RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM164 (Homo sapiens)

Ensembl gene IDs: ENSG00000157600

Ensembl transcript IDs: ENST00000288381.4, ENST00000372068.7, ENST00000372072.7, ENST00000372073.5, ENST00000461715.1, ENST00000464177.1, ENST00000471255.5, ENST00000497754.1

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTTCTGCCACTCCCTGAGCCACCTAGCTTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTGCACAGAGACCTGCTGACAACTTGC +
Preference number: 1 (lower is better)
Translates to: ALLPLPEPPSLPPGH*PAPIPVHRDLLTTC
Trigger: GCAAGTTGTCAGCAGGTCTCTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAAGCTAGGTGGCTCAGGGAGTGGCAGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CTTCAGCTGAGGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCCCCCAGGGGCTCCTCCCACAATCCC +
Preference number: 1 (lower is better)
Translates to: LQLRHRSSAGSNSKF*WRTDQAPRGSSHNP
Trigger: GGGATTGTGGGAGGAGCCCCTGGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTCAGCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp AGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGGGCTGGGTGGTaGTCTCACCTCCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTG +
Preference number: 1 (lower is better)
Translates to: RSPTLSMESSPWAGW*SHLPPQAASWREWL
Trigger: CAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGGAGGTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp CTCCCCAAGCCCTGGGGATTGATAGCCTCAATGCCCGCAGGCCTCTaGAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCACT +
Preference number: 1 (lower is better)
Translates to: LPKPWGLIASMPAGL*RRTVPPRVASYRST
Trigger: AGTGGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CTGGGTGTGCAAGCTCCAGCTTCTCCCTCACTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCACAGGGCAGATATGAGGGCTACCCT +
Preference number: 1 (lower is better)
Translates to: LGVQAPASPSLLYQS*GSRGPAQGRYEGYP
Trigger: AGGGTAGCCCTCATATCTGCCCTGTGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAGTGAGGGAGAAGCTGGAGCTTGCACACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp AGGAAAGCCCTGAGGAGGAGCTGGGAAGACAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTTCTCCCTCACTCCTGTACCAAAGCT +
Preference number: 1 (lower is better)
Translates to: RKALRRSWEDSPTGH*VCKLQLLPHSCTKA
Trigger: AGCTTTGGTACAGGAGTGAGGGAGAAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCTGTCTTCCCAGCTCCTCCTCAGGGCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CCTCTTCTACAAACACCCTCACACACGCGCAGAGCTCCCACACGCTaGCAAATGGCACACGGAAACCTGGCTGGGGAACTGGCTTGGCAC +
Preference number: 1 (lower is better)
Translates to: PLLQTPSHTRRAPTR*QMAHGNLAGELAWH
Trigger: GTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTGTGTGAGGGTGTTTGTAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp GGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAGGCCTCAGTCCCCCGTGGTAAGGGC +
Preference number: 1 (lower is better)
Translates to: GSVLTTSCEIPRLWA*RWYRNKASVPRGKG
Trigger: GCCCTTACCACGGGGGACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp ACAAGGCCTCAGTCCCCCGTGGTAAGGGCTGTGCTGGAGACTAAATaGGACGCCAGCATAAGCCTGGAGGTCCCTGGCAGTGGAGAAATG +
Preference number: 1 (lower is better)
Translates to: TRPQSPVVRAVLETK*DASISLEVPGSGEM
Trigger: CATTTCTCCACTGCCAGGGACCTCCAGGCTTATGCTGGCGTCCCATTTAGTCTCCAGCACAGCCCTTACCACGGGGGACTGAGGCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp GTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCAGTCCCCCGTGGTAAGGGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: VLTTSCEIPRLWACR*YRNKASVPRGKGCA
Trigger: AGCACAGCCCTTACCACGGGGGACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGAAACAAGGCCTCAGTCCCCCGTGGT +
Preference number: 1 (lower is better)
Translates to: LAGSVLTTSCEIPRL*ACRWYRNKASVPRG
Trigger: ACCACGGGGGACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp GATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAGGAGAAGGCCTACACAGTCACACCC +
Preference number: 1 (lower is better)
Translates to: DVNMGKARATRQPVP*HRNEEEEKAYTVTP
Trigger: GGGTGTGACTGTGTAGGCCTTCTCCTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CTCTCACCTCCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCATGGGACACCAGTGACCAGAATCTGG +
Preference number: 1 (lower is better)
Translates to: LSPPTPGSