RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM234 (Homo sapiens)

Ensembl gene IDs: ENSG00000160055

Ensembl transcript IDs: ENST00000309777.11, ENST00000344461.7, ENST00000373593.5, ENST00000461402.5, ENST00000466796.1, ENST00000483001.5, ENST00000484490.1, ENST00000485689.1, ENST00000487174.1, ENST00000489170.5, ENST00000491434.5, ENST00000495091.5

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTaGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCT +
Preference number: 1 (lower is better)
Translates to: SLASSSLFLRSQHLR*AHRVHCGLLSPPRS
Trigger: AGAACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR CCA 90 bp CTGCCAGCACTTCATGGCCCAGGGGCTTCCTGGAGGCAGCAGAGCTaGAAGTGGGTTCGGCCCACTCAAAGGGTAGACTGTTGCCCCTGG +
Preference number: 1 (lower is better)
Translates to: LPALHGPGASWRQQS*KWVRPTQRVDCCPW
Trigger: CCAGGGGCAACAGTCTACCCTTTGAGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCCATGAAGTGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR GCA 90 bp GTGGGGGTGGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTaGCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: VGVGKHSLVSLGIEE*QASTALSLDKSGWW
Trigger: CCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCCACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR GCA 90 bp GCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTaGCATGTTCCTGCAGGCGTCAGGGGCTCTCTGAAGCCTGAACTG +
Preference number: 1 (lower is better)
Translates to: ARREDVLCEDRRCLL*HVPAGVRGSLKPEL
Trigger: CAGTTCAGGCTTCAGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR TCA 90 bp GATAGTCCAGATCAGGCCACAGTAATGGTGGCTGGGCTGGGAGCCTaGGATGTTAGCAGGAAGAGAGCTGCTGGGGCAGAAAGGTTGCTG +
Preference number: 1 (lower is better)
Translates to: DSPDQATVMVAGLGA*DVSRKRAAGAERLL
Trigger: CAGCAACCTTTCTGCCCCAGCAGCTCTCTTCCTGCTAACATCTCAGGCTCCCAGCCCAGCCACCATTACTGTGGCCTGATCTGGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR GCA 90 bp AGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTaGCACCATGATAGTCCAGATCAGGCCACAGTAATGGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SWPFPCSWSSAVHGT*HHDSPDQATVMVAG
Trigger: CCCAGCCACCATTACTGTGGCCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR CCA 90 bp TGTTGGATCAGGAAACAGTATGTTGGGGTGGGAGGAGCTCTGAGCTaGAAACTGGCAGCCTTGGGCCCCAGGAACAGTTCTCCTCCCTTG +
Preference number: 1 (lower is better)
Translates to: CWIRKQYVGVGGALS*KLAALGPRNSSPPL
Trigger: CAAGGGAGGAGAACTGTTCCTGGGGCCCAAGGCTGCCAGTTTCCAGCTCAGAGCTCCTCCCACCCCAACATACTGTTTCCTGATCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR CCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTaGTGGGAAGAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGAC +
Preference number: 1 (lower is better)
Translates to: EECQASTALSLDKSG*WEEAARREDVLCED
Trigger: GTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR GCA 90 bp TCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGT +
Preference number: 1 (lower is better)
Translates to: SRLHFWLKVCSWPFP*SWSSAVHGTCHHDS
Trigger: ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR GCA 90 bp ATAGGTTGGTCCCTGCTGTTGTTGGGGATGTCCATGGGAGCAGAATaGTCAGACACAAAGCCGGCACTCATCATAACTGTCTCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: IGWSLLLLGMSMGAE*SDTKPALIITVSSC
Trigger: GCAGCTGGAGACAGTTATGATGAGTGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGACATCCCCAACAACAGCAGGGACCAACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR GCA 90 bp TCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTCCATGGAACTGAGCTTGTGATGCAG +
Preference number: 1 (lower is better)
Translates to: SRLHFWLKVCSWPFP*SWSSAVHGTELVMQ
Trigger: CTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR CCA 90 bp TTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGAT +
Preference number: 1 (lower is better)
Translates to: LHFWLKVCSWPFPCS*SSAVHGTCHHDSPD
Trigger: ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR CCA 90 bp AGCTGGAAGTGGGTTCGGCCCACTCAAAGGGTAGACTGTTGCCCCTaGGTCTTACTCACTGAGCTTGTGATGCAGAGTGAAATTCCTATC +
Preference number: 1 (lower is better)
Translates to: SWKWVRPTQRVDCCP*VLLTELVMQSEIPI
Trigger: GATAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGAGTGGGCCGAACCCACTTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR CCA 90 bp TTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGAACTGAGCTTGTGATGCAGAGTGAA +
Preference number: 1 (lower is better)
Translates to: LHFWLKVCSWPFPCS*SSAVHGTELVMQSE
Trigger: TTCACTCTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR TCA 90 bp TTGCTGAGGGTGAGCGTAGAGTCTCCTGTGCTAAATCCCCGCAGCTaGACAGCACTTGAAGGTTACAAAACTCTTTCACTCTTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: LLRVSVESPVLNPRS*TALEGYKTLSLLFS
Trigger: AGAGAACAAGAGTGAAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGCGGGGATTTAGCACAGGAGACTCTACGCTCACCCTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CCA 90 bp AAGCCCAGTGTCCCTTCTCTAGGCCCAAGGCCACAGGGCCCAGGTAACCCAGCCGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 2 (lower is better)
Translates to: KPSVPSLGPRPQGPGNPAGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...GGCTGGGTTACCTGGGCCCTGTGGCCTTGGGCCTAGAGAAGGGACACTGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp AGAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTGGAGGCAGCAGAGCTaGAAGTGGGTTCGGCCCACT +
Preference number: 2 (lower is better)
Translates to: RGAGSEDFCLPHGWGRQGWRQQS*KWVRPT
Trigger: AGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCA...GCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR CAA 90 bp GGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTaGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACAC +
Preference number: 2 (lower is better)
Translates to: GDHYSGHLLSLASSS*FLRSQHLRWAHRVH
Trigger: GTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR-3UTR CCA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGGGCCCAGGGGCTTCCTaGAGGCAGCAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQGPGAS*RQQSWK
Trigger: CTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CCA 90 bp AGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RQQGGRTYFVKTDGVSSATRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...GGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp GCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATAGACAGGGCCCAGGGGCTTCCTaGAGGCAGCAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: AVRISAYLMGGAGKANRQGPGAS*RQQSWK
Trigger: CTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC...CTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
3UTR-3UTR CCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 2 (lower is better)
Translates to: EECQASTALSLDKSGWWEGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...TTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp GAGAGCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCGGAGGAGCTCTGAGCTaGAAACTGGCAGCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: ESWRLAILTAPFCMAFHLGGALS*KLAALG
Trigger: GCCCAAGGCTGCCAGTTTCCAGCTCAGAGCTCCTCC...GAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR TCA 90 bp GACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCTTCCCTTCCTCTaGGCAGAGCAGCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: DHYSGHLLSLASSSLFLRSLPFL*AEQPWL
Trigger: CAGCCAGGGCTGCTCTGCTCAGAGGAAGGGAAGGCT...CCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR-3UTR GCA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EAARREDVLCEDRRCLLCTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp ATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGGGCCCAGGGGCTTCCTaGAGGCAGCAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ISGSKSAAGPFHAAGVLQGPGAS*RQQSWK
Trigger: CTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC...CTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CCA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGACTGCCAGCACTTCATaGCCCAGGGGCTTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQTASTS*PRGFLE
Trigger: CTCCAGGAAGCCCCTGGGCCATGAAGTGCTGGCAGT...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CCA 90 bp GTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTGAGCTGGTACAGGGCTaGAGGAAGGGCTCAGATGGG +
Preference number: 2 (lower is better)
Translates to: VPEASRLHFWLKVCSWPFELVQG*RKGSDG
Trigger: CCCATCTGAGCCCTTCCTCCAGCCCTGTACCAGCTC...AAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR-3UTR TCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGGGGTGGGAGGAGCTCTaGGCTGGAAACTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMGWEEL*AGNWQP
Trigger: AGGCTGCCAGTTTCCAGCTCAGAGCTCCTCCCACCC...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CCA 90 bp ACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCATGCCAGTAGGAGCTaGTACAGGGCTGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TESQRPPVCISGSKSAAGHASRS*YRAGGR
Trigger: CCTTCCTCCAGCCCTGTACCAGCTCCTACTGGCATG...GCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR-3UTR CCA 90 bp CCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCATTCCGGTCCCTGCTGTTGTTaGGGATGTCCATGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PDPSRPFSQEASSPHSHSGPCCC*GCPWEQ
Trigger: CTGCTCCCATGGACATCCCCAACAACAGCAGGGACC...GGAATGAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCCTGGATAAGTCAGGCTaGTGGGAAGAGGCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCLDKSG*WEEAAR
Trigger: CCTTGCTGCCTCTTCCCACCAGCCTGACTTATCCAG...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp TCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACGAGCAGCCCTGGCTGTaGGGGCTATTTCCTTATGGG +
Preference number: 2 (lower is better)
Translates to: SGHLLSLASSSLFLRSQHEQPWL*GLFPYG
Trigger: CCCATAAGGAAATAGCCCCCACAGCCAGGGCTGCTC...GTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR-3UTR TCA 90 bp AAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 2 (lower is better)
Translates to: KANRQLISCICHSDAPSSPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...GGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
3UTR-3UTR TCA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCGGAGGACGTACTTTGTaGAGACAGACGGTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCGGRTL*RQTVSP
Trigger: AGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCC...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR GCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTGGTCCATCCGCTCACTaGCAGCACTTCATGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSGPSAH*QHFMAQ
Trigger: CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACC...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR GCA 90 bp CTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 2 (lower is better)
Translates to: LSPRGLPFAFLAQSLQLAFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...GGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
3UTR-3UTR GCA 90 bp GCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 2 (lower is better)
Translates to: AGGWPYSRLHSVWPSTSSFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...AGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR GCA 90 bp CTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTCATTTCCTGCATCTaGCACTCCGACGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: LSPRGLPFAFLAQSLQLALISCI*HSDAPS
Trigger: AGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAG...GGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
3UTR-3UTR CCA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 2 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR CCA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGAGTTTCTTCCTTCCTTaGGGTTGGGGACCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SARHLLLCPWISQAGGKRSFFLP*GWGPPG
Trigger: GCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACT...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR GCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGCTGGGCATCACCCAGTaGTGCCTCCCCTCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMLGITQ*CLPSLG
Trigger: TCCTAAAGAGGGGAGGCAGCACTGGGTGATGCCCAG...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR GCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGGGAGGTGGTGGGGAATaGAGAACCAGGTTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMGGGGE*RTRFRG
Trigger: TCCCCTGAACCTGGTTCTGCATTCCCCACCACCTCC...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CCA 90 bp TTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCGGGGCTATTTCCTTATaGGATTCTCTGGCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: FVLSLQQLVPQEPAPPLGGAISL*DSLARE
Trigger: TTCTCTGGCCAGAGAATCCCATAAGGAAATAGCCCC...GCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR CAA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTaGGGGATGTCCATGGGAGCAGAATGCTCAGACACAAAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: SQLPFDSDIGWSLLL*GMSMGAECSDTKPA
Trigger: TGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGACATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR GCA 90 bp CTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGACACCATGCCAGCAACTaGTCCTGGGATAATAGGCAG +
Preference number: 2 (lower is better)
Translates to: LKVCSWPFPCSWSSAVHGHHASN*SWDNRQ
Trigger: CTGCCTATTATCCCAGGAGCAGTTGCTGGCATGGTG...TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR-3UTR GCA 90 bp CAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCGGCATCACCCAGTGCTaGCTCCCCTCTTTAGGAGTT +
Preference number: 2 (lower is better)
Translates to: QGGRTYFVKTDGVSSAMFGITQC*LPSLGV
Trigger: AACTCCTAAAGAGGGGAGGCAGCACTGGGTGATGCC...GAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCACAGTAATGGTGGCTaGGCTGGGAGCCTGAGATGT +
Preference number: 2 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSHSNGG*AGSLRC
Trigger: ACATCTCAGGCTCCCAGCCCAGCCACCATTACTGTG...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CCA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
