQPQASVL
Trigger: AAGAACTGAGGCCTGAGGCTGGTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CAA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGGAGAAGCTGTCAGCTaGCCATTCATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKGEAVS*PFMSCC
Trigger: GCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp TTGTGTGCAGTGATGAGAAGCAGCACACGGCAAGGCTaGGCCCTTTATCAGCAGGCCTCCGTAGAGCGTGTC +
Preference number: 3 (lower is better)
Translates to: LCAVMRSSTRQG*ALYQQASVERV
Trigger: GACACGCTCTACGGAGGCCTGCTGATAAAGGGCTCAGCCTTGCCGTGTGCTGCTTCTCATCACTGCACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp GTGGGCATTGTACAACCAGCCTCAGGCCTCAGTTCTTaGTTGTGGTTGACGGGGCGTCACCATGAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: VGIVQPASGLSS*LWLTGRHHEGA
Trigger: GGCTCCTTCATGGTGACGCCCCGTCAACCACAATCAAGAACTGAGGCCTGAGGCTGGTTGTACAATGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp TGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTaGAGTGATGAGAAGCAGCACACGGCAAGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: CAWWWWQSMALV*SDEKQHTARLS
Trigger: GCTCAGCCTTGCCGTGTGCTGCTTCTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp ACTTGTGTTTTGGGTGTGCCTGCTTTGAGGGGTCCATaGCCAGTGTGTCTGCTGGTGACCCAGGACTCAGCA +
Preference number: 3 (lower is better)
Translates to: TCVLGVPALRGP*PVCLLVTQDSA
Trigger: TGCTGAGTCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCCAAAACACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp ACGGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTaGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAG +
Preference number: 3 (lower is better)
Translates to: TAALQDHRCAWW*WQSMALVCSDE
Trigger: CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp CCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTaGCTGGGAGCTGGTTTTAACTTTGACATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: PTRGLAQPFQEA*LGAGFNFDMFS
Trigger: AGAGAACATGTCAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR GCA 72 bp CAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTaGTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: QVLATDLCFGCA*FEGSMPSVSAG
Trigger: ACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CCA 72 bp CTAACGGCCGCCCTTCAGGATCACAGATGTGCTTGGTaGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGAT +
Preference number: 3 (lower is better)
Translates to: LTAALQDHRCAW*WWQSMALVCSD
Trigger: ATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCCGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp GCAGGAGAAGCTGTCAGCTTGCCATTCATGAGCTGCTaGTGCCCACCAAAGCTGCTTACTGGCAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: AGEAVSLPFMSC*CPPKLLTGKKR
Trigger: TCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp ACAGCAGGAGAAGCTGTCAGCTTGCCATTCATGAGCTaGTGCTGCCCACCAAAGCTGCTTACTGGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: TAGEAVSLPFMS*CCPPKLLTGKK
Trigger: CTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR GCA 72 bp GACAAAAGCTTGGATGTCCGTAAGGCGCCAATGATGTaGACCAGCCTTCCTTCATTCTCCGGAGCCACACTG +
Preference number: 3 (lower is better)
Translates to: DKSLDVRKAPMM*TSLPSFSGATL
Trigger: CAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTTACGGACATCCAAGCTTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR TCA 72 bp GATCAGACAAAAGCTTGGATGTCCGTAAGGCGCCAATaGTGTGCACCAGCCTTCCTTCATTCTCCGGAGCCA +
Preference number: 3 (lower is better)
Translates to: DQTKAWMSVRRQ*CAPAFLHSPEP
Trigger: TGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTTACGGACATCCAAGCTTTTGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR GCA 72 bp GGAGAAGCTGTCAGCTTGCCATTCATGAGCTGCTGCTaGCCACCAAAGCTGCTTACTGGCAAGAAGAGATGT +
Preference number: 3 (lower is better)
Translates to: GEAVSLPFMSCC*PPKLLTGKKRC
Trigger: ACATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CAA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCGGATCACAGATGTGCTaGGTGGTGGTGGCAAAGCAT +
Preference number: 3 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLGSQMC*VVVAKH
Trigger: ATGCTTTGCCACCACCACCAAGCACATCTGTGATCC...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CAA 90 bp GATGTCCGTAAGGCGCCAATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCGAGCTGGTTTTAACTTaGACATGTTCTCTCCGGGTA +
Preference number: 3 (lower is better)
Translates to: DVRKAPMMCTSLPSFSGAELVLT*TCSLRV
Trigger: TACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTC...GGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTTACGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR-3UTR CAA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTGTGCAGAGTCCAAAATaGACCGGGGCTCCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSVQSPK*TGAPAL
Trigger: CAGAGCAGGAGCCCCGGTCAATTTTGGACTCTGCAC...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR-3UTR CAA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTCTCAGGCCTCAGTTCTaGATTGTGGTTGACGGGGCG +
Preference number: 3 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSLRPQF*IVVDGA
Trigger: CGCCCCGTCAACCACAATCAAGAACTGAGGCCTGAG...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp CCTCAGTTCTTGATTGTGGTTGACGGGGCGTCACCATaGAGGAGCCCATTTAGTATAAAGCTTCCAACCTTT +
Preference number: 3 (lower is better)
Translates to: PQFLIVVDGASP*RSPFSIKLPTF
Trigger: AAAGGTTGGAAGCTTTATACTAAATGGGCTCCTTCATGGTGACGCCCCGTCAACCACAATCAAGAACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp CAGATAAGTCATCTTGGGCTGGCTGTGTTTTTCATGTaGAGAAACTCATTTATAGCACAGGCACCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: QISHLGLAVFFM*RNSFIAQAPQA
Trigger: GGCCTGGGGTGCCTGTGCTATAAATGAGTTTCTTCACATGAAAAACACAGCCAGCCCAAGATGACTTATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR TCA 72 bp AATCTCTCGGTCGAAGTTTTTGCTGTTGATGATTTCTaGCCTCCATTCAGTGTTGTAGGAATACCTCGTCTC +
Preference number: 3 (lower is better)
Translates to: NLSVEVFAVDDF*PPFSVVGIPRL
Trigger: GAGACGAGGTATTCCTACAACACTGAATGGAGGTCAGAAATCATCAACAGCAAAAACTTCGACCGAGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp CAAGCGAGAGCCCCTCAGCCAATGAGGTTGCCGTCTTCAATGCGCGGCCCTCATTGGGACCCGGCTCGCTaGCGCCGCCTCGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QARAPQPMRLPSSMRGPHWDPAR*RRLALF
Trigger: GAACAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCCA...ATGAGGGCCGCGCATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp CATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCGATTCGCGGCCATGGTaGGACCCGGCTCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HEPHKHPTRGLAQPFQEADSRPW*DPARCR
Trigger: GCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATC...GGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp CCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGCTGACGACTGGAGCGTaGTGTCCAGCGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PQTSHPRSRSAVPGSLAGLTTGA*CPAASC
Trigger: GCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAG...CCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGAGAGAATGGGACTAGCTaGTCACCCCGCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGENGTS*SPRCRA
Trigger: TGCCCGGCAGCGGGGTGACCAGCTAGTCCCATTCTC...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGGCCATCCAGCCAGCTaGCCGCAGGCCCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKGHPAS*PQAPGL
Trigger: AAGACCTGGGGCCTGCGGGCAGCTGGCTGGATGGCC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGACTTCGAAAATCCGCGTaGACTCCAGGGCCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGLRKSA*TPGPSG
Trigger: CCCGCTTGGCCCTGGAGTCCACGCGGATTTTCGAAG...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGCAGGGTCAGCGAGGTaGCCACACAGAAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVAGSAR*PHRRQR
