RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM179 (Homo sapiens)

Ensembl gene IDs: ENSG00000258986

Ensembl transcript IDs: ENST00000341595.7, ENST00000415614.6, ENST00000556320.1, ENST00000556573.6, ENST00000615269.4, ENST00000615704.1, ENST00000616017.1, ENST00000620158.1, ENST00000621393.1, ENST00000625335.2, ENST00000625459.1, ENST00000630378.2

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGCTCCCTCCTCTCTCAGGTGGATGCTGGGCGTGGGAGCCCATaGGAGGGGCAGAGGGGCTGTCCACACAGCACCCACGGCTCCCAT +
Preference number: 1 (lower is better)
Translates to: GSSLLSQVDAGRGSP*EGQRGCPHSTHGSH
Trigger: ATGGGAGCCGTGGGTGCTGTGTGGACAGCCCCTCTGCCCCTCCCATGGGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGGAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR CCA 90 bp CCGGCCAGGGTTGGGGGAGACAAGCTGGACGCCCTCCACATAGGCTaGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAG +
Preference number: 1 (lower is better)
Translates to: PARVGGDKLDALHIG*PVRSYWDSQGALCE
Trigger: CTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATGTGGAGGGCGTCCAGCTTGTCTCCCCCAACCCTGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR GCA 90 bp TCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACCCAGTCCACTaGCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACG +
Preference number: 1 (lower is better)
Translates to: SLHHPHQGAGTHPVH*QAHRWALGRSPHYT
Trigger: CGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGGACTGGGTGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR CCA 90 bp AAGAGCATTCAGGCCCACCCATGTCCAGCACCCTTGGAGGGCTCCTaGCCAGGAGAAGCGTCCTCAGGCCAGCCACGGCCAGCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: KSIQAHPCPAPLEGS*PGEASSGQPRPARA
Trigger: GGCTCTTGCTGGCCGTGGCTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGGGTGGGCCTGAATGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR CCA 90 bp CGTTCAGGGCTAAGTGACATCTGGCCACCCCTGGGCCAGCTGGCATaGAGACAGCATCCGGCCAGGGTTGGGGGAGACAAGCTGGACGCC +
Preference number: 1 (lower is better)
Translates to: RSGLSDIWPPLGQLA*RQHPARVGGDKLDA
Trigger: GGCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGCTGTCTCCATGCCAGCTGGCCCAGGGGTGGCCAGATGTCACTTAGCCCTGAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR CCA 90 bp GGTCATGAACTCAGGGAGCCAGGGGCTCGCCTCTCCCCGGGAAGGTaGGCGCAGCAGCAGGGAGCACTTGGCAGCACTCGAGCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: GHELREPGARLSPGR*AQQQGALGSTRAKK
Trigger: TTTCTTGGCTCGAGTGCTGCCAAGTGCTCCCTGCTGCTGCGCCCACCTTCCCGGGGAGAGGCGAGCCCCTGGCTCCCTGAGTTCATGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 90 bp GTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATaGCTGCACTTCCCACCTTCCTGCCTGGGGAGAGGCCCAATCCCC +
Preference number: 1 (lower is better)
Translates to: VSEATWWTSLRNPGS*LHFPPSCLGRGPIP
Trigger: GGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 90 bp TCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCC +
Preference number: 1 (lower is better)
Translates to: SQGDVSGLRRQPSPG*VYVCMQPRISITLA
Trigger: GGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR TCA 90 bp CACTTCCCTGACCCTCAGCCAAGCACAGACAGGACCCACACACAGTaGGGTGAACTCACAGGCCTCAGAAGCCTCCCTGAGCCCGGCCAC +
Preference number: 1 (lower is better)
Translates to: HFPDPQPSTDRTHTQ*GELTGLRSLPEPGH
Trigger: GTGGCCGGGCTCAGGGAGGCTTCTGAGGCCTGTGAGTTCACCTCACTGTGTGTGGGTCCTGTCTGTGCTTGGCTGAGGGTCAGGGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 90 bp CCCAGCTCCTCCACTTGCTTCTGCGGGGCCTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTCCCTCCTCTCTCAGGTGGATGCTGG +
Preference number: 1 (lower is better)
Translates to: PSSSTCFCGASAHRL*RMGRQLPPLSGGCW
Trigger: CCAGCATCCACCTGAGAGAGGAGGGAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 90 bp CTGGGCTCCGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTCCACA +
Preference number: 1 (lower is better)
Translates to: LGSGDSPVQGGSMSA*SRGFPSPWPWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCGGAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR GCA 90 bp GTGTCTGGGCTCCGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTC +
Preference number: 1 (lower is better)
Translates to: VSGLRRQPSPGWVYV*MQPRISITLAMGLF
Trigger: GAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCGGAGCCCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 90 bp CAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACACCTGCTCCTGGGATCCAGCAGTGC +
Preference number: 1 (lower is better)
Translates to: QGGSMSACSRGFPSP*PWGCSTPAPGIQQC
Trigger: GCACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 90 bp ACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCT +
Preference number: 1 (lower is better)
Translates to: TASQDRSEGVSEATW*TSLRNPGSCLHFPP
Trigger: AGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 90 bp TTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCA +
Preference number: 1 (lower is better)
Translates to: LTASQDRSEGVSEAT*WTSLRNPGSCLHFP
Trigger: TGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR GCA 90 bp CACCCACGGCTCCCATCACGCACACAATGCTCACACGCACAGGCGTaGACATGCTCACATGCAACACACGCACATTCACATGCACTTACG +
Preference number: 1 (lower is better)
Translates to: HPRLPSRTQCSHAQA*TCSHATHAHSHALT
Trigger: CGTAAGTGCATGTGAATGTGCGTGTGTTGCATGTGAGCATGTGCACGCCTGTGCGTGTGAGCATTGTGTGCGTGATGGGAGCCGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 90 bp CACTCACAATCAAGCCTTCACACGCACAACAGTCACACCCTCACATaGAGTCACACCCACATGCACACTCATGCACAATCACATCCTCCC +
Preference number: 1 (lower is better)
Translates to: HSQSSLHTHNSHTLT*SHTHMHTHAQSHPP
Trigger: GGGAGGATGTGATTGTGCATGAGTGTGCATGTGGGTGTGACTGCATGTGAGGGTGTGACTGTTGTGCGTGTGAAGGCTTGATTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCGACCTGGCTGCCAGCTaGAAACTCAGCTGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSDLAAS*KLSWSP
Trigger: TGGGGACCAGCTGAGTTTCCAGCTGGCAGCCAGGTC...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
3UTR-3UTR GCA 90 bp GCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCCCACACGCAGCCTCTaGCTGGATGGCAGAATTCAT +
Preference number: 2 (lower is better)
Translates to: AQLPLPRAMCLGSGDSPVPTRSL*LDGRIH
Trigger: ATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGGG...GACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp GGGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTCACCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 2 (lower is better)
Translates to: GIQQCSPQEQTQPGPSLRSPHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGA...CCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTCACAGGTGGGCACTaGGGCGCTCACCTCACTACA +
Preference number: 2 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGLTGGH*GAHLTT
Trigger: TGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAG...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR-3UTR TCA 90 bp GCCCAGATTACCACTTCCCTGACCCTCAGCCAAGCACAGACAGGACCCACACACGGCTGGAAGGTGCCGTaGGCTCCTCCCCACACGCAG +
Preference number: 2 (lower is better)
Translates to: AQITTSLTLSQAQTGPTHGWKVP*APPHTQ
Trigger: CTGCGTGTGGGGAGGAGCTCACGGCACCTTCCAGCC...GTGTGTGGGTCCTGTCTGTGCTTGGCTGAGGGTCAGGGAAGTGGTAATCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSSAHRL*RMGRQL
Trigger: GAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGA...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAACCAGTCAGGTCCTACTaGGACAGCCAAGGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPEPVRSY*DSQGAL
Trigger: CAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGG...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCCCCTCCTCTCTCAGGTaGATGCTGGGCGTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PPSAGDTDKELSGLERVPPSSLR*MLGVGA
Trigger: GGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGG...GGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR TCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCCTCCAGCTCTGATCTaGACAGGCCCACCCAGCGCC +
Preference number: 2 (lower is better)
Translates to: CPHMPAFQQIASLRVGATPPALI*TGPPSA
Trigger: GGCGCTGGGTGGGCCTGTTCAGATCAGAGCTGGAGG...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp GGCCACCATCGCCCTCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACACAAGTGGGATCCCCTaGCTCCTTCCTTGGACTCTG +
Preference number: 2 (lower is better)
Translates to: GHHRPPPSLLGGGGRSLYTSGIP*LLPWTL
Trigger: CAGAGTCCAAGGAAGGAGGCAGGGGATCCCACTTGT...GTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGAGGGCGATGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGGTATCAGCTTCCCCCTaGCTAGGGGACTCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQVSASP*LGDSSK
Trigger: CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATAC...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTCTCTCCCCGGGAAGGTaGGCGCAGCAGCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVLSPGR*AQQQGA
Trigger: TGCTCCCTGCTGCTGCGCCCACCTTCCCGGGGAGAG...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR TCA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCTGGACCCCCAGGATCTaGTGCCTGGTTTCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGWTPRI*CLVSFL
Trigger: CAGAAACGAAACCAGGCATCAGATCCTGGGGGTCCA...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp GCCCAGATTACCACTTCCCTGACCCTCAGCCAAGCACAGACAGGACCCACACACCCAGAGGCTGGAAGGTaGCGTGAGCTCCTCCCCACA +
Preference number: 2 (lower is better)
Translates to: AQITTSLTLSQAQTGPTHPEAGR*RELLPT
Trigger: TGTGGGGAGGAGCTCACGGCACCTTCCAGCCTCTGG...GTGTGTGGGTCCTGTCTGTGCTTGGCTGAGGGTCAGGGAAGTGGTAATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp TCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCCTCTCAGGTGGATGCTaGGCGTGGGAGCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: SAGDTDKELSGLERVPMSLSGGC*AWEPMG
Trigger: TCCCATGGGCTCCCACGCCCAGCATCCACCTGAGAG...GGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp TCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGTCTCCCCGACTGCTCCCACTaGCTGGTCCCATTGCTAACT +
Preference number: 2 (lower is better)
Translates to: SANSVPQSGGHHRPPPSLPDCSH*LVPLLT
Trigger: AGTTAGCAATGGGACCAGGCAGTGGGAGCAGTCGGG...GAGACTTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCTCACAGGTGGGCACTaGGGCGCTCACCTCACTACA +
Preference number: 2 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPLTGGH*GAHLTT
Trigger: TGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAG...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTCTGGGCCAGCTGGCATaGAGACAGCATCCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PHAASAWMAEFMQNSFRALGQLA*RQHPAR
Trigger: CCTGGCCGGATGCTGTCTCCATGCCAGCTGGCCCAG...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR-3UTR CCA 90 bp AGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCGGGCTAAGTGACATCTaGCCACCCCTGGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: RQPSPGWVYVCMQPRISIGLSDI*PPLGQL
Trigger: CAGCTGGCCCAGGGGTGGCCAGATGTCACTTAGCCC...GATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR CAA 90 bp ATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCC +
Preference number: 2 (lower is better)
Translates to: INSQPGQKRRRLRSN*VDQPQEPRVMPALP
Trigger: GGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR TCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCCTCCAGCTCTGATCTaGACAGGCCCACCCAGCGCC +
Preference number: 2 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRPPALI*TGPPSA
Trigger: GGCGCTGGGTGGGCCTGTTCAGATCAGAGCTGGAGG...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp CCTCCTTCCTTGGACTCTGTATCAGCTTCCCCCTGGCTAGGGGACTCCTCTAAGATCCACACAGGAGCCTaGCTCCTCCTCTGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PPSLDSVSASPWLGDSSKIHTGA*LLLWMG
Trigger: CCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGAT...CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATACAGAGTCCAAGGAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTACATCTGGCCACCCCTaGGCCAGCTGGCATGGAGAC +
Preference number: 2 (lower is better)
Translates to: PHAASAWMAEFMQNSFRATSGHP*ASWHGD
Trigger: GTCTCCATGCCAGCTGGCCCAGGGGTGGCCAGATGT...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR-3UTR CCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGCACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: PSPGWVYVCMQPRISITLHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR TCA 90 bp CCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCTGGACCCCCAGGATCTaGTGCCTGGTTTCGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PRGRGTQLIQGQGGKSEFWTPRI*CLVSFL
Trigger: CAGAAACGAAACCAGGCATCAGATCCTGGGGGTCCA...GAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTTCCTCCACTTGCTTCTaGGGGGCCTCAGCACACAGA +
Preference number: 2 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVSSTCF*GASAHR
Trigger: TCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGAGGA...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 2 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR GCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGCCAAGGGGCCCTGTaGGAGGCCTGGAGGTGCCCC +
Preference number: 2 (lower is better)
Translates to: QFSQSGIRTGISLTASQDSQGAL*EAWRCP
Trigger: GGGGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCT...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCCAGGATCTGATGCCTaGTTTCGTTTCTGGCACCAC +
Preference number: 2 (lower is better)
Translates to: CPHMPAFQQIASLRVGATPGSDA*FRFWHH
Trigger: GTGGTGCCAGAAACGAAACCAGGCATCAGATCCTGG...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 2 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR TCA 90 bp CTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCTAAGCCTCCAGCTCTaGTCTGAACAGGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: LPHLRLGHICRFQGANPILSLQL*SEQAHP
Trigger: TGGGTGGGCCTGTTCAGATCAGAGCTGGAGGCTTAG...AATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp CGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCCTATCCACACAGGAGCCTaGCTCCTCCTCTGGATGGGG +
Preference number: 2 (lower is better)
Translates to: RSLYKGRVANLNSQVGSPIHTGA*LLLWMG
Trigger: CCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGAT...AGGGGATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACGGACACACGCAGGGCTaGATGTGGCCAGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QFSQSGIRTGISLTASQDGHTQG*MWPGPR
Trigger: CCTGGGCCCTGGCCACATGCAGCCCTGCGTGTGTCC...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp TCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCAGTGACACCTTCACATaGAGTCACACCTGCACTGTC +
Preference number: 2 (lower is better)
Translates to: SAGDTDKELSGLERVPMSSDTFT*SHTCTV
Trigger: GACAGTGCAGGTGTGACTGCATGTGAAGGTGTCACT...GGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp TGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCCCTGTCACCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 2 (lower is better)
Translates to: WQNSCRIRSGLSDIWPPLSPHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGA...CAGGGGTGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR-3UTR CCA 90 bp AGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGCATCCGGCCAGGGTTaGGGGAGACAAGCTGGACGC +
Preference number: 2 (lower is better)
Translates to: SQSGIRTGISLTASQDRSASGQG*GRQAGR
Trigger: GCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGC...GCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCCGACTGCTCCCACTaGCTGGTCCCATTGCTAACT +
Preference number: 2 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIPDCSH*LVPLLT
Trigger: AGTTAGCAATGGGACCAGGCAGTGGGAGCAGTCGGG...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGACACGCACATTCACATaGACTTACGCACATGCTGCA +
Preference number: 2 (lower is better)
Translates to: PSPGWVYVCMQPRISITLTRTFT*TYAHAA
Trigger: TGCAGCATGTGCGTAAGTGCATGTGAATGTGCGTGT...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGTATCAGCTTCCCCCTaGCTAGGGGACTCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: ATDVSPHACISANSVPQSVSASP*LGDSSK
Trigger: CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATAC...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp TCTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATCCCTGCCTCCTTCCTTaGACTCTGTATCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SASSPSGAHLQISRGKPNPCLLP*TLYQLP
Trigger: GGGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGG...ATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR TCA 90 bp CTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTGCAGGGTGGCAAATCTaGATTCACAAGTGGGATCCC +
Preference number: 2 (lower is better)
Translates to: LPHLRLGHICRFQGANPIAGWQI*IHKWDP
Trigger: GGGATCCCACTTGTGAATTCAGATTTGCCACCCTGC...AATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR TCA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCAGGGTGGCAAATCTaGATTCACAAGTGGGATCCC +
Preference number: 2 (lower is better)
Translates to: LISVWGTSADFKGQTQFQAGWQI*IHKWDP
Trigger: GGGATCCCACTTGTGAATTCAGATTTGCCACCCTGC...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTCCAGGATCTGATGCCTaGTTTCGTTTCTGGCACCAC +
Preference number: 2 (lower is better)
Translates to: ATDVSPHACISANSVPQSPGSDA*FRFWHH
Trigger: GTGGTGCCAGAAACGAAACCAGGCATCAGATCCTGG...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR GCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCAGACCCCAGGGCCTTaGCACTTCCTGATTCTAACT +
Preference number: 2 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIQTPGP*HFLILT
Trigger: AGTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTG...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCACCCCTGGGCCAGCTaGCATGGAGACAGCATCCGG +
Preference number: 2 (lower is better)
Translates to: YFQFSQSGIRTGISLTASHPWAS*HGDSIR
Trigger: CCGGATGCTGTCTCCATGCCAGCTGGCCCAGGGGTG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAACACGCAGCCTCTGCCTaGATGGCAGAATTCATGCAG +
Preference number: 2 (lower is better)
Translates to: QSGIRTGISLTASQDRSEHAASA*MAEFMQ
Trigger: CTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTG...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAACAGCCTCTGCCTGGATaGCAGAATTCATGCAGAATT +
Preference number: 2 (lower is better)
Translates to: QSGIRTGISLTASQDRSEQPLPG*QNSCRI
Trigger: AATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTG...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR GCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 2 (lower is better)
Translates to: LRIFTFSLARVELEQGYHPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR CCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATCAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 2 (lower is better)
Translates to: LRIFTFSLARVELEQGYHQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 72 bp CAGGCCCACCCATGTCCAGCACCCTTGGAGGGCTCCTaGCCAGGAGAAGCGTCCTCAGGCCAGCCACGGCCA +
Preference number: 3 (lower is better)
Translates to: QAHPCPAPLEGS*PGEASSGQPRP
Trigger: TGGCCGTGGCTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGGGTGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR CCA 72 bp CCCACCCAGTCCACTGCCAGGCTCACAGGTGGGCACTaGGGCGCTCACCTCACTACACGTGGCGTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: PTQSTARLTGGH*GAHLTTRGVEG