3UTR-3UTR TCA 90 bp TTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 2 (lower is better)
Translates to: FWLKVCSWPFPCSWSSAVKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373593.5
ENST00000491434.5
3UTR-3UTR GCA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp AATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 2 (lower is better)
Translates to: NRQLISCICHSDAPSSLGPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...ACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
3UTR-3UTR CCA 90 bp GCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATTGTTGGGGATGTCCATaGGAGCAGAATGCTCAGACA +
Preference number: 2 (lower is better)
Translates to: AARREDVLCEDRRCLLCHCWGCP*EQNAQT
Trigger: TGTCTGAGCATTCTGCTCCCATGGACATCCCCAACA...ATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR TCA 90 bp CAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 2 (lower is better)
Translates to: QGGRTYFVKTDGVSSAMFKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR TCA 90 bp CTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 2 (lower is better)
Translates to: LTESQRPPVCISGSKSAAACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...AGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373593.5
ENST00000491434.5
3UTR-3UTR TCA 90 bp TGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACTACTCACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 2 (lower is better)
Translates to: CSWPFPCSWSSAVHGTCHYSLSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTA...GTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR-3UTR GCA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGAGACAGCTCATTTCCTaGATCTGCCACTCCGACGCA +
Preference number: 2 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGRQLIS*ICHSDA
Trigger: TGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCT...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
3UTR-3UTR GCA 90 bp CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTCCATGGGAGCAGAATaGTCAGACACAAAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: QVTQPSPKEPDRIKPSAFSMGAE*SDTKPA
Trigger: TGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGA...GAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CCA 90 bp ATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: IDSSFPASATPTHLLPSVSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...AACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
3UTR-3UTR CCA 90 bp CAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QGGRTYFVKTDGVSSAMFSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...GAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR CCA 90 bp GAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTAGTTTCTTCCTTCCTTaGGGTTGGGGACCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: EPDRIKPSAFYARPQQTISFFLP*GWGPPG
Trigger: GCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACT...AATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CAA 90 bp TTGTTAAATGAGGAAGCAGTTCCTAATTTCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGGCTGAGAGCTGGAGGCTGGCCATAC +
Preference number: 2 (lower is better)
Translates to: LLNEEAVPNFQFLPS*GLGTSWLRAGGWPY
Trigger: GTATGGCCAGCCTCCAGCTCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTGGAAATTAGGAACTGCTTCCTCATTTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR TCA 90 bp ACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCTCTTATTGTGATCCATaGGGTAGCTGTTATCCCCAT +
Preference number: 2 (lower is better)
Translates to: TESQRPPVCISGSKSAAGSYCDP*GSCYPH
Trigger: ATGGGGATAACAGCTACCTCATGGATCACAATAAGA...GCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR TCA 90 bp ACCTGCCACCATGATAGTCCAGATCAGGCCACAGTAATGGTGGCTGGGCTGGGATCTTATTGTGATCCATaGGGTAGCTGTTATCCCCAT +
Preference number: 2 (lower is better)
Translates to: TCHHDSPDQATVMVAGLGSYCDP*GSCYPH
Trigger: ATGGGGATAACAGCTACCTCATGGATCACAATAAGA...TCCCAGCCCAGCCACCATTACTGTGGCCTGATCTGGACTATCATGGTGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR TCA 90 bp TTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTACCCCATCTTCCAGATaGAGTCACAGCAAATCTCAG +
Preference number: 2 (lower is better)
Translates to: FLAQSLQLALSMQLEFCSTPSSR*SHSKSQ
Trigger: CTGAGATTTGCTGTGACTTCATCTGGAAGATGGGGT...ACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR CCA 90 bp CAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGAGTTATAGGAGTATATaGAGCTCCCCACCGAAGGAA +
Preference number: 2 (lower is better)
Translates to: QQGGRTYFVKTDGVSSAMSYRSI*SSPPKE
Trigger: TTCCTTCGGTGGGGAGCTCCATATACTCCTATAACT...CATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR TCA 90 bp CAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGGTGATTGAAAGTAAATaGTCTCCTAACTTCCTACCT +
Preference number: 2 (lower is better)
Translates to: QQGGRTYFVKTDGVSSAMVIESK*SPNFLP
Trigger: AGGTAGGAAGTTAGGAGATCATTTACTTTCAATCAC...CATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR TCA 90 bp CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 2 (lower is better)
Translates to: QVTQPSPKEPDRIKPSAFMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...GAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR TCA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGAGTTCTCCTCCCTTGTaGTTGAAAGTAAATGATCTC +
Preference number: 2 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGSSPPL*LKVNDL
Trigger: GAGATCATTTACTTTCAATCACAAGGGAGGAGAACT...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR CCA 72 bp GGCCCAGGGGCTTCCTGGAGGCAGCAGAGCTGGAAGTaGGTTCGGCCCACTCAAAGGGTAGACTGTTGCCCC +
Preference number: 3 (lower is better)
Translates to: GPGASWRQQSWK*VRPTQRVDCCP
Trigger: GGGGCAACAGTCTACCCTTTGAGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR CCA 72 bp TCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTaGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: SSSLFLRSQHLR*AHRVHCGLLSP
Trigger: AGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483001.5
3UTR-3UTR CAA 90 bp AAGCCCAGTGTCCCTTCTCTAGGCCCAAGGCCACAGGGCCCAGGTAACCCAGCCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGG +
Preference number: 3 (lower is better)
Translates to: KPSVPSLGPRPQGPGNPAQFLPS*GLGTSW
Trigger: CCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTG...GGCTGGGTTACCTGGGCCCTGTGGCCTTGGGCCTAGAGAAGGGACACTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CCA 72 bp TTGGGGTTGGGGACCTCCTGGCTGAGAGCTGGAGGCTaGCCATACTCACGGCTCCATTCTGTATGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: LGLGTSWLRAGG*PYSRLHSVWPS
Trigger: GGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGCTCTCAGCCAGGAGGTCCCCAACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CAA 90 bp CTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCGCTGGGGCAGAAAGGTaGCTGAGGGTGAGCGTAGAG +
Preference number: 3 (lower is better)
Translates to: LSPRGLPFAFLAQSLQLAAGAER*LRVSVE
Trigger: CTCTACGCTCACCCTCAGCAACCTTTCTGCCCCAGC...GGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCCTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CAA 90 bp GCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTCTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: AGGWPYSRLHSVWPSTSSLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...AGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CCA 72 bp AAGGCCCACCTCTCACTTCCTTGCCATCCTGGGAGGTaGTGGGGAATGCAGAACCAGGTTCAGGGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: KAHLSLPCHPGR*WGMQNQVQGRE
Trigger: TTCCCTCCCCTGAACCTGGTTCTGCATTCCCCACCACCTCCCAGGATGGCAAGGAAGTGAGAGGTGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CAA 90 bp CTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCCTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LCQTPADHSAKKQAPHTLLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...GAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CAA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCGGTTGGTCCCTGCTGTaGTTGGGGATGTCCATGGGA +
Preference number: 3 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGGWSLL*LGMSMG
Trigger: TCCCATGGACATCCCCAACAACAGCAGGGACCAACC...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR TCA 72 bp TCGGTTCCACCCCTCATTCAGCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: SVPPLIQPKRSD*VPEASRLHFWL
Trigger: GAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGGCTGAATGAGGGGTGGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
3UTR TCA 72 bp GGATCAGGAAACAGTATGTTGGGGTGGGAGGAGCTCTaGGCTGGAAACTGGCAGCCTTGGGCCCCAGGAACA +
Preference number: 3 (lower is better)
Translates to: GSGNSMLGWEEL*AGNWQPWAPGT
Trigger: TGTTCCTGGGGCCCAAGGCTGCCAGTTTCCAGCTCAGAGCTCCTCCCACCCCAACATACTGTTTCCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CAA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTGCTGGGGCAGAAAGGTaGCTGAGGGTGAGCGTAGAG +
Preference number: 3 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSAGAER*LRVSVE
Trigger: CTCTACGCTCACCCTCAGCAACCTTTCTGCCCCAGC...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp TCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SAFYARPQQTIQPRSKLPQFLPS*GLGTSW
Trigger: CCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTG...GGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR GCA 72 bp GCAGGCAAGGCTAATAGACAGCTCATTTCCTGCATCTaGCACTCCGACGCACCTTCTTCCCTCGGTTCCACC +
Preference number: 3 (lower is better)
Translates to: AGKANRQLISCI*HSDAPSSLGST
Trigger: GGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
3UTR GCA 72 bp GAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTaGCATGTTCCTGCAGGCGTCAGGGGCTCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: EDVLCEDRRCLL*HVPAGVRGSLK
Trigger: CTTCAGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CAA 90 bp CTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: LTESQRPPVCISGSKSAAPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...AGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
3UTR GCA 72 bp CATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTCCATGGAACCTGCCAC +
Preference number: 3 (lower is better)
Translates to: HFWLKVCSWPFP*SWSSAVHGTCH
Trigger: GTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR GCA 72 bp TGGAAGTGGGTTCGGCCCACTCAAAGGGTAGACTGTTaGCCCTGGGTCTTACTCACTGAGCTTGTGATGCAG +
Preference number: 3 (lower is better)
Translates to: WKWVRPTQRVDC*PWVLLTELVMQ
Trigger: CTGCATCACAAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGAGTGGGCCGAACCCACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR GCA 72 bp GGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTaGCAGGCATCTACTGCTCTGTCCCTGGATAAGTCA +
Preference number: 3 (lower is better)
Translates to: GKHSLVSLGIEE*QASTALSLDKS
Trigger: TGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CCA 72 bp TGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGAACCTGCCACCATGAT +
Preference number: 3 (lower is better)
Translates to: WLKVCSWPFPCS*SSAVHGTCHHD
Trigger: ATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp GCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCAGGCCATCAAAGGGTAGACTGTaGCCCCTGGGTCTTACTCAC +
Preference number: 3 (lower is better)
Translates to: AGVLQSMEPATMIVQIRPSKGRL*PLGLTH
Trigger: GTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGA...TGGCCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
3UTR GCA 72 bp GACACAAAGCCGGCACTCATCATAACTGTCTCCAGCTaGCCCCGTCTGTATATCCTGTCCCTTCTTCACAGG +
Preference number: 3 (lower is better)
Translates to: DTKPALIITVSS*PRLYILSLLHR
Trigger: CCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGGCTTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CCA 72 bp TGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGAACTGAGCTTGTGATG +
Preference number: 3 (lower is better)
Translates to: WLKVCSWPFPCS*SSAVHGTELVM
Trigger: CATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR GCA 72 bp CATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTCCATGGAACTGAGCTT +
Preference number: 3 (lower is better)
Translates to: HFWLKVCSWPFP*SWSSAVHGTEL
Trigger: AAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR-3UTR CAA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGGCCTTCCACCTCCTCTaGTCTGTTTACCATAGATTT +
Preference number: 3 (lower is better)
Translates to: SARHLLLCPWISQAGGKRAFHLL*SVYHRF
Trigger: AAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGC...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR-3UTR CAA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGGCAGCTGAACAGCACTaGAAGGTTACAAAACTCTTT +
Preference number: 3 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQAAEQH*KVTKLF
Trigger: AAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGC...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp AAGCCGGCACTCATCATAACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCGCCTTCCACCTCCTCTaGTCTGTTTACCATAGATTT +
Preference number: 3 (lower is better)
Translates to: KPALIITVSSCPRLYILSAFHLL*SVYHRF
Trigger: AAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGC...GGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR GCA 72 bp TTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTaGCACCATGATAGTCCAGATCAGGCCACAGTAATG +
Preference number: 3 (lower is better)
Translates to: FPCSWSSAVHGT*HHDSPDQATVM
Trigger: CATTACTGTGGCCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGGGATCAGGTAAGCTGTaGGATCAGGAAACAGTATGT +
Preference number: 3 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMGSGKL*DQETVC
Trigger: ACATACTGTTTCCTGATCCAACAGCTTACCTGATCC...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR-3UTR CAA 90 bp TTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGGCAGCTGAACAGCACTaGAAGGTTACAAAACTCTTT +
Preference number: 3 (lower is better)
Translates to: FHAAGVLQSMEPATMIVQAAEQH*KVTKLF
Trigger: AAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGC...CTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp ACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCAATGAAAAGAAGCACCTaGTTAAATGAGGAAGCAGTT +
Preference number: 3 (lower is better)
Translates to: TVSSCPRLYILSLLHRASMKRST*LNEEAV
Trigger: AACTGCTTCCTCATTTAACAAGGTGCTTCTTTTCAT...TGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489170.5
ENST00000491434.5
3UTR TCA 72 bp GTGAGCGTAGAGTCTCCTGTGCTAAATCCCCGCAGCTaGACAGCACTTGAAGGTTACAAAACTCTTTCACTC +
Preference number: 3 (lower is better)
Translates to: VSVESPVLNPRS*TALEGYKTLSL
Trigger: GAGTGAAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGCGGGGATTTAGCACAGGAGACTCTACGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
3UTR-3UTR CAA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATATGAAAAGAAGCACCTaGTTAAATGAGGAAGCAGTT +
Preference number: 3 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHMKRST*LNEEAV
Trigger: AACTGCTTCCTCATTTAACAAGGTGCTTCTTTTCAT...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491434.5
3UTR TCA 72 bp AAAACTCTTTCACTCTTGTTCTCTTATTGTGATCCATaGGGTAGCTGTTATCCCCATAAGAGAGGAGGAAGC +
Preference number: 3 (lower is better)
Translates to: KTLSLLFSYCDP*GSCYPHKRGGS
Trigger: GCTTCCTCCTCTCTTATGGGGATAACAGCTACCTCATGGATCACAATAAGAGAACAAGAGTGAAAGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp AGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: STSAGLTGYTAASSALPVRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...AACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp AAGCCCAGTGTCCCTTCTCTAGGCCCAAGGCCACAGGGCCCAGGTAACCCAGCCCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: KPSVPSLGPRPQGPGNPARFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...GGCTGGGTTACCTGGGCCCTGTGGCCTTGGGCCTAGAGAAGGGACACTGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GASTSAGLTGYTAASSALTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...GAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GLAVRISAYLMGGAGKANAQVGS*TRCRPA
Trigger: CGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGC...ATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp GCAGCTCCAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: AAPEGNWGPLLWPPFVLSAQVGS*TRCRPA
Trigger: CGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGC...GCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp GGAGGGTCTGAGCTCAGCCATGCCAGTAGGAGCTGGTACAGGGCTGGAGGAAGGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: GGSELSHASRSWYRAGGRRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CCTTCCTCCAGCCCTGTACCAGCTCCTACTGGCATGGCTGAGCTCAGACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR TCA 90 bp TCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SQRPPVCISGSKSAAGPFAQVGS*TRCRPA
Trigger: CGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGC...GAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCATTCCGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PDPSRPFSQEASSPHSHSAQVGS*TRCRPA
Trigger: CGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGC...GGAATGAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHAQVGS*TRCRPA
Trigger: CGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGC...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCTCCTGGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: SAGLTGYTAASSALPVLLGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...CAGGAGAACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp AGAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RGAGSEDFCLPHGWGRQGPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...GCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp GAGAGGAGGAAGCTAAGGCCAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: ERRKLRPERGSARSIRSLRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTGGCCTTAGCTTCCTCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp GGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: GASTSAGLTGYTAASSALPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...GAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp GAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: EGLAVRISAYLMGGAGKAGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...AGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp AAGCCCAGTGTCCCTTCTCTAGGCCCAAGGCCACAGGGCCCAGGTAACCCAGCCGGAGGAGCTCTGAGCTaGAAACTGGCAGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KPSVPSLGPRPQGPGNPAGGALS*KLAALG
Trigger: GCCCAAGGCTGCCAGTTTCCAGCTCAGAGCTCCTCC...GGCTGGGTTACCTGGGCCCTGTGGCCTTGGGCCTAGAGAAGGGACACTGGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR TCA 90 bp GTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCTCCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VKTDGVSSAMFLQASGALPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...GAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCATCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DSSFPASATPTHLLPSVPSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAATCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EECQASTALSLDKSGWWESAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...TTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTGGTCCATCCGCTCACTaGCAGCACTTCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGLAVRISAYLMGGAGKAGPSAH*QHFMAQ
Trigger: CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACC...AGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp AGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: STSAGLTGYTAASSALPVFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...AACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SAAGPFHAAGVLQSMEPATRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...GGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR TCA 90 bp CTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LSPRGLPFAFLAQSLQLAPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...GGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR TCA 90 bp GCCTTCCCTTCCTCTGAGCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTTATGAGCCTTCCCTTCCTCTaGGCAGAGCAGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AFPSSEQSSPGCGGYFLMSLPFL*AEQPWL
Trigger: CAGCCAGGGCTGCTCTGCTCAGAGGAAGGGAAGGCT...CATAAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGCTCAGAGGAAGGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp CATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCCTCAACCAGAGCCAACACCTaGCCCAGAGACGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: HFLHLPLRRTFFPRFHPSTRANT*PRDAAM
Trigger: CATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGT...TGAGGGGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp GCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTTATGGGATTCTCTGGCCAGAGACCAGAGCCAACACCTaGCCCAGAGACGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: AEQPWLWGLFPYGILWPETRANT*PRDAAM
Trigger: CATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGT...CTCTGGCCAGAGAATCCCATAAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp GTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATAGACAGCTCCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: VRISAYLMGGAGKANRQLRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...GAGCTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp CTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: LKVCSWPFPCSWSSAVHGRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATGGCCCAGGGGCTTCCTGGTCCATCCGCTCACTaGCAGCACTTCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVLGPSAHCQHFMAQGLPGPSAH*QHFMAQ
Trigger: CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACC...AGGAAGCCCCTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCAGGCCCAGGGGCTTCCTaGAGGCAGCAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPGPGAS*RQQSWK
Trigger: CTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp TCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCTCCTGTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAGLTGYTAASSALPVLLSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...CAGGAGAACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp GCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTTATGGGATTCTCTGGCCAGAGGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: AEQPWLWGLFPYGILWPEGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...CTCTGGCCAGAGAATCCCATAAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp TCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQRPPVCISGSKSAAGPFTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...GAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCATTCCACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PDPSRPFSQEASSPHSHSTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...GGAATGAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGHLLSLASSSLFLRSQHTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...GTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SARHLLLCPWISQAGGKRTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCGGGGCTATTTCCTTATaGGATTCTCTGGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GASTSAGLTGYTAASSALGAISL*DSLARE
Trigger: TTCTCTGGCCAGAGAATCCCATAAGGAAATAGCCCC...GAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp GCCTTCCCTTCCTCTGAGCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTTATGAGCCAGCACCTCCGCTaGGCTCACAGGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: AFPSSEQSSPGCGGYFLMSQHLR*AHRVHC
Trigger: GCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCT...CATAAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGCTCAGAGGAAGGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAACCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: EECQASTALSLDKSGWWEPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...TTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR TCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGGGTGGGAGGAGCTCTaGGCTGGAAACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EECQASTALSLDKSGWWEGWEEL*AGNWQP
Trigger: AGGCTGCCAGTTTCCAGCTCAGAGCTCCTCCCACCC...TTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp AGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RLIDSSFPASATPTHLLPSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...GGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp CAGGCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QARLIDSSFPASATPTHLSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...AAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp AAGAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KRQQGGRTYFVKTDGVSSSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...AGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp ATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: ICFLCQTPADHSAKKQAPRFSSG*VPPHRA
Trigger: CGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...GGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCCTACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LISCICHSDAPSSLGSTPTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...AGGGGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp GAGAGCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCCTCTGCCATGTTCCTaGAGGCGTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ESWRLAILTAPFCMAFHLPLPCS*RRQGLS
Trigger: AGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGG...GAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCTGGAGGCAGCAGAGCTaGAAGTGGGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SAAGPFHAAGVLQSMEPAWRQQS*KWVRPT
Trigger: AGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCA...GGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp GAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATGGCCCAGGGGCTTCCTCATGCCAGTAGGAGCTaGTACAGGGCTGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EVLGPSAHCQHFMAQGLPHASRS*YRAGGR
Trigger: CCTTCCTCCAGCCCTGTACCAGCTCCTACTGGCATG...AGGAAGCCCCTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp GTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCTCGGTCCCTGCTGTTGTTaGGGATGTCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKTDGVSSAMFLQASGALGPCCC*GCPWEQ
Trigger: CTGCTCCCATGGACATCCCCAACAACAGCAGGGACC...GAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CAA 72 bp TACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTaGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YSGHLLSLASSS*FLRSQHLRWAH
Trigger: GTGAGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp GCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCAGGGCAGGAATGCTaGGGGCTCTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AICFLCQTPADHSAKKQAPGQEC*GLFSLG
Trigger: GCCCAGGCTGAAGAGCCCTCAGCATTCCTGCCCTGG...AGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp TGGGGCTCACAGCTCTCTACCTGTTTAAGAGGGGCTGGCAGTGAGGATTTCTGCACCAGAGCCAACACCTaGCCCAGAGACGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: WGSQLSTCLRGAGSEDFCTRANT*PRDAAM
Trigger: CATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGT...GCAGAAATCCTCACTGCCAGCCCCTCTTAAACAGGTAGAGAGCTGTGAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATACCAGAGCCAACACCTaGCCCAGAGACGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHTRANT*PRDAAM
Trigger: CATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGT...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR GCA 90 bp AGAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: RGAGSEDFCLPHGWGRQGFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...GCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp ACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TESQRPPVCISGSKSAAGTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...GCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EECQASTALSLDKSGWWETTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...TTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAGAGCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCAGACGGTGTCTCCTCTaGCATGTTCCTGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: ESWRLAILTAPFCMAFHLRRCLL*HVPAGV
Trigger: GACGCCTGCAGGAACATGGCAGAGGAGACACCGTCT...GAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGCTCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp ACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TAHFLHLPLRRTFFPRFHPETPP*QRRCLL
Trigger: TAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGG...GTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp CATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCCTCACAGCAGAGCTGGAAGTaGGTTCGGCCCACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: HFLHLPLRRTFFPRFHPSQQSWK*VRPTQR
Trigger: CCTTTGAGTGGGCCGAACCCACTTCCAGCTCTGCTG...TGAGGGGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp ACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACTGGAGGCAGCAGAGCTaGAAGTGGGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: TAHFLHLPLRRTFFPRFHWRQQS*KWVRPT
Trigger: AGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCA...GTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp CTAAGGCCAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATTGGAGGCAGCAGAGCTaGAAGTGGGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LRPERGSARSIRSLPALHWRQQS*KWVRPT
Trigger: AGTGGGCCGAACCCACTTCCAGCTCTGCTGCCTCCA...ATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp AGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: RLAILTAPFCMAFHLLLSGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...AGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: GRTYFVKTDGVSSAMFLQGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...CTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp ACAAAGCCGGCACTCATCATAACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKPALIITVSSCPRLYILTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...CAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CTAAGGCCAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATGAGCTGGTACAGGGCTaGAGGAAGGGCTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LRPERGSARSIRSLPALHELVQG*RKGSDG
Trigger: CCCATCTGAGCCCTTCCTCCAGCCCTGTACCAGCTC...ATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp GTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCTCACAGTCTGGTTTCACTaGGCATCGAGGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKTDGVSSAMFLQASGALTVWFH*ASRSAR
Trigger: CCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGT...GAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGGAGCAGCCCTGGCTGTaGGGGCTATTTCCTTATGGG +
Preference number: 4 (lower is better)
Translates to: PEGNWGPLLWPPFVLSLQEQPWL*GLFPYG
Trigger: CCCATAAGGAAATAGCCCCCACAGCCAGGGCTGCTC...CTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp CTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCCTGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LISCICHSDAPSSLGSTPGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...AGGGGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp GTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCTCGGAGGACGTACTTTGTaGAGACAGACGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKTDGVSSAMFLQASGALGGRTL*RQTVSP
Trigger: AGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCC...GAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GAGAGCTGGAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCAAGAAATGAGCCAGTaGGCATGGGGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESWRLAILTAPFCMAFHLQEMSQ*AWGMVV
Trigger: CACCACCATGCCCCATGCTCACTGGCTCATTTCTTG...GAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GCAGCTCCAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AAPEGNWGPLLWPPFVLSSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...GCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp GCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCAGGACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAGVLQSMEPATMIVQIRTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...CCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCTGGGCATCACCCAGTaGTGCCTCCCCTCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: EAARREDVLCEDRRCLLCLGITQ*CLPSLG
Trigger: TCCTAAAGAGGGGAGGCAGCACTGGGTGATGCCCAG...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp CCGGCACTCATCATAACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCCTCTGCCATGTTCCTaGAGGCGTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PALIITVSSCPRLYILSLPLPCS*RRQGLS
Trigger: AGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGG...AAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCAGACGGTGTCTCCTCTaGCATGTTCCTGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: EAGHTHGSILYGLPPPLVRRCLL*HVPAGV
Trigger: GACGCCTGCAGGAACATGGCAGAGGAGACACCGTCT...GACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACAGCAGAGCTGGAAGTaGGTTCGGCCCACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DSSFPASATPTHLLPSVPQQSWK*VRPTQR
Trigger: CCTTTGAGTGGGCCGAACCCACTTCCAGCTCTGCTG...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCAGCAGAGCTGGAAGTaGGTTCGGCCCACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQQQSWK*VRPTQR
Trigger: CCTTTGAGTGGGCCGAACCCACTTCCAGCTCTGCTG...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp GCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTGGCCCAGGGGCTTCCTaGAGGCAGCAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARLIDSSFPASATPTHLLGPGAS*RQQSWK
Trigger: CTTCCAGCTCTGCTGCCTCCAGGAAGCCCCTGGGCC...AAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp TTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: FLAQSLQLALSMQLEFCSGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...ACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTACTCGCCAGGTGTGCTaGAGTCAGGTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARLIDSSFPASATPTHLLTRQVC*SQVGLG
Trigger: CCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGT...AAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp CTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCCTACTGCTCTGTCCCTaGATAAGTCAGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGIEECQASTALSLDKSGLLLCP*ISQAGG
Trigger: CCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAG...GCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTACAGTCTGGTTTCACTaGGCATCGAGGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ESQRPPVCISGSKSAAGPTVWFH*ASRSAR
Trigger: CCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGT...AGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTGGGGAAGCACAGTCTaGTTTCACTGGGCATCGAGG +
Preference number: 4 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGWGSTV*FHWASR
Trigger: CCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCCA...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GCCCTGGCTGTGGGGGCTATTTCCTTATGGGATTCTCTGGCCAGAGAAAGGAGTGCTCCAGAGGGCAACTaGGGACCACTACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALAVGAISLWDSLARERSAPEGN*GPLLWP
Trigger: TGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTGGAGC...ACTCCTTTCTCTGGCCAGAGAATCCCATAAGGAAATAGCCCCCACAGCCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp TCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGACAAGAAATGAGCCAGTaGGCATGGGGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGFTGHRGVPGIYCSVPGQEMSQ*AWGMVV
Trigger: CACCACCATGCCCCATGCTCACTGGCTCATTTCTTG...TCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGAGAAAGGAGTAGCTaGCTAAGCCTGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QRATGDHYSGHLLSLASSRERSS*LSLGEG
Trigger: ACCCTCTCCCAGGCTTAGTCAGCTACTCCTTTCTCT...GCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp CAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: QQLVPQEPAPPLGSQGTLGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...CAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR GCA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR GCA 90 bp GGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GSKSAAGPFHAAGVLQSMSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR GCA 90 bp TTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCTGGGCATCGAGGAGTaGCAGGCATCTACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FWLKVCSWPFPCSWSSAVLGIEE*QASTAL
Trigger: CAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG...GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp AAGAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTCCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KRQQGGRTYFVKTDGVSSPETPP*QRRCLL
Trigger: TAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGG...AGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461402.5
ENST00000489170.5
CDS-3UTR CCA 90 bp CCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PCSWSSAVHGTCHHDSPDPETPP*QRRCLL
Trigger: TAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGG...ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp CAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATGGCCCAGTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRGEVLGPSAHCQHFMAQSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp GTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCTCTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VKTDGVSSAMFLQASGALSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...GAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp ACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACTTTCTGCCTACCTCATaGGTGGGGCAGGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TAHFLHLPLRRTFFPRFHFLPTS*VGQARL
Trigger: TAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAA...GTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCAGAGGAAGGGCTCAGATaGGGTCTGGTCTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: DSSFPASATPTHLLPSVPEEGLR*GLVFNP
Trigger: GGGATTGAAGACCAGACCCCATCTGAGCCCTTCCTC...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp CTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCGACAGTGACATAGGTTaGTCCCTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGIEECQASTALSLDKSGDSDIG*SLLLLG
Trigger: CCCCAACAACAGCAGGGACCAACCTATGTCACTGTC...GCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGGATAAGTCAGGCTGGTaGGAAGAGGCAGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SARHLLLCPWISQAGGKRDKSGW*EEAARR
Trigger: CCTCCTTGCTGCCTCTTCCCACCAGCCTGACTTATC...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCGATAAGTCAGGCTGGTaGGAAGAGGCAGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RQQGGRTYFVKTDGVSSADKSGW*EEAARR
Trigger: CCTCCTTGCTGCCTCTTCCCACCAGCCTGACTTATC...GGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCTGGGGAAGCACAGTCTaGTTTCACTGGGCATCGAGG +
Preference number: 4 (lower is better)
Translates to: EAARREDVLCEDRRCLLCWGSTV*FHWASR
Trigger: CCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCCA...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCTGGGGACCACTACTCTaGCCACCTTTTGTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QRATGDHYSGHLLSLASSWGPLL*PPFVLS
Trigger: GCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCA...GCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp GCTCTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCACTGAACTCTGAGGTCTaGGACCAGCCTGTCGATGCC +
Preference number: 4 (lower is better)
Translates to: ALTESQRPPVCISGSKSALNSEV*DQPVDA
Trigger: GGCATCGACAGGCTGGTCCCAGACCTCAGAGTTCAG...TGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR TCA 90 bp TGGGGCTCACAGCTCTCTACCTGTTTAAGAGGGGCTGGCAGTGAGGATTTCTGCGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: WGSQLSTCLRGAGSEDFCGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...GCAGAAATCCTCACTGCCAGCCCCTCTTAAACAGGTAGAGAGCTGTGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp CCGGCACTCATCATAACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PALIITVSSCPRLYILSLGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...AAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: QRATGDHYSGHLLSLASSKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp CAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTCATGGCCCAGGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: QRGEVLGPSAHCQHFMAQACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp CAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGCAGCAGGAGGACGTACTTTGTaGAGACAGACGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QASTALSLDKSGWWEEAAGGRTL*RQTVSP
Trigger: AGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCC...TGCTGCCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGCAAGAAATGAGCCAGTaGGCATGGGGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QQGGRTYFVKTDGVSSAMQEMSQ*AWGMVV
Trigger: CACCACCATGCCCCATGCTCACTGGCTCATTTCTTG...CATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp AGACACTCAGACAGAGGAGCCCTTGGATCAGGTAAGCTGTTGGATCAGGAAACAACCAGAGCCAACACCTaGCCCAGAGACGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: RHSDRGALGSGKLLDQETTRANT*PRDAAM
Trigger: CATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGT...TGTTTCCTGATCCAACAGCTTACCTGATCCAAGGGCTCCTCTGTCTGAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR GCA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCATTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: DSSFPASATPTHLLPSVPFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp TCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SGFTGHRGVPGIYCSVPGFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...TCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGCAGCATTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: QASTALSLDKSGWWEEAAFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...TGCTGCCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: EAGHTHGSILYGLPPPLVFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...GACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp ACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCTCATTTCCTGCATCTaGCACTCCGACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TAHFLHLPLRRTFFPRFHLISCI*HSDAPS
Trigger: AGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAG...GTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp AAGCTAAGGCCAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTAGACAGCTCATTTCCTaGATCTGCCACTCCGACGCA +
Preference number: 4 (lower is better)
Translates to: KLRPERGSARSIRSLPALRQLIS*ICHSDA
Trigger: TGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCT...AAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTGGCCTTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp AGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCGGCAGTGAGGATTTCTaGCTACCTCATGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLIDSSFPASATPTHLLPGSEDF*LPHGWG
Trigger: GCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCC...GGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp AATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTGGCAGTGAGGATTTCTaGCTACCTCATGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NRQLISCICHSDAPSSLGGSEDF*LPHGWG
Trigger: GCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCC...ACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp CAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCGGAGGTGGTGGGGAATaGAGAACCAGGTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QGGRTYFVKTDGVSSAMFGGGGE*RTRFRG
Trigger: TCCCCTGAACCTGGTTCTGCATTCCCCACCACCTCC...GAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp ATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGTCCATGGGAGCAGAATaGTCAGACACAAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: IEECQASTALSLDKSGWWSMGAE*SDTKPA
Trigger: TGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGA...CCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCAGGACCAGCCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPGPACR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGGCTGGTCC...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp CTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: LSPRGLPFAFLAQSLQLARRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...GGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTTATGGGATTCTCTGGCCAGAGAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: AEQPWLWGLFPYGILWPERRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...CTCTGGCCAGAGAATCCCATAAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCGTAGACTGTTGCCCCTaGGTCTTACTCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SAAGPFHAAGVLQSMEPAVDCCP*VLLTEL
Trigger: AAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTAC...GGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp CATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCCCTCAGTAGACTGTTGCCCCTaGGTCTTACTCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HFLHLPLRRTFFPRFHPSVDCCP*VLLTEL
Trigger: AAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTAC...TGAGGGGTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp GCTCTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCACACAGTAATGGTGGCTaGGCTGGGAGCCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: ALTESQRPPVCISGSKSAHSNGG*AGSLRC
Trigger: ACATCTCAGGCTCCCAGCCCAGCCACCATTACTGTG...TGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp TCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGACCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SGFTGHRGVPGIYCSVPGPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...TCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ESQRPPVCISGSKSAAGPSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...AGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR CCA 90 bp CTCACTGAGCTTGTGATGCAGAGTGAAATTCCTATCACGGTGAGCACCATGCCAGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: LTELVMQSEIPITVSTMPGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...TGGCATGGTGCTCACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGGGTCCCTGCTGTTGTTaGGGATGTCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMGPCCC*GCPWEQ
Trigger: CTGCTCCCATGGACATCCCCAACAACAGCAGGGACC...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCATTCCGACAGTGACATAGGTTaGTCCCTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PDPSRPFSQEASSPHSHSDSDIG*SLLLLG
Trigger: CCCCAACAACAGCAGGGACCAACCTATGTCACTGTC...GGAATGAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCCTGGATAAGTCAGGCTaGTGGGAAGAGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SAFYARPQQTIQPRSKLPLDKSG*WEEAAR
Trigger: CCTTGCTGCCTCTTCCCACCAGCCTGACTTATCCAG...GGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATCTGGATAAGTCAGGCTaGTGGGAAGAGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHLDKSG*WEEAAR
Trigger: CCTTGCTGCCTCTTCCCACCAGCCTGACTTATCCAG...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp CCGGCACTCATCATAACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTACAGTCTGGTTTCACTaGGCATCGAGGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PALIITVSSCPRLYILSLTVWFH*ASRSAR
Trigger: CCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGT...AAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGTTATGATGAGTGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CAA 72 bp GAGGAAGCAGTTCCTAATTTCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGGCTGAGAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EEAVPNFQFLPS*GLGTSWLRAGG
Trigger: GCCTCCAGCTCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTGGAAATTAGGAACTGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp ATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: IDSSFPASATPTHLLPSVGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...AACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp CTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGTTGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LAILTAPFCMAFHLLLSVGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...AACAGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp ACCTGCCACCATGATAGTCCAGATCAGGCCACAGTAATGGTGGCTGGGCTGGGACTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: TCHHDSPDQATVMVAGLGLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...TCCCAGCCCAGCCACCATTACTGTGGCCTGATCTGGACTATCATGGTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR TCA 90 bp ACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCACTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: TVSSCPRLYILSLLHRASLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...TGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: EAGHTHGSILYGLPPPLVKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: QRATGDHYSGHLLSLASSACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...GCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp GCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGTTTACGGAAAGGGGCTAGCATaGAGGTCCAGGGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: AILTAPFCMAFHLLLSVYGKGLA*RSRAGM
Trigger: CATTCCTGCCCTGGACCTTCATGCTAGCCCCTTTCC...GTAAACAGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp CCTTCCACCTCCTCTTGTCTGTTTACCATAGATTTATTGACAGCTACTACTCGCTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSTSSCLFTIDLLTATTRSAAAA*HPTERP
Trigger: TGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGA...GCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGACAAGAGGAGGTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCAAAGGGTAGACTGTTaGCCCTGGGTCTTACTCACT +
Preference number: 4 (lower is better)
Translates to: VPEASRLHFWLKVCSWPFQRVDC*PWVLLT
Trigger: AGTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTG...AAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCAGCAGTCCATGGAACCTaGCACCATGATAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPAVHGT*HHDSPD
Trigger: ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGC...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp GCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATAGACAGCACCATGCCAGCAACTaGTCCTGGGATAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: AVRISAYLMGGAGKANRQHHASN*SWDNRQ
Trigger: CTGCCTATTATCCCAGGAGCAGTTGCTGGCATGGTG...CTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR GCA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGATAACTGTCTCCAGCTaGCCCCGTCTGTATATCCTG +
Preference number: 4 (lower is better)
Translates to: SARHLLLCPWISQAGGKRITVSS*PRLYIL
Trigger: CAGGATATACAGACGGGGGCAGCTGGAGACAGTTAT...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGCCATCTGCTTTCTATaGCAGACCCCAGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: AARREDVLCEDRRCLLCHAICFL*QTPADH
Trigger: ATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGC...ATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp AGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGCCATCTGCTTTCTATaGCAGACCCCAGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: RLAILTAPFCMAFHLLLSAICFL*QTPADH
Trigger: ATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGC...AGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGCCATCTGCTTTCTATaGCAGACCCCAGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: LTESQRPPVCISGSKSAAAICFL*QTPADH
Trigger: ATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGC...AGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp CGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGACCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RIKPSAFYARPQQTIQPRPETPP*QRRCLL
Trigger: TAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGG...TCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461402.5
ENST00000489170.5
CDS-3UTR CCA 90 bp ACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: TAHFLHLPLRRTFFPRFHRRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...GTGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp ACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCAAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: TVSSCPRLYILSLLHRASRRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...TGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp GAGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: EAGHTHGSILYGLPPPLVRRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...GACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCAGTAGACTGTTGCCCCTaGGTCTTACTCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPVDCCP*VLLTEL
Trigger: AAGCTCAGTGAGTAAGACCCAGGGGCAACAGTCTAC...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CCA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGACTGCCAGCACTTCATaGCCCAGGGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGTASTS*PRGFLE
Trigger: CTCCAGGAAGCCCCTGGGCCATGAAGTGCTGGCAGT...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp CAGGCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCACAGTAATGGTGGCTaGGCTGGGAGCCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: QARLIDSSFPASATPTHLHSNGG*AGSLRC
Trigger: ACATCTCAGGCTCCCAGCCCAGCCACCATTACTGTG...AAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp TCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SAFYARPQQTIQPRSKLPPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...GGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGTTTCTGCCTACCTCATaGGTGGGGCAGGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LIDSSFPASATPTHLLPSFLPTS*VGQARL
Trigger: TAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAA...CGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp ATTCCTATCACGGTGAGCACCATGCCAGCAACTGCTCGTTTTCCACCAATATCTGGAGTCAGGTGGGGCTaGGGCTCACAGCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: IPITVSTMPATARFPPISGVRWG*GSQLST
Trigger: GGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCC...AGATATTGGTGGAAAACGAGCAGTTGCTGGCATGGTGCTCACCGTGATAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CCA 90 bp ATAGGCAGAAATCAGGAGGGTCTGAGCTCAGCCATGCCAGTAGGAGCTGGTACAGAGGAAAGGGCAGGATaGGAAAAGGCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: IGRNQEGLSSAMPVGAGTEERAG*EKAVSS
Trigger: TGAGGACACGGCCTTTTCCCATCCTGCCCTTTCCTC...TGTACCAGCTCCTACTGGCATGGCTGAGCTCAGACCCTCCTGATTTCTGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp TGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGGGCTCAGATGGGGTCTaGTCTTCAATCCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: CISGSKSAAGPFHAAGVLGSDGV*SSIPNP
Trigger: GGGGTTTGGGATTGAAGACCAGACCCCATCTGAGCC...CAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp ATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGTGTTGGGGATGTCCATaGGAGCAGAATGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: IEECQASTALSLDKSGWWCWGCP*EQNAQT
Trigger: TGTCTGAGCATTCTGCTCCCATGGACATCCCCAACA...CCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCGGTCCCTGCTGTTGTTaGGGATGTCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QVTQPSPKEPDRIKPSAFGPCCC*GCPWEQ
Trigger: CTGCTCCCATGGACATCCCCAACAACAGCAGGGACC...GAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTACTGCTCTGTCCCTaGATAAGTCAGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGGRTYFVKTDGVSSAMFLLLCP*ISQAGG
Trigger: CCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAG...GAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
3UTR CAA 72 bp CACTCAGACAGAGGAGCCCTTGGATCAGGTAAGCTGTaGGATCAGGAAACAGTATGTTGGGGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HSDRGALGSGKL*DQETVCWGGRS
Trigger: GCTCCTCCCACCCCAACATACTGTTTCCTGATCCAACAGCTTACCTGATCCAAGGGCTCCTCTGTCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR TCA 90 bp TTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCGGGATCCACACTGGTTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: FAFLAQSLQLALSMQLEFGIHTG*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCC...GAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGCTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: QQGGRTYFVKTDGVSSAMLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...CATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: SAFYARPQQTIQPRSKLPKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: EAARREDVLCEDRRCLLCACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp ATAGGCAGAAATCAGGAGGGTCTGAGCTCAGCCATGCCAGTAGGAGCTGGTACAAGGGGAAGGGAACTCTaGTGGCCACAAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: IGRNQEGLSSAMPVGAGTRGREL*WPQGSK
Trigger: TTTGCTTCCTTGTGGCCATCAGAGTTCCCTTCCCCT...TGTACCAGCTCCTACTGGCATGGCTGAGCTCAGACCCTCCTGATTTCTGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR GCA 90 bp AAGCTAAGGCCAGAGAGGGGAAGTGCTAGGTCCATCCGCTCACTGCCAGCACTTGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: KLRPERGSARSIRSLPALGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...AAGTGCTGGCAGTGAGCGGATGGACCTAGCACTTCCCCTCTCTGGCCTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp GCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATAGACAGCAAAGGGTAGACTGTTaGCCCTGGGTCTTACTCACT +
Preference number: 4 (lower is better)
Translates to: AVRISAYLMGGAGKANRQQRVDC*PWVLLT
Trigger: AGTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTG...CTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp GCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCAGGCCACAAAGGGTAGACTGTTaGCCCTGGGTCTTACTCACT +
Preference number: 4 (lower is better)
Translates to: AGVLQSMEPATMIVQIRPQRVDC*PWVLLT
Trigger: AGTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTG...TGGCCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTTTCTGGCTCAAAGTCTaGAGCTGGCCCTTTCCATGC +
Preference number: 4 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSFWLKV*SWPFPC
Trigger: GCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAA...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp GCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCAGGCCACAGTAATGGTGAGACAGCTCATTTCCTaGATCTGCCACTCCGACGCA +
Preference number: 4 (lower is better)
Translates to: AVHGTCHHDSPDQATVMVRQLIS*ICHSDA
Trigger: TGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCT...CACCATTACTGTGGCCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp CTCACTGAGCTTGTGATGCAGAGTGAAATTCCTATCACGGTGAGCACCATGCCAGGCAGTGAGGATTTCTaGCTACCTCATGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTELVMQSEIPITVSTMPGSEDF*LPHGWG
Trigger: GCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCC...TGGCATGGTGCTCACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR GCA 90 bp AGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCATGGGAGCAGAATaGTCAGACACAAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SHLLSMPDPSRPFSQEASSMGAE*SDTKPA
Trigger: TGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGA...GCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp TCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCTGGGCATCGAGGAGTaGCAGGCATCTACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPKEPDRIKPSAFYARPQLGIEE*QASTAL
Trigger: CAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG...CTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp GAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCTGGGCATCGAGGAGTaGCAGGCATCTACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: EPDRIKPSAFYARPQQTILGIEE*QASTAL
Trigger: CAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG...AATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: RLIDSSFPASATPTHLLPPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...GGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp ATGCAGAGTGAAATTCCTATCACGGTGAGCACCATGCCAGCAACTGCTCCTGGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: MQSEIPITVSTMPATAPGPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...CCCAGGAGCAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTTCACTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp ATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: ISGSKSAAGPFHAAGVLQPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...CTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR CCA 90 bp TTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTTTCTGCCTACCTCATaGGTGGGGCAGGCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: FAFLAQSLQLALSMQLEFFLPTS*VGQARL
Trigger: TAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAA...GAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCAGTTTCTTCCTTCCTTaGGGTTGGGGACCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QVTQPSPKEPDRIKPSAFSFFLP*GWGPPG
Trigger: GCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACT...GAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp ATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGAAGCACCTGGAAAGAGGGCTCTTCAGCCTaGGCATCACCCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISCPFFTGPHHMKRSTWKEGSSA*ASPSAA
Trigger: GGCAGCACTGGGTGATGCCCAGGCTGAAGAGCCCTC...TTTCCAGGTGCTTCTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR CCA 90 bp CAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTGTTGGGGATGTCCATaGGAGCAGAATGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QQGGRTYFVKTDGVSSAMCWGCP*EQNAQT
Trigger: TGTCTGAGCATTCTGCTCCCATGGACATCCCCAACA...CATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAGACAGTGACATAGGTTaGTCCCTGCTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SCPRLYILSLLHRASSHEDSDIG*SLLLLG
Trigger: CCCCAACAACAGCAGGGACCAACCTATGTCACTGTC...TTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCTGGGGAAGCACAGTCTaGTTTCACTGGGCATCGAGG +
Preference number: 4 (lower is better)
Translates to: PLQRNQTELSHLLSMPDPWGSTV*FHWASR
Trigger: CCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCCA...GGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGGCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: QARLIDSSFPASATPTHLLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...AAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp TGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: CISGSKSAAGPFHAAGVLKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...CAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR TCA 90 bp ATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: ISGSKSAAGPFHAAGVLQKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...CTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR TCA 90 bp CTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: LKVCSWPFPCSWSSAVHGACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR TCA 90 bp GGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRTYFVKTDGVSSAMFLQACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...CTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACTGAGCTTGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSWPFPCSWSSAVHGTELACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...AAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR TCA 90 bp GGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATTCTTATTGTGATCCATaGGGTAGCTGTTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLAVRISAYLMGGAGKANSYCDP*GSCYPH
Trigger: ATGGGGATAACAGCTACCTCATGGATCACAATAAGA...ATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR TCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCACCAAAGCGCTCTGACTaGGTCCCAGAGGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESPKRSD*VPEASR
Trigger: ACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGG...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GCAGCTCCAGAGGGCAACTGGGGACCACTACTCTGGCCACCTTTTGTCCTTAGCATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: AAPEGNWGPLLWPPFVLSMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...GCTAAGGACAAAAGGTGGCCAGAGTAGTGGTCCCCAGTTGCCCTCTGGAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR TCA 90 bp TGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGGGAGGACGTACTTTGTaGAGACAGACGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPRLYILSLLHRASSHEKGGRTL*RQTVSP
Trigger: AGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCC...CTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGCAAACCCACATCTCCTaGCTCCACGTTCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGQTHIS*LHVQCF
Trigger: GAAGCACTGAACGTGGAGTCAGGAGATGTGGGTTTG...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR GCA 90 bp TTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGGCAGTCCATGGAACCTaGCACCATGATAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FHAAGVLQSMEPATMIVQAVHGT*HHDSPD
Trigger: ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGC...CTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp ATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGAAGCACCTGGAAAACTACTCGCCAGGTGTaGTGGAGTCAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISCPFFTGPHHMKRSTWKTTRQV*WSQVGL
Trigger: CAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGT...TTTCCAGGTGCTTCTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGATAACTGTCTCCAGCTaGCCCCGTCTGTATATCCTG +
Preference number: 4 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMITVSS*PRLYIL
Trigger: CAGGATATACAGACGGGGGCAGCTGGAGACAGTTAT...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMRRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGACTGCCAGCACTTCATaGCCCAGGGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTIDLLTATTRQVCWSQVTASTS*PRGFLE
Trigger: CTCCAGGAAGCCCCTGGGCCATGAAGTGCTGGCAGT...CACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CCA 90 bp AAGAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRQQGGRTYFVKTDGVSSSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...AGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATTGGGGAGATGGGTTCTaGGAAGGAACTAACACAGGT +
Preference number: 4 (lower is better)
Translates to: PCSWSSAVHGTCHHDSPDWGDGF*EGTNTG
Trigger: ACCTGTGTTAGTTCCTTCCCAGAACCCATCTCCCCA...ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp TGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGCAGGAAACAGTATGTTaGGGTGGGAGGAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: CPRLYILSLLHRASSHEKQETVC*GGRSSE
Trigger: CTCAGAGCTCCTCCCACCCCAACATACTGTTTCCTG...CTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR CCA 90 bp AGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTGTTGGGGATGTCCATaGGAGCAGAATGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: SHLLSMPDPSRPFSQEASCWGCP*EQNAQT
Trigger: TGTCTGAGCATTCTGCTCCCATGGACATCCCCAACA...GCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AGACACTCAGACAGAGGAGCCCTTGGATCAGGTAAGCTGTTGGATCAGGAAACAGATAAGTCAGGCTGGTaGGAAGAGGCAGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHSDRGALGSGKLLDQETDKSGW*EEAARR
Trigger: CCTCCTTGCTGCCTCTTCCCACCAGCCTGACTTATC...TGTTTCCTGATCCAACAGCTTACCTGATCCAAGGGCTCCTCTGTCTGAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR CCA 90 bp GAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCTGGATAAGTCAGGCTaGTGGGAAGAGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EPDRIKPSAFYARPQQTILDKSG*WEEAAR
Trigger: CCTTGCTGCCTCTTCCCACCAGCCTGACTTATCCAG...AATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCCTACTGCTCTGTCCCTaGATAAGTCAGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NQTELSHLLSMPDPSRPFLLLCP*ISQAGG
Trigger: CCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAG...GAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGCTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: CPRLYILSLLHRASSHEKLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...CTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: QVTQPSPKEPDRIKPSAFKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...GAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp AATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: NRQLISCICHSDAPSSLGACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...ACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR TCA 90 bp CCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTGCTTGTGATGCAGAGTaGAATTCCTATCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: PFPCSWSSAVHGTCHHDSACDAE*NSYHGE
Trigger: CTCACCGTGATAGGAATTTCACTCTGCATCACAAGC...ACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp GTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTTACTCACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: VPEASRLHFWLKVCSWPFYSLSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTA...AAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCAATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: DSSFPASATPTHLLPSVPMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344461.7
CDS-3UTR TCA 90 bp AGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCTGGTGGGAAGAGGATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: SARHLLLCPWISQAGGKRMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...CCTCTTCCCACCAGCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: EAARREDVLCEDRRCLLCMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGAATGGAACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: SGFTGHRGVPGIYCSVPGMELSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTTCCAT...TCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp ATGCAGAGTGAAATTCCTATCACGGTGAGCACCATGCCAGCAACTGCTCCTGGGGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: MQSEIPITVSTMPATAPGGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...CCCAGGAGCAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTTCACTCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR GCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTCCATCCGCTCACTaGCAGCACTTCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESGPSAH*QHFMAQ