Trigger: CCTTTGCCTTCTGTGTGGCCACCTCGCTGACCCTGC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGAGCCCCTCAGCCAATaGGGTTGCCGTCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVEPLSQ*GCRLQC
Trigger: GCATTGAAGACGGCAACCTCATTGGCTGAGGGGCTC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGTCCAGCGGCCTCTTaGCAGCCCCAGCTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: HEPHKHPTRGLAQPFQEACPAAS*QPQLRK
Trigger: TTTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACA...GGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGCTTTGAGGGGTCCATaGCCAGTGTGTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVALRGP*PVCLLV
Trigger: CACCAGCAGACACACTGGGCATGGACCCCTCAAAGC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGAGCTGGTTTTACCAAGCGGGACTTACTaGAGTTACCTCCCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PPEVSLSRSRKPGWELVLPSGTY*SYLPLC
Trigger: GCACAGGGGGAGGTAACTGCAGTAAGTCCCGCTTGG...TAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp TGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGAAACACCTCCTCTGCTaGGAAGTCCCCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CVVSCQWAEWLAVPTQSKKHLLC*EVPVVQ
Trigger: CTGCACCACGGGGACTTCTCAGCAGAGGAGGTGTTT...CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGACTCAGCAGTAATGACAGCACACGGCAAGGCTaGGCCCTTTATCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGSMPSVSAGDPGLSSNDSTRQG*ALYQQA
Trigger: GGCCTGCTGATAAAGGGCTCAGCCTTGCCGTGTGCT...GTCATTACTGCTGAGTCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ACCACAAGCGAGAGCCCCTCAGCCAATGAGGTTGCCGTCTTCAATGCGCGGCCCGTCTCCTTCTTCACCTaGCCATCCTCGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: TTSESPSANEVAVFNARPVSFFT*PSSVYS
Trigger: GGAGTACACCGAGGATGGGCAGGTGAAGAAGGAGAC...GGGCCGCGCATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAAGCTGGTCACCCCGCTaGCGGGCAATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKSWSPR*RAITVT
Trigger: GGTCACTGTGATTGCCCGGCAGCGGGGTGACCAGCT...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGCGCGGCCCTCATTGGTaGAAATTAGGTAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQTSHPRSRSAVPGSLAGRGPHW*KLGRRR
Trigger: TCTCCTTCTACCTAATTTTCACCAATGAGGGCCGCG...CCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp GAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGACTCAGCAGTAATGACAGGGGGCTGTTGCCATaGATGACTCCACTGCCATGG +
Preference number: 4 (lower is better)
Translates to: EGSMPSVSAGDPGLSSNDRGLLP*MTPLPW
Trigger: CCATGGCAGTGGAGTCATTCATGGCAACAGCCCCCT...GTCATTACTGCTGAGTCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp TGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGGAGCCACACTGTGGATaGTGTCGGGAGACACCACAA +
Preference number: 4 (lower is better)
Translates to: CVVSCQWAEWLAVPTQSKEPHCG*CRETPQ
Trigger: TTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTC...CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACCAGGTGTCGGGCGGGTaGCAGGGTCTTTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNQVSGG*QGLFTP
Trigger: TGGAGTGAAAAGACCCTGGCACCCGCCCGACACCTG...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCTTGCCATTCATGAGCTaGTGCTGCCCACCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVLPFMS*CCPPKL
Trigger: CAGCTTTGGTGGGCAGCAGCAGCTCATGAATGGCAA...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGTTGCCGTCTTCAATTCCGGAGCCACACTGTaGATGCTGTCGGGAGACACC +
Preference number: 4 (lower is better)
Translates to: SGDTTSESPSANEVAVFNSGATL*MLSGDT
Trigger: GGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGA...ATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp TGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGCTCCAACTTTTTGGCTaGCACCCGTGTCCGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CVVSCQWAEWLAVPTQSKLQLFG*HPCPSN
Trigger: GTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAG...CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTGCTCTGGCATGGAGCTaGGTCAGAGGTGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTALAWS*VRGERG
Trigger: TCCTCTCTCACCTCTGACCCAGCTCCATGCCAGAGC...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACTGCCAATGGGCTGAGTaGCTGGCCGTACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNCQWAE*LAVPTQ
Trigger: CTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCA...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCCACAGATGTGCTTGGTaGTGGTGGCAAAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVHRCAW*WWQSMA
Trigger: TGCCATGCTTTGCCACCACCACCAAGCACATCTGTG...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGCAGCTGCCAATGGGCTaGGTGGCTGGCCGTACCCAC +
Preference number: 4 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMQLPMG*VAGRTH
Trigger: GTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTG...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCAAGGCGCCAATGATGTaGACCAGCCTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVKAPMM*TSLPSF
Trigger: GAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTT...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCAAGGCGCCAATGATGTaGACCAGCCTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: HEPHKHPTRGLAQPFQEAKAPMM*TSLPSF
Trigger: GAATGAAGGAAGGCTGGTGCACATCATTGGCGCCTT...GGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCTATCCCCAGACTTGGTaGAGAATGGGACTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVYPQTW*RMGLAG
Trigger: ACCAGCTAGTCCCATTCTCCACCAAGTCTGGGGATA...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGCCGGGGCTCCTGCTCTaGCATGGAGCTGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMPGLLL*HGAGSE
Trigger: CTCTGACCCAGCTCCATGCCAGAGCAGGAGCCCCGG...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAACATGCTGCCAAGTCTaGCCCCTGAAGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKTCCQV*PLKRRG
Trigger: CCCTCTCCTCTTCAGGGGCCAGACTTGGCAGCATGT...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGTTGTCAGCTGCCAATaGGCTGAGTGGCTGGCCGTA +
Preference number: 4 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKVVSCQ*AEWLAV
Trigger: TACGGCCAGCCACTCAGCCCATTGGCAGCTGACAAC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CACAGCCGGAAGATGGACCCCATAGTTTGGATCAGACAAAAGCTTGGATGTCCGTTGGATTCGCGGCCATaGTGGGACCCGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: HSRKMDPIVWIRQKLGCPLDSRP*WDPARC
Trigger: GCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAA...CGGACATCCAAGCTTTTGTCTGATCCAAACTATGGGGTCCATCTTCCGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp TTGGTACATCTCCACGTGCCTCCGCAGTTTCACAGCCGGAAGATGGACCCCATAGAGCCCCTCAGCCAATaGGGTTGCCGTCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: LVHLHVPPQFHSRKMDPIEPLSQ*GCRLQC
Trigger: GCATTGAAGACGGCAACCTCATTGGCTGAGGGGCTC...TATGGGGTCCATCTTCCGGCTGTGAAACTGCGGAGGCACGTGGAGATGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp TGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGCTTTCAGGCCAATGTTaGCCAGGTCTCGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: CVVSCQWAEWLAVPTQSKLSGQC*PGLGKQ
Trigger: CTGTTTTCCGAGACCTGGTCAACATTGGCCTGAAAG...CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTGACGGGGCGTCACCATaGAGGAGCCCATTTAGTATA +
Preference number: 4 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTDGASP*RSPFSI
Trigger: TATACTAAATGGGCTCCTTCATGGTGACGCCCCGTC...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGGAAAGCACTCCCAGGTaGAAGCAGCCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: HRCAWWWWQSMALVCSDEESTPR*KQPGRR
Trigger: ACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTC...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp AAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGAGCTAGTGGATGGGTATCTTaGCAGCTTCCAGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: KHPTRGLAQPFQEAWLGASGWVS*QLPGFG