Trigger: CCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGGACTGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR CCA 72 bp CACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTaGCGTCGAGGGGACACACGCAGGGCTGCATGTGGC +
Preference number: 3 (lower is better)
Translates to: HRWALGRSPHYT*RRGDTRRAACG
Trigger: GCCACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR CCA 72 bp TGCAGGCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAGTCCAGGGTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: CRPSCPFPGRCV*APETAQSRVGL
Trigger: TAGACCCACCCTGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR GCA 72 bp AGAATGGGAAGGCAGCTCCCTCCTCTCTCAGGTGGATaGTGGGCGTGGGAGCCCATGGGAGGGGCAGAGGGG +
Preference number: 3 (lower is better)
Translates to: RMGRQLPPLSGG*WAWEPMGGAEG
Trigger: CCCCTCTGCCCCTCCCATGGGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGGAGCTGCCTTCCCATTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 72 bp CCGGAATTGGACCTGAAGCCAGCGGGCCCTGATCAGTaGTGGCAGGAGCCAGGTGTCTGGTCTCAGCCACCC +
Preference number: 3 (lower is better)
Translates to: PELDLKPAGPDQ*WQEPGVWSQPP
Trigger: GGGTGGCTGAGACCAGACACCTGGCTCCTGCCAGCACTGATCAGGGCCCGCTGGCTTCAGGTCCAATTCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR CCA 72 bp GTTGGGGGAGACAAGCTGGACGCCCTCCACATAGGCTaGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCC +
Preference number: 3 (lower is better)
Translates to: VGGDKLDALHIG*PVRSYWDSQGA
Trigger: GGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATGTGGAGGGCGTCCAGCTTGTCTCCCCCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR-3UTR CAA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGTCCCAGCTCCTCCACTaGCTTCTGCGGGGCCTCAGC +
Preference number: 3 (lower is better)
Translates to: PSPGWVYVCMQPRISITLSQLLH*LLRGLS
Trigger: GCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGGA...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR GCA 72 bp CGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTaGATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RPSRATDVSPHA*ISANSVPQSGG
Trigger: GCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR GCA 72 bp GGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCACCCTGGCCATGGGGC +
Preference number: 3 (lower is better)
Translates to: GDSPVQGGSMSA*SRGFPSPWPWG
Trigger: GCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR GCA 72 bp GGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTaGCAGCTGGAAACTCAGCTGGTCCCCAAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: GFCPNPFPRGPG*QLETQLVPKAR
Trigger: TCTGGCCTTGGGGACCAGCTGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
3UTR GCA 72 bp CTCCGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCCATCACCCTGGCCATG +
Preference number: 3 (lower is better)
Translates to: LRRQPSPGWVYV*MQPRISITLAM
Trigger: CATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 72 bp CTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCAGTGGGTCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LLLGTQTRSSPD*KESPCPVGQGW
Trigger: CCAGCCCTGACCCACTGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
3UTR CCA 72 bp TCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATaGGGCTGTTCCACACCTGCTCCTGGGATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: SACSRGFPSPWP*GCSTPAPGIQQ
Trigger: CTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 72 bp CAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCCGGGTCATGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: QDRSEGVSEATW*TSLRNPGSCLH
Trigger: GTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR CCA 72 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTG +
Preference number: 3 (lower is better)
Translates to: SQDRSEGVSEAT*WTSLRNPGSCL
Trigger: CAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
3UTR-3UTR CAA 90 bp TCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCAAGGCCAGAGCCCCCTaGAGCTTCCAGAGCCTCGAT +
Preference number: 3 (lower is better)
Translates to: SAGDTDKELSGLERVPMSKARAP*SFQSLD
Trigger: ATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT...GGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
3UTR GCA 72 bp TCCACTTGCTTCTGCGGGGCCTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTCCCTCCTCTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: STCFCGASAHRL*RMGRQLPPLSG
Trigger: ACCTGAGAGAGGAGGGAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CAA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCCAGACCCCAGGGCCTaGCCACTTCCTGATTCTAAC +
Preference number: 3 (lower is better)
Translates to: CPHMPAFQQIASLRVGATPDPRA*PLPDSN
Trigger: GTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTGG...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CAA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCCCTGCCTCCTTCCTaGGACTCTGTATCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: HACISANSVPQSGGHHRPPLPPS*DSVSAS
Trigger: GGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGGG...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR CCA 72 bp CTGCCTCCTTCCTTGGACTCTGTATCAGCTTCCCCCTaGCTAGGGGACTCCTCTAAGCCTCCAGCTCTGATC +
Preference number: 3 (lower is better)
Translates to: LPPSLDSVSASP*LGDSSKPPALI
Trigger: GATCAGAGCTGGAGGCTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATACAGAGTCCAAGGAAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR CCA 72 bp CCCGAAATCCCCAACCAGATGATGCCCCCGATTCTGTaGAGCCCAGATTACCACTTCCCTGACCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: PEIPNQMMPPIL*SPDYHFPDPQP
Trigger: TGGCTGAGGGTCAGGGAAGTGGTAATCTGGGCTCCACAGAATCGGGGGCATCATCTGGTTGGGGATTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR TCA 72 bp GGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTaGATTCACAAGTGGGATCCCCTGCCTCCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: GDAAYTRAGWQI*IHKWDPLPPSL
Trigger: CAAGGAAGGAGGCAGGGGATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR TCA 72 bp ATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTaGCATCTGGCCACCCCTGGGCCAGCTGGCATGGAG +
Preference number: 3 (lower is better)
Translates to: MAEFMQNSFRAK*HLATPGPAGME
Trigger: CTCCATGCCAGCTGGCCCAGGGGTGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
3UTR GCA 72 bp CAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCCTaGCTCCTTCCTTGGACTCTGTATCAGCTTCCCCCT +
Preference number: 3 (lower is better)
Translates to: QGGKSEFTSGIP*LLPWTLYQLPP
Trigger: AGGGGGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGGGATCCCACTTGTGAATTCAGATTTGCCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CAA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCCCAGACCCCAGGGCCTaGCCACTTCCTGATTCTAAC +
Preference number: 3 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGPDPRA*PLPDSN
Trigger: GTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTGG...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CAA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCCAAAGTCCAAAGCCCTaGTCCCTACACTGGACCCCC +
Preference number: 3 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGQSPKP*SLHWTP
Trigger: GGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTG...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CAA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCCCCCTGCCTCCTTCCTaGGACTCTGTATCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGPLPPS*DSVSAS
Trigger: GGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGGG...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR-3UTR CAA 90 bp CTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCACTGCCTGGTCCCATaGCTAACTACCTTATCCACA +
Preference number: 3 (lower is better)
Translates to: LPHLRLGHICRFQGANPIHCLVP*LTTLST
Trigger: TGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTG...AATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR GCA 72 bp ATGCAACACACGCACATTCACATGCACTTACGCACATaGTGCACACACTGCAGACACACCTGCCTAGACACT +
Preference number: 3 (lower is better)
Translates to: MQHTHIHMHLRT*CTHCRHTCLDT
Trigger: AGTGTCTAGGCAGGTGTGTCTGCAGTGTGTGCAGCATGTGCGTAAGTGCATGTGAATGTGCGTGTGTTGCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
3UTR-3UTR CAA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCCACTGCCTGGTCCCATaGCTAACTACCTTATCCACA +
Preference number: 3 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGHCLVP*LTTLST
Trigger: TGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTG...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
3UTR TCA 72 bp GAACCAGGCCTGAGCTACATTAAGCTGATTCTCATTTaGGCGTATTTGCCATCAGACTGCACTCACACCTTA +
Preference number: 3 (lower is better)
Translates to: EPGLSYIKLILI*AYLPSDCTHTL
Trigger: TAAGGTGTGAGTGCAGTCTGATGGCAAATACGCTCAAATGAGAATCAGCTTAATGTAGCTCAGGCCTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHGGPHS*TVKRSR
Trigger: GCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCC...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCAAGCGCGGGAAGCGCCTaGGGTCAGCACCGCGGACAG +
Preference number: 4 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAASAGSA*GQHRGQ
Trigger: CTGTCCGCGGTGCTGACCGCAGGCGCTTCCCGCGCT...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630378.2
CDS-3UTR GCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACIGGPHS*TVKRSR
Trigger: GCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCC...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGAGCCAAGGGGCCCTGTaGGAGGCCTGGAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LASQVLLGQPRGPVRGLESQGAL*EAWRCP
Trigger: GGGGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCT...CTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCACCGCGGACAGCTCCTaGTGCGCGCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGTADSS*CARARS
Trigger: GCTCCTGGCCCGCGCGCACCAGGAGCTGTCCGCGGT...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630378.2
CDS-3UTR CCA 90 bp GGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGAGGGCGTGGGAGCCCATaGGAGGGGCAGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSQVGTGALTSLHVASRGGRGSP*EGQRGC
Trigger: ACAGCCCCTCTGCCCCTCCCATGGGCTCCCACGCCC...TCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp ACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCCCCACTCCTGCACCGTaGAGCGCTCGCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TGALTSLHVASRGHTQGCPTPAP*SARAPA
Trigger: TGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGG...GCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CAGGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCACCCACTCCTGCACCGTaGAGCGCTCGCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QGSPSGPHGPLMCPHMPAPTPAP*SARAPA
Trigger: TGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGG...TGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGGAAGGCCAGCGTGGTaGTGGCCAGCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACGRPAW*WPARPA
Trigger: GGCTGGCCTGGCTGGCCATCACCACGCTGGCCTTCC...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCAGGCTGGAAGGTGCCGTaGGCTCCTCCCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPGWKVP*APPHTQ
Trigger: CTGCGTGTGGGGAGGAGCTCACGGCACCTTCCAGCC...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp CCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGCCTCAGAAGCCTCCCTaGGCCCGGCCACAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLPGSQVGTGALTSLHVAPQKPP*ARPQGL
Trigger: GAGACCCTGTGGCCGGGCTCAGGGAGGCTTCTGAGG...CGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGAGCGCGGGAAGCGCCTaGGGTCAGCACCGCGGACAG +
Preference number: 4 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQSAGSA*GQHRGQ
Trigger: CTGTCCGCGGTGCTGACCGCAGGCGCTTCCCGCGCT...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGGCAGGGTCCACAGCCAAGCAGCCCCCTACGCCGGGGTCCCAGGTTCACATCCAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GQGPQPSSPLRRGPRFTSKRSRS*TVRLAL
Trigger: GAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTT...GGATGTGAACCTGGGACCCCGGCGTAGGGGGCTGCTTGGCTGTGGACCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp TCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGGGCCGCCAGCCCCTaGCCAGCACACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSSAAPKNRPNRGQASGSRAASP*PAHCRP
Trigger: GGGCCTGCAGTGTGCTGGGCAGGGGCTGGCGGCCCT...GGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCATTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPLEGGA*GRPGQQ
Trigger: CTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAA...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CCA 90 bp TGCAGGCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCGCATCCGGCCAGGGTTaGGGGAGACAAGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: CRPSCPFPGRCVWAPETAASGQG*GRQAGR
Trigger: GCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGC...GGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp GGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGCACCCCTGGGCCAGCTaGCATGGAGACAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: GWPVRSYWDSQGALCEAWHPWAS*HGDSIR
Trigger: CCGGATGCTGTCTCCATGCCAGCTGGCCCAGGGGTG...CCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp GGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGAGGGAGGGGGCCAACCTaGGGCCAGAGGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSQVGTGALTSLHVASRGGRGPT*GQRLEG
Trigger: ACCTTCCAGCCTCTGGCCCCAGGTTGGCCCCCTCCC...TCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATCCCCCGGGCGTGGGAGCCCATaGGAGGGGCAGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAGPQGQSPLELPEPRSPGRGSP*EGQRGC
Trigger: ACAGCCCCTCTGCCCCTCCCATGGGCTCCCACGCCC...GGGGGATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGGGTGGATGCTGGGCGTaGGAGCCCATGGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPGSQVGTGALTSLHVAGGCWA*EPMGGA
Trigger: TGCCCCTCCCATGGGCTCCCACGCCCAGCATCCACC...CGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCCCAGGACCCTCCATGTaGACCCAGGCACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSPGPSM*TQARGL
Trigger: GAGGCCACGTGCCTGGGTCCACATGGAGGGTCCTGG...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TGCAGGCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCCAGGACCCTCCATGTaGACCCAGGCACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CRPSCPFPGRCVWAPETAPGPSM*TQARGL
Trigger: GAGGCCACGTGCCTGGGTCCACATGGAGGGTCCTGG...GGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCGGCCCTAGATGGCTGTaGCCTGGATCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AQLPLPRAMCLGSGDSPVGPRWL*PGSGLG
Trigger: GCCCAGCCCTGATCCAGGCCACAGCCATCTAGGGCC...GACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CCGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCAGCCACATGCCCTCGGTaGAGAGCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PPHTHSLSAPSSSGSRHPATCPR*RAGSGR
Trigger: GCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGC...TGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGGAAGCCAGCGGGCCCTaGTCAGTGCTGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQEASGP*SVLAGA
Trigger: GGCTCCTGCCAGCACTGATCAGGGCCCGCTGGCTTC...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCGGCTGGAAGGTGCCGTaGGCTCCTCCCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGGWKVP*APPHTQ
Trigger: CTGCGTGTGGGGAGGAGCTCACGGCACCTTCCAGCC...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACAGAGGCCCAATCCCCTaGGGGACCCTGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHRGPIP*GTLESP
Trigger: TGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCT...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCAAGAGGCCCAATCCCCTaGGGGACCCTGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPRGPIP*GTLESP
Trigger: TGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCT...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCTGGACCGGGAGCTTCTaGAGCGCCAGCCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGWTGSF*SASPPR
Trigger: CCGCGGAGGGCTGGCGCTGCAGAAGCTCCCGGTCCA...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCAAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAAKRSRS*TVRLAL
Trigger: GAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTT...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CCGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: PPHTHSLSAPSSSGSRHPRPRKS*PFSDSG
Trigger: CCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCG...TGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCCCAGTCAGGTCCTACTaGGACAGCCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSPVRSY*DSQGAL
Trigger: CAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGG...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGGCATCCGGCCAGGGTTaGGGGAGACAAGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LASQVLLGQPRGPVRGLEASGQG*GRQAGR
Trigger: GCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGC...CTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp ACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCCTGGGCCAGCTGGCATaGAGACAGCATCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGALTSLHVASRGHTQGCLGQLA*RQHPAR
Trigger: CCTGGCCGGATGCTGTCTCCATGCCAGCTGGCCCAG...GCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGCCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LASQVLLGQPRGPVRGLEPGRCV*APETAQ
Trigger: CTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGG...CTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp CCGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACGCGCTCCTGCACCGTaGGGTTGGCGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PPHTHSLSAPSSSGSRHPRAPAP*GWRSAT
Trigger: TGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCG...TGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACCCCACTCCTGCACCGTaGAGCGCTCGCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RPTPIVSLHHPHQGAGTHPTPAP*SARAPA
Trigger: TGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGG...GTGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCACGGTGCCCTTCTCGGTaGTGGTGTCGCACCACATGG +
Preference number: 4 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAARCPSR*WCRTTW
Trigger: CCATGTGGTGCGACACCATCACCGAGAAGGGCACCG...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACAGGCCAGAGCCCCCTTaGGCTTCCAGAGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHRPEPP*ASRASI
Trigger: GATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCT...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACIKRSRS*TVRLAL
Trigger: GAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTT...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTGGACACACGCAGGGCTaGATGTGGCCAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSSAAPKNRPNRGQASGGHTQG*MWPGPR