Trigger: CTGGGCCATGAAGTGCTGGCAGTGAGCGGATGGACC...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGCTCATTTCCTGCATCTaGCACTCCGACGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGLISCI*HSDAPS
Trigger: AGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAG...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR GCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCACCTCAGCCCCAGCTCTaGCATCTTGAGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESPQPQL*HLESQQ
Trigger: CTGCTGGCTCTCAAGATGGCAGAGCTGGGGCTGAGG...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CCA 90 bp TGTCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: CLFTIDLLTATTRQVCWSPETPP*QRRCLL
Trigger: TAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGG...ACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373593.5
ENST00000461402.5
ENST00000489170.5
CDS-3UTR CCA 90 bp AATTCCTATCACGGTGAGCACCATGCCAGCAACTGCTCCTGGGATAATAGGCAGAGAAGGGATCCACACTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: NSYHGEHHASNCSWDNRQRRDPH*LRRKGI
Trigger: GATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCT...CTGCCTATTATCCCAGGAGCAGTTGCTGGCATGGTGCTCACCGTGATAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CCA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGCCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGTCCCGTTTGCATTTCTaGCTCAAAGTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGSRLHF*LKVCSW
Trigger: CCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGA...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp CCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATGCCAGCAACTGCTCCTaGGATAATAGGCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: PCSWSSAVHGTCHHDSPDASNCS*DNRQKS
Trigger: TGATTTCTGCCTATTATCCCAGGAGCAGTTGCTGGC...ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR TCA 90 bp GCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGATCAGGTACTCACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: AAGVLQSMEPATMIVQIRYSLSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTA...CCTGATCTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp CTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTTACTCACTGAGCTTGTaGTGCAGAGTGAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: LTESQRPPVCISGSKSAAYSLSL*CRVKFL
Trigger: TAGGAATTTCACTCTGCATCACAAGCTCAGTGAGTA...AGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp CAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATTCTTATTGTGATCCATaGGGTAGCTGTTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: QRPPVCISGSKSAAGPFHSYCDP*GSCYPH
Trigger: ATGGGGATAACAGCTACCTCATGGATCACAATAAGA...ATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR TCA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCGTGATTGAAAGTAAATaGTCTCCTAACTTCCTACCT +
Preference number: 4 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCVIESK*SPNFLP
Trigger: AGGTAGGAAGTTAGGAGATCATTTACTTTCAATCAC...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR TCA 90 bp TCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGAAGTTCTCCTCCCTTGTaGTTGAAAGTAAATGATCTC +
Preference number: 4 (lower is better)
Translates to: SGFTGHRGVPGIYCSVPGSSPPL*LKVNDL
Trigger: GAGATCATTTACTTTCAATCACAAGGGAGGAGAACT...TCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR TCA 90 bp AAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGACCCCATCTTCCAGATaGAGTCACAGCAAATCTCAG +
Preference number: 4 (lower is better)
Translates to: KPSAFYARPQQTIQPRSKTPSSR*SHSKSQ
Trigger: CTGAGATTTGCTGTGACTTCATCTGGAAGATGGGGT...CTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR GCA 90 bp TGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCACATGAAAAGGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: CPRLYILSLLHRASSHEKGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...CTTTTCATGTGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461402.5
ENST00000489170.5
CDS-3UTR GCA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp TTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGAGCTGGCCCTTTCCATaGAGCTGGAGTTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FTIDLLTATTRQVCWSQVSWPFP*SWSSAV
Trigger: GACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCT...CACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGATAACTGTCTCCAGCTaGCCCCGTCTGTATATCCTG +
Preference number: 4 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGITVSS*PRLYIL
Trigger: CAGGATATACAGACGGGGGCAGCTGGAGACAGTTAT...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp TCTGTATGGCCTTCCACCTCCTCTTGTCTGTTTACCATAGATTTATTGACAGCTCCTCTGCCATGTTCCTaGAGGCGTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SVWPSTSSCLFTIDLLTAPLPCS*RRQGLS
Trigger: AGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGG...AGCTGTCAATAAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGCCATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp TTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGAGTTTCTTCCTTCCTTaGGGTTGGGGACCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FTIDLLTATTRQVCWSQVSFFLP*GWGPPG
Trigger: GCCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACT...CACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGTCTTATTGTGATCCATaGGGTAGCTGTTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: CISGSKSAAGPFHAAGVLSYCDP*GSCYPH
Trigger: ATGGGGATAACAGCTACCTCATGGATCACAATAAGA...CAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR GCA 90 bp TCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: SPKEPDRIKPSAFYARPQGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...CTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461402.5
ENST00000489170.5
CDS-3UTR GCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGCATCACCCAGTGCTaGCTCCCCTCTTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESGITQC*LPSLGV
Trigger: AACTCCTAAAGAGGGGAGGCAGCACTGGGTGATGCC...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGTCCATGGGAGCAGAATaGTCAGACACAAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQSMGAE*SDTKPA
Trigger: TGCCGGCTTTGTGTCTGAGCATTCTGCTCCCATGGA...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CCA 90 bp AAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGAGTTATAGGAGTATATaGAGCTCCCCACCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KPSAFYARPQQTIQPRSKSYRSI*SSPPKE
Trigger: TTCCTTCGGTGGGGAGCTCCATATACTCCTATAACT...CTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
3UTR CAA 72 bp CCTTCCACCTCCTCTTGTCTGTTTACCATAGATTTATaGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSTSSCLFTIDL*TATTRQVCWSQ
Trigger: CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGACAAGAGGAGGTGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGCTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: FTIDLLTATTRQVCWSQVLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...CACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGCTGTCGATGCCAAGGTaGGGTAATAGAGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQLSMPR*GNREGI
Trigger: GATCCCTTCTCTATTACCTCACCTTGGCATCGACAG...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR GCA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGCAGTCCATGGAACCTaGCACCATGATAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQAVHGT*HHDSPD
Trigger: ATCTGGACTATCATGGTGGCAGGTTCCATGGACTGC...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR GCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAAGACAGCTCATTTCCTaGATCTGCCACTCCGACGCA +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESRQLIS*ICHSDA
Trigger: TGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCT...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCACCCTTTCCATGCAGCTaGAGTTCTGCAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESPFPCS*SSAVHG
Trigger: TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGG...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAAAATTCCTATCACGGTaGGCACCATGCCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESKFLSR*APCQQL
Trigger: CAGTTGCTGGCATGGTGCTCACCGTGATAGGAATTT...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR TCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCACAGGGCCTCATCACATaGAAAGAAGCACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESQGLIT*KEAPGK
Trigger: CTTTCCAGGTGCTTCTTTTCATGTGATGAGGCCCTG...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR GCA 90 bp TCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTCAGATCTGTCGATaGCAAGGTGAGGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: SVYHRFIDSYYSPGVLESGQICR*QGEVIE
Trigger: CTCTATTACCTCACCTTGGCATCGACAGATCTGACC...TGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
CDS TCA 90 bp AGGGTCTTCATCTCCTGTAGCAACTGCTGGGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCGGAGGCCCGCTTCAGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RVFISCSNCWAQVGS*TRCRPAEARFSSGC
Trigger: GCAGCCGCTGCTGAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGAGATGAAGACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000487174.1
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp AGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCCCAGCTCTGCCATCTaGAGAGCCAGCAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: STSAGLTGYTAASSALPVPSSAI*RASSSR
Trigger: TCTGGAGCTGCTGGCTCTCAAGATGGCAGAGCTGGG...AACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CAA 90 bp GGAGGGTCTGAGCTCAGCCATGCCAGTAGGAGCTGGTACAGGGCTGGAGGAAGGGCTGGGGCAGAAAGGTaGCTGAGGGTGAGCGTAGAG +
Preference number: 5 (lower is better)
Translates to: GGSELSHASRSWYRAGGRAGAER*LRVSVE
Trigger: CTCTACGCTCACCCTCAGCAACCTTTCTGCCCCAGC...CCTTCCTCCAGCCCTGTACCAGCTCCTACTGGCATGGCTGAGCTCAGACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CAA 90 bp CAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTCTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: QSGFTGHRGVPGIYCSVPLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...AGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp ACTGTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCACTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TVSSCPRLYILSLLHRASLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...TGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CTTTGTGAAGACAGACGGTGTCTCCTCTGCCATGTTCCTGCAGGCGTCAGGGGCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LCEDRRCLLCHVPAGVRGQFLPS*GLGTSW
Trigger: CCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTG...GCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTGGTCCCTGCTGTTGTaGGGGATGTCCATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCWSLLL*GMSMGA
Trigger: TGCTCCCATGGACATCCCCAACAACAGCAGGGACCA...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCGGTTGGTCCCTGCTGTaGTTGGGGATGTCCATGGGA +
Preference number: 5 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCGWSLL*LGMSMG
Trigger: TCCCATGGACATCCCCAACAACAGCAGGGACCAACC...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTTAGCCTCCAGCAGCTaGTTCCTCAGGAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: HLLSLASSSLFLRSQHLRLASSS*FLRSQH
Trigger: GTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAA...GCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CAA 90 bp CTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAGCTGGGGCAGAAAGGTaGCTGAGGGTGAGCGTAGAG +
Preference number: 5 (lower is better)
Translates to: LKVCSWPFPCSWSSAVHGAGAER*LRVSVE
Trigger: CTCTACGCTCACCCTCAGCAACCTTTCTGCCCCAGC...TCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CAA 90 bp GGGGAAGCACAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GEAQSGFTGHRGVPGIYCPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...GCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTGTGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GLPFAFLAQSLQLALSMQQFLPS*GLGTSW
Trigger: CCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTG...CTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491434.5
CDS-3UTR CAA 90 bp GAGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCTGGTCCCTGCTGTTGTaGGGGATGTCCATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: EAARREDVLCEDRRCLLCWSLLL*GMSMGA
Trigger: TGCTCCCATGGACATCCCCAACAACAGCAGGGACCA...GCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GTCTCCAGCTGCCCCCGTCTGTATATCCTGTCCCTTCTTCACAGGGCCTCATCATGGTCCCTGCTGTTGTaGGGGATGTCCATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: VSSCPRLYILSLLHRASSWSLLL*GMSMGA
Trigger: TGCTCCCATGGACATCCCCAACAACAGCAGGGACCA...TGATGAGGCCCTGTGAAGAAGGGACAGGATATACAGACGGGGGCAGCTGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS GCA 90 bp GCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTaGCATGTTCCTGCAGGCGTCAGGGGCTCTCTGAAGCCTGAACTT +
Preference number: 5 (lower is better)
Translates to: ARREDVLCEDRRCLL*HVPAGVRGSLKPEL
Trigger: AAGTTCAGGCTTCAGAGAGCCCCTGACGCCTGCAGGAACATGGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495091.5
CDS-3UTR CAA 90 bp ATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGGCTGGGGCAGAAAGGTaGCTGAGGGTGAGCGTAGAG +
Preference number: 5 (lower is better)
Translates to: ISGSKSAAGPFHAAGVLQAGAER*LRVSVE
Trigger: CTCTACGCTCACCCTCAGCAACCTTTCTGCCCCAGC...CTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCACCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
ENST00000491434.5
CDS-3UTR CAA 90 bp GACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCCACCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: DSSFPASATPTHLLPSVPPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...TGGAACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CAA 90 bp GCAGCCCTGGCTGTGGGGGCTATTTCCTTATGGGATTCTCTGGCCAGAGAAAGGCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: AALAVGAISLWDSLARERPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...CCTTTCTCTGGCCAGAGAATCCCATAAGGAAATAGCCCCCACAGCCAGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CAA 90 bp TCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCTGGAAACTGGCAGCCTaGGGCCCCAGGAACAGTTCT +