Trigger: TCCAAAACCTGGAAGCTGTCAAGATACCCATCCACT...AGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp GAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAGGAGAAGTGGTACATCTCCACGTaGCTCCGCAGTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: EWLAVPTQSKRGRKQQEKWYIST*LRSFTA
Trigger: GGCTGTGAAACTGCGGAGGCACGTGGAGATGTACCA...CTTCTCCTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CACTGTGGATGCTGTCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGTCCAGGAAGCCTGGCTaGGAGCTGGTTTTAACTTTG +
Preference number: 4 (lower is better)
Translates to: HCGCCRETPQARAPQPMRSRKPG*ELVLTL
Trigger: CAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGA...CCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp TCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGTTGCCGTCTTCAATCCTCGGTGTACTCCCTaGACTCCTCAGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: SGDTTSESPSANEVAVFNPRCTP*TPQFLP
Trigger: GGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGG...ATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCCCACCTCTGGATACTTaGGATTTTCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVPPLDT*DFRCGR
Trigger: TCTACCACAGCGAAAATCCCAAGTATCCAGAGGTGG...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACGCTGAGAAGTCCCCGTaGTGCAGGAGCAGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNAEKSP*CRSSKV
Trigger: TACCTTACTGCTCCTGCACCACGGGGACTTCTCAGC...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp TCGTCTCCTTCTTCACCTGCCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTGAGCCACACTGTGGATaGTGTCGGGAGACACCACAA +
Preference number: 4 (lower is better)
Translates to: SSPSSPAHPRCTPWTPQFEPHCG*CRETPQ
Trigger: TTGTGGTGTCTCCCGACAGCATCCACAGTGTGGCTC...AAACTGAGGAGTCCAGGGAGTACACCGAGGATGGGCAGGTGAAGAAGGAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp ATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCGTGGTACATCTCCACGTaGCTCCGCAGTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: MMCTSLPSFSGATLWMLSWYIST*LRSFTA
Trigger: GGCTGTGAAACTGCGGAGGCACGTGGAGATGTACCA...CGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACCCATTCATGAGCTGCTaGTGCCCACCAAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNPFMSC*CPPKLL
Trigger: AAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAATGG...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCGAGTTACCTCCCCCTGTaGCCAGTGTTTCTGCGCATG +
Preference number: 4 (lower is better)
Translates to: MMCTSLPSFSGATLWMLSSYLPL*PVFLRM
Trigger: CATGCGCAGAAACACTGGGCACAGGGGGAGGTAACT...CGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp ACACCACATCAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTGCTTTGAGAAGTGGGCTGACGACTaGAGCGTGGTGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TPHQVLATDLCFGCACFEKWADD*SVVSSG
Trigger: GCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTT...CTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTGATGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCAATAATTCGCGGCCATaGTGGGACCCGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLNNSRP*WDPARC
Trigger: GCAGCGAGCCGGGTCCCACCATGGCCGCGAATTATT...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTCCAGGAAGCCTGGCTaGGAGCTGGTTTTAACTTTG +
Preference number: 4 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTSRKPG*ELVLTL
Trigger: CAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGA...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGACTCAGCAGTAATGACAGGTATCCCCAGACTTaGTGGAGAATGGGACTAGCT +
Preference number: 4 (lower is better)
Translates to: EGSMPSVSAGDPGLSSNDRYPQT*WRMGLA
Trigger: AGCTAGTCCCATTCTCCACCAAGTCTGGGGATACCT...GTCATTACTGCTGAGTCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
3UTR CAA 72 bp CTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCCATaGGTACATCTCCACGTGCCTCCGCAGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LGVLPGLLSFYP*VHLHVPPQFHS
Trigger: GCTGTGAAACTGCGGAGGCACGTGGAGATGTACCAATGGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp CCACCCGAGGTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGAGCTGGTTTTAGCTGTTGATGATTTCTaGCCTCCATTCAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PPEVSLSRSRKPGWELVLAVDDF*PPFSVV
Trigger: TACAACACTGAATGGAGGTCAGAAATCATCAACAGC...TAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGAGTAGGAAAGTACACATaGAGCAGCAAAGTAACGAAG +
Preference number: 4 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGVGKYT*SSKVTK
Trigger: CTTCGTTACTTTGCTGCTTCATGTGTACTTTCCTAC...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCTGCTCTGAATTCAACTaGCAGACTAAAGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVCSEFN*QTKGCF
Trigger: GAAACACCCTTTAGTCTGTCAGTTGAATTCAGAGCA...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGGTCTCCTTCTTCACCTaGCCATCCTCGGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: HRCAWWWWQSMALVCSDEVSFFT*PSSVYS
Trigger: GGAGTACACCGAGGATGGGCAGGTGAAGAAGGAGAC...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACAGCATGGCACTTGTGTaGAGTGATGAGAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNSMALV*SDEKQH
Trigger: GTGCTGCTTCTCATCACTGCACACAAGTGCCATGCT...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TGCCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCCATTGGTACATCTGTTCAGCTAGGAAGTaGGCTGACGACTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: CPSSVYSLDSSVSTHWYICSARK*ADDWSV
Trigger: CACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACA...GATGTACCAATGGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGGATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp CCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCGGGAGACACCATCAGTTTCTACCCATTaGTACATCTCCACGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PAFLHSPEPHCGCCRETPSVSTH*YISTCL
Trigger: GAGGCACGTGGAGATGTACCAATGGGTAGAAACTGA...TGGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp GAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAGGAGAAGATAGGCTCAGGGACTTaGAGTTGTCGACTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: EWLAVPTQSKRGRKQQEKIGSGT*SCRLCR
Trigger: TCGACAAAGTCGACAACTTCAAGTCCCTGAGCCTAT...CTTCTCCTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGGTTTCAGAAGTTCTaGCCCCTTATTCAGCTACCA +
Preference number: 4 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTWFQKF*PLIQLP
Trigger: TGGTAGCTGAATAAGGGGTCAGAACTTCTGAAACCA...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCGGTTGCCGTCTTCAATaGGCGGCCCTCATTGGTGAA +
Preference number: 4 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLGCRLQ*AALIGE
Trigger: TTCACCAATGAGGGCCGCGCATTGAAGACGGCAACC...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCTGTTTTGGGTGTGCCTaGTTTGAGGGGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLCFGCA*FEGSMP
Trigger: GGGCATGGACCCCTCAAAGCAGGCACACCCAAAACA...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GGCCATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAATTGGACTCAGAGCACTaGTTTTGCAATTCATTCATG +
Preference number: 4 (lower is better)
Translates to: GHEPHKHPTRGLAQPFQELDSEH*FCNSFM
Trigger: CATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAA...TTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGCCTCGGTGTACTCCCTaGACTCCTCAGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMPRCTP*TPQFLP
Trigger: GGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGG...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGTACATCTCCACGTGCCTCCGCAGTTTCACAGCCGGAAGATGGACCCCATAGTTTCTGCCCAGCTTCTTaGACTCAGAGCACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTSPRASAVSQPEDGPHSFCPAS*TQSTAF