Trigger: CCTGGGCCCTGGCCACATGCAGCCCTGCGTGTGTCC...ACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp ACAGCATCCGGCCAGGGTTGGGGGAGACAAGCTGGACGCCCTCCACATAGGCTGGGACACACGCAGGGCTaGATGTGGCCAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TASGQGWGRQAGRPPHRLGHTQG*MWPGPR
Trigger: CCTGGGCCCTGGCCACATGCAGCCCTGCGTGTGTCC...CAGCCTATGTGGAGGGCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCAGCCAAGGGGCCCTGTaGGAGGCCTGGAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSSQGAL*EAWRCP
Trigger: GGGGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCT...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCACCCAGCTCCTCCACTTaGTTCTGCGGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPPSSST*FCGASA
Trigger: TGCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGG...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTGCCCCCCGATGGGCACCTaGCAGCCTCACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SLGGLGFCPNPFPRGPGCPPMGT*QPHSRD
Trigger: GTCCCGGGAGTGAGGCTGGCAGGTGCCCATCGGGGG...GCAGCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCCATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTAGGGCCGCCAGCCCCTaGCCAGCACACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PISLGGLGFCPNPFPRGPRAASP*PAHCRP
Trigger: GGGCCTGCAGTGTGCTGGGCAGGGGCTGGCGGCCCT...AGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCCACTTCCCACCTTCCTaGCTGGGGAGAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSHFPPS*LGRGPI
Trigger: GATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTG...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCATTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPHTHSLSAPSSSGSRHPLEGGA*GRPGQQ
Trigger: CTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAA...TGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCACCAGTCAGGTCCTACTaGGACAGCCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAAPVRSY*DSQGAL
Trigger: CAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGG...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp GGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGAGGGCTAAGTGACATCTaGCCACCCCTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSQVGTGALTSLHVASRGGLSDI*PPLGQL
Trigger: CAGCTGGCCCAGGGGTGGCCAGATGTCACTTAGCCC...TCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp TGCAGGCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCGAGTCCTCTGGAGGTaGACCCTGGGCTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CRPSCPFPGRCVWAPETARVLWR*TLGFPE
Trigger: CTCAGGAAAGCCCAGGGTCCACCTCCAGAGGACTCG...GGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATCCCCCGGCCCTAGATGGCTGTaGCCTGGATCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAGPQGQSPLELPEPRSPGPRWL*PGSGLG
Trigger: GCCCAGCCCTGATCCAGGCCACAGCCATCTAGGGCC...GGGGGATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGCCATCACCCTGGCCATaGGGCTGTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: GWPVRSYWDSQGALCEAWPSPWP*GCSTPA
Trigger: AGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGG...CCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACTCCCACCTTCCTGCCTaGGGAGAGGCCCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHSHLPA*GEAQSP
Trigger: AGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGA...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CAGGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCACAGTCCAGGCTGAAGTaGTTCCTTTGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QGSPSGPHGPLMCPHMPAQSRLK*FLCGGP
Trigger: GGGACCCCCGCAAAGGAATCACTTCAGCCTGGACTG...TGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGGTGCCTGTCGCACCACATGGTaGAGCCCACGCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: QSGPTGTAKGPCARPGGACRTTW*SPRSRW
Trigger: CCATCGTGAGCGTGGGCTTCACCATGTGGTGCGACA...GGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp GCCCAGATTACCACTTCCCTGACCCTCAGCCAAGCACAGACAGGACCCACACACAGCGTGCGCCAGGCGTaGGCGGCGGCCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AQITTSLTLSQAQTGPTHSVRQA*AAASSR
Trigger: TCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCT...GTGTGTGGGTCCTGTCTGTGCTTGGCTGAGGGTCAGGGAAGTGGTAATCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTACCCACCCAGTCCACTaGCAGGCTCACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACTHPVH*QAHRWA
Trigger: TGCCCACCTGTGAGCCTGGCAGTGGACTGGGTGGGT...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCCCCCCGATGGGCACCTaGCAGCCTCACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISPPMGT*QPHSRD
Trigger: GTCCCGGGAGTGAGGCTGGCAGGTGCCCATCGGGGG...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACCCTCGAGGACCTGGCTaGCAGCTGGAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHPRGPG*QLETQL
Trigger: CAGCTGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGG...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GCCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: AQLPLPRAMCLGSGDSPVSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...GACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCAGGGCTGTTCCACACCTaGTCCTGGGATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPGLFHT*SWDPAV
Trigger: CACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCC...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp GGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCAAGGGCCGCCAGCCCCTaGCCAGCACACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GDSPVQGGSMSACSRGFPRAASP*PAHCRP
Trigger: GGGCCTGCAGTGTGCTGGGCAGGGGCTGGCGGCCCT...TGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTACCGCGGACAGCTCCTaGTGCGCGCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPTADSS*CARARS
Trigger: GCTCCTGGCCCGCGCGCACCAGGAGCTGTCCGCGGT...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACACCGCGGACAGCTCCTaGTGCGCGCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSPHACISANSVPQSGGHTADSS*CARARS
Trigger: GCTCCTGGCCCGCGCGCACCAGGAGCTGTCCGCGGT...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCTTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSLEGGA*GRPGQQ
Trigger: CTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAA...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CCA 90 bp CTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGGCGCTCTTCTCCTCTTaGAAGGAGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LASQVLLGQPRGPVRGLEALFSS*KEVRGD
Trigger: GTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGC...CTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACCTCACAGGTGGGCACTaGGGCGCTCACCTCACTACA +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHLTGGH*GAHLTT
Trigger: TGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAG...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp ACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCCTCACAGGTGGGCACTaGGGCGCTCACCTCACTACA +
Preference number: 4 (lower is better)
Translates to: TGALTSLHVASRGHTQGCLTGGH*GAHLTT
Trigger: TGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAG...GCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTACATCTGGCCACCCCTaGGCCAGCTGGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACTSGHP*ASWHGD
Trigger: GTCTCCATGCCAGCTGGCCCAGGGGTGGCCAGATGT...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCGGGCTAAGTGACATCTaGCCACCCCTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGGLSDI*PPLGQL
Trigger: CAGCTGGCCCAGGGGTGGCCAGATGTCACTTAGCCC...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp AGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTGCGGTGGATGCTGGGCGTaGGAGCCCATGGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLGGLGFCPNPFPRGPGCGGCWA*EPMGGA
Trigger: TGCCCCTCCCATGGGCTCCCACGCCCAGCATCCACC...GCAGCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCCCCTCCTCTCTCAGGTaGATGCTGGGCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSSAAPKNRPNRGQASGSPSSLR*MLGVGA
Trigger: GGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGG...GGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGCGAGTCCTCTGGAGGTaGACCCTGGGCTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLPGSQVGTGALTSLHVARVLWR*TLGFPE
Trigger: CTCAGGAAAGCCCAGGGTCCACCTCCAGAGGACTCG...CGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCCCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSAAPKNRPNRGQASGSPGRCV*APETAQ
Trigger: CTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGG...GGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTTCCCCTGAGGGACCCTaGAGAGCCCACGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: DPAVQPPRTDPTGAKPQVSPEGP*RAHDQG
Trigger: GCCCTGGTCGTGGGCTCTCCAGGGTCCCTCAGGGGA...AACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTCGAAAAGGAAATTGTTaGGCGCCATGGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACIRKGNC*APWPAR
Trigger: CCGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCG...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTGCCACATGCCCTCGGTaGAGAGCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPATCPR*RAGSGR
Trigger: GCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGC...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGGCCACATGCCCTCGGTaGAGAGCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRATCPR*RAGSGR
Trigger: GCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGC...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCGCCACATGCCCTCGGTaGAGAGCAGGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: CPHMPAFQQIASLRVGATATCPR*RAGSGR
Trigger: GCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGC...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCGCGCTCCTGCACCGTaGGGTTGGCGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PHLLLGTQTRSSPDWKESRAPAP*GWRSAT
Trigger: TGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCG...GGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp TCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGTCTCCCCACTCCTGCACCGTaGAGCGCTCGCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SANSVPQSGGHHRPPPSLPTPAP*SARAPA
Trigger: TGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGG...GAGACTTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGCCACCATCGCCCTCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAGACCACGAAGGCGCTaGCCAGGAGGTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GHHRPPPSLLGGGGRSLYRPRRR*PGGSGR
Trigger: CCTTCCTGAACCTCCTGGTCAGCGCCTTCGTGGTCT...GTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGAGGGCGATGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTTGTCGCACCACATGGTaGAGCCCACGCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACCRTTW*SPRSRW
Trigger: CCATCGTGAGCGTGGGCTTCACCATGTGGTGCGACA...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp GATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCGATCCCCCTGGACTTaGCACCCCCGATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: DPAVQPPRTDPTGAKPQVRSPWT*HPRWAP
Trigger: AGGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCG...AACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTAGCGCGGGAAGCGCCTaGGGTCAGCACCGCGGACAG +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPSAGSA*GQHRGQ
Trigger: CTGTCCGCGGTGCTGACCGCAGGCGCTTCCCGCGCT...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GCCAGCACCAAAGTCCAAAGCCCTTGTCCCTACACTGGACCCCCAGGATCTGATAGCGTGCGCCAGGCGTaGGCGGCGGCCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASTKVQSPCPYTGPPGSDSVRQA*AAASSR
Trigger: TCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCT...ATCAGATCCTGGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTGGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGGTGCCAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QSGPTGTAKGPCARPGGASPRVP*RGRRAC
Trigger: GCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCT...GGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp CAGGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCACCCGACTGCTCCCACTaGCTGGTCCCATTGCTAACT +
Preference number: 4 (lower is better)
Translates to: QGSPSGPHGPLMCPHMPAPDCSH*LVPLLT
Trigger: AGTTAGCAATGGGACCAGGCAGTGGGAGCAGTCGGG...TGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAACCTCTTGGAAGGAGGTaGGTGGGGACGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: EPPHLLLGTQTRSSPDWKPLGRR*VGTAGP
Trigger: TGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGG...TTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCGGACACACGCAGGGCTaGATGTGGCCAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISGHTQG*MWPGPR
Trigger: CCTGGGCCCTGGCCACATGCAGCCCTGCGTGTGTCC...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp CCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCACCAGAGGCTGGAAGGTaGCGTGAGCTCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: PAVQPPRTDPTGAKPQVPPEAGR*RELLPT
Trigger: TGTGGGGAGGAGCTCACGGCACCTTCCAGCCTCTGG...TGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp ACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCTCCTCCACTTGCTTCTaGGGGGCCTCAGCACACAGA +
Preference number: 4 (lower is better)
Translates to: TGALTSLHVASRGHTQGCSSTCF*GASAHR
Trigger: TCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGAGGA...GCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: CPHMPAFQQIASLRVGATRPRKS*PFSDSG
Trigger: CCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCG...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: SEATWWTSLRNPGSCLHFRPRKS*PFSDSG
Trigger: CCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCG...GAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGCGCTCTTCTCCTCTTaGAAGGAGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACALFSS*KEVRGD
Trigger: GTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGC...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp GTCCTCTGGAGGTGGACCCTGGGCTTTCCTGAGGGGCAGGGTCCACAGCCAAGCTCACCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: VLWRWTLGFPEGQGPQPSSPHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGA...GCTTGGCTGTGGACCCTGCCCCTCAGGAAAGCCCAGGGTCCACCTCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGGCTCACCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: RSPHYTWRRGDTRRAACGSPHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGA...GCCACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp ACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACGGCAGCAGGGAGCACTTaGCAGCACTCGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TFLPGERPNPLRDPGEPTAAGST*QHSSQE
Trigger: TTCTTGGCTCGAGTGCTGCCAAGTGCTCCCTGCTGC...CGTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGAAACTCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATGGCCTCCAGGAGGCTaGTGCCCAGCCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GNSAGPQGQSPLELPEPRWPPGG*CPATQR
Trigger: TCTCTGGGTGGCTGGGCACCAGCCTCCTGGAGGCCA...TCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGAGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCGTGGACCCAGGCACGTaGCCTCCAGGAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PTFCWGHRQGALRTGKSPVDPGT*PPGGWC
Trigger: GCACCAGCCTCCTGGAGGCCACGTGCCTGGGTCCAC...GGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAACCAGGACCCTCCATGTaGACCCAGGCACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GATPPSAGDTDKELSGLEPGPSM*TQARGL
Trigger: GAGGCCACGTGCCTGGGTCCACATGGAGGGTCCTGG...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGGACCTGGCTGCCAGCTaGAAACTCAGCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GIQQCSPQEQTQPGPSLRDLAAS*KLSWSP
Trigger: TGGGGACCAGCTGAGTTTCCAGCTGGCAGCCAGGTC...CCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCACAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACCAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCATCCCACCTTCCTGCCTaGGGAGAGGCCCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: PAVQPPRTDPTGAKPQVPSHLPA*GEAQSP
Trigger: AGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGA...TGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTAGGGCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: GSSSAAPKNRPNRGQASGRAHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGCCCT...ACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556320.1
ENST00000625459.1
CDS-3UTR TCA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCCGAAAAGGAAATTGTTaGGCGCCATGGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGRKGNC*APWPAR
Trigger: CCGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCG...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGGTGCCCCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QSGPTGTAKGPCARPGGAPPPRS*TGRPRS
Trigger: ACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGG...GGCACCTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCCGCGCTCCTGCACCGTaGGGTTGGCGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PRGRGTQLIQGQGGKSEFRAPAP*GWRSAT
Trigger: TGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCG...GAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CAGTCCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTTCGTTCAGGGCTAAGTaGCATCTGGCCACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSTARLTGGHWGAHLTTRSFRAK*HLATPG
Trigger: CCCAGGGGTGGCCAGATGTCACTTAGCCCTGAACGA...ACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCCATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTCGATCCCCCTGGACTTaGCACCCCCGATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PISLGGLGFCPNPFPRGPRSPWT*HPRWAP
Trigger: AGGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCG...AGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRAGGPHS*TVKRSR
Trigger: GCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCC...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAGCGTGCGCCAGGCGTaGGCGGCGGCCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRASVRQA*AAASSR
Trigger: TCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCT...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp CTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCACCTCTTGGAAGGAGGTaGGTGGGGACGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLGTQTRSSPDWKESPCPPLGRR*VGTAGP
Trigger: TGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGG...TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAACCCACCCAGTCCACTaGCAGGCTCACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GATPPSAGDTDKELSGLETHPVH*QAHRWA
Trigger: TGCCCACCTGTGAGCCTGGCAGTGGACTGGGTGGGT...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGGCGCCCACACGCAGCCTCTaGCTGGATGGCAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: PLPGSQVGTGALTSLHVAPTRSL*LDGRIH
Trigger: ATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGGG...CGCCACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAACCTCTCTCAGGTGGATaGTGGGCGTGGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPEPLSGG*WAWEPM
Trigger: CATGGGCTCCCACGCCCAGCATCCACCTGAGAGAGG...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAACCTCTCTCAGGTGGATaGTGGGCGTGGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: GATPPSAGDTDKELSGLEPLSGG*WAWEPM