Preference number: 5 (lower is better)
Translates to: SAFYARPQQTIQPRSKLPWKLAA*GPRNSS
Trigger: AGAACTGTTCCTGGGGCCCAAGGCTGCCAGTTTCCA...GGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR CAA 90 bp CTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCCAGACAGAGGAGCCCTaGGATCAGGTAAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LCQTPADHSAKKQAPHTLQTEEP*DQVSCW
Trigger: CCAACAGCTTACCTGATCCAAGGGCTCCTCTGTCTG...GAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS CCA 90 bp GATGGGAAAAGGCCGTGTCCTCACCCACTCTGGGGAGATGGGTTCTaGGAAGGAACTAACACAGGTATGTCGAGATCCACAGAGCTGCGT +
Preference number: 5 (lower is better)
Translates to: DGKRPCPHPLWGDGF*EGTNTGMSRSTELR
Trigger: ACGCAGCTCTGTGGATCTCGACATACCTGTGTTAGTTCCTTCCCAGAACCCATCTCCCCAGAGTGGGTGAGGACACGGCCTTTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373593.5
ENST00000466796.1
CDS-3UTR CAA 90 bp CCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTCCATCAAAGGGTAGACTGTaGCCCCTGGGTCTTACTCAC +
Preference number: 5 (lower is better)
Translates to: PEASRLHFWLKVCSWPFPSKGRL*PLGLTH
Trigger: GTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGA...TGGAAAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CAA 90 bp CTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGTTGGTTGGTCCCTGCTGTaGTTGGGGATGTCCATGGGA +
Preference number: 5 (lower is better)
Translates to: LAILTAPFCMAFHLLLSVGWSLL*LGMSMG
Trigger: TCCCATGGACATCCCCAACAACAGCAGGGACCAACC...AACAGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTAATAGACAGCTCTCAAAGGGTAGACTGTaGCCCCTGGGTCTTACTCAC +
Preference number: 5 (lower is better)
Translates to: VRISAYLMGGAGKANRQLSKGRL*PLGLTH
Trigger: GTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGA...GAGCTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CAA 90 bp GGAGGGTCTGAGCTCAGCCATGCCAGTAGGAGCTGGTACAGGGCTGGAGGAAGGGCAGCTGAACAGCACTaGAAGGTTACAAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: GGSELSHASRSWYRAGGRAAEQH*KVTKLF
Trigger: AAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGC...CCTTCCTCCAGCCCTGTACCAGCTCCTACTGGCATGGCTGAGCTCAGACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373593.5
CDS-3UTR CAA 90 bp TCTCAGCTGCCCTTTGACAGTGACATAGGTTGGTCCCTGCTGTTGTTGGGGATGCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: SQLPFDSDIGWSLLLLGMPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...CATCCCCAACAACAGCAGGGACCAACCTATGTCACTGTCAAAGGGCAGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp TTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCACCATGATAGTCCAGCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: FHAAGVLQSMEPATMIVQPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...CTGGACTATCATGGTGGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CAA 90 bp AATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCCTCGGTTCAAAGGGTAGACTGTaGCCCCTGGGTCTTACTCAC +
Preference number: 5 (lower is better)
Translates to: NRQLISCICHSDAPSSLGSKGRL*PLGLTH
Trigger: GTGAGTAAGACCCAGGGGCAACAGTCTACCCTTTGA...ACCGAGGGAAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309777.11
ENST00000373593.5
CDS-3UTR CAA 90 bp GCAAGGCTAATAGACAGCTCATTTCCTGCATCTGCCACTCCGACGCACCTTCTTCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: ARLIDSSFPASATPTHLLPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...AAGAAGGTGCGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CAA 90 bp GAGGGGCTGGCAGTGAGGATTTCTGCCTACCTCATGGGTGGGGCAGGCAAGGCTTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: EGLAVRISAYLMGGAGKAFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...AGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
CDS-3UTR CAA 90 bp AACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCCAGTTTCTTCCTTCCTaGGGGTTGGGGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NQTELSHLLSMPDPSRPFQFLPS*GLGTSW
Trigger: CCAGGAGGTCCCCAACCCCAAGGAAGGAAGAAACTG...GAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCGGTCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp ACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGGTACTCTGGCCACCTTTaGTCCTTAGCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TIDLLTATTRQVCWSQVGYSGHL*SLASSS
Trigger: GCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGAGTA...CCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CAA 90 bp TCTGCAGCTGGCCCTTTCCATGCAGCTGGAGTTCTGCAGTCCATGGAACCTGCCGCAGCTGAACAGCACTaGAAGGTTACAAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: SAAGPFHAAGVLQSMEPAAAEQH*KVTKLF
Trigger: AAAGAGTTTTGTAACCTTCAAGTGCTGTTCAGCTGC...GGCAGGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000484490.1
CDS-3UTR CAA 90 bp TACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGGTGGGCCAGAGGCCTCCCGTTaGCATTTCTGGCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: YHRFIDSYYSPGVLESGGPEASR*HFWLKV
Trigger: GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGG...CCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp AGGCAGCAAGGAGGGAGGACGTACTTTGTGAAGACAGACGGTGTCTCCTCTGCCGCCTTCCACCTCCTCTaGTCTGTTTACCATAGATTT +
Preference number: 5 (lower is better)
Translates to: RQQGGRTYFVKTDGVSSAAFHLL*SVYHRF
Trigger: AAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGC...GGCAGAGGAGACACCGTCTGTCTTCACAAAGTACGTCCTCCCTCCTTGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CAGTCTGGTTTCACTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGCCTTCCACCTCCTCTaGTCTGTTTACCATAGATTT +
Preference number: 5 (lower is better)
Translates to: QSGFTGHRGVPGIYCSVPAFHLL*SVYHRF
Trigger: AAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGC...AGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAGTGAAACCAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp GAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCAGCTGGCCCTTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: ESQRPPVCISGSKSAAGPFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...AGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: HLLSLASSSLFLRSQHLRFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...GCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483001.5
CDS-3UTR CAA 90 bp CCTTCCACCTCCTCTTGTCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCTTCCTTCCTTGGGGTaGGGGACCTCCTGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: PSTSSCLFTIDLLTATTRLPSLG*GTSWLR
Trigger: TCTCAGCCAGGAGGTCCCCAACCCCAAGGAAGGAAG...GCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGACAAGAGGAGGTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp TGTCTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTGGTTGGTCCCTGCTGTaGTTGGGGATGTCCATGGGA +
Preference number: 5 (lower is better)
Translates to: CLFTIDLLTATTRQVCWSGWSLL*LGMSMG
Trigger: TCCCATGGACATCCCCAACAACAGCAGGGACCAACC...ACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CTGGGCATCGAGGAGTGCCAGGCATCTACTGCTCTGTCCCTGGATAAGTCAGGCATGAAAAGAAGCACCTaGTTAAATGAGGAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LGIEECQASTALSLDKSGMKRST*LNEEAV
Trigger: AACTGCTTCCTCATTTAACAAGGTGCTTCTTTTCAT...GCCTGACTTATCCAGGGACAGAGCAGTAGATGCCTGGCACTCCTCGATGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489170.5
ENST00000491434.5
CDS CCA 90 bp GATGATAGCCAGAGAGTTACAGATGGGCACAGCCAGGGTCAGATCTaGGTGGTCAGAATGAAAAGAATGCCTGAGATGCAACAAATGCCT +
Preference number: 5 (lower is better)
Translates to: DDSQRVTDGHSQGQI*VVRMKRMPEMQQMP
Trigger: AGGCATTTGTTGCATCTCAGGCATTCTTTTCATTCTGACCACCCAGATCTGACCCTGGCTGTGCCCATCTGTAACTCTCTGGCTATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485689.1
CDS-3UTR CAA 90 bp GCTCTGACTGAGTCCCAGAGGCCTCCCGTTTGCATTTCTGGCTCAAAGTCTGCATTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: ALTESQRPPVCISGSKSAFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...TGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309777.11
ENST00000373593.5
ENST00000491434.5
CDS-3UTR CAA 90 bp AGGCTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: RLAILTAPFCMAFHLLLSFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...AGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS TCA 90 bp GAGTTACAGATGGGCACAGCCAGGGTCAGATCTGGGTGGTCAGAATaGAAAGAATGCCTGAGATGCAACAAATGCCTTTCTAGGCACAAA +
Preference number: 5 (lower is better)
Translates to: ELQMGTARVRSGWSE*KECLRCNKCLSRHK
Trigger: TTTGTGCCTAGAAAGGCATTTGTTGCATCTCAGGCATTCTTTTCATTCTGACCACCCAGATCTGACCCTGGCTGTGCCCATCTGTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485689.1
CDS-3UTR CAA 90 bp CTGGCCATACTCACGGCTCCATTCTGTATGGCCTTCCACCTCCTCTTGTCTGTTTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LAILTAPFCMAFHLLLSVFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...AACAGACAAGAGGAGGTGGAAGGCCATACAGAATGGAGCCGTGAGTATGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAGCCTTCCACCTCCTCTaGTCTGTTTACCATAGATTT +
Preference number: 5 (lower is better)
Translates to: RIKPSAFYARPQQTIQPRAFHLL*SVYHRF
Trigger: AAATCTATGGTAAACAGACAAGAGGAGGTGGAAGGC...TCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461402.5
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAGGATCAGGTAAGCTGTaGGATCAGGAAACAGTATGT +
Preference number: 5 (lower is better)
Translates to: RIKPSAFYARPQQTIQPRGSGKL*DQETVC
Trigger: ACATACTGTTTCCTGATCCAACAGCTTACCTGATCC...TCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTTAATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461402.5
CDS-3UTR CAA 90 bp AAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGATGAAAAGAAGCACCTaGTTAAATGAGGAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: KPSAFYARPQQTIQPRSKMKRST*LNEEAV
Trigger: AACTGCTTCCTCATTTAACAAGGTGCTTCTTTTCAT...CTTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489170.5
ENST00000491434.5
CDS-3UTR CAA 90 bp CTGTTTACCATAGATTTATTGACAGCTACTACTCGCCAGGTGTGCTGGAGTCAGTTTACCATAGATTTATaGACAGCTACTACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LFTIDLLTATTRQVCWSQFTIDL*TATTRQ
Trigger: CTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAA...CTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000489170.5
ENST00000491434.5
CDS GCA 72 bp GCAGGCCGGCGGAGGCCCGCTTCAGCAGCGGCTGCGTaGCACCCCACAGAGCGGCCACCAGCACCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: AGRRRPASAAAA*HPTERPPAPEP
Trigger: TGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCGGGCCTCCGCCGGCCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000487174.1
ENST00000489170.5
ENST00000491434.5
CDS GCA 72 bp CGCTGCAGGCCGGCGGAGGCCCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGAGCGGCCACCAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: RCRPAEARFSSG*VPPHRAATSTR
Trigger: TCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCTGAAGCGGGCCTCCGCCGGCCTGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000487174.1
ENST00000489170.5
ENST00000491434.5
CDS TCA 72 bp ATCTCCTGTAGCAACTGCTGGGCCCAGGTCGGCTCATaGACCCGCTGCAGGCCGGCGGAGGCCCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ISCSNCWAQVGS*TRCRPAEARFS
Trigger: GCTGAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309777.11
ENST00000344461.7
ENST00000373593.5
ENST00000461402.5
ENST00000483001.5
ENST00000487174.1
ENST00000489170.5
ENST00000491434.5
CDS GCA 72 bp CCCCACAGAGCGGCCACCAGCACCAGAGCCAACACCTaGCCTGAATGCAGACGAGTGAGTCACCCTGACCCC +
Preference number: 6 (lower is better)
Translates to: PHRAATSTRANT*PECRRVSHPDP
Trigger: GGGGTCAGGGTGACTCACTCGTCTGCATTCAGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487174.1
CDS TCA 72 bp CTGGCGGCTAAGGCAGGCCCAGGGAAGCTAGGGAGATaGATCCAGGAGTCCGGCCTCTGGGGTTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: LAAKAGPGKLGR*IQESGLWGCSR
Trigger: CCTGCTACAACCCCAGAGGCCGGACTCCTGGATTCATCTCCCTAGCTTCCCTGGGCCTGCCTTAGCCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487174.1
CDS CCA 72 bp CAGGAAATGAATTCGAGGCGAGGGTCGGGAAATCCATaGAAGGGCGGGGCCGGCTACCTACCCAGAGACGCC +
Preference number: 6 (lower is better)
Translates to: QEMNSRRGSGNP*KGGAGYLPRDA
Trigger: GGCGTCTCTGGGTAGGTAGCCGGCCCCGCCCTTCCATGGATTTCCCGACCCTCGCCTCGAATTCATTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487174.1
CDS CCA 72 bp TGGGCACAGCCAGGGTCAGATCCAGAGACGCCGCCATaGCAACGCCGCTGTCTTCTACTTCCGGGAACGAAG +
Preference number: 6 (lower is better)
Translates to: WAQPGSDPETPP*QRRCLLLPGTK
Trigger: CTTCGTTCCCGGAAGTAGAAGACAGCGGCGTTGCCATGGCGGCGTCTCTGGATCTGACCCTGGCTGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484490.1
CDS TCA 72 bp GGGGTCGGGGTTAGAGGGTGGATGTGGAGCAGGAAATaGATTCGAGGCGAGGGTCGGGAAATCCATGGAAGG +
Preference number: 6 (lower is better)
Translates to: GVGVRGWMWSRK*IRGEGREIHGR
Trigger: CCTTCCATGGATTTCCCGACCCTCGCCTCGAATTCATTTCCTGCTCCACATCCACCCTCTAACCCCGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487174.1
CDS CCA 72 bp CTGGTACAGGGCTGGAGGAAGGGCTCAGATGGGGTCTaGTCTTCAATCCCAAACCCCAGCCTCTGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LVQGWRKGSDGV*SSIPNPSLCLS
Trigger: AGAAAGACAGAGGCTGGGGTTTGGGATTGAAGACCAGACCCCATCTGAGCCCTTCCTCCAGCCCTGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373593.5
ENST00000466796.1
CDS TCA 72 bp CTGTCTTTCTCCAGACTGTCCAGGGGAAGGGAACTCTaGTGGCCACAAGGAAGCAAAACAGCTGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: LSFSRLSRGREL*WPQGSKTAAEE
Trigger: TTCCTCTGCAGCTGTTTTGCTTCCTTGTGGCCATCAGAGTTCCCTTCCCCTGGACAGTCTGGAGAAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373593.5
ENST00000466796.1
CDS TCA 72 bp ATGGGCACAGCCAGGGTCAGATCTGGGTGGTCAGAATaGAAAGAATGCCTGAGATGCAACAAATGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: MGTARVRSGWSE*KECLRCNKCLS
Trigger: AGAAAGGCATTTGTTGCATCTCAGGCATTCTTTTCATTCTGACCACCCAGATCTGACCCTGGCTGTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485689.1