Trigger: AAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAA...ACTATGGGGTCCATCTTCCGGCTGTGAAACTGCGGAGGCACGTGGAGATGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CAA 72 bp TCCGCAGTTTCACAGCCGGAAGATGGACCCCATAGTTaGGATCAGACAAAAGCTTGGATGTCCGTAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SAVSQPEDGPHS*DQTKAWMSVRR
Trigger: GCGCCTTACGGACATCCAAGCTTTTGTCTGATCCAAACTATGGGGTCCATCTTCCGGCTGTGAAACTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGGTTCTTGATTGTGGTTaGCGGGGCGTCACCATGAAG +
Preference number: 4 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMVLDCG*RGVTMK
Trigger: CTTCATGGTGACGCCCCGTCAACCACAATCAAGAAC...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CACTGTGGATGCTGTCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGGTAGTATTCCATTTATaGCTATACCACAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCGCCRETPQARAPQPMRVVFHL*LYHSVL
Trigger: CAGCACACTGTGGTATAGTCATAAATGGAATACTAC...CCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR GCA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGTTCATGAGCTGCTGCTaGCCACCAAAGCTGCTTACT +
Preference number: 4 (lower is better)
Translates to: HRCAWWWWQSMALVCSDEFMSCC*PPKLLT
Trigger: AGTAAGCAGCTTTGGTGGGCAGCAGCAGCTCATGAA...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTATGGACCCCATAGTTTaGATCAGACAAAAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTMDPIV*IRQKLG
Trigger: TCCAAGCTTTTGTCTGATCCAAACTATGGGGTCCAT...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CATCGAAAGCACTCCCAGGTGAAAGCAGCCAGGCAGGCGTGGGCATTGTACAACGCTGTTGATGATTTCTaGCCTCCATTCAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: HRKHSQVKAARQAWALYNAVDDF*PPFSVV
Trigger: TACAACACTGAATGGAGGTCAGAAATCATCAACAGC...GTTGTACAATGCCCACGCCTGCCTGGCTGCTTTCACCTGGGAGTGCTTTCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGGGCCAGGCCGGCAATaGGGAGGGCCCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLILVSKASIVKLLSDTKGPGRQ*GGPTGV
Trigger: GACCCCTGTGGGCCCTCCTCATTGCCGGCCTGGCCC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ACTTTTTATCAATCAAACCACATACCCCAATTTAACACCTTTCAGTGCTCTGAATGGGACCCGGCTCGCTaGCGCCGCCTCGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TFYQSNHIPQFNTFQCSEWDPAR*RRLALF
Trigger: GAACAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCCA...TTCAGAGCACTGAAAGGTGTTAAATTGGGGTATGTGGTTTGATTGATAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGGATCAGACAAAAGCTTaGATGTCCGTAAGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: HRCAWWWWQSMALVCSDEDQTKA*MSVRRQ
Trigger: TTGGCGCCTTACGGACATCCAAGCTTTTGTCTGATC...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TGCCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCCATTGGTACATCGATCAGACAAAAGCTTaGATGTCCGTAAGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: CPSSVYSLDSSVSTHWYIDQTKA*MSVRRQ
Trigger: TTGGCGCCTTACGGACATCCAAGCTTTTGTCTGATC...GATGTACCAATGGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
3UTR CAA 72 bp CGTTCCAGGAAGCCTGGCTGGGAGCTGGTTTTAACTTaGACATGTTCTCTCCGGGTACTGGTACTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RSRKPGWELVLT*TCSLRVLVLEY
Trigger: GTATTCCAGTACCAGTACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp ATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAAAAACCTGCCAATTTaGACAAAGGGGGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ITDVLGGGGKAWHLCAVMKNLPI*TKGAVA
Trigger: GGCAACAGCCCCCTTTGTCCAAATTGGCAGGTTTTT...CATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCCAAGTCTCCCACCTCTaGATACTTGGGATTTTCGCT +
Preference number: 4 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLQVSHL*ILGIFA
Trigger: AGCGAAAATCCCAAGTATCCAGAGGTGGGAGACTTG...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCTATGGACACAACACGTaGAAGAACCACTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLYGHNT*KNHSEA
Trigger: TGCTTCTGAGTGGTTCTTTCACGTGTTGTGTCCATA...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGAACTTAGAAATTCTGTaGCTTAGGTGTGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: HRCAWWWWQSMALVCSDENLEIL*LRCGWI
Trigger: GATCCACCCACACCTAAGTCACAGAATTTCTAAGTT...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp TCCTTCTTCACCTGCCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCTCAGAGCACTGCTTTTaGAATTCATTCATGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SFFTCPSSVYSLDSSVSTSEHCF*NSFMLW
Trigger: CCACAACATGAATGAATTGCAAAAGCAGTGCTCTGA...GGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGGATGGGCAGGTGAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp AACTTTGACATGTTCTCTCCGGGTACTGGTACTGGAATACGTAGATTAGTTTGTCTTCGAAAATCCGCGTaGACTCCAGGGCCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: NFDMFSPGTGTGIRRLVCLRKSA*TPGPSG
Trigger: CCCGCTTGGCCCTGGAGTCCACGCGGATTTTCGAAG...ACAAACTAATCTACGTATTCCAGTACCAGTACCCGGAGAGAACATGTCAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp ACGAAGAAAAACTTAAATAGGGCCTTCAGAGATCCCACACACTACAAAGATTCTCTGACGACTGGAGCGTaGTGTCCAGCGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TKKNLNRAFRDPTHYKDSLTTGA*CPAASC
Trigger: GCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAG...AGAATCTTTGTAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGTTTTTCTTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTAATTCGCGGCCATGGTaGGACCCGGCTCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITNSRPW*DPARCR
Trigger: GCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATT...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCATGGACCCCATAGTTTaGATCAGACAAAAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NDVHQPSFILRSHTVDAVMDPIV*IRQKLG
Trigger: TCCAAGCTTTTGTCTGATCCAAACTATGGGGTCCAT...GACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTAATGGGCTGAGTGGCTaGCCGTACCCACTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSNGLSG*PYPLSP
Trigger: TGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATT...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTTGTTCAGCTAGGAAGTaGGCTGACGACTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSCSARK*ADDWSV
Trigger: CACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACA...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTATCCGGAGCCACACTGTaGATGCTGTCGGGAGACACC +
Preference number: 4 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLSGATL*MLSGDT
Trigger: GGTGTCTCCCGACAGCATCCACAGTGTGGCTCCGGA...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAGCAGCCAGGCAGGCGTaGGCATTGTACAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLAARQA*ALYNQP
Trigger: AGGCTGGTTGTACAATGCCCACGCCTGCCTGGCTGC...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ACGAAGAAAAACTTAAATAGGGCCTTCAGAGATCCCACACACTACAAAGATTCTTGCAGAGTCCAAAATTaGCCGGGGCTCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TKKNLNRAFRDPTHYKDSCRVQN*PGLLLW
Trigger: CCAGAGCAGGAGCCCCGGTCAATTTTGGACTCTGCA...AGAATCTTTGTAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGTTTTTCTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTTGTCCAGCGGCCTCTTaGCAGCCCCAGCTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSCPAAS*QPQLRK
Trigger: TTTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACA...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACCCAACCTGGTGCACATaGTGCCAAGTCTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNPTWCT*CQVWPL
Trigger: CAGGGGCCAGACTTGGCAGCATGTGCACCAGGTTGG...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTGGCCCCAGGTCTTCATaGAGTTGCTCCTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSGPRSS*SCSLVL
Trigger: GAGAACTAAGGAGCAACTCCATGAAGACCTGGGGCC...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ACACCACATCAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTGCTTTGAGCCAGATAAGTCATCTTaGGCTGGCTGTGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TPHQVLATDLCFGCACFEPDKSS*AGCVFH
Trigger: ATGAAAAACACAGCCAGCCCAAGATGACTTATCTGG...CTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTGATGTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTATCAGCTTGCCATTCATaGGCTGCTGCTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLSACHS*AAAAHQ
Trigger: TTGGTGGGCAGCAGCAGCTCATGAATGGCAAGCTGA...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTTCAGGCCTCAGTTCTTaGTTGTGGTTGACGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSSGLSS*LWLTGR
Trigger: ACGCCCCGTCAACCACAATCAAGAACTGAGGCCTGA...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACACCTGGTGCACATGCTaGCAAGTCTGGCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNTWCTC*QVWPLK
Trigger: CTTCAGGGGCCAGACTTGGCAGCATGTGCACCAGGT...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp ACGAAGAAAAACTTAAATAGGGCCTTCAGAGATCCCACACACTACAAAGATTCTTCCGTAGAGCGTGTCTaGGTTGTCAGCTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: TKKNLNRAFRDPTHYKDSSVERV*VVSCQW
Trigger: CCATTGGCAGCTGACAACGCAGACACGCTCTACGGA...AGAATCTTTGTAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGTTTTTCTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTGAGGATGAAAGCAAGTaGTTTCTCCACCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSEDESK*FLHPLL
Trigger: GAGGAGAGGGTGGAGAAAGCACTTGCTTTCATCCTC...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp AACTTTGACATGTTCTCTCCGGGTACTGGTACTGGAATACGTAGATTAGTTTGTGCACCAACTCCTTTCTaGCCAGCTTCTTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: NFDMFSPGTGTGIRRLVCAPTPF*PASWTQ
Trigger: CTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGC...ACAAACTAATCTACGTATTCCAGTACCAGTACCCGGAGAGAACATGTCAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR TCA 90 bp GGATCTTATTTAGGAAGACTAAAGCTATGGACACAACACGTGAAAGAACCACTCCGCGGCCCTCATTGGTaGAAATTAGGTAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSYLGRLKLWTQHVKEPLRGPHW*KLGRRR
Trigger: TCTCCTTCTACCTAATTTTCACCAATGAGGGCCGCG...GAGTGGTTCTTTCACGTGTTGTGTCCATAGCTTTAGTCTTCCTAAATAAGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACTCCGTAAGGCGCCAATaGTGTGCACCAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNSVRRQ*CAPAFL
Trigger: AAGGAAGGCTGGTGCACATCATTGGCGCCTTACGGA...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTCGAATGATGTCCACATaGGGGTCCTCCAGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSRMMST*GSSSLD
Trigger: ATCCAAGCTGGAGGACCCTCATGTGGACATCATTCG...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTCCTAGGAAGCCCAGGTaGCCACATCGAAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITPRKPR*PHRKHS
Trigger: GGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGG...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTATGACTCCACTGCCATaGCACTGGGGTTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSMTPLP*HWGFCG
Trigger: GCCACAAAAACCCCAGTGCCATGGCAGTGGAGTCAT...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp AGAAACTCATTTATAGCACAGGCACCCCAGGCCAATAGAGATGATTACAGATCTACCAAAGCTGCTTACTaGCAAGAAGAGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RNSFIAQAPQANRDDYRSTKAAY*QEEMWG
Trigger: TCCCCACATCTCTTCTTGCCAGTAAGCAGCTTTGGT...AGATCTGTAATCATCTCTATTGGCCTGGGGTGCCTGTGCTATAAATGAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ACTTTTTATCAATCAAACCACATACCCCAATTTAACACCTTTCAGTGCTCTGAAAGTCTCCACGGCGAATaGTGTCCACATGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFYQSNHIPQFNTFQCSESLHGE*CPHEGP
Trigger: AGGACCCTCATGTGGACATCATTCGCCGTGGAGACT...TTCAGAGCACTGAAAGGTGTTAAATTGGGGTATGTGGTTTGATTGATAAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTTCCGATGCCAGAGGATaGAAGCAAGTGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSSDARG*KQVLSP
Trigger: TGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGA...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTGAGAAGTCCCCGTGGTaGAGGAGCAGTAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITEKSPW*RSSKVS
Trigger: GGATACCTTACTGCTCCTGCACCACGGGGACTTCTC...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAGCTGCCCACCAAAGCTaGTTACTGGCAAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLAAHQS*LLARRD
Trigger: ATCTCTTCTTGCCAGTAAGCAGCTTTGGTGGGCAGC...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACTCCGGGTACTGGTACTaGAATAATTCGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNSGYWY*NNSRPW
Trigger: CCATGGCCGCGAATTATTCCAGTACCAGTACCCGGA...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACCCACTGCCATGGCACTaGGGTTTTTGTGGCCAATCT +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNPLPWH*GFCGQS
Trigger: AGATTGGCCACAAAAACCCCAGTGCCATGGCAGTGG...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTACTCCTTAGTTCTCTATaGAACACCTCCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLLLSSL*NTSSAE
Trigger: CTCAGCAGAGGAGGTGTTTCATAGAGAACTAAGGAG...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTTCAGTTTCTACCCATTaGTACATCTCCACGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSSVSTH*YISTCL
Trigger: GAGGCACGTGGAGATGTACCAATGGGTAGAAACTGA...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGCACTGGGGTTTTTGTaGCCAATCTCTCGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LLILVSKASIVKLLSDTKALGFL*PISRSK
Trigger: CTTCGACCGAGAGATTGGCCACAAAAACCCCAGTGC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTTTCACTCCAACTTTTTaGCTGGCACCCGTGTCCGAG +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITFTPTF*LAPVSE
Trigger: CTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAA...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTTGTCGACTTTGTCGATaGGGCCTGACGAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITCRLCR*GLTRGK
Trigger: TTTTCCTCTCGTCAGGCCTCATCGACAAAGTCGACA...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp GACATGTTCTCTCCGGGTACTGGTACTGGAATACGTAGATTAGTTTGTTTCTTCGTTTCTTCTACAACTTaGGAAAAATGGAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: DMFSPGTGTGIRRLVCFFVSSTT*EKWNQG
Trigger: GCCCTGATTCCATTTTTCTCAAGTTGTAGAAGAAAC...GAAGAAACAAACTAATCTACGTATTCCAGTACCAGTACCCGGAGAGAACATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGTTCTCTCCGGGTACTaGTACTGGAATAATTCGCGG +
Preference number: 4 (lower is better)
Translates to: LLILVSKASIVKLLSDTKVLSGY*YWNNSR
Trigger: CCGCGAATTATTCCAGTACCAGTACCCGGAGAGAAC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAAGATGTGCTTGGTGGTaGTGGCAAAGCATGGCACTT +
Preference number: 4 (lower is better)
Translates to: LLILVSKASIVKLLSDTKRCAWW*WQSMAL
Trigger: AAGTGCCATGCTTTGCCACCACCACCAAGCACATCT...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CCA 90 bp ACTTTTTATCAATCAAACCACATACCCCAATTTAACACCTTTCAGTGCTCTGAAGATCACAGATGTGCTTaGTGGTGGTGGCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: TFYQSNHIPQFNTFQCSEDHRCA*WWWQSM
Trigger: CATGCTTTGCCACCACCACCAAGCACATCTGTGATC...TTCAGAGCACTGAAAGGTGTTAAATTGGGGTATGTGGTTTGATTGATAAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR TCA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACTGTAAAGCTTCTCAGTaGCACAAAATACTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNCKASQ*HKILRG
Trigger: ACCTCTCAGTATTTTGTGTCACTGAGAAGCTTTACA...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR GCA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTAGGTCTTCATGGAGTTaGTCCTTAGTTCTCTATGAA +
Preference number: 4 (lower is better)
Translates to: EVLTPYSATKYLIAKGITRSSWS*SLVLYE