Trigger: CATGGGCTCCCACGCCCAGCATCCACCTGAGAGAGG...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCCCCAGCTCCTCCACTTaGTTCTGCGGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSPSSST*FCGASA
Trigger: TGCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGG...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: GIQQCSPQEQTQPGPSLRSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...CCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp GGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 4 (lower is better)
Translates to: GSSSAAPKNRPNRGQASGPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...ACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGTTACACTGCCTGACATaGGCAGGACCCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQLHCLT*AGPWSC
Trigger: GCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAA...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTAGCTCTTCACAGCTGTaGGGTACGGTGCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GRSPHYTWRRGDTRRAACSSSQL*GTVPFS
Trigger: CGAGAAGGGCACCGTACCCCACAGCTGTGAAGAGCT...ACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CAGTCCACTGCCAGGCTCACAGGTGGGCACTGGGGCGCTCACCTCACTACACGTGCCCTCCACATAGGCTaGCCAGTCAGGTCCTACTGG +
Preference number: 4 (lower is better)
Translates to: QSTARLTGGHWGAHLTTRALHIG*PVRSYW
Trigger: CCAGTAGGACCTGACTGGCCAGCCTATGTGGAGGGC...ACGTGTAGTGAGGTGAGCGCCCCAGTGCCCACCTGTGAGCCTGGCAGTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCGGGCGTGGGAGCCCATaGGAGGGGCAGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTGRGSP*EGQRGC
Trigger: ACAGCCCCTCTGCCCCTCCCATGGGCTCCCACGCCC...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAATCTGGAGGTGGACCCTaGGCTTTCCTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPESGGGP*AFLRGR
Trigger: CCTGCCCCTCAGGAAAGCCCAGGGTCCACCTCCAGA...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGCTCTCCCCGGGAAGGTaGGCGCAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PSPGWVYVCMQPRISITLLSPGR*AQQQGA
Trigger: TGCTCCCTGCTGCTGCGCCCACCTTCCCGGGGAGAG...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCACTCTCCCCGGGAAGGTaGGCGCAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASLSPGR*AQQQGA
Trigger: TGCTCCCTGCTGCTGCGCCCACCTTCCCGGGGAGAG...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAGTGGACCCAGGCACGTaGCCTCCAGGAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGVDPGT*PPGGWC
Trigger: GCACCAGCCTCCTGGAGGCCACGTGCCTGGGTCCAC...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGCACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GIQQCSPQEQTQPGPSLRHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...CCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTCTTCAGGGCCCTAGATaGCTGTGGCCTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GSSSAAPKNRPNRGQASGLQGPR*LWPGSG
Trigger: CCCTGATCCAGGCCACAGCCATCTAGGGCCCTGAAG...ACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLPGRCV*APETAQ
Trigger: CTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGG...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCTCCCCTGAGGGACCCTaGAGAGCCCACGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QSRVGLCLHAAEDFHHPGSPEGP*RAHDQG
Trigger: GCCCTGGTCGTGGGCTCTCCAGGGTCCCTCAGGGGA...GCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCGTGTGTTACACTGCCTaGCATGGGCAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGVCYTA*HGQDPG
Trigger: TCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACAC...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGCCACCATCGCCCTCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACCGATGGTGCTGGCAATaGAGACCAGGAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: GHHRPPPSLLGGGGRSLYRWCWQ*RPGRPR
Trigger: TCGTGGTCTTCCTGGTCTTCATTGCCAGCACCATCG...GTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGAGGGCGATGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGCCACCATCGCCCTCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACTGGACCCCCAGGATCTaGTGCCTGGTTTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GHHRPPPSLLGGGGRSLYWTPRI*CLVSFL
Trigger: CAGAAACGAAACCAGGCATCAGATCCTGGGGGTCCA...GTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGAGGGCGATGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGCTAAGCCTCCAGCTCTaGTCTGAACAGGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQLSLQL*SEQAHP
Trigger: TGGGTGGGCCTGTTCAGATCAGAGCTGGAGGCTTAG...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp TCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGTCTCGTCCGGAATTGGACCTaGAGCCAGCGGGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: SANSVPQSGGHHRPPPSLVRNWT*SQRALI
Trigger: GATCAGGGCCCGCTGGCTTCAGGTCCAATTCCGGAC...GAGACTTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTGGAAGGCCAGCGTGGTaGTGGCCAGCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRAGRPAW*WPARPA
Trigger: GGCTGGCCTGGCTGGCCATCACCACGCTGGCCTTCC...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAAGAGGCCCAATCCCCTaGGGGACCCTGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASRGPIP*GTLESP
Trigger: TGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCT...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAGAGGCCCAATCCCCTaGGGGACCCTGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRRGPIP*GTLESP
Trigger: TGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCT...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAGAGAAGGGCGGCCTaGGGGAGATGCGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQQRRAA*GRCGNF
Trigger: AAAATTCCCGCATCTCCCGCAGGCCGCCCTTCTCTG...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AFQQIASLRVGATIALHQKRSRS*TVRLAL
Trigger: GAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTT...TTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPGGPHS*TVKRSR
Trigger: GCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCC...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGCCCGACTGCTCCCACTaGCTGGTCCCATTGCTAACT +
Preference number: 4 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQPDCSH*LVPLLT
Trigger: AGTTAGCAATGGGACCAGGCAGTGGGAGCAGTCGGG...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCTCTTGGAAGGAGGTaGGTGGGGACGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTPLGRR*VGTAGP
Trigger: TGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGG...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCCCACACGCAGCCTCTaGCTGGATGGCAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGPTRSL*LDGRIH
Trigger: ATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGGG...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCCCTCTCTCAGGTGGATaGTGGGCGTGGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFPLSGG*WAWEPM
Trigger: CATGGGCTCCCACGCCCAGCATCCACCTGAGAGAGG...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAACCTCGAGGACCTGGCTaGCAGCTGGAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GATPPSAGDTDKELSGLEPRGPG*QLETQL
Trigger: CAGCTGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGG...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATCCCCCTGGACTTGACACCCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 4 (lower is better)
Translates to: KARAPLSFQSLDPPGLDTPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...GGTGTCAAGTCCAGGGGGATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCGGGCTGTTCCACACCTaGTCCTGGGATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSGLFHT*SWDPAV
Trigger: CACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCC...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGAGGGCCGCCAGCCCCTaGCCAGCACACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWRAASP*PAHCRP
Trigger: GGGCCTGCAGTGTGCTGGGCAGGGGCTGGCGGCCCT...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGTCTCTTTACCAGGTCGGCCTaGAGGGACCGACCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SANSVPQSGGHHRPPPSLFTRSA*RDRPCA
Trigger: GGCACAGGGTCGGTCCCTCCAGGCCGACCTGGTAAA...GAGACTTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGAGCTCTTCACAGCTGTaGGGTACGGTGCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQSSSQL*GTVPFS
Trigger: CGAGAAGGGCACCGTACCCCACAGCTGTGAAGAGCT...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCTTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTLEGGA*GRPGQQ
Trigger: CTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAA...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CCA 90 bp CCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCACATCTGGCCACCCCTaGGCCAGCTGGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: PHLLLGTQTRSSPDWKESTSGHP*ASWHGD
Trigger: GTCTCCATGCCAGCTGGCCCAGGGGTGGCCAGATGT...GGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGGCCACGCAGCCTCTGCCTaGATGGCAGAATTCATGCAG +
Preference number: 4 (lower is better)
Translates to: RSPHYTWRRGDTRRAACGHAASA*MAEFMQ
Trigger: CTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTG...GCCACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTGGTGGATGCTGGGCGTaGGAGCCCATGGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVGGCWA*EPMGGA
Trigger: TGCCCCTCCCATGGGCTCCCACGCCCAGCATCCACC...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACCCAGAACGAGTCCTCTaGAGGTGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RPTPIVSLHHPHQGAGTHPERVL*RWTLGF
Trigger: AAAGCCCAGGGTCCACCTCCAGAGGACTCGTTCTGG...GTGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCTGGCCTCCAGGAGGCTaGTGCCCAGCCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QSRVGLCLHAAEDFHHPGWPPGG*CPATQR
Trigger: TCTCTGGGTGGCTGGGCACCAGCCTCCTGGAGGCCA...GCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCATGGCCTCCAGGAGGCTaGTGCCCAGCCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLGTQTRSSPDWKESPCPWPPGG*CPATQR
Trigger: TCTCTGGGTGGCTGGGCACCAGCCTCCTGGAGGCCA...TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp AGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTGCGACCTGGCTGCCAGCTaGAAACTCAGCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLGGLGFCPNPFPRGPGCDLAAS*KLSWSP
Trigger: TGGGGACCAGCTGAGTTTCCAGCTGGCAGCCAGGTC...GCAGCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCACACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAVQPPRTDPTGAKPQVPHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...TGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGGGCCCTAGATGGCTGTaGCCTGGATCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRGPRWL*PGSGLG
Trigger: GCCCAGCCCTGATCCAGGCCACAGCCATCTAGGGCC...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTGGCCCTAGATGGCTGTaGCCTGGATCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSMSACSRGFPSPWPWGCGPRWL*PGSGLG
Trigger: GCCCAGCCCTGATCCAGGCCACAGCCATCTAGGGCC...ACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGCCCTAGATGGCTGTaGCCTGGATCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASGPRWL*PGSGLG
Trigger: GCCCAGCCCTGATCCAGGCCACAGCCATCTAGGGCC...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCCTTCAGGGCCCTAGATaGCTGTGGCCTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSLQGPR*LWPGSG
Trigger: CCCTGATCCAGGCCACAGCCATCTAGGGCCCTGAAG...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATCCCCCTGGACTTGACACCCTTCAGGGCCCTAGATaGCTGTGGCCTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: KARAPLSFQSLDPPGLDTLQGPR*LWPGSG
Trigger: CCCTGATCCAGGCCACAGCCATCTAGGGCCCTGAAG...GGTGTCAAGTCCAGGGGGATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTTTCCACACCTGCTCCTaGGATCCAGCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DPAVQPPRTDPTGAKPQVFHTCS*DPAVQP
Trigger: GGGCTGCACTGCTGGATCCCAGGAGCAGGTGTGGAA...AACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAATTCCACACCTGCTCCTaGGATCCAGCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GATPPSAGDTDKELSGLEFHTCS*DPAVQP
Trigger: GGGCTGCACTGCTGGATCCCAGGAGCAGGTGTGGAA...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGCCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRPGRCV*APETAQ
Trigger: CTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGG...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGTCCCCTGAGGGACCCTaGAGAGCCCACGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: NSQPGQKRRRLRSNLVDQSPEGP*RAHDQG
Trigger: GCCCTGGTCGTGGGCTCTCCAGGGTCCCTCAGGGGA...CTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTCCTCCCCTGAGGGACCCTaGAGAGCCCACGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SMSACSRGFPSPWPWGCSSPEGP*RAHDQG
Trigger: GCCCTGGTCGTGGGCTCTCCAGGGTCCCTCAGGGGA...GGAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: GIQQCSPQEQTQPGPSLRSEATW*TSLRNP
Trigger: GGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA...CCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp ACAGCATCCGGCCAGGGTTGGGGGAGACAAGCTGGACGCCCTCCACATAGGCTGCGATGGTGCTGGCAATaGAGACCAGGAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: TASGQGWGRQAGRPPHRLRWCWQ*RPGRPR
Trigger: TCGTGGTCTTCCTGGTCTTCATTGCCAGCACCATCG...CAGCCTATGTGGAGGGCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCCTCCAGCTCTGATCTaGACAGGCCCACCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLPPALI*TGPPSA
Trigger: GGCGCTGGGTGGGCCTGTTCAGATCAGAGCTGGAGG...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTGTCCGGAATTGGACCTaGAGCCAGCGGGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPVRNWT*SQRALI
Trigger: GATCAGGGCCCGCTGGCTTCAGGTCCAATTCCGGAC...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTAGAGGCCCAATCCCCTaGGGGACCCTGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVRGPIP*GTLESP
Trigger: TGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCT...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TCTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTGGACCGGGAGCTTCTaGAGCGCCAGCCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: SASSPSGAHLQISRGKPNWTGSF*SASPPR
Trigger: CCGCGGAGGGCTGGCGCTGCAGAAGCTCCCGGTCCA...ATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCAGCGTGCGCCAGGCGTaGGCGGCGGCCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSSVRQA*AAASSR
Trigger: TCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCT...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCACAAGTGGGATCCCCTaGCTCCTTCCTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGTSGIP*LLPWTL
Trigger: CAGAGTCCAAGGAAGGAGGCAGGGGATCCCACTTGT...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp ACAGCATCCGGCCAGGGTTGGGGGAGACAAGCTGGACGCCCTCCACATAGGCTGCCCCTGCCTGCACTGTaGCTAAATGACAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: TASGQGWGRQAGRPPHRLPLPAL*LNDSAL
Trigger: AAGAGCGCTGTCATTTAGGCACAGTGCAGGCAGGGG...CAGCCTATGTGGAGGGCGTCCAGCTTGTCTCCCCCAACCCTGGCCGGATGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp ACTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCAGTGACACCTTCACATaGAGTCACACCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: TGALTSLHVASRGHTQGCSDTFT*SHTCTV
Trigger: GACAGTGCAGGTGTGACTGCATGTGAAGGTGTCACT...GCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCTCCTCCACTTGCTTCTaGGGGGCCTCAGCACACAGA +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSSSTCF*GASAHR
Trigger: TCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGAGGA...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTGCAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: SLGGLGFCPNPFPRGPGCSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...GCAGCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 4 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCAGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: PAAPSQGDVSGLRRQPSPGSMSA*SRGFPS
Trigger: TGATGGAAATCCTCGGCTGCATGCAGACATAGACCC...TGGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCCACTTCCCACCTTCCTaGCTGGGGAGAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISHFPPS*LGRGPI
Trigger: GATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTG...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCACCCCGGGTCATGCCTaGACTTCCCACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPTPGHA*TSHLPA
Trigger: GGCAGGAAGGTGGGAAGTGCAGGCATGACCCGGGGT...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCAACCCCGGGTCATGCCTaGACTTCCCACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGTQTRSSPDWKESPCPTPGHA*TSHLPA
Trigger: GGCAGGAAGGTGGGAAGTGCAGGCATGACCCGGGGT...TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGTCTCCGGGGTCCAAGGGACTaGGACAGAGGTCATCCTCGA +
Preference number: 4 (lower is better)
Translates to: SANSVPQSGGHHRPPPSLRGPRD*DRGHPR
Trigger: TCGAGGATGACCTCTGTCCCAGTCCCTTGGACCCCG...GAGACTTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: CLISVWGTSADFKGQTQFRPRKS*PFSDSG
Trigger: CCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCG...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCGCCCTCCACATAGGCTaGCCAGTCAGGTCCTACTGG +
Preference number: 4 (lower is better)
Translates to: PPSAGDTDKELSGLERVPALHIG*PVRSYW
Trigger: CCAGTAGGACCTGACTGGCCAGCCTATGTGGAGGGC...GGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp AACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCACCCCTGGGCCAGCTaGCATGGAGACAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: NSQPGQKRRRLRSNLVDQHPWAS*HGDSIR
Trigger: CCGGATGCTGTCTCCATGCCAGCTGGCCCAGGGGTG...CTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCACACAGACCCCTGCCATaGCTCCTGGCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASHRPLP*LLAQSS
Trigger: AGAGGACTGGGCCAGGAGCCATGGCAGGGGTCTGTG...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGACTCTCAGGTGGATGCTaGGCGTGGGAGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGLSGGC*AWEPMG
Trigger: TCCCATGGGCTCCCACGCCCAGCATCCACCTGAGAG...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGTCTGGAGGTGGACCCTaGGCTTTCCTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRSGGGP*AFLRGR
Trigger: CCTGCCCCTCAGGAAAGCCCAGGGTCCACCTCCAGA...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGATCTGGAGGTGGACCCTaGGCTTTCCTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGSGGGP*AFLRGR
Trigger: CCTGCCCCTCAGGAAAGCCCAGGGTCCACCTCCAGA...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCAGTCCCCATGTCCAGTaGGTCAGGGCTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PPSAGDTDKELSGLERVPSPHVQ*VRAGRG
Trigger: TCCCCTTCCAGCCCTGACCCACTGGACATGGGGACT...GGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCTTCAGGGCCCTAGATaGCTGTGGCCTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PHLLLGTQTRSSPDWKESLQGPR*LWPGSG
Trigger: CCCTGATCCAGGCCACAGCCATCTAGGGCCCTGAAG...GGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCCTTCAGGGCCCTAGATaGCTGTGGCCTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFLQGPR*LWPGSG
Trigger: CCCTGATCCAGGCCACAGCCATCTAGGGCCCTGAAG...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAATTCCACACCTGCTCCTaGGATCCAGCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPPHLLLGTQTRSSPDWKFHTCS*DPAVQP
Trigger: GGGCTGCACTGCTGGATCCCAGGAGCAGGTGTGGAA...TTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCCCATCACCCTGGCCATaGGGCTGTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: PPSAGDTDKELSGLERVPPSPWP*GCSTPA
Trigger: AGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGG...GGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCCCATCACCCTGGCCATaGGGCTGTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISPSPWP*GCSTPA
Trigger: AGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGG...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PAVQPPRTDPTGAKPQVPGFPSP*PWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCC...TGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAACAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPEQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGTCCCACCTTCCTGCCTaGGGAGAGGCCCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRSHLPA*GEAQSP
Trigger: AGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGA...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCTCCCACCTTCCTGCCTaGGGAGAGGCCCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPSHLPA*GEAQSP
Trigger: AGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGA...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCAGGGCTCACTACACGTaGCGTCGAGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPRAHYT*RRGDTR
Trigger: GCGTGTGTCCCCTCGACGCCACGTGTAGTGAGCCCT...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556320.1
ENST00000625459.1
3UTR CAA 72 bp CAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: QPGQKRRRLRSN*VDQPQEPRVMP
Trigger: AGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCGAAAAGGAAATTGTTaGGCGCCATGGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QSRVGLCLHAAEDFHHPGRKGNC*APWPAR
Trigger: CCGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCG...GCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp TCTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATCGCGCTCCTGCACCGTaGGGTTGGCGCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SASSPSGAHLQISRGKPNRAPAP*GWRSAT
Trigger: TGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCG...ATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCACCCAGCGCCAGCACCAAAGTCCAAAGCCCTTGTCCCTACACTGGACCCCCACGATGGTGCTGGCAATaGAGACCAGGAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: PPSASTKVQSPCPYTGPPRWCWQ*RPGRPR
Trigger: TCGTGGTCTTCCTGGTCTTCATTGCCAGCACCATCG...TGGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTGGTGCTGGCGCTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCCGATGGTGCTGGCAATaGAGACCAGGAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSRWCWQ*RPGRPR
Trigger: TCGTGGTCTTCCTGGTCTTCATTGCCAGCACCATCG...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACTGTCGCACCACATGGTaGAGCCCACGCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: VSPHACISANSVPQSGGHCRTTW*SPRSRW
Trigger: CCATCGTGAGCGTGGGCTTCACCATGTGGTGCGACA...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCCGGTGCCCTTCTCGGTaGTGGTGTCGCACCACATGG +
Preference number: 4 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASRCPSR*WCRTTW
Trigger: CCATGTGGTGCGACACCATCACCGAGAAGGGCACCG...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp AGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCCGGTGCCCTTCTCGGTaGTGGTGTCGCACCACATGG +
Preference number: 4 (lower is better)
Translates to: RQPSPGWVYVCMQPRISIRCPSR*WCRTTW
Trigger: CCATGTGGTGCGACACCATCACCGAGAAGGGCACCG...GATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp TCTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATGAAGCCAGCGGGCCCTaGTCAGTGCTGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SASSPSGAHLQISRGKPNEASGP*SVLAGA
Trigger: GGCTCCTGCCAGCACTGATCAGGGCCCGCTGGCTTC...ATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCGCGGCCTGCGGGAGATaGGGGAATTTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PRGRGTQLIQGQGGKSEFAACGR*GNFTRS
Trigger: CGACCTGGTAAAATTCCCGCATCTCCCGCAGGCCGC...GAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGCCCTACCTGGGCAATTaGAAACTGATCGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQPYLGN*KLIVEG
Trigger: GCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGG...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCGCAAGCCTCCCTTCTTaGCCAGAGCCCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLASLPS*PEPPTW
Trigger: CCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGCTTGC...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCGCCCCCTCCCAGCATTaGAAGCCTCCCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASAPSQH*KPPFLP
Trigger: GGGCAAGAAGGGAGGCTTGCAATGCTGGGAGGGGGC...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTGTGTCCCCACATGCCTaGATTTCAGCAAATAGCGTC +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACIVSPHA*ISANSV
Trigger: GACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGATCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTCACTGCAGACACACCTaGCTAGACACTCACACCTAC +
Preference number: 4 (lower is better)
Translates to: GSSSAAPKNRPNRGQASGHCRHT*LDTHTY
Trigger: GTAGGTGTGAGTGTCTAGGCAGGTGTGTCTGCAGTG...ACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCAACACGCACATTCACATaGACTTACGCACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAATRTFT*TYAHAA
Trigger: TGCAGCATGTGCGTAAGTGCATGTGAATGTGCGTGT...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCCATCACGCACACAATaGTCACACGCACAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLPSRTQ*SHAQAC
Trigger: GCACGCCTGTGCGTGTGAGCATTGTGTGCGTGATGG...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCCATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTTCCTCCACTTGCTTCTaGGGGGCCTCAGCACACAGA +
Preference number: 4 (lower is better)
Translates to: PISLGGLGFCPNPFPRGPSSTCF*GASAHR
Trigger: TCTGTGTGCTGAGGCCCCGCAGAAGCAAGTGGAGGA...AGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGACCTCGAGGACCTGGCTaGCAGCTGGAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGPRGPG*QLETQL
Trigger: CAGCTGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGG...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: EPPHLLLGTQTRSSPDWKSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...TTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CATAGGCTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HRLASQVLLGQPRGPVRGGSMSA*SRGFPS
Trigger: TGATGGAAATCCTCGGCTGCATGCAGACATAGACCC...GCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAGCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp TCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCACTTCCCACCTTCCTaGCTGGGGAGAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: SEATWWTSLRNPGSCLHFHFPPS*LGRGPI
Trigger: GATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTG...GAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCGGGGTCCAAGGGACTaGGACAGAGGTCATCCTCGA +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPRGPRD*DRGHPR
Trigger: TCGAGGATGACCTCTGTCCCAGTCCCTTGGACCCCG...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp ATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCAGCTCTTCACAGCTGTaGGGTACGGTGCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: ISLGGLGFCPNPFPRGPGSSSQL*GTVPFS
Trigger: CGAGAAGGGCACCGTACCCCACAGCTGTGAAGAGCT...GCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCGCCTGCCTCCTCCTCTaGATGGGGGAGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASACLLL*MGESSA
Trigger: TGCTGAGCTCTCCCCCATCCAGAGGAGGAGGCAGGC...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CACCTTCCTGCCTGGGGAGAGGCCCAATCCCCTGAGGGACCCTGGAGAGCCCACCAGCCTCTGCCTGGATaGCAGAATTCATGCAGAATT +
Preference number: 4 (lower is better)
Translates to: HLPAWGEAQSPEGPWRAHQPLPG*QNSCRI
Trigger: AATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTG...GTGGGCTCTCCAGGGTCCCTCAGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCCCAGAACGAGTCCTCTaGAGGTGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISPERVL*RWTLGF
Trigger: AAAGCCCAGGGTCCACCTCCAGAGGACTCGTTCTGG...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTGCAGCAGGGAGCACTTaGCAGCACTCGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLAAGST*QHSSQE
Trigger: TTCTTGGCTCGAGTGCTGCCAAGTGCTCCCTGCTGC...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGGTGGACCCAGGCACGTaGCCTCCAGGAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWVDPGT*PPGGWC
Trigger: GCACCAGCCTCCTGGAGGCCACGTGCCTGGGTCCAC...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGAAACTCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGAAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GNSAGPQGQSPLELPEPRRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...TCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGAGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCCATCACCCTGGCCATaGGGCTGTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPPSPWP*GCSTPA
Trigger: AGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGG...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPEGFPSP*PWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCC...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCCAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGAAACTCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGATCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: GNSAGPQGQSPLELPEPRSEATW*TSLRNP
Trigger: GGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA...TCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGAGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR TCA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGGTCCAATTCCCAGAGTaGGGAAGCCTTAACATTGCT +
Preference number: 4 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQVQFPE*GSLNIA
Trigger: AGCAATGTTAAGGCTTCCTCACTCTGGGAATTGGAC...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCGTGTGTTACACTGCCTaGCATGGGCAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRGRGTQLIQGQGGKSEFVCYTA*HGQDPG
Trigger: TCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACAC...GAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGCCCTCACGGGCCACTaGTGTGTCCCCACATGCCTG +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPALTGH*CVPTCL
Trigger: CAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGC...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPSPRVP*RGRRAC
Trigger: GCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCT...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCCCTGCCTCTTGGAAGGAGGTaGGTGGGGACGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: WQNSCRIRSGLSDIWPPLPLGRR*VGTAGP
Trigger: TGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGG...CAGGGGTGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTGGACACACGCAGGGCTaGATGTGGCCAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATGHTQG*MWPGPR
Trigger: CCTGGGCCCTGGCCACATGCAGCCCTGCGTGTGTCC...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp GGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCACCATCACGCACACAATaGTCACACGCACAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GDSPVQGGSMSACSRGFPPSRTQ*SHAQAC
Trigger: GCACGCCTGTGCGTGTGAGCATTGTGTGCGTGATGG...TGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp TCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCATCACGCACACAATaGTCACACGCACAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SEATWWTSLRNPGSCLHFPSRTQ*SHAQAC
Trigger: GCACGCCTGTGCGTGTGAGCATTGTGTGCGTGATGG...GAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGAGCCACCCCACCTTCTaGTGGGGACACAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: PSPGWVYVCMQPRISITLSHPTF*WGHRQG
Trigger: TCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp AGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SHPTFCWGHRQGALRTGKGWVYV*MQPRIS
Trigger: GGAAATCCTCGGCTGCATGCAGACATAGACCCACCC...CTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTACATGGGCAGGACCCTaGAGCTGCATTTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACITWAGP*SCICKI
Trigger: TATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGT...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CCACCCAGCGCCAGCACCAAAGTCCAAAGCCCTTGTCCCTACACTGGACCCCCATCCAAGTCGATGTCCTaGAGCTCTTCACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPSASTKVQSPCPYTGPPSKSMS*SSSQLW
Trigger: CCACAGCTGTGAAGAGCTCCAGGACATCGACTTGGA...TGGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTGGTGCTGGCGCTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAAGCCTCCTCCTCTGGATaGGGGAGAGCTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: AFQQIASLRVGATIALHQASSSG*GRAQQM
Trigger: CATTTGCTGAGCTCTCCCCCATCCAGAGGAGGAGGC...TTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTCTTCCCTCGAGGACCTaGCTGCCAGCTGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: GSMSACSRGFPSPWPWGCLPSRT*LPAGNS
Trigger: TGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGGGAAG...ACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGACTTCCCTCGAGGACCTaGCTGCCAGCTGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGLPSRT*LPAGNS
Trigger: TGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGGGAAG...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCACTTCCCTCGAGGACCTaGCTGCCAGCTGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LLGTQTRSSPDWKESPCPLPSRT*LPAGNS
Trigger: TGAGTTTCCAGCTGGCAGCCAGGTCCTCGAGGGAAG...TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp AGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCAGTCCCCATGTCCAGTaGGTCAGGGCTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RQPSPGWVYVCMQPRISISPHVQ*VRAGRG
Trigger: TCCCCTTCCAGCCCTGACCCACTGGACATGGGGACT...GATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp ACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TPPSAGDTDKELSGLERVHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...GACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCTTCCACACCTGCTCCTaGGATCCAGCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTFHTCS*DPAVQP
Trigger: GGGCTGCACTGCTGGATCCCAGGAGCAGGTGTGGAA...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCAGTCAGCCCAGTCCAGGGTaGGTCTATGTCTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: AGDTDKELSGLERVPMSSQPSPG*VYVCMQ
Trigger: CTGCATGCAGACATAGACCCACCCTGGACTGGGCTG...ACTGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp ATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTGGCTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: ISLGGLGFCPNPFPRGPGSEATW*TSLRNP
Trigger: GGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA...GCCAGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp AGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: SHPTFCWGHRQGALRTGKSEATW*TSLRNP
Trigger: GGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA...CTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGAAACTCAGCTGGTCCCCAAGGCCAGAGCCCCCTTGAGCTTCCAGAGCCTCGAGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GNSAGPQGQSPLELPEPRVSEAT*WTSLRN
Trigger: GTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC...TCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTTGGGGACCAGCTGAGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR TCA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSPHACISANSVPQSGGHPPPRS*TGRPRS
Trigger: ACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGG...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAGACCACGAAGGCGCTaGCCAGGAGGTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRARPRRR*PGGSGR
Trigger: CCTTCCTGAACCTCCTGGTCAGCGCCTTCGTGGTCT...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCACGGTGCCCTTCTCGGTaGTGGTGTCGCACCACATGG +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPRCPSR*WCRTTW
Trigger: CCATGTGGTGCGACACCATCACCGAGAAGGGCACCG...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCGCCCTCACGGGCCACTaGTGTGTCCCCACATGCCTG +
Preference number: 4 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIALTGH*CVPTCL
Trigger: CAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGC...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCAAATCCCCAACCAGATaGTGCCCCCGATTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFKSPTR*CPRFCG
Trigger: TCCACAGAATCGGGGGCATCATCTGGTTGGGGATTT...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTSPRVP*RGRRAC
Trigger: GCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCT...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCTCTATGTGGTACGTGTaGCCCCGAAATCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: PTFCWGHRQGALRTGKSPSMWYV*PRNPQP
Trigger: TGGTTGGGGATTTCGGGGGCACACGTACCACATAGA...GGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCACTGCAGACACACCTaGCTAGACACTCACACCTAC +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLHCRHT*LDTHTY
Trigger: GTAGGTGTGAGTGTCTAGGCAGGTGTGTCTGCAGTG...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTACATGCTGCACACACTaGAGACACACCTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLTCCTH*RHTCLD
Trigger: GTCTAGGCAGGTGTGTCTGCAGTGTGTGCAGCATGT...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTGGGCTGTTCCACACCTaGTCCTGGGATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRAGLFHT*SWDPAV
Trigger: CACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCC...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp CAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: QPGQKRRRLRSNLVDQPQGWVYV*MQPRIS
Trigger: GGAAATCCTCGGCTGCATGCAGACATAGACCCACCC...CTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASGWVYV*MQPRIS
Trigger: GGAAATCCTCGGCTGCATGCAGACATAGACCCACCC...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCTTACACTGCCTGACATaGGCAGGACCCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLLHCLT*AGPWSC
Trigger: GCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAA...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCGTGGGCAGGAGGGGGTaGACCGGGAGCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGVGRRG*TGSFCS
Trigger: GCTGCAGAAGCTCCCGGTCCACCCCCTCCTGCCCAC...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGTTTACCAGGTCGGCCTaGAGGGACCGACCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRFTRSA*RDRPCA
Trigger: GGCACAGGGTCGGTCCCTCCAGGCCGACCTGGTAAA...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCCTGCCTCCTCCTCTaGATGGGGGAGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LISVWGTSADFKGQTQFQACLLL*MGESSA
Trigger: TGCTGAGCTCTCCCCCATCCAGAGGAGGAGGCAGGC...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTGTATCAGCTTCCCCCTaGCTAGGGGACTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: HACISANSVPQSGGHHRPVSASP*LGDSSK
Trigger: CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATAC...AGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCCCCTGCCTCCTTCCTTaGACTCTGTATCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRGRGTQLIQGQGGKSEFPCLLP*TLYQLP
Trigger: GGGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGG...GAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCACCCTTGGAGGGCTCCTaGCCAGGAGAAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPPLEGS*PGEASS
