Pregenerated sensors for TMEM18-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000233296Ensembl transcript IDs: ENST00000435573.1, ENST00000445418.1, ENST00000668697.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCCTCCTCTGTGGATTCTGGCCAGGCCGGGTTCGGCGGTTGCTGTaGGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ALLCGFWPGRVRRLL*ERASQHHAVRLLCQ Trigger: CTGACAGAGAAGGCGGACGGCATGGTGTTGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCTGGCCAGAATCCACAGAGGAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | TTGGCGCCCTCCTCTGTGGATTCTGGCCAGGCCGGGTTCGGCGGTTaGTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LAPSSVDSGQAGFGG*CESGLPNTMPSAFS Trigger: AGAGAAGGCGGACGGCATGGTGTTGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCTGGCCAGAATCCACAGAGGAGGGCGCCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | AGGCCGGGTTCGGCGGTTGCTGTGAGAGCGGGCTTCCCAACACCATaGCGTCCGCCTTCTCTGTCAGCTCTTTCCCCGTCAGCATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RPGSAVAVRAGFPTP*RPPSLSALSPSASQ Trigger: CTGGGATGCTGACGGGGAAAGAGCTGACAGAGAAGGCGGACGGCATGGTGTTGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 90 bp | CTTGCTGTGCTCAGAGGTGGAGCTTCCTGCTGTATCCCTGCTCAGTaGCGGGAATCAGGGCCTGCACCCACCACCAGGATGAATCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LAVLRGGASCCIPAQ*RESGPAPTTRMNPA Trigger: GGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGATTCCCGTCACTGAGCAGGGATACAGCAGGAAGCTCCACCTCTGAGCACAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 90 bp | TCCCTGCTCAGTGACGGGAATCAGGGCCTGCACCCACCACCAGGATaGATCCTGCCTTGCCGCGATTTTACAGCTGCAGCGAAGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: SLLSDGNQGLHPPPG*ILPCRDFTAAAKDS Trigger: ACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGATTCCCGTCACTGAGCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | CAATCCCCTTGCTGTGCTCAGAGGTGGAGCTTCCTGCTGTATCCCTaGTCAGTGACGGGAATCAGGGCCTGCACCCACCACCAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: QSPCCAQRWSFLLYP*SVTGIRACTHHQDE Trigger: TTCATCCTGGTGGTGGGTGCAGGCCCTGATTCCCGTCACTGAGCAGGGATACAGCAGGAAGCTCCACCTCTGAGCACAGCAAGGGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | TCAGTGACGGGAATCAGGGCCTGCACCCACCACCAGGATGAATCCTaGCTTGCCGCGATTTTACAGCTGCAGCGAAGGACAGTTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SVTGIRACTHHQDES*LAAILQLQRRTVLQ Trigger: TTGCAGAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGATTCCCGTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 90 bp | CAGACACACTCAGAATCAGAACAATCCCCTTGCTGTGCTCAGAGGTaGAGCTTCCTGCTGTATCCCTGCTCAGTGACGGGAATCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QTHSESEQSPCCAQR*SFLLYPCSVTGIRA Trigger: GGCCCTGATTCCCGTCACTGAGCAGGGATACAGCAGGAAGCTCCACCTCTGAGCACAGCAAGGGGATTGTTCTGATTCTGAGTGTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | CACCGCTCTAGCAAACAGACACACTCAGAATCAGAACAATCCCCTTaGTGTGCTCAGAGGTGGAGCTTCCTGCTGTATCCCTGCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HRSSKQTHSESEQSP*CAQRWSFLLYPCSV Trigger: CACTGAGCAGGGATACAGCAGGAAGCTCCACCTCTGAGCACAGCAAGGGGATTGTTCTGATTCTGAGTGTGTCTGTTTGCTAGAGCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | GCACCCACCACCAGGATGAATCCTGCCTTGCCGCGATTTTACAGCTaGAGCGAAGGACAGTTCTGCAATCATGGGAAGTCTAATGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: APTTRMNPALPRFYS*SEGQFCNHGKSNVQ Trigger: CTGAACATTAGACTTCCCATGATTGCAGAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 90 bp | CTCCTACAGGGCAGCATAGAAGCATTTAGGGAATGTGTCCATCTCTaGATTTCTGCTTCCCATGGTGGCCAAGTGAGCCCGTCTAATGTC | + |
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Preference number: 5 (lower is better) Translates to: LLQGSIEAFRECVHL*ISASHGGQVSPSNV Trigger: GACATTAGACGGGCTCACTTGGCCACCATGGGAAGCAGAAATCCAGAGATGGACACATTCCCTAAATGCTTCTATGCTGCCCTGTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 90 bp | AATCCTGCCTTGCCGCGATTTTACAGCTGCAGCGAAGGACAGTTCTaGAATCATGGGAAGTCTAATGTTCAGTCCTCATCTGGTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: NPALPRFYSCSEGQF*NHGKSNVQSSSGLG Trigger: ACCAAGACCAGATGAGGACTGAACATTAGACTTCCCATGATTGCAGAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 90 bp | AGAGGGAAGAATGCATCTGAGTGCTGGTGCAAATCACACAAGCTTTaGAATTGGCCAAGTCAGACACCAAACTATGCTTCCAGCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: RGKNASECWCKSHKL*NWPSQTPNYASSAH Trigger: GTGAGCGCTGGAAGCATAGTTTGGTGTCTGACTTGGCCAATTCCAAAGCTTGTGTGATTTGCACCAGCACTCAGATGCATTCTTCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 90 bp | GTCCCTCCCATGACACATGGGGATTATGGGAGCTACAATTCAAGATaGGATTTGGGTGGGGACACAGGCAAACTGTATCACTCATTAAGG | + |
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Preference number: 5 (lower is better) Translates to: VPPMTHGDYGSYNSR*DLGGDTGKLYHSLR Trigger: CCTTAATGAGTGATACAGTTTGCCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAGCTCCCATAATCCCCATGTGTCATGGGAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 90 bp | GACGCCATGCCATGCGGAGTTGCCAAAACACCAACAGGAAACCCTTaGTCTTTCCCTCCTGAAGAAATTGGGAATATGCCTGCTAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: DAMPCGVAKTPTGNP*SFPPEEIGNMPAKN Trigger: ATTTTTAGCAGGCATATTCCCAATTTCTTCAGGAGGGAAAGACCAAGGGTTTCCTGTTGGTGTTTTGGCAACTCCGCATGGCATGGCGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 90 bp | CAGTTTGAACAGTTGGCTATGTTTGATTGGCCGAAACTCAGTGACTaGCACAAGTGTAGGCTACGGTCTACTTACACCTCTCCTTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: QFEQLAMFDWPKLSD*HKCRLRSTYTSPCY Trigger: ATAACAAGGAGAGGTGTAAGTAGACCGTAGCCTACACTTGTGCCAGTCACTGAGTTTCGGCCAATCAAACATAGCCAACTGTTCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS TCA 90 bp | GAGGCTCCAGCACAACCATTTGGTTGGAAGAAGATTTATGGACATTaGAGGGACATTGGATTGGTTATGGCTCAGCATTTGCCTTATTTG | + |
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Preference number: 5 (lower is better) Translates to: EAPAQPFGWKKIYGH*RDIGLVMAQHLPYL Trigger: CAAATAAGGCAAATGCTGAGCCATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGCTGGAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CCA 90 bp | ACAACCATTTGGTTGGAAGAAGATTTATGGACATTGAAGGGACATTaGATTGGTTATGGCTCAGCATTTGCCTTATTTGAACACAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TTIWLEEDLWTLKGH*IGYGSAFALFEHSL Trigger: CAAACTGTGTTCAAATAAGGCAAATGCTGAGCCATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS TCA 72 bp | TGTGGATTCTGGCCAGGCCGGGTTCGGCGGTTGCTGTaGGAGCGGGCTTCCCAACACCATGCCGTCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: CGFWPGRVRRLL*ERASQHHAVRL Trigger: AAGGCGGACGGCATGGTGTTGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCTGGCCAGAATCCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 72 bp | TCCTCTGTGGATTCTGGCCAGGCCGGGTTCGGCGGTTaGTGTGAGAGCGGGCTTCCCAACACCATGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSVDSGQAGFGG*CESGLPNTMPS Trigger: GGACGGCATGGTGTTGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCTGGCCAGAATCCACAGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 72 bp | AGCTGCATGCACAGCGGCGTCCCGGATGGGGTCCCGTaGTTCTGGGGGTCACATGTGGAGCTCCAGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SCMHSGVPDGVP*FWGSHVELQLQ Trigger: CTGAAGCTGGAGCTCCACATGTGACCCCCAGAAGCACGGGACCCCATCCGGGACGCCGCTGTGCATGCAGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435573.1 |