Trigger: TTCATAGAGAACTAAGGAGCAACTCCATGAAGACCT...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 90 bp GGGACCCGGCTCGCTGCCGCCGCCTCGCGCTGTTCAGCTAGGAAGTaGGCTGACGACTGGAGCGTGGTGTCCAGCGGCCTCTTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GTRLAAAASRCSARK*ADDWSVVSSGLLPA
Trigger: GGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS GCA 90 bp CTAGGAAGTGGGCTGACGACTGGAGCGTGGTGTCCAGCGGCCTCTTaGCAGCCCCAGCTTCGAAAATCCGCGTGGACTCCAGGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: LGSGLTTGAWCPAAS*QPQLRKSAWTPGPS
Trigger: GCTTGGCCCTGGAGTCCACGCGGATTTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS-3UTR CAA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGTGTCCAGCGGCCTCTaGCCAGCCCCAGCTTCGAAA +
Preference number: 5 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVVSSGL*PAPASK
Trigger: TTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACAC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 90 bp AGGTGTCGGGCGGGTGCCAGGGTCTTTTCACTCCAACTTTTTGGCTaGCACCCGTGTCCGAGCAACAAGGATGGGCACAAGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RCRAGARVFSLQLFG*HPCPSNKDGHKGQA
Trigger: GGCCTGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 90 bp ACGCAGGTGTCGGGCGGGTGCCAGGGTCTTTTCACTCCAACTTTTTaGCTGGCACCCGTGTCCGAGCAACAAGGATGGGCACAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: TQVSGGCQGLFTPTF*LAPVSEQQGWAQGP
Trigger: TGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACACCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp TGCGTTGTCAGCTGCCAATGGGCTGAGTGGCTGGCCGTACCCACTCAGTCCAAGCCTCAGCCAATGAGGTaGCCGTCTTCAATGCGCGGC +
Preference number: 5 (lower is better)
Translates to: CVVSCQWAEWLAVPTQSKPQPMR*PSSMRG
Trigger: GCCGCGCATTGAAGACGGCAACCTCATTGGCTGAGG...CTTGGACTGAGTGGGTACGGCCAGCCACTCAGCCCATTGGCAGCTGACAACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGTGCAGAGTCCAAAATaGACCGGGGCTCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVVQSPK*TGAPAL
Trigger: CAGAGCAGGAGCCCCGGTCAATTTTGGACTCTGCAC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp TCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGTTGCCGTCTTCAATGTGTCCAGCGGCCTCTaGCCAGCCCCAGCTTCGAAA +
Preference number: 5 (lower is better)
Translates to: SGDTTSESPSANEVAVFNVSSGL*PAPASK
Trigger: TTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACAC...ATTGAAGACGGCAACCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS GCA 90 bp TGGCCATCCAGCCAGCTGCCCGCAGGCCCCAGGTCTTCATGGAGTTaGTCCTTAGTTCTCTATGAAACACCTCCTCTGCTGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: WPSSQLPAGPRSSWS*SLVLYETPPLLRSP
Trigger: GGGACTTCTCAGCAGAGGAGGTGTTTCATAGAGAACTAAGGAGCAACTCCATGAAGACCTGGGGCCTGCGGGCAGCTGGCTGGATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCCTCAGTTTCTACCCATaGGTACATCTCCACGTGCCT +
Preference number: 5 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVLSFYP*VHLHVP
Trigger: AGGCACGTGGAGATGTACCAATGGGTAGAAACTGAG...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGCCATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAACTCAGTTTCTACCCATaGGTACATCTCCACGTGCCT +
Preference number: 5 (lower is better)
Translates to: GHEPHKHPTRGLAQPFQELSFYP*VHLHVP
Trigger: AGGCACGTGGAGATGTACCAATGGGTAGAAACTGAG...TTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp GGAGCTGGGTCAGAGGTGAGAGAGGACCTGGATCCTAGGGCTCACGCAGGTGTCGATAGGCTCAGGGACTaGAAGTTGTCGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: GAGSEVREDLDPRAHAGVDRLRD*KLSTLS
Trigger: CGACAAAGTCGACAACTTCAAGTCCCTGAGCCTATC...GACACCTGCGTGAGCCCTAGGATCCAGGTCCTCTCTCACCTCTGACCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGGTGTGCCTGCTTTGAGGGGTCCATGCCCAGTGTGTCTGCTGGTGACCCAGGAGCTTTCAGGCCAATGTaGACCAGGTCTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: GCACFEGSMPSVSAGDPGAFRPM*TRSRKT
Trigger: TGTTTTCCGAGACCTGGTCAACATTGGCCTGAAAGC...TCCTGGGTCACCAGCAGACACACTGGGCATGGACCCCTCAAAGCAGGCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTGGAGAAGCTGTCAGCTaGCCATTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTGEAVS*PFMSCC
Trigger: GCAGCAGCTCATGAATGGCAAGCTGACAGCTTCTCC...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAATCCGTGTCATAAGGTaGAGGCCCATGAACATGGCC +
Preference number: 5 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKIRVIR*RPMNMA
Trigger: GGCCATGTTCATGGGCCTCAACCTTATGACACGGAT...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAGGAGAAGTTTCACTCCAACTTTTaGGCTGGCACCCGTGTCCGA +
Preference number: 5 (lower is better)
Translates to: EWLAVPTQSKRGRKQQEKFHSNF*AGTRVR
Trigger: TCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAA...CTTCTCCTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGGCAAAGCATGGCACTaGTGTGCAGTGATGAGAAGC +
Preference number: 5 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKGKAWH*CAVMRS
Trigger: GCTTCTCATCACTGCACACAAGTGCCATGCTTTGCC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTGATGGACCCCATAGTTaGGATCAGACAAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTDGPHS*DQTKAW
Trigger: CCAAGCTTTTGTCTGATCCAAACTATGGGGTCCATC...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GAAGGCCATGAGCCCCACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGTCTCGGTCGAAGTTTTaGCTGTTGATGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: EGHEPHKHPTRGLAQPFQSRSKF*LLMISD
Trigger: GTCAGAAATCATCAACAGCAAAAACTTCGACCGAGA...CTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTTTGTGGGGCTCATGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGAAAAACCTGCCAATTaGGACAAAGGGGGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKEKPAN*DKGGCC
Trigger: GCAACAGCCCCCTTTGTCCAAATTGGCAGGTTTTTC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS TCA 90 bp TCAGCGAGGTGGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGTTaGCCAGGTCTCGGAAAACAGGAAACCAGTCCACCAAGGTGTAGA +
Preference number: 5 (lower is better)
Translates to: SARWPHRRQRLSGQC*PGLGKQETSPPRCR
Trigger: TCTACACCTTGGTGGACTGGTTTCCTGTTTTCCGAGACCTGGTCAACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCACCTCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS TCA 90 bp ACTATACCACAGTGTGCTGAATCATTCGTCAGTGGATGGGTATCTTaGCAGCTTCCAGGTTTTGGATTCGCGGCCATGGTGGGACCCGGC +
Preference number: 5 (lower is better)
Translates to: TIPQCAESFVSGWVS*QLPGFGFAAMVGPG
Trigger: GCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATACCCATCCACTGACGAATGATTCAGCACACTGTGGTATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp AATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCGGATCAGACAAAAGCTaGGATGTCCGTAAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: NDVHQPSFILRSHTVDAVGSDKS*DVRKAP
Trigger: TGGCGCCTTACGGACATCCAAGCTTTTGTCTGATCC...GACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CCA 90 bp TCGACTTTGTCGATGAGGCCTGACGAGAGGAAAAACCTGCCAATTTaGACAAAGGGGGCTGTTGCCATGAATGACTCCACTGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: STLSMRPDERKNLPI*TKGAVAMNDSTAMA
Trigger: TGCCATGGCAGTGGAGTCATTCATGGCAACAGCCCCCTTTGTCCAAATTGGCAGGTTTTTCCTCTCGTCAGGCCTCATCGACAAAGTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp AGAAGCAGCCCTAGGAAGCCCAGGTGCCCACATCGAAAGCACTCCCAGGTGAAAGAGCTGGTTTTAACTTaGACATGTTCTCTCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RSSPRKPRCPHRKHSQVKELVLT*TCSLRV
Trigger: TACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTC...TTTCACCTGGGAGTGCTTTCGATGTGGGCACCTGGGCTTCCTAGGGCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GTCTCGCTCAGCCGTTCCAGGAAGCCTGGCTGGGAGCTGGTTTTAACTTTGACAGATGGACCCCATAGTTaGGATCAGACAAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: VSLSRSRKPGWELVLTLTDGPHS*DQTKAW