Trigger: TGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGG...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CCGCCCCACACCCATAGTCTCTCTGCACCATCCTCATCAGGGAGCCGGCACCCACAGCCTCTGCCTGGATaGCAGAATTCATGCAGAATT +
Preference number: 4 (lower is better)
Translates to: PPHTHSLSAPSSSGSRHPQPLPG*QNSCRI
Trigger: AATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTG...TGGGTGCCGGCTCCCTGATGAGGATGGTGCAGAGAGACTATGGGTGTGGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp CCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGCCCAGTCCTCTATGTaGTACGTGTGCCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: PARTEAKASQKQLGGPASAQSSM*YVCPRN
Trigger: ATTTCGGGGGCACACGTACCACATAGAGGACTGGGC...TGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: ARTEAKASQKQLGGPASGRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PSPGWVYVCMQPRISITLRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QLGGPASGTPGHACTSHLVSEAT*WTSLRN
Trigger: GTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC...AAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGCAGTCCAGGCTGAAGTaGTTCCTTTGCGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LISVWGTSADFKGQTQFQQSRLK*FLCGGP
Trigger: GGGACCCCCGCAAAGGAATCACTTCAGCCTGGACTG...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCGTTTGCAGTCCAGGCTaGAGTGATTCCTTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASVCSPG*SDSFAG
Trigger: CCCCGCAAAGGAATCACTTCAGCCTGGACTGCAAAC...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAAGACCACGAAGGCGCTaGCCAGGAGGTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPRPRRR*PGGSGR
Trigger: CCTTCCTGAACCTCCTGGTCAGCGCCTTCGTGGTCT...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTTGTCGCACCACATGGTaGAGCCCACGCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: ATDVSPHACISANSVPQSCRTTW*SPRSRW
Trigger: CCATCGTGAGCGTGGGCTTCACCATGTGGTGCGACA...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCTGCACTGTGCCTAAATaGCAGCGCTCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISCTVPK*QRSSPL
Trigger: AAGAGGAGAAGAGCGCTGTCATTTAGGCACAGTGCA...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR TCA 90 bp ACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCTCGTGCACACTCAGTaGCACCTTCACATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TPPSAGDTDKELSGLERVLVHTQ*HLHMQS
Trigger: TGACTGCATGTGAAGGTGTCACTGAGTGTGCACGAG...GACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCGCAAGCCTCCCTTCTTaGCCAGAGCCCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSASLPS*PEPPTW
Trigger: CCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGCTTGC...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCAGACCCCAGGGCCTTaGCACTTCCTGATTCTAACT +
Preference number: 4 (lower is better)
Translates to: CPHMPAFQQIASLRVGATQTPGP*HFLILT
Trigger: AGTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTG...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTCCTTCCTTGGACTCTGTATCAGCTTCCCCCTGGCTAGGGGACTCCTCTAAGACAAGTGGGATCCCCTaGCTCCTTCCTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PPSLDSVSASPWLGDSSKTSGIP*LLPWTL
Trigger: CAGAGTCCAAGGAAGGAGGCAGGGGATCCCACTTGT...CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATACAGAGTCCAAGGAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp AACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCCCTGCCTGCACTGTaGCTAAATGACAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: NSQPGQKRRRLRSNLVDQPLPAL*LNDSAL
Trigger: AAGAGCGCTGTCATTTAGGCACAGTGCAGGCAGGGG...CTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp TCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTCCCCCCTGCCTGCACTGTaGCTAAATGACAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: SMSACSRGFPSPWPWGCSPLPAL*LNDSAL
Trigger: AAGAGCGCTGTCATTTAGGCACAGTGCAGGCAGGGG...GGAACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp CAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCACTGCAGACACACCTaGCTAGACACTCACACCTAC +
Preference number: 4 (lower is better)
Translates to: QSRVGLCLHAAEDFHHPGHCRHT*LDTHTY
Trigger: GTAGGTGTGAGTGTCTAGGCAGGTGTGTCTGCAGTG...GCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGACATGCTGCACACACTaGAGACACACCTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QPGQKRRRLRSNLVDQPQTCCTH*RHTCLD
Trigger: GTCTAGGCAGGTGTGTCTGCAGTGTGTGCAGCATGT...CTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCACACGCACATTCACATaGACTTACGCACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSTRTFT*TYAHAA
Trigger: TGCAGCATGTGCGTAAGTGCATGTGAATGTGCGTGT...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QPGQKRRRLRSNLVDQPQSAHRL*RMGRQL
Trigger: GAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGA...CTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp TCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SEATWWTSLRNPGSCLHFSAHRL*RMGRQL
Trigger: GAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGA...GAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTACCCCGGGTCATGCCTaGACTTCCCACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATTPGHA*TSHLPA
Trigger: GGCAGGAAGGTGGGAAGTGCAGGCATGACCCGGGGT...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCACACAGGCCGACTCTaGGTCGTCAGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLHTGRL*VVSSSS
Trigger: TGATGAGGAACTGACGACCCAGAGTCGGCCTGTGTG...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATCGCCCTCCACCAATCCAAGTCGATGTCCTaGAGCTCTTCACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFQQIASLRVGATIALHQSKSMS*SSSQLW
Trigger: CCACAGCTGTGAAGAGCTCCAGGACATCGACTTGGA...TTGGTGGAGGGCGATGGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCATGTCCAGCAGTAAATaGCCCCCTCCCAGCATTGCA +
Preference number: 4 (lower is better)
Translates to: CPHMPAFQQIASLRVGATMSSSK*PPPSIA
Trigger: TGCAATGCTGGGAGGGGGCCATTTACTGCTGGACAT...GGTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCTTCAGAGGCCAGCCTaGGGTCCGGAATTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRLQRPA*GPELDL
Trigger: CAGGTCCAATTCCGGACCCCAGGCTGGCCTCTGAAG...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCTTCAGAGGCCAGCCTaGGGTCCGGAATTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CLISVWGTSADFKGQTQFLQRPA*GPELDL
Trigger: CAGGTCCAATTCCGGACCCCAGGCTGGCCTCTGAAG...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCCTTGGAGGGCTCCTaGCCAGGAGAAGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIPLEGS*PGEASS
Trigger: TGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGG...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTATGCCCCCGATTCTGTaGAGCCCAGATTACCACTTC +
Preference number: 4 (lower is better)
Translates to: GSMSACSRGFPSPWPWGCMPPIL*SPDYHF
Trigger: GAAGTGGTAATCTGGGCTCCACAGAATCGGGGGCAT...ACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGGACCTGGCTGCCAGCTaGAAACTCAGCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWDLAAS*KLSWSP
Trigger: TGGGGACCAGCTGAGTTTCCAGCTGGCAGCCAGGTC...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp AGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: RTEAKASQKQLGGPASGTRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...GGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTCCCACCTTCCTGCCTaGGGAGAGGCCCAATCCCCT +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATSHLPA*GEAQSP
Trigger: AGGGGATTGGGCCTCTCCCCAGGCAGGAAGGTGGGA...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SEATWWTSLRNPGSCLHFVSEAT*WTSLRN
Trigger: GTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC...GAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCAGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GDSPVQGGSMSACSRGFPVSEAT*WTSLRN
Trigger: GTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC...TGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp TGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCCCTGCGAAAAGGAAATTGTTaGGCGCCATGGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WQNSCRIRSGLSDIWPPLRKGNC*APWPAR
Trigger: CCGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCG...CAGGGGTGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR TCA 90 bp CCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGTGCACTGTGCCTAAATaGCAGCGCTCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSPGWVYVCMQPRISITLCTVPK*QRSSPL
Trigger: AAGAGGAGAAGAGCGCTGTCATTTAGGCACAGTGCA...CAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR TCA 90 bp CAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCTGCACTGTGCCTAAATaGCAGCGCTCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QSRVGLCLHAAEDFHHPGCTVPK*QRSSPL
Trigger: AAGAGGAGAAGAGCGCTGTCATTTAGGCACAGTGCA...GCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR TCA 90 bp GGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTAGATTACCACTTCCCTaGCCCTCAGCCAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: GLCLHAAEDFHHPGHGAVRLPLP*PSAKHR
Trigger: TCTGTGCTTGGCTGAGGGTCAGGGAAGTGGTAATCT...AACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCAGGCCAGAGCCCCCTTaGGCTTCCAGAGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVRPEPP*ASRASI
Trigger: GATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCT...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGGACGTGTGTTACACTaGCTGACATGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LISVWGTSADFKGQTQFQGRVLH*LTWAGP
Trigger: GGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCC...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGGGACGTGTGTTACACTaGCTGACATGGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRGRVLH*LTWAGP
Trigger: GGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCC...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCACAGAGAAGGGCGGCCTaGGGGAGATGCGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPQRRAA*GRCGNF
Trigger: AAAATTCCCGCATCTCCCGCAGGCCGCCCTTCTCTG...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCCCTACCTGGGCAATTaGAAACTGATCGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VSPHACISANSVPQSGGHPYLGN*KLIVEG
Trigger: GCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGG...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCATCCACACAGGAGCCTaGCTCCTCCTCTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSIHTGA*LLLWMG
Trigger: CCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGAT...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTATTTGCCATCAGACTaGACTCACACCTTAATCCAA +
Preference number: 4 (lower is better)
Translates to: GFPLRPSRATDVSPHACIYLPSD*THTLIQ
Trigger: TTGGATTAAGGTGTGAGTGCAGTCTGATGGCAAATA...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGTCATTTGAGCGTATTTaGCATCAGACTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQSFERI*HQTALT
Trigger: TGTGAGTGCAGTCTGATGGCAAATACGCTCAAATGA...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCAGAGGCTGGAAGGTaGCGTGAGCTCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: PGWQNSCRIRSGLSDIWPPEAGR*RELLPT
Trigger: TGTGGGGAGGAGCTCACGGCACCTTCCAGCCTCTGG...TGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCAATCACACCCTCCCATaGACAAAGGCACTCACAATC +
Preference number: 4 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFNHTLP*TKALTI
Trigger: GATTGTGAGTGCCTTTGTGCATGGGAGGGTGTGATT...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp TCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCCATGTCCGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: SAGDTDKELSGLERVPMSGSMSA*SRGFPS
Trigger: TGATGGAAATCCTCGGCTGCATGCAGACATAGACCC...GGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTCACTTCCCACCTTCCTaGCTGGGGAGAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATHFPPS*LGRGPI
Trigger: GATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTG...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGGCCTCCTCCTCTGGATaGGGGAGAGCTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRASSSG*GRAQQM
Trigger: CATTTGCTGAGCTCTCCCCCATCCAGAGGAGGAGGC...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCCAGGATCTGATGCCTaGTTTCGTTTCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLPGSDA*FRFWHH
Trigger: GTGGTGCCAGAAACGAAACCAGGCATCAGATCCTGG...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GCCAGCACCAAAGTCCAAAGCCCTTGTCCCTACACTGGACCCCCAGGATCTGATCCAGGATCTGATGCCTaGTTTCGTTTCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: ASTKVQSPCPYTGPPGSDPGSDA*FRFWHH
Trigger: GTGGTGCCAGAAACGAAACCAGGCATCAGATCCTGG...ATCAGATCCTGGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTGGTGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp CTCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCTGCCTCATCTCCGTCTaGGGCACATCTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LPLPGPIANYLIHTGACLCLISV*GTSADF
Trigger: GAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA...GAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTGCGCTCTTCTCCTCTTaGAAGGAGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATALFSS*KEVRGD
Trigger: GTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGC...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACCTCTCCCCGGGAAGGTaGGCGCAGCAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QFSQSGIRTGISLTASQDLSPGR*AQQQGA
Trigger: TGCTCCCTGCTGCTGCGCCCACCTTCCCGGGGAGAG...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTAGTCCCCATGTCCAGTaGGTCAGGGCTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATSPHVQ*VRAGRG
Trigger: TCCCCTTCCAGCCCTGACCCACTGGACATGGGGACT...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR TCA 90 bp CTGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTGTTTGCAGTCCAGGCTaGAGTGATTCCTTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPHLRLGHICRFQGANPIVCSPG*SDSFAG
Trigger: CCCCGCAAAGGAATCACTTCAGCCTGGACTGCAAAC...AATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGCCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LISVWGTSADFKGQTQFQPPPRS*TGRPRS
Trigger: ACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGG...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAACGATCCCCCTGGACTTaGCACCCCCGATGGGCACCT +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSERSPWT*HPRWAP
Trigger: AGGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCG...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSSPRVP*RGRRAC
Trigger: GCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCT...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 4 (lower is better)
Translates to: PLPGWQNSCRIRSGLSDIPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...GATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWGWVYV*MQPRIS
Trigger: GGAAATCCTCGGCTGCATGCAGACATAGACCCACCC...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCACACAGGCCGACTCTaGGTCGTCAGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: CLISVWGTSADFKGQTQFHTGRL*VVSSSS
Trigger: TGATGAGGAACTGACGACCCAGAGTCGGCCTGTGTG...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGCCCTGCCTCCTTCCTTaGACTCTGTATCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRPCLLP*TLYQLP
Trigger: GGGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGG...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGCGCTCTTCTCCTCTTaGAAGGAGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DIINSQPGQKRRRLRSNLALFSS*KEVRGD
Trigger: GTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGC...CAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACCCCTCCTCTCTCAGGTaGATGCTGGGCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QFSQSGIRTGISLTASQDPSSLR*MLGVGA
Trigger: GGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGG...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCCGAGTCCTCTGGAGGTaGACCCTGGGCTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVRVLWR*TLGFPE
Trigger: CTCAGGAAAGCCCAGGGTCCACCTCCAGAGGACTCG...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAACCAGGGCGATGTGTCTaGGCTCCGGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSEPGRCV*APETAQ
Trigger: CTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGG...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp GCCAGCACCAAAGTCCAAAGCCCTTGTCCCTACACTGGACCCCCAGGATCTGATGTCCAATTCCCAGAGTaGGGAAGCCTTAACATTGCT +
Preference number: 4 (lower is better)
Translates to: ASTKVQSPCPYTGPPGSDVQFPE*GSLNIA
Trigger: AGCAATGTTAAGGCTTCCTCACTCTGGGAATTGGAC...ATCAGATCCTGGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTGGTGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCCCGAAATGCAATGTATaGGGGGAGGGGCCAGATCGT +
Preference number: 4 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSPKCNV*GEGPDR
Trigger: ACGATCTGGCCCCTCCCCTCATACATTGCATTTCGG...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp AGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCAGACCACGAAGGCGCTaGCCAGGAGGTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGIRTGISLTASQDRSEGRPRRR*PGGSGR
Trigger: CCTTCCTGAACCTCCTGGTCAGCGCCTTCGTGGTCT...GCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCTGGACCCCCAGGATCTaGTGCCTGGTTTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIWTPRI*CLVSFL
Trigger: CAGAAACGAAACCAGGCATCAGATCCTGGGGGTCCA...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCGCAGGGTGGCAAATCTaGATTCACAAGTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: CLISVWGTSADFKGQTQFAGWQI*IHKWDP
Trigger: GGGATCCCACTTGTGAATTCAGATTTGCCACCCTGC...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAAGGCCAGAGCCCCCTTaGGCTTCCAGAGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSERPEPP*ASRASI
Trigger: GATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCT...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTCAGACCCCAGGGCCTTaGCACTTCCTGATTCTAACT +
Preference number: 4 (lower is better)
Translates to: ATDVSPHACISANSVPQSQTPGP*HFLILT
Trigger: AGTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTG...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGAGTCACACCCTCTCGTaGACACTCAGTGACACCTTC +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWSHTLS*TLSDTF
Trigger: GAAGGTGTCACTGAGTGTGCACGAGAGGGTGTGACT...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR GCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCCCCCGATGGGCACCTaGCAGCCTCACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASPPMGT*QPHSRD
Trigger: GTCCCGGGAGTGAGGCTGGCAGGTGCCCATCGGGGG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGGGCTGTTCCACACCTaGTCCTGGGATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGIRTGISLTASQDRSEGGLFHT*SWDPAV
Trigger: CACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCC...GCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCAGCTCTTCACAGCTGTaGGGTACGGTGCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGSSSQL*GTVPFS
Trigger: CGAGAAGGGCACCGTACCCCACAGCTGTGAAGAGCT...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTATGTCCAGCAGTAAATaGCCCCCTCCCAGCATTGCA +
Preference number: 4 (lower is better)
Translates to: ATDVSPHACISANSVPQSMSSSK*PPPSIA