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| CDS CCA 72 bp | CAGATCTCACGAGAGAGGATTTGGCGCCCTCCTCTGTaGATTCTGGCCAGGCCGGGTTCGGCGGTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QISRERIWRPPL*ILARPGSAVAV Trigger: CACAGCAACCGCCGAACCCGGCCTGGCCAGAATCCACAGAGGAGGGCGCCAAATCCTCTCTCGTGAGATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 72 bp | TGCTGTGCTCAGAGGTGGAGCTTCCTGCTGTATCCCTaGTCAGTGACGGGAATCAGGGCCTGCACCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: CCAQRWSFLLYP*SVTGIRACTHH Trigger: GTGGTGGGTGCAGGCCCTGATTCCCGTCACTGAGCAGGGATACAGCAGGAAGCTCCACCTCTGAGCACAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 72 bp | AGTGACGGGAATCAGGGCCTGCACCCACCACCAGGATaGATCCTGCCTTGCCGCGATTTTACAGCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SDGNQGLHPPPG*ILPCRDFTAAA Trigger: CGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGATTCCCGTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | AGTTTCGTGAGAAGGGCAGATCTCACGAGAGAGGATTaGGCGCCCTCCTCTGTGGATTCTGGCCAGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SFVRRADLTRED*APSSVDSGQAG Trigger: CCCGGCCTGGCCAGAATCCACAGAGGAGGGCGCCAAATCCTCTCTCGTGAGATCTGCCCTTCTCACGAAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 72 bp | GGAATCAGGGCCTGCACCCACCACCAGGATGAATCCTaGCTTGCCGCGATTTTACAGCTGCAGCGAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: GIRACTHHQDES*LAAILQLQRRT Trigger: TGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | TCCTCTTCTCTCCAGGGCCAGCCTCCACTACATGCCTaGCCACACCAGCCATCAGGGATTTGGTCTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSLQGQPPLHA*PHQPSGIWSGL Trigger: AAGACCAGACCAAATCCCTGATGGCTGGTGTGGCCAGGCATGTAGTGGAGGCTGGCCCTGGAGAGAAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435573.1 |
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| CDS CAA 72 bp | TCAGGGCCTGCACCCACCACCAGGATGAATCCTGCCTaGCCGCGATTTTACAGCTGCAGCGAAGGACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGPAPTTRMNPA*PRFYSCSEGQF Trigger: GAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGTGGTGGGTGCAGGCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | ATGCACAGCGGCGTCCCGGATGGGGTCCTGAGAATGTaGATTCCGAGTCGCTACAGTGGCTTCCAGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MHSGVPDGVLRM*IPSRYSGFQEL Trigger: CAACTCCTGGAAGCCACTGTAGCGACTCGGAATCAACATTCTCAGGACCCCATCCGGGACGCCGCTGTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 90 bp | GACAGCTGCATGCACAGCGGCGTCCCGGATGGGGTCCTGAGAATGTaGATTCCGAGTCGCTACAGTGGCTTCCAGGAGTTGTCGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: DSCMHSGVPDGVLRM*IPSRYSGFQELSTF Trigger: AAAAGTCGACAACTCCTGGAAGCCACTGTAGCGACTCGGAATCAACATTCTCAGGACCCCATCCGGGACGCCGCTGTGCATGCAGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CCA 72 bp | ATGGCAGAAGGGGAAGCAAACACATCCTTCTTCACGTaGCGGCAGCAAGGAGAAGTGCCCAGCAAAAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: MAEGEANTSFFT*RQQGEVPSKRG Trigger: CCCCCTTTTGCTGGGCACTTCTCCTTGCTGCCGCCACGTGAAGAAGGATGTGTTTGCTTCCCCTTCTGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | CTCATTGCTCCCACAGCAACAGGTAACTCTCCCCTGTaGTCTCTCCATCTAAACAATCAGCTGCCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LIAPTATGNSPL*SLHLNNQLPAG Trigger: CCCAGCAGGCAGCTGATTGTTTAGATGGAGAGACCACAGGGGAGAGTTACCTGTTGCTGTGGGAGCAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | GGCAGCATAGAAGCATTTAGGGAATGTGTCCATCTCTaGATTTCTGCTTCCCATGGTGGCCAAGTGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GSIEAFRECVHL*ISASHGGQVSP Trigger: CGGGCTCACTTGGCCACCATGGGAAGCAGAAATCCAGAGATGGACACATTCCCTAAATGCTTCTATGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | CAAGATACCCGAGTCTCTTGCAGATTTGAGTCAGGATaGCTTCAGCCTAAGGAAGAGCTTGCTGGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QDTRVSCRFESG*LQPKEELAGLL Trigger: CAGGAGCCCAGCAAGCTCTTCCTTAGGCTGAAGCCATCCTGACTCAAATCTGCAAGAGACTCGGGTATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 90 bp | TCCTCATCTGGTCTTGGTACCTCTCCTTTCCTCCATAACTCCTCATaGCTCCCACAGCAACAGGTAACTCTCCCCTGTGGTCTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SSSGLGTSPFLHNSS*LPQQQVTLPCGLSI Trigger: GATGGAGAGACCACAGGGGAGAGTTACCTGTTGCTGTGGGAGCAATGAGGAGTTATGGAGGAAAGGAGAGGTACCAAGACCAGATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 72 bp | TCCATCTCTGGATTTCTGCTTCCCATGGTGGCCAAGTaGGCCCGTCTAATGTCACTCTCCTGCAGGGAATAT | + |