Trigger: CCAAGCTTTTGTCTGATCCAAACTATGGGGTCCATC...TGTCAAAGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGAGCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp GGCCGCCCTTCAGGATCACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTCTCGGTCGAAGTTTTaGCTGTTGATGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: GRPSGSQMCLVVVAKHGTSRSKF*LLMISD
Trigger: GTCAGAAATCATCAACAGCAAAAACTTCGACCGAGA...AGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTGATCCTGAAGGGCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp CACAGATGTGCTTGGTGGTGGTGGCAAAGCATGGCACTTGTGTGCAGTGATGAGTTGAAGTTGTCGACTTaGTCGATGAGGCCTGACGAG +
Preference number: 5 (lower is better)
Translates to: HRCAWWWWQSMALVCSDELKLST*SMRPDE
Trigger: CTCGTCAGGCCTCATCGACAAAGTCGACAACTTCAA...CTCATCACTGCACACAAGTGCCATGCTTTGCCACCACCACCAAGCACATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp CACTGTGGATGCTGTCGGGAGACACCACAAGCGAGAGCCCCTCAGCCAATGAGGGTGTTTATCAGGAATTaGTTCCTTTTCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HCGCCRETPQARAPQPMRVFIRN*FLFMAE
Trigger: CTCAGCCATGAAAAGGAACAAATTCCTGATAAACAC...CCTCATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS TCA 90 bp GATACTTGGGATTTTCGCTGTGGTAGAAAAAGTCTCCACGGCGAATaGTGTCCACATGAGGGTCCTCCAGCTTGGATAGGCTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: DTWDFRCGRKSLHGE*CPHEGPPAWIGSGT
Trigger: AGTCCCTGAGCCTATCCAAGCTGGAGGACCCTCATGTGGACATCATTCGCCGTGGAGACTTTTTCTACCACAGCGAAAATCCCAAGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp ATAGGGGAGTTTCCGATGCCAGAGGATGAAAGCAAGTGCTTTCTCCACCCTCTCCTCAGGGACTTGAAGTaGTCGACTTTGTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: IGEFPMPEDESKCFLHPLLRDLK*STLSMR
Trigger: CCTCATCGACAAAGTCGACAACTTCAAGTCCCTGAG...GAGAGGGTGGAGAAAGCACTTGCTTTCATCCTCTGGCATCGGAAACTCCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp ACACCACATCAGGTTCTAGCCACAGACTTGTGTTTTGGGTGTGCCTGCTTTGAGGTTCTAGCCACAGACTaGTGTTTTGGGTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TPHQVLATDLCFGCACFEVLATD*CFGCAC
Trigger: GCAGGCACACCCAAAACACAAGTCTGTGGCTAGAAC...CTCAAAGCAGGCACACCCAAAACACAAGTCTGTGGCTAGAACCTGATGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp CCCATCCTCGGTGTACTCCCTGGACTCCTCAGTTTCTACCCATTGGTACATCTCGAGCTGGTTTTAACTTaGACATGTTCTCTCCGGGTA +
Preference number: 5 (lower is better)
Translates to: PILGVLPGLLSFYPLVHLELVLT*TCSLRV
Trigger: TACCCGGAGAGAACATGTCAAAGTTAAAACCAGCTC...GAGATGTACCAATGGGTAGAAACTGAGGAGTCCAGGGAGTACACCGAGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp GAGTGGCTGGCCGTACCCACTCAGTCCAAGAGAGGAAGGAAACAGCAGGAGAAGTCGAAGTTTTTGCTGTaGATGATTTCTGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: EWLAVPTQSKRGRKQQEKSKFLL*MISDLH
Trigger: ATGGAGGTCAGAAATCATCAACAGCAAAAACTTCGA...CTTCTCCTGCTGTTTCCTTCCTCTCTTGGACTGAGTGGGTACGGCCAGCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp ATGATGTGCACCAGCCTTCCTTCATTCTCCGGAGCCACACTGTGGATGCTGTCGCTCAGAGCACTGCTTTaGCAATTCATTCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: MMCTSLPSFSGATLWMLSLRALL*QFIHVV
Trigger: CACAACATGAATGAATTGCAAAAGCAGTGCTCTGAG...CGACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS GCA 90 bp CAGGGCACCAACTCCTTTCTGCCCAGCTTCTTGGACTCAGAGCACTaGTTTTGCAATTCATTCATGTTGTGGTGTTTATCAGGAATTTGT +
Preference number: 5 (lower is better)
Translates to: QGTNSFLPSFLDSEH*FCNSFMLWCLSGIC
Trigger: ACAAATTCCTGATAAACACCACAACATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CCA 90 bp GAGAAAAATGGAATCAGGGCACCAACTCCTTTCTGCCCAGCTTCTTaGACTCAGAGCACTGCTTTTGCAATTCATTCATGTTGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: EKNGIRAPTPFCPAS*TQSTAFAIHSCCGV
Trigger: AACACCACAACATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGCCCTGATTCCATTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp CAGCCGGAAGATGGACCCCATAGTTTGGATCAGACAAAAGCTTGGATGTCCGTATCGAAGTTTTTGCTGTaGATGATTTCTGACCTCCAT +
Preference number: 5 (lower is better)
Translates to: QPEDGPHSLDQTKAWMSVSKFLL*MISDLH
Trigger: ATGGAGGTCAGAAATCATCAACAGCAAAAACTTCGA...TACGGACATCCAAGCTTTTGTCTGATCCAAACTATGGGGTCCATCTTCCGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp TATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTAAACCTCAGGCCTCAGTTCTaGATTGTGGTTGACGGGGCG +
Preference number: 5 (lower is better)
Translates to: YMSSFSPQDIFSVSSLLNLRPQF*IVVDGA
Trigger: CGCCCCGTCAACCACAATCAAGAACTGAGGCCTGAG...GTTTAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS GCA 90 bp CTTCTACAACTTGAGAAAAATGGAATCAGGGCACCAACTCCTTTCTaGCCAGCTTCTTGGACTCAGAGCACTGCTTTTGCAATTCATTCA +
Preference number: 5 (lower is better)
Translates to: LLQLEKNGIRAPTPF*PASWTQSTAFAIHS
Trigger: TGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGCCCTGATTCCATTTTTCTCAAGTTGTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS-3UTR CAA 90 bp ACCAAATACTTAATTGCTAAAGGAATTACTCCCAGCAGGCACAAAACGGTTTCTAAGGTATCCCCAGACTaGGTGGAGAATGGGACTAGC +
Preference number: 5 (lower is better)
Translates to: TKYLIAKGITPSRHKTVSKVSPD*VENGTS
Trigger: GCTAGTCCCATTCTCCACCAAGTCTGGGGATACCTT...AGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTAGCAATTAAGTATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp CAGTATATGTCCAGCTTTTCTCCTCAGGACATCTTCAGTGTTTCTTCTCTTTTACCACAGACTTGTGTTTaGGGTGTGCCTGCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: QYMSSFSPQDIFSVSSLLPQTCV*GVPALR
Trigger: CCTCAAAGCAGGCACACCCAAAACACAAGTCTGTGG...TAAAAGAGAAGAAACACTGAAGATGTCCTGAGGAGAAAAGCTGGACATATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAATGGCACTGGGGTTTTaGTGGCCAATCTCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: LLILVSKASIVKLLSDTKMALGF*WPISRS
Trigger: CGACCGAGAGATTGGCCACAAAAACCCCAGTGCCAT...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp TTGCTGATACTTGTTTCAAAAGCATCCATTGTAAAGCTTCTCAGTGACACAAAAGGATCAGACAAAAGCTaGGATGTCCGTAAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LLILVSKASIVKLLSDTKGSDKS*DVRKAP
Trigger: TGGCGCCTTACGGACATCCAAGCTTTTGTCTGATCC...TTTTGTGTCACTGAGAAGCTTTACAATGGATGCTTTTGAAACAAGTATCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS-3UTR CAA 90 bp GAAGTTCTGACCCCTTATTCAGCTACCAAATACTTAATTGCTAAAGGAATTACTGGATCACAGATGTGCTaGGTGGTGGTGGCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: EVLTPYSATKYLIAKGITGSQMC*VVVAKH
Trigger: ATGCTTTGCCACCACCACCAAGCACATCTGTGATCC...AGTAATTCCTTTAGCAATTAAGTATTTGGTAGCTGAATAAGGGGTCAGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 72 bp CTCGCTGCCGCCGCCTCGCGCTGTTCAGCTAGGAAGTaGGCTGACGACTGGAGCGTGGTGTCCAGCGGCCTC +
Preference number: 6 (lower is better)
Translates to: LAAAASRCSARK*ADDWSVVSSGL
Trigger: GAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACAGCGCGAGGCGGCGGCAGCGAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS CCA 72 bp GCCTCGCGCTGTTCAGCTAGGAAGTGGGCTGACGACTaGAGCGTGGTGTCCAGCGGCCTCTTGCCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: ASRCSARKWADD*SVVSSGLLPAP
Trigger: TGGGGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACAGCGCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS CCA 72 bp TCCGGGTACTGGTACTGGAATAATTCGCGGCCATGGTaGGACCCGGCTCGCTGCCGCCGCCTCGCGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SGYWYWNNSRPW*DPARCRRLALF
Trigger: GAACAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATTATTCCAGTACCAGTACCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 72 bp CTTGACAGCTTCCAGGTTTTGGATTCGCGGCCATGGTaGGACCCGGCTCGCTGCCGCCGCCTCGCGCTGTTC +
Preference number: 6 (lower is better)
Translates to: LDSFQVLDSRPW*DPARCRRLALF
Trigger: GAACAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS GCA 72 bp GGGCTGACGACTGGAGCGTGGTGTCCAGCGGCCTCTTaGCAGCCCCAGCTTCGAAAATCCGCGTGGACTCCA +
Preference number: 6 (lower is better)
Translates to: GLTTGAWCPAAS*QPQLRKSAWTP
Trigger: TGGAGTCCACGCGGATTTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS CCA 72 bp TATCTTGACAGCTTCCAGGTTTTGGATTCGCGGCCATaGTGGGACCCGGCTCGCTGCCGCCGCCTCGCGCTG +
Preference number: 6 (lower is better)
Translates to: YLDSFQVLDSRP*WDPARCRRLAL
Trigger: CAGCGCGAGGCGGCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 90 bp GCTAGGAAGTGGGCTGACGACTGGAGCGTGGTGTCCAGCGGCCTCTaGCCAGCCCCAGCTTCGAAAATCCGCGTGGACTCCAGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: ARKWADDWSVVSSGL*PAPASKIRVDSRAK
Trigger: CTTGGCCCTGGAGTCCACGCGGATTTTCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS CCA 72 bp GCTGTTCAGCTAGGAAGTGGGCTGACGACTGGAGCGTaGTGTCCAGCGGCCTCTTGCCAGCCCCAGCTTCGA +
Preference number: 6 (lower is better)
Translates to: AVQLGSGLTTGA*CPAASCQPQLR
Trigger: TCGAAGCTGGGGCTGGCAAGAGGCCGCTGGACACCACGCTCCAGTCGTCAGCCCACTTCCTAGCTGAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306077.5
ENST00000432444.1
CDS CCA 72 bp GCCAGCCAGCCGCCACGGTCAGCAGGGTCAGCGAGGTaGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGT +
Preference number: 6 (lower is better)
Translates to: ASQPPRSAGSAR*PHRRQRLSGQC
Trigger: ACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCACCTCGCTGACCCTGCTGACCGTGGCGGCTGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CAA 90 bp CACGCAGGTGTCGGGCGGGTGCCAGGGTCTTTTCACTCCAACTTTTaGGCTGGCACCCGTGTCCGAGCAACAAGGATGGGCACAAGGGCC +
Preference number: 6 (lower is better)
Translates to: HAGVGRVPGSFHSNF*AGTRVRATRMGTRA
Trigger: GGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACACCTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 72 bp CGTGGTGCAGGAGCAGTAAGGTATCCCCAGACTTGGTaGAGAATGGGACTAGCTGGTCACCCCGCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: RGAGAVRYPQTW*RMGLAGHPAAG
Trigger: CCCGGCAGCGGGGTGACCAGCTAGTCCCATTCTCCACCAAGTCTGGGGATACCTTACTGCTCCTGCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 72 bp GCGGCCTCTTGCCAGCCCCAGCTTCGAAAATCCGCGTaGACTCCAGGGCCAAGCGGGACTTACTGCAGTTAC +
Preference number: 6 (lower is better)
Translates to: AASCQPQLRKSA*TPGPSGTYCSY
Trigger: GTAACTGCAGTAAGTCCCGCTTGGCCCTGGAGTCCACGCGGATTTTCGAAGCTGGGGCTGGCAAGAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS GCA 72 bp AAATCCGCGTGGACTCCAGGGCCAAGCGGGACTTACTaGAGTTACCTCCCCCTGTGCCCAGTGTTTCTGCGC +
Preference number: 6 (lower is better)
Translates to: KSAWTPGPSGTY*SYLPLCPVFLR
Trigger: GCGCAGAAACACTGGGCACAGGGGGAGGTAACTGCAGTAAGTCCCGCTTGGCCCTGGAGTCCACGCGGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CCA 72 bp CGTCAGTGGATGGGTATCTTGACAGCTTCCAGGTTTTaGATTCGCGGCCATGGTGGGACCCGGCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: RQWMGILTASRF*IRGHGGTRLAA
Trigger: GGCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATACCCATCCACTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 72 bp GTCGGGCGGGTGCCAGGGTCTTTTCACTCCAACTTTTaGGCTGGCACCCGTGTCCGAGCAACAAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: VGRVPGSFHSNF*AGTRVRATRMG
Trigger: GCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CAA 90 bp CTGAATCATTCGTCAGTGGATGGGTATCTTGACAGCTTCCAGGTTTaGGATTCGCGGCCATGGTGGGACCCGGCTCGCTGCCGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: LNHSSVDGYLDSFQV*DSRPWWDPARCRRL
Trigger: GAGGCGGCGGCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATACCCATCCACTGACGAATGATTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS GCA 72 bp ACCTGGATCCTAGGGCTCACGCAGGTGTCGGGCGGGTaGCAGGGTCTTTTCACTCCAACTTTTTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: TWILGLTQVSGG*QGLFTPTFWLA
Trigger: TGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACACCTGCGTGAGCCCTAGGATCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CCA 72 bp TCGGGCGGGTGCCAGGGTCTTTTCACTCCAACTTTTTaGCTGGCACCCGTGTCCGAGCAACAAGGATGGGCA +
Preference number: 6 (lower is better)
Translates to: SGGCQGLFTPTF*LAPVSEQQGWA
Trigger: TGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CAA 72 bp TCGTCAGTGGATGGGTATCTTGACAGCTTCCAGGTTTaGGATTCGCGGCCATGGTGGGACCCGGCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSVDGYLDSFQV*DSRPWWDPARC
Trigger: GCAGCGAGCCGGGTCCCACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATACCCATCCACTGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CCA 72 bp GCGGGTGCCAGGGTCTTTTCACTCCAACTTTTTGGCTaGCACCCGTGTCCGAGCAACAAGGATGGGCACAAG +
Preference number: 6 (lower is better)
Translates to: AGARVFSLQLFG*HPCPSNKDGHK
Trigger: CTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS CAA 72 bp GGGTCCTCCAGCTTGGATAGGCTCAGGGACTTGAAGTaGTCGACTTTGTCGATGAGGCCTGACGAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: GSSSLDRLRDLK*STLSMRPDERK
Trigger: TTTCCTCTCGTCAGGCCTCATCGACAAAGTCGACAACTTCAAGTCCCTGAGCCTATCCAAGCTGGAGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS TCA 72 bp TGGCCACACAGAAGGCAAAGGCTTTCAGGCCAATGTTaGCCAGGTCTCGGAAAACAGGAAACCAGTCCACCA +
Preference number: 6 (lower is better)
Translates to: WPHRRQRLSGQC*PGLGKQETSPP
Trigger: TGGTGGACTGGTTTCCTGTTTTCCGAGACCTGGTCAACATTGGCCTGAAAGCCTTTGCCTTCTGTGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS TCA 72 bp GATTTTCGCTGTGGTAGAAAAAGTCTCCACGGCGAATaGTGTCCACATGAGGGTCCTCCAGCTTGGATAGGC +
Preference number: 6 (lower is better)
Translates to: DFRCGRKSLHGE*CPHEGPPAWIG
Trigger: GCCTATCCAAGCTGGAGGACCCTCATGTGGACATCATTCGCCGTGGAGACTTTTTCTACCACAGCGAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS TCA 72 bp CAGTGTGCTGAATCATTCGTCAGTGGATGGGTATCTTaGCAGCTTCCAGGTTTTGGATTCGCGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: QCAESFVSGWVS*QLPGFGFAAMV
Trigger: CACCATGGCCGCGAATCCAAAACCTGGAAGCTGTCAAGATACCCATCCACTGACGAATGATTCAGCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 72 bp AGCTTGGATAGGCTCAGGGACTTGAAGTTGTCGACTTaGTCGATGAGGCCTGACGAGAGGAAAAACCTGCCA +
Preference number: 6 (lower is better)
Translates to: SLDRLRDLKLST*SMRPDERKNLP
Trigger: TGGCAGGTTTTTCCTCTCGTCAGGCCTCATCGACAAAGTCGACAACTTCAAGTCCCTGAGCCTATCCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306077.5
CDS GCA 72 bp CTTGAGAAAAATGGAATCAGGGCACCAACTCCTTTCTaGCCAGCTTCTTGGACTCAGAGCACTGCTTTTGCA +
Preference number: 6 (lower is better)
Translates to: LEKNGIRAPTPF*PASWTQSTAFA
Trigger: TGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGCCCTGATTCCATTTTTCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CCA 72 bp GGAATCAGGGCACCAACTCCTTTCTGCCCAGCTTCTTaGACTCAGAGCACTGCTTTTGCAATTCATTCATGT +
Preference number: 6 (lower is better)
Translates to: GIRAPTPFCPAS*TQSTAFAIHSC
Trigger: ACATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGGCAGAAAGGAGTTGGTGCCCTGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 90 bp CCCAGCTTCTTGGACTCAGAGCACTGCTTTTGCAATTCATTCATGTaGTGGTGTTTATCAGGAATTTGTTCCTTTTCATGGCTGAGTAGT +
Preference number: 6 (lower is better)
Translates to: PSFLDSEHCFCNSFM*WCLSGICSFSWLSS
Trigger: ACTACTCAGCCATGAAAAGGAACAAATTCCTGATAAACACCACAACATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAAGAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 90 bp GGTACTGGTACTGGAATACGTAGATTAGTTTGTTTCTTCTACAACTaGAGAAAAATGGAATCAGGGCACCAACTCCTTTCTGCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GTGTGIRRLVCFFYN*RKMESGHQLLSAQL
Trigger: AAGCTGGGCAGAAAGGAGTTGGTGCCCTGATTCCATTTTTCTCAAGTTGTAGAAGAAACAAACTAATCTACGTATTCCAGTACCAGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432444.1
CDS CAA 72 bp TTGGACTCAGAGCACTGCTTTTGCAATTCATTCATGTaGTGGTGTTTATCAGGAATTTGTTCCTTTTCATGG +
Preference number: 6 (lower is better)
Translates to: LDSEHCFCNSFM*WCLSGICSFSW
Trigger: CCATGAAAAGGAACAAATTCCTGATAAACACCACAACATGAATGAATTGCAAAAGCAGTGCTCTGAGTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432444.1