Trigger: TGCAATGCTGGGAGGGGGCCATTTACTGCTGGACAT...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCTGCCTCATCTCCGTCTaGGGCACATCTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: CLISVWGTSADFKGQTQFCLISV*GTSADF
Trigger: GAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTCAGAAGCAACTTGGTaGACCAGCCTCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATSEATW*TSLRNP
Trigger: GGGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGA...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR TCA 90 bp CCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PGWQNSCRIRSGLSDIWPPPPRS*TGRPRS
Trigger: ACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGG...TGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTGCCAAACTGGGCAATTaGAAACTGATCGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PHAASAWMAEFMQNSFRAAKLGN*KLIVEG
Trigger: GCCTTCTACGATCAGTTTGCAATTGCCCAGTTTGGC...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp GATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGCCCCTGCCTGCACTGTaGCTAAATGACAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: DIINSQPGQKRRRLRSNLPLPAL*LNDSAL
Trigger: AAGAGCGCTGTCATTTAGGCACAGTGCAGGCAGGGG...CAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR GCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACCCTGGGATCCAGCAGTaGAGCCCCCAAGAACAGACC +
Preference number: 4 (lower is better)
Translates to: QFSQSGIRTGISLTASQDPGIQQ*SPQEQT
Trigger: GGTCTGTTCTTGGGGGCTGCACTGCTGGATCCCAGG...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: SLTASQDRSEGVSEATWWGSMSA*SRGFPS
Trigger: TGATGGAAATCCTCGGCTGCATGCAGACATAGACCC...CCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACCACTTCCCACCTTCCTaGCTGGGGAGAGGCCCAATC +
Preference number: 4 (lower is better)
Translates to: QFSQSGIRTGISLTASQDHFPPS*LGRGPI
Trigger: GATTGGGCCTCTCCCCAGGCAGGAAGGTGGGAAGTG...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCACCCCTGTCCAAGTCGATGTCCTaGAGCTCTTCACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WQNSCRIRSGLSDIWPPLSKSMS*SSSQLW
Trigger: CCACAGCTGTGAAGAGCTCCAGGACATCGACTTGGA...CAGGGGTGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CCA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCGTATCAGCTTCCCCCTaGCTAGGGGACTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGVSASP*LGDSSK
Trigger: CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATAC...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVRSSPD*KESPCP
Trigger: TGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCT...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAATTCCACACCTGCTCCTaGGATCCAGCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSEFHTCS*DPAVQP
Trigger: GGGCTGCACTGCTGGATCCCAGGAGCAGGTGTGGAA...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAACCATCACCCTGGCCATaGGGCTGTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSEPSPWP*GCSTPA
Trigger: AGCAGGTGTGGAACAGCCCCATGGCCAGGGTGATGG...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVGFPSP*PWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCC...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp ATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: ISLTASQDRSEGVSEATWGFPSP*PWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCC...CCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCGTGTCCCCACATGCCTaGATTTCAGCAAATAGCGTC +
Preference number: 4 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIVSPHA*ISANSV
Trigger: GACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGCACACAGACTCTaGAGAATGGGAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVSAHRL*RMGRQL
Trigger: GAGCTGCCTTCCCATTCTGCAGAGTCTGTGTGCTGA...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp AGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGGGTGGGTCTATGTCTaGATGCAGCCGAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SGIRTGISLTASQDRSEGGWVYV*MQPRIS
Trigger: GGAAATCCTCGGCTGCATGCAGACATAGACCCACCC...GCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATAGGGCCGCCAGCCCCTaGCCAGCACACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRIFTFSLARVELEQGYHRAASP*PAHCRP
Trigger: GGGCCTGCAGTGTGCTGGGCAGGGGCTGGCGGCCCT...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAACATGGGCAGGACCCTaGAGCTGCATTTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: PHLRLGHICRFQGANPIPTWAGP*SCICKI
Trigger: TATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGT...TGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR TCA 90 bp CCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTAAGTGACATCTGGCCATGCACTGTGCCTAAATaGCAGCGCTCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGWQNSCRIRSGLSDIWPCTVPK*QRSSPL
Trigger: AAGAGGAGAAGAGCGCTGTCATTTAGGCACAGTGCA...TGGCCAGATGTCACTTAGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR GCA 90 bp GGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTACACGCACATTCACATaGACTTACGCACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: GISLTASQDRSEGVSEATTRTFT*TYAHAA
Trigger: TGCAGCATGTGCGTAAGTGCATGTGAATGTGCGTGT...AGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCCCAGCTCCTCCACTTaGTTCTGCGGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASPSSST*FCGASA
Trigger: TGCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAAGGCGTCGGGTCTATGTCTGCATaGAGCCGAGGATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GIRTGISLTASQDRSEGVGSMSA*SRGFPS
Trigger: TGATGGAAATCCTCGGCTGCATGCAGACATAGACCC...GACGCCTTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCACCCCGGGTCATGCCTaGACTTCCCACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASTPGHA*TSHLPA
Trigger: GGCAGGAAGGTGGGAAGTGCAGGCATGACCCGGGGT...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp CAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACAGAAGCGAATCCAAGTCGATGTCCTaGAGCTCTTCACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QSGIRTGISLTASQDRSESKSMS*SSSQLW
Trigger: CCACAGCTGTGAAGAGCTCCAGGACATCGACTTGGA...TTCGCTTCTGTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR TCA 90 bp CTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCTCGTTCAGGGCTAAGTaGCATCTGGCCACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LYFQFSQSGIRTGISLTASFRAK*HLATPG
Trigger: CCCAGGGGTGGCCAGATGTCACTTAGCCCTGAACGA...GGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATCTGGGCCAGCTGGCATaGAGACAGCATCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRIFTFSLARVELEQGYHLGQLA*RQHPAR
Trigger: CCTGGCCGGATGCTGTCTCCATGCCAGCTGGCCCAG...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATCCCTCCTCTCTCAGGTaGATGCTGGGCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRIFTFSLARVELEQGYHPSSLR*MLGVGA
Trigger: GGCTCCCACGCCCAGCATCCACCTGAGAGAGGAGGG...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCCAGAACGAGTCCTCTaGAGGTGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASPERVL*RWTLGF
Trigger: AAAGCCCAGGGTCCACCTCCAGAGGACTCGTTCTGG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCGCAGCAGGGAGCACTTaGCAGCACTCGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASAAGST*QHSSQE
Trigger: TTCTTGGCTCGAGTGCTGCCAAGTGCTCCCTGCTGC...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCACCCCACCTTCTGCTaGGGACACAGACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASHPTFC*GHRQGA
Trigger: AGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCCTTATTTGCCATCAGACTaGACTCACACCTTAATCCAA +
Preference number: 4 (lower is better)
Translates to: RSLYKGRVANLNSQVGSPYLPSD*THTLIQ
Trigger: TTGGATTAAGGTGTGAGTGCAGTCTGATGGCAAATA...AGGGGATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCTCATTTGAGCGTATTTaGCATCAGACTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGSFERI*HQTALT
Trigger: TGTGAGTGCAGTCTGATGGCAAATACGCTCAAATGA...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR GCA 90 bp CAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCAGGACGCCAAACTGGGCAATTaGAAACTGATCGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QFSQSGIRTGISLTASQDAKLGN*KLIVEG
Trigger: GCCTTCTACGATCAGTTTGCAATTGCCCAGTTTGGC...GTCCTGGCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCCACGCAGCCTCTGCCTaGATGGCAGAATTCATGCAG +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASHAASA*MAEFMQ
Trigger: CTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTG...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CCA 90 bp TTAAGGATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATCTCTCAGGTGGATGCTaGGCGTGGGAGCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LRIFTFSLARVELEQGYHLSGGC*AWEPMG
Trigger: TCCCATGGGCTCCCACGCCCAGCATCCACCTGAGAG...ATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR GCA 90 bp GATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGGGCTGTTCCACACCTaGTCCTGGGATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DLYFQFSQSGIRTGISLTGLFHT*SWDPAV
Trigger: CACTGCTGGATCCCAGGAGCAGGTGTGGAACAGCCC...TGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CCA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCGTCTCAGAAGCAACTTaGTGGACCAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YFQFSQSGIRTGISLTASVSEAT*WTSLRN
Trigger: GTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGAC...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR GCA 90 bp CTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCACATGCTGCACACACTaGAGACACACCTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: LYFQFSQSGIRTGISLTATCCTH*RHTCLD
Trigger: GTCTAGGCAGGTGTGTCTGCAGTGTGTGCAGCATGT...GGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CCA 90 bp GATCTTTACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGGATTTCCATCACCCTaGCCATGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: DLYFQFSQSGIRTGISLTGFPSP*PWGCST
Trigger: TGTGGAACAGCCCCATGGCCAGGGTGATGGAAATCC...TGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTAAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS GCA 90 bp CTGGCGAGCAGGCTGAAGCGGCAGGCGGCCGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGCTCCTGCACCGTGAGGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: LASRLKRQAAGGPHS*TVKRSRSCTVRLAL
Trigger: GAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCCGGCCGCCTGCCGCTTCAGCCTGCTCGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS GCA 90 bp GCGGCCGGCGGGCCCCACTCCTGCACCGTGAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTCAGCCACATGCCCTCGGTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AAGGPHSCTVKRSRS*TVRLALSHMPSVKS
Trigger: GCTCTTCACCGAGGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCCGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS-3UTR CAA 90 bp CCCAGCTGCCCCTTCCCAGGGCGATGTGTCTGGGCTCCGGAGACAGCCCAGTCCTCCCAGCTCCTCCACTaGCTTCTGCGGGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PSCPFPGRCVWAPETAQSSQLLH*LLRGLS
Trigger: GCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGGA...GGACTGGGCTGTCTCCGGAGCCCAGACACATCGCCCTGGGAAGGGGCAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS GCA 90 bp CGGAGAAGAAGGAGCCCTCGTGTCCCTTGCAGAGGAAGAAGAGCGTaGGCCAGGCGTGCGCGGCGGCCAGCAGCAGAGACAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RRRRSPRVPCRGRRA*ARRARRPAAETGGW
Trigger: CCAGCCTCCTGTCTCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCTTCTTCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS-3UTR CAA 90 bp CTGGGGCGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATCCTGCACCGTGAGGTaGGCGCTCAGCCACATGCCC +
Preference number: 5 (lower is better)
Translates to: LGRSPHYTWRRGDTRRAASCTVR*ALSHMP
Trigger: GGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGA...TGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS CCA 90 bp AGCCACATGCCCTCGGTGAAGAGCAGGCAGCGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGGACCACCACCACGAAGCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: SHMPSVKSRQRPRKS*PFSDSGTTTTKLNR
Trigger: CCTGTTCAGCTTCGTGGTGGTGGTCCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS-3UTR CAA 90 bp GGCCACCATCGCCCTCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACCCATGTCCAGCACCCTaGGAGGGCTCCTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GHHRPPPSLLGGGGRSLYPCPAP*EGSWPG
Trigger: TCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG...GTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGAGGGCGATGGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCCACCAAGTCTCCTAGGGGGCGGGGGACGCAGCTTATACAAGGGCAGGGTGGCCCATGTCCAGCACCCTaGGAGGGCTCCTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: STKSPRGRGTQLIQGQGGPCPAP*EGSWPG
Trigger: TCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG...GCCACCCTGCCCTTGTATAAGCTGCGTCCCCCGCCCCCTAGGAGACTTGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CTGGCCAGTCAGGTCCTACTGGGACAGCCAAGGGGCCCTGTGCGAGGCCTGGAGAGCGCTCTTCTCCTCTaGGAAGGAGGTGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: LASQVLLGQPRGPVRGLESALLL*EGGAWG
Trigger: TCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCT...CTCCAGGCCTCGCACAGGGCCCCTTGGCTGTCCCAGTAGGACCTGACTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS CCA 90 bp AGAAGGGCGGCCTGCGGGAGATGCGGGAATTTTACCAGGTCGGCCTaGAGGGACCGACCCTGTGCCGCTAAAGACTTCGGGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RRAACGRCGNFTRSA*RDRPCAAKDFGSHL
Trigger: CAGGTGGCTCCCGAAGTCTTTAGCGGCACAGGGTCGGTCCCTCCAGGCCGACCTGGTAAAATTCCCGCATCTCCCGCAGGCCGCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGGCGAGCCCTCGTGTCCCTaGCAGAGGAAGAAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: RSPHYTWRRGDTRRAACGEPSCP*QRKKSV
Trigger: CACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTC...GCCACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CAA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGGCGAAAAGGAAATTGTaGAGCGCCATGGCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQAKRKL*SAMAGP
Trigger: CGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCGC...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CCATGTCCAGCACCCTTGGAGGGCTCCTGGCCAGGAGAAGCGTCCTCAGGCCAGCAAAGTCCAAAGCCCTaGTCCCTACACTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: PCPAPLEGSWPGEASSGQQSPKP*SLHWTP
Trigger: GGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTG...CTGGCCTGAGGACGCTTCTCCTGGCCAGGAGCCCTCCAAGGGTGCTGGACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp AGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGTCCCAGCTCCTCCACTaGCTTCTGCGGGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SHPTFCWGHRQGALRTGKSQLLH*LLRGLS
Trigger: GCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGGA...CTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp CCCATCAGCTTAGGGGGCCTCGGATTCTGTCCAAACCCCTTCCCTCGAGGACCTTCGATCCCCCTGGACTaGACACCCCCGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PISLGGLGFCPNPFPRGPSIPLD*TPPMGT
Trigger: GGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCGA...AGGTCCTCGAGGGAAGGGGTTTGGACAGAATCCGAGGCCCCCTAAGCTGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCTCGATCCCCCTGGACTaGACACCCCCGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISSIPLD*TPPMGT
Trigger: GGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCGA...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS CCA 90 bp CTGTGCCTAAATGACAGCGCTCTTCTCCTCTTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAGCAGCTCCTTCTCGTGGATCAGGCT +
Preference number: 5 (lower is better)
Translates to: LCLNDSALLLLEGGA*GRPGQQQLLLVDQA
Trigger: AGCCTGATCCACGAGAAGGAGCTGCTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCTGTCATTTAGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CAA 90 bp GGGTTCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTGCTGAAGTGATTCCTTaGCGGGGGTCCCGAAATGCA +
Preference number: 5 (lower is better)
Translates to: GFPLRPSRATDVSPHACIAEVIP*RGSRNA
Trigger: TGCATTTCGGGACCCCCGCAAAGGAATCACTTCAGC...AATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CAGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGTCCTGCACCGTGAGGTaGGCGCTCAGCCACATGCCC +
Preference number: 5 (lower is better)
Translates to: QPGQKRRRLRSNLVDQPQSCTVR*ALSHMP
Trigger: GGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGA...CTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CAA 90 bp GCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAAGCGCTCTTCTCCTCTaGGAAGGAGGTGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: AVQPPRTDPTGAKPQVPESALLL*EGGAWG
Trigger: TCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCT...TTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CAA 90 bp GGGTCTATGTCTGCATGCAGCCGAGGATTTCCATCACCCTGGCCATGGGGCTGTTCCCAGCTCCTCCACTaGCTTCTGCGGGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GSMSACSRGFPSPWPWGCSQLLH*LLRGLS
Trigger: GCTGAGGCCCCGCAGAAGCAAGTGGAGGAGCTGGGA...ACAGCCCCATGGCCAGGGTGATGGAAATCCTCGGCTGCATGCAGACATAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGGCTGAAGTGATTCCTTaGCGGGGGTCCCGAAATGCA +
Preference number: 5 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQAEVIP*RGSRNA
Trigger: TGCATTTCGGGACCCCCGCAAAGGAATCACTTCAGC...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp AACTTGGTGGACCAGCCTCAGGAACCCCGGGTCATGCCTGCACTTCCCACCTTCGAGCCCTCGTGTCCCTaGCAGAGGAAGAAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: NLVDQPQEPRVMPALPTFEPSCP*QRKKSV
Trigger: CACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTC...GAAGGTGGGAAGTGCAGGCATGACCCGGGGTTCCTGAGGCTGGTCCACCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556573.6
CDS-3UTR CAA 90 bp CCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGAGTCCCAGCGCTCTTCTCCTCTaGGAAGGAGGTGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PTFCWGHRQGALRTGKSPSALLL*EGGAWG
Trigger: TCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCT...GGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CAA 90 bp CGGAGACAGCCCAGTCCAGGGTGGGTCTATGTCTGCATGCAGCCGAGGATTTCCAAGGCCAGAGCCCCCTaGAGCTTCCAGAGCCTCGAT +
Preference number: 5 (lower is better)
Translates to: RRQPSPGWVYVCMQPRISKARAP*SFQSLD
Trigger: ATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT...GGAAATCCTCGGCTGCATGCAGACATAGACCCACCCTGGACTGGGCTGTCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp TCCAGCAGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SSSAAPKNRPNRGQASGSRLRSN*VDQPQE
Trigger: TTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACG...GGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS TCA 90 bp GGAAGTCGTGGCCGTTCTCGGACAGCGGGACCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGTAGCAGGCGCACTGAGCGAAAAGGA +
Preference number: 5 (lower is better)
Translates to: GSRGRSRTAGPPPRS*TGRPRSSRRTERKG
Trigger: TCCTTTTCGCTCAGTGCGCCTGCTACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGGTCCCGCTGTCCGAGAACGGCCACGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS CCA 90 bp TCCTCCTCTGGATGGGGGAGAGCTCAGCAAATGTCCAGCAGTAAATaGCCCCCTCCCAGCATTGCAAGCCTCCCTTCTTGCCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: SSSGWGRAQQMSSSK*PPPSIASLPSCPEP