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Preference number: 6 (lower is better) Translates to: SISGFLLPMVAK*ARLMSLSCREY Trigger: ATATTCCCTGCAGGAGAGTGACATTAGACGGGCTCACTTGGCCACCATGGGAAGCAGAAATCCAGAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS GCA 72 bp | ACCAGGATGAATCCTGCCTTGCCGCGATTTTACAGCTaGAGCGAAGGACAGTTCTGCAATCATGGGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TRMNPALPRFYS*SEGQFCNHGKS Trigger: AGACTTCCCATGATTGCAGAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAAGGCAGGATTCATCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS TCA 72 bp | CCCATGAATAAACTACCACCCATGGGGTCCCTCCCATaGCACATGGGGATTATGGGAGCTACAATTCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PMNKLPPMGSLP*HMGIMGATIQD Trigger: ATCTTGAATTGTAGCTCCCATAATCCCCATGTGTCATGGGAGGGACCCCATGGGTGGTAGTTTATTCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | CCATGCGGAGTTGCCAAAACACCAACAGGAAACCCTTaGTCTTTCCCTCCTGAAGAAATTGGGAATATGCCT | + |
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Preference number: 6 (lower is better) Translates to: PCGVAKTPTGNP*SFPPEEIGNMP Trigger: AGGCATATTCCCAATTTCTTCAGGAGGGAAAGACCAAGGGTTTCCTGTTGGTGTTTTGGCAACTCCGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | TTTAGCACCCTCAAGATACCCGAGTCTCTTGCAGATTaGAGTCAGGATGGCTTCAGCCTAAGGAAGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSTLKIPESLAD*SQDGFSLRKSL Trigger: CAAGCTCTTCCTTAGGCTGAAGCCATCCTGACTCAAATCTGCAAGAGACTCGGGTATCTTGAGGGTGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS GCA 72 bp | TTGCCGCGATTTTACAGCTGCAGCGAAGGACAGTTCTaGAATCATGGGAAGTCTAATGTTCAGTCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LPRFYSCSEGQF*NHGKSNVQSSS Trigger: AGATGAGGACTGAACATTAGACTTCCCATGATTGCAGAACTGTCCTTCGCTGCAGCTGTAAAATCGCGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | TCTGTAGGCATGAATTCAGAGGTTGAAAGGCCATATTaGGGCAAAACCCTCAGATACTGCCTCCTCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SVGMNSEVERPY*GKTLRYCLLSV Trigger: CACACTGAGGAGGCAGTATCTGAGGGTTTTGCCCAAATATGGCCTTTCAACCTCTGAATTCATGCCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | AATGCATCTGAGTGCTGGTGCAAATCACACAAGCTTTaGAATTGGCCAAGTCAGACACCAAACTATGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NASECWCKSHKL*NWPSQTPNYAS Trigger: GGAAGCATAGTTTGGTGTCTGACTTGGCCAATTCCAAAGCTTGTGTGATTTGCACCAGCACTCAGATGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CCA 72 bp | ATAAACTACCACCCATGGGGTCCCTCCCATGACACATaGGGATTATGGGAGCTACAATTCAAGATGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: INYHPWGPSHDT*GLWELQFKMRF Trigger: AAATCTCATCTTGAATTGTAGCTCCCATAATCCCCATGTGTCATGGGAGGGACCCCATGGGTGGTAGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | CAGAGTAGGTTCAGAGGCTCCAGCACAACCATTTGGTaGGAAGAAGATTTATGGACATTGAAGGGACATTGG | + |
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Preference number: 6 (lower is better) Translates to: QSRFRGSSTTIW*EEDLWTLKGHW Trigger: CCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGCTGGAGCCTCTGAACCTACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CCA 72 bp | AGTCAGAGTAGGTTCAGAGGCTCCAGCACAACCATTTaGTTGGAAGAAGATTTATGGACATTGAAGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: SQSRFRGSSTTI*LEEDLWTLKGH Trigger: ATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGCTGGAGCCTCTGAACCTACTCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 90 bp | CCAAAACACCAACAGGAAACCCTTGGTCTTTCCCTCCTGAAGAAATaGGGAATATGCCTGCTAAAAATTGAGAAGGAAGGAGAGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: PKHQQETLGLSLLKK*GICLLKIEKEGENQ Trigger: CTGATTCTCTCCTTCCTTCTCAATTTTTAGCAGGCATATTCCCAATTTCTTCAGGAGGGAAAGACCAAGGGTTTCCTGTTGGTGTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 90 bp | CTTGGAATTTCTGTAGGCATGAATTCAGAGGTTGAAAGGCCATATTaGGGCAAAACCCTCAGATACTGCCTCCTCAGTGTGTTACTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LGISVGMNSEVERPY*GKTLRYCLLSVLLL Trigger: CAAAAGTAACACACTGAGGAGGCAGTATCTGAGGGTTTTGCCCAAATATGGCCTTTCAACCTCTGAATTCATGCCTACAGAAATTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 90 bp | CATTGGATTGGTTATGGCTCAGCATTTGCCTTATTTGAACACAGTTaGAACAGTTGGCTATGTTTGATTGGCCGAAACTCAGTGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: HWIGYGSAFALFEHS*NSWLCLIGRNSVTG Trigger: GCCAGTCACTGAGTTTCGGCCAATCAAACATAGCCAACTGTTCAAACTGTGTTCAAATAAGGCAAATGCTGAGCCATAACCAATCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 90 bp | CTTCTGAGTCAGAGTAGGTTCAGAGGCTCCAGCACAACCATTTGGTaGGAAGAAGATTTATGGACATTGAAGGGACATTGGATTGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LLSQSRFRGSSTTIW*EEDLWTLKGHWIGY Trigger: ATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGCTGGAGCCTCTGAACCTACTCTGACTCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 72 bp | CAACAGGAAACCCTTGGTCTTTCCCTCCTGAAGAAATaGGGAATATGCCTGCTAAAAATTGAGAAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: QQETLGLSLLKK*GICLLKIEKEG Trigger: TCCTTCCTTCTCAATTTTTAGCAGGCATATTCCCAATTTCTTCAGGAGGGAAAGACCAAGGGTTTCCTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445418.1 |
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| CDS CAA 72 bp | GCCTTATTTGAACACAGTTTGAACAGTTGGCTATGTTaGATTGGCCGAAACTCAGTGACTGGCACAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: ALFEHSLNSWLC*IGRNSVTGTSV Trigger: TACACTTGTGCCAGTCACTGAGTTTCGGCCAATCAAACATAGCCAACTGTTCAAACTGTGTTCAAATAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 90 bp | AGAGGCTCCAGCACAACCATTTGGTTGGAAGAAGATTTATGGACATaGAAGGGACATTGGATTGGTTATGGCTCAGCATTTGCCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: RGSSTTIWLEEDLWT*KGHWIGYGSAFALF Trigger: AAATAAGGCAAATGCTGAGCCATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGCTGGAGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS TCA 72 bp | GCACAACCATTTGGTTGGAAGAAGATTTATGGACATTaGAGGGACATTGGATTGGTTATGGCTCAGCATTTG | + |
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Preference number: 6 (lower is better) Translates to: AQPFGWKKIYGH*RDIGLVMAQHL Trigger: CAAATGCTGAGCCATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCAAATGGTTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CAA 72 bp | GGTTATGGCTCAGCATTTGCCTTATTTGAACACAGTTaGAACAGTTGGCTATGTTTGATTGGCCGAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: GYGSAFALFEHS*NSWLCLIGRNS Trigger: TGAGTTTCGGCCAATCAAACATAGCCAACTGTTCAAACTGTGTTCAAATAAGGCAAATGCTGAGCCATAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CCA 72 bp | TGGTTGGAAGAAGATTTATGGACATTGAAGGGACATTaGATTGGTTATGGCTCAGCATTTGCCTTATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WLEEDLWTLKGH*IGYGSAFALFE Trigger: TTCAAATAAGGCAAATGCTGAGCCATAACCAATCCAATGTCCCTTCAATGTCCATAAATCTTCTTCCAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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| CDS CCA 72 bp | TTGGCAGGGTGTAATAAAAATAGCACTTTACTTCTATaGTCTTCTTCCCCAAATTCCATAATCCCAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LAGCNKNSTLLL*SSSPNSIIPIR Trigger: TCTGATTGGGATTATGGAATTTGGGGAAGAAGACCATAGAAGTAAAGTGCTATTTTTATTACACCCTGCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668697.1 |
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