Trigger: GGGCTCTGGGCAAGAAGGGAGGCTTGCAATGCTGGGAGGGGGCCATTTACTGCTGGACATTTGCTGAGCTCTCCCCCATCCAGAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGCCTGGGGTCCGGAATaGGACCTGAAGCCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: ATDVSPHACISANSVPQSAWGPE*DLKPAG
Trigger: GCCCGCTGGCTTCAGGTCCAATTCCGGACCCCAGGC...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CGCTCACCTCACTACACGTGGCGTCGAGGGGACACACGCAGGGCTGCATGTGGCGGCCAAACTGGGCAATaGCAAACTGATCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RSPHYTWRRGDTRRAACGGQTGQ*QTDRRR
Trigger: CCTTCTACGATCAGTTTGCAATTGCCCAGTTTGGCC...GCCACATGCAGCCCTGCGTGTGTCCCCTCGACGCCACGTGTAGTGAGGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CAA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCAGCGCTCTTCTCCTCTaGGAAGGAGGTGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPSALLL*EGGAWG
Trigger: TCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCT...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
CDS-3UTR CAA 90 bp GCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAAAGGCCAGAGCCCCCTaGAGCTTCCAGAGCCTCGAT +
Preference number: 5 (lower is better)
Translates to: ARTEAKASQKQLGGPASGKARAP*SFQSLD
Trigger: ATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT...TCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp GGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGAACCCAAGGCCAGAGCCCCCTaGAGCTTCCAGAGCCTCGAT +
Preference number: 5 (lower is better)
Translates to: GQKRRRLRSNLVDQPQEPKARAP*SFQSLD
Trigger: ATCGAGGCTCTGGAAGCTCAAGGGGGCTCTGGCCTT...GGGTTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp AGTGCAGCCCCCAAGAACAGACCCAACCGGGGCCAAGCCTCAGGTTCCAGAAGCCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SAAPKNRPNRGQASGSRSRLRSN*VDQPQE
Trigger: TTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACG...GCTTCTGGAACCTGAGGCTTGGCCCCGGTTGGGTCTGTTCTTGGGGGCTGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS-3UTR CAA 90 bp GGAGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAACGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GATPPSAGDTDKELSGLERLRSN*VDQPQE
Trigger: TTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACG...TTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS GCA 90 bp GGGAGCTTCTGCAGCGCCAGCCCTCCGCGGGGACGTGTGTTACACTaGCTGACATGGGCAGGACCCTGGAGCTGCATTTGTAAGATAAAT +
Preference number: 5 (lower is better)
Translates to: GSFCSASPPRGRVLH*LTWAGPWSCICKIN
Trigger: ATTTATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCCCCGCGGAGGGCTGGCGCTGCAGAAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 90 bp AAAGACTTCGGGAGCCACCTGTACGGGCCTCACACAGGCCGACTCTaGGTCGTCAGTTCCTCATCAGCTCGAACGAAAGGAGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: KDFGSHLYGPHTGRL*VVSSSSARTKGDQE
Trigger: CTCCTGGTCTCCTTTCGTTCGAGCTGATGAGGAACTGACGACCCAGAGTCGGCCTGTGTGAGGCCCGTACAGGTGGCTCCCGAAGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGTCCTGCACCGTGAGGTaGGCGCTCAGCCACATGCCC +
Preference number: 5 (lower is better)
Translates to: SSPSGAHLQISRGKPNSRSCTVR*ALSHMP
Trigger: GGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGA...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCCCCCTCCGGCCCTCACGGGCCACTGATGTGTCCCCACATGCCTGCATTTCAGCACTGCCTGGTCCCATaGCTAACTACCTTATCCACA +
Preference number: 5 (lower is better)
Translates to: SPSGPHGPLMCPHMPAFQHCLVP*LTTLST
Trigger: TGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTG...CTGAAATGCAGGCATGTGGGGACACATCAGTGGCCCGTGAGGGCCGGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp AGCCACCCCACCTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTGGAAAGCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SHPTFCWGHRQGALRTGKRLRSN*VDQPQE
Trigger: TTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACG...CTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAGGTGGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS GCA 90 bp CATTGCAAGCCTCCCTTCTTGCCCAGAGCCCCCTACCTGGGCAATTaGAAACTGATCGTAGAAGGCGGAGTTGTCCACGCCCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: HCKPPFLPRAPYLGN*KLIVEGGVVHAQLQ
Trigger: TTGGAGCTGGGCGTGGACAACTCCGCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGCTTGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS GCA 90 bp CCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTaGCTCCTCCTCTGGATGGGGGAGAGCTCAGCAAATGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PLPGPIANYLIHTGA*LLLWMGESSANVQQ
Trigger: CTGCTGGACATTTGCTGAGCTCTCCCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 90 bp CCTCCGCGGGGACGTGTGTTACACTGCCTGACATGGGCAGGACCCTaGAGCTGCATTTGTAAGATAAATAATGGGTGTCCCGAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: PPRGRVLHCLTWAGP*SCICKINNGCPERL
Trigger: GAGGCGCTCGGGACACCCATTATTTATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCCCCGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp GACTGCACTCACACCTTAATCCAACTGGCACAAATTAGGCCTGAGGCCTCTTCCTCCTGCACCGTGAGGTaGGCGCTCAGCCACATGCCC +
Preference number: 5 (lower is better)
Translates to: DCTHTLIQLAQIRPEASSSCTVR*ALSHMP
Trigger: GGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGA...GGAAGAGGCCTCAGGCCTAATTTGTGCCAGTTGGATTAAGGTGTGAGTGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCCCAGACCCCAGGGCCTaGCCACTTCCTGATTCTAAC +
Preference number: 5 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASPDPRA*PLPDSN
Trigger: GTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTGG...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CCTCCTTCCTTGGACTCTGTATCAGCTTCCCCCTGGCTAGGGGACTCCTCTAAGCCCCTGCCTCCTTCCTaGGACTCTGTATCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PPSLDSVSASPWLGDSSKPLPPS*DSVSAS
Trigger: GGAAGCTGATACAGAGTCCAAGGAAGGAGGCAGGGG...CTTAGAGGAGTCCCCTAGCCAGGGGGAAGCTGATACAGAGTCCAAGGAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp AGCCAGGACAGAAGCGAAGGCGTCTCAGAAGCAACTTGGTGGACCAGCCTCAGGCGTCTCAGAAGCAACTaGGTGGACCAGCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SQDRSEGVSEATWWTSLRRLRSN*VDQPQE
Trigger: TTCCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACG...CCTGAGGCTGGTCCACCAAGTTGCTTCTGAGACGCCTTCGCTTCTGTCCTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
ENST00000625459.1
CDS CCA 90 bp TGCAGCGCCAGCCCTCCGCGGGGACGTGTGTTACACTGCCTGACATaGGCAGGACCCTGGAGCTGCATTTGTAAGATAAATAATGGGTGT +
Preference number: 5 (lower is better)
Translates to: CSASPPRGRVLHCLT*AGPWSCICKINNGC
Trigger: ACACCCATTATTTATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCCCCGCGGAGGGCTGGCGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 90 bp TTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCTCCTCTGGATaGGGGAGAGCTCAGCAAATGTCCAGCAGTAAATGGCCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLTTLSTQEPASSSG*GRAQQMSSSKWPPP
Trigger: GGGAGGGGGCCATTTACTGCTGGACATTTGCTGAGCTCTCCCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGGGAGCCCTCGTGTCCCTaGCAGAGGAAGAAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: SSPSGAHLQISRGKPNSREPSCP*QRKKSV
Trigger: CACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTC...CCTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCACTGCCTGGTCCCATaGCTAACTACCTTATCCACA +
Preference number: 5 (lower is better)
Translates to: VSPHACISANSVPQSGGHHCLVP*LTTLST
Trigger: TGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTG...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGCAAAGTCCAAAGCCCTaGTCCCTACACTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: LISVWGTSADFKGQTQFQQSPKP*SLHWTP
Trigger: GGGGGTCCAGTGTAGGGACAAGGGCTTTGGACTTTG...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp GGGACGCAGCTTATACAAGGGCAGGGTGGCAAATCTGAATTCACAAGTGGGATCCCAGACCCCAGGGCCTaGCCACTTCCTGATTCTAAC +
Preference number: 5 (lower is better)
Translates to: GTQLIQGQGGKSEFTSGIPDPRA*PLPDSN
Trigger: GTTAGAATCAGGAAGTGGCAAGGCCCTGGGGTCTGG...GATCCCACTTGTGAATTCAGATTTGCCACCCTGCCCTTGTATAAGCTGCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp GCCACTGATGTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTCCCCTACCTGGGCAATaGCAAACTGATCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: ATDVSPHACISANSVPQSPLPGQ*QTDRRR
Trigger: CCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGG...ACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACACATCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TGCCTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCCCCTACCTGGGCAATaGCAAACTGATCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: CLISVWGTSADFKGQTQFPLPGQ*QTDRRR
Trigger: CCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGG...GAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TCCCACTGCCTGGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTGCCTCCTGCATGAAGGTGTCTTaGACAGGTCCAGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: SHCLVPLLTTLSTQEPASCMKVS*TGPVHL
Trigger: GAGATGAACTGGACCTGTCAAAGACACCTTCATGCA...GGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACCAGGCAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CCACACGCAGCCTCTGCCTGGATGGCAGAATTCATGCAGAATTCGTTCAGGGCTGGCCAAACTGGGCAATaGCAAACTGATCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: PHAASAWMAEFMQNSFRAGQTGQ*QTDRRR
Trigger: CCTTCTACGATCAGTTTGCAATTGCCCAGTTTGGCC...AGCCCTGAACGAATTCTGCATGAATTCTGCCATCCAGGCAGAGGCTGCGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556573.6
ENST00000630378.2
CDS-3UTR CAA 90 bp GTGTCCCCACATGCCTGCATTTCAGCAAATAGCGTCCCTCAGAGTGGGGGCCACCTCATTAAGACATCTTaGCTGAGATGGAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: VSPHACISANSVPQSGGHLIKTS*LRWKSL
Trigger: CAGCGATTTCCATCTCAGCAAAGATGTCTTAATGAG...GTGGCCCCCACTCTGAGGGACGCTATTTGCTGAAATGCAGGCATGTGGGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp CTCATCTCCGTCTGGGGCACATCTGCAGATTTCAAGGGGCAAACCCAATTCCAGTGCATGAAGGTGTCTTaGACAGGTCCAGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: LISVWGTSADFKGQTQFQCMKVS*TGPVHL
Trigger: GAGATGAACTGGACCTGTCAAAGACACCTTCATGCA...CTGGAATTGGGTTTGCCCCTTGAAATCTGCAGATGTGCCCCAGACGGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS-3UTR CAA 90 bp TACTTTCAGTTTAGCCAGAGTGGAATTAGAACAGGGATATCATTAACAGCCAGCTCGATCCCCCTGGACTaGACACCCCCGATGGGCACC +
Preference number: 5 (lower is better)
Translates to: YFQFSQSGIRTGISLTASSIPLD*TPPMGT
Trigger: GGTGCCCATCGGGGGTGTCAAGTCCAGGGGGATCGA...GCTGGCTGTTAATGATATCCCTGTTCTAATTCCACTCTGGCTAAACTGAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556573.6
ENST00000616017.1
ENST00000620158.1
CDS-3UTR CAA 90 bp TGCATGAAGGTGTCTTTGACAGGTCCAGTTCATCTCGGCAAAGAGCATTCAGGCCTCATTAAGACATCTTaGCTGAGATGGAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: CMKVSLTGPVHLGKEHSGLIKTS*LRWKSL
Trigger: CAGCGATTTCCATCTCAGCAAAGATGTCTTAATGAG...GCCTGAATGCTCTTTGCCGAGATGAACTGGACCTGTCAAAGACACCTTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS TCA 90 bp CTAGTTGCCTTTAAGACTAAGTCACCTTTAGTCCAATTCCCAGAGTaGGGAAGCCTTAACATTGCTCCTCCTGGTTTAAAATTCCATCAG +
Preference number: 5 (lower is better)
Translates to: LVAFKTKSPLVQFPE*GSLNIAPPGLKFHQ
Trigger: CTGATGGAATTTTAAACCAGGAGGAGCAATGTTAAGGCTTCCTCACTCTGGGAATTGGACTAAAGGTGACTTAGTCTTAAAGGCAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS GCA 72 bp AGGCTGAAGCGGCAGGCGGCCGGCGGGCCCCACTCCTaGACCGTGAAGCGCTCGCGCTCCTGCACCGTGAGG +
Preference number: 6 (lower is better)
Translates to: RLKRQAAGGPHS*TVKRSRSCTVR
Trigger: CCTCACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCCGGCCGCCTGCCGCTTCAGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS GCA 72 bp CCAGGTGTGGGCAGGAGGGGGTGGACCGGGAGCTTCTaGAGCGCCAGCCCTCCGCGGGGACGTGTGTTACAC +
Preference number: 6 (lower is better)
Translates to: PGVGRRGWTGSF*SASPPRGRVLH
Trigger: GTGTAACACACGTCCCCGCGGAGGGCTGGCGCTGCAGAAGCTCCCGGTCCACCCCCTCCTGCCCACACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS GCA 72 bp GGGCCCCACTCCTGCACCGTGAAGCGCTCGCGCTCCTaGACCGTGAGGTTGGCGCTCAGCCACATGCCCTCG +
Preference number: 6 (lower is better)
Translates to: GPHSCTVKRSRS*TVRLALSHMPS
Trigger: CGAGGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS CAA 90 bp CCCCACTCCTGCACCGTGAAGCGCTCGCGCTCCTGCACCGTGAGGTaGGCGCTCAGCCACATGCCCTCGGTGAAGAGCAGGCAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: PHSCTVKRSRSCTVR*ALSHMPSVKSRQRP
Trigger: CGGCCGCTGCCTGCTCTTCACCGAGGGCATGTGGCTGAGCGCCAACCTCACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS GCA 72 bp TGTCCCTTGCAGAGGAAGAAGAGCGTGCGCCAGGCGTaGGCGGCGGCCAGCAGCAGAGACAGGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CPLQRKKSVRQA*AAASSRDRRLA
Trigger: CGCCAGCCTCCTGTCTCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCTCTTCTTCCTCTGCAAGGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS CCA 72 bp CCCTCGGTGAAGAGCAGGCAGCGGCCGCGGAAGTCGTaGCCGTTCTCGGACAGCGGGACCACCACCACGAAG +
Preference number: 6 (lower is better)
Translates to: PSVKSRQRPRKS*PFSDSGTTTTK
Trigger: CTTCGTGGTGGTGGTCCCGCTGTCCGAGAACGGCCACGACTTCCGCGGCCGCTGCCTGCTCTTCACCGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS GCA 72 bp AGGAGCCCTCGTGTCCCTTGCAGAGGAAGAAGAGCGTaGGCCAGGCGTGCGCGGCGGCCAGCAGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: RSPRVPCRGRRA*ARRARRPAAET
Trigger: TGTCTCTGCTGCTGGCCGCCGCGCACGCCTGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS TCA 72 bp AGAAGTAGCAGGCGCACTGAGCGAAAAGGAAATTGTTaGGCGCCATGGCCGGCCCGGGCGAGAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RSSRRTERKGNC*APWPARARAAA
Trigger: CGCCGCCGCTCTCGCCCGGGCCGGCCATGGCGCTCAACAATTTCCTTTTCGCTCAGTGCGCCTGCTACTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341595.7
ENST00000556573.6
ENST00000625335.2
ENST00000630378.2
CDS GCA 72 bp TCAGGAAGGCGGAGAAGAAGGAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGCGCCAGGCGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: SGRRRRRSPRVP*RGRRACARRAR
Trigger: CCGCGCACGCCTGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCTTCTTCTCCGCCTTCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS CAA 90 bp CTCCCCCTGCCTGCACTGTGCCTAAATGACAGCGCTCTTCTCCTCTaGGAAGGAGGTGCGTGGGGACGGCCGGGCCAGCAGCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LPLPALCLNDSALLL*EGGAWGRPGQQQLL
Trigger: AAGGAGCTGCTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCTGTCATTTAGGCACAGTGCAGGCAGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
ENST00000630378.2
CDS CCA 72 bp GCCTGCGGGAGATGCGGGAATTTTACCAGGTCGGCCTaGAGGGACCGACCCTGTGCCGCTAAAGACTTCGGG +
Preference number: 6 (lower is better)
Translates to: ACGRCGNFTRSA*RDRPCAAKDFG
Trigger: CCCGAAGTCTTTAGCGGCACAGGGTCGGTCCCTCCAGGCCGACCTGGTAAAATTCCCGCATCTCCCGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 72 bp AATGACAGCGCTCTTCTCCTCTTGGAAGGAGGTGCGTaGGGACGGCCGGGCCAGCAGCAGCTCCTTCTCGTG +
Preference number: 6 (lower is better)
Translates to: NDSALLLLEGGA*GRPGQQQLLLV
Trigger: CACGAGAAGGAGCTGCTGCTGGCCCGGCCGTCCCCACGCACCTCCTTCCAAGAGGAGAAGAGCGCTGTCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000556320.1
ENST00000556573.6
ENST00000625459.1
ENST00000630378.2
CDS TCA 72 bp GCGCCAGCCCTCCGCGGGGACGTGTGTTACACTGCCTaGCATGGGCAGGACCCTGGAGCTGCATTTGTAAGA +
Preference number: 6 (lower is better)
Translates to: APALRGDVCYTA*HGQDPGAAFVR
Trigger: TCTTACAAATGCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCCCCGCGGAGGGCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS TCA 72 bp GGCCGTTCTCGGACAGCGGGACCACCACCACGAAGCTaGACAGGAAGGCCAAGAAGTAGCAGGCGCACTGAG +
Preference number: 6 (lower is better)
Translates to: GRSRTAGPPPRS*TGRPRSSRRTE
Trigger: CTCAGTGCGCCTGCTACTTCTTGGCCTTCCTGTTCAGCTTCGTGGTGGTGGTCCCGCTGTCCGAGAACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341595.7
ENST00000415614.6
ENST00000556573.6
ENST00000615269.4
ENST00000615704.1
ENST00000621393.1
ENST00000625335.2
ENST00000630378.2
CDS CCA 72 bp GGGAGCCACCTGTACGGGCCTCACACAGGCCGACTCTaGGTCGTCAGTTCCTCATCAGCTCGAACGAAAGGA +
Preference number: 6 (lower is better)
Translates to: GSHLYGPHTGRL*VVSSSSARTKG
Trigger: TCCTTTCGTTCGAGCTGATGAGGAACTGACGACCCAGAGTCGGCCTGTGTGAGGCCCGTACAGGTGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS GCA 72 bp CCTCCCTTCTTGCCCAGAGCCCCCTACCTGGGCAATTaGAAACTGATCGTAGAAGGCGGAGTTGTCCACGCC +
Preference number: 6 (lower is better)
Translates to: PPFLPRAPYLGN*KLIVEGGVVHA
Trigger: GGCGTGGACAACTCCGCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGGGCTCTGGGCAAGAAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 72 bp CTTCTGCTGGGGACACAGACAAGGAGCTCTCCGGACTaGAAAGAGTCCCCATGTCCAGTGGGTCAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: LLLGTQTRSSPD*KESPCPVGQGS
Trigger: TGAGCCCTGACCCACTGGACATGGGGACTCTTTCCAGTCCGGAGAGCTCCTTGTCTGTGTCCCCAGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556320.1
ENST00000625459.1
CDS CAA 72 bp GCCTCCCTTCTTGCCCAGAGCCCCCTACCTGGGCAATaGCAAACTGATCGTAGAAGGCGGAGTTGTCCACGC +
Preference number: 6 (lower is better)
Translates to: ASLLAQSPLPGQ*QTDRRRRSCPR
Trigger: GCGTGGACAACTCCGCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CAA 90 bp GCATTGCAAGCCTCCCTTCTTGCCCAGAGCCCCCTACCTGGGCAATaGCAAACTGATCGTAGAAGGCGGAGTTGTCCACGCCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ALQASLLAQSPLPGQ*QTDRRRRSCPRPAP
Trigger: TGGAGCTGGGCGTGGACAACTCCGCCTTCTACGATCAGTTTGCAATTGCCCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGCTTGCAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CAA 90 bp GGAGAGCTCAGCAAATGTCCAGCAGTAAATGGCCCCCTCCCAGCATaGCAAGCCTCCCTTCTTGCCCAGAGCCCCCTACCTGGGCAATTG +
Preference number: 6 (lower is better)
Translates to: GELSKCPAVNGPLPA*QASLLAQSPLPGQL
Trigger: CAATTGCCCAGGTAGGGGGCTCTGGGCAAGAAGGGAGGCTTGCAATGCTGGGAGGGGGCCATTTACTGCTGGACATTTGCTGAGCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CAA 72 bp GGAGTGCGGTTTGCAGTCCAGGCTGAAGTGATTCCTTaGCGGGGGTCCCGAAATGCAATGTATGAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GVRFAVQAEVIP*RGSRNAMYEGR
Trigger: CCTCCCCTCATACATTGCATTTCGGGACCCCCGCAAAGGAATCACTTCAGCCTGGACTGCAAACCGCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS GCA 72 bp GGTCCCATTGCTAACTACCTTATCCACACAGGAGCCTaGCTCCTCCTCTGGATGGGGGAGAGCTCAGCAAAT +
Preference number: 6 (lower is better)
Translates to: GPIANYLIHTGA*LLLWMGESSAN
Trigger: ATTTGCTGAGCTCTCCCCCATCCAGAGGAGGAGGCAGGCTCCTGTGTGGATAAGGTAGTTAGCAATGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS CCA 72 bp AGCCCTCCGCGGGGACGTGTGTTACACTGCCTGACATaGGCAGGACCCTGGAGCTGCATTTGTAAGATAAAT +
Preference number: 6 (lower is better)
Translates to: SPPRGRVLHCLT*AGPWSCICKIN
Trigger: ATTTATCTTACAAATGCAGCTCCAGGGTCCTGCCCATGTCAGGCAGTGTAACACACGTCCCCGCGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2
CDS TCA 72 bp ATAGTGAGGTGTAGGAGTGCGGTTTGCAGTCCAGGCTaGAGTGATTCCTTTGCGGGGGTCCCGAAATGCAAT +
Preference number: 6 (lower is better)
Translates to: IVRCRSAVCSPG*SDSFAGVPKCN
Trigger: ATTGCATTTCGGGACCCCCGCAAAGGAATCACTTCAGCCTGGACTGCAAACCGCACTCCTACACCTCACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341595.7
ENST00000625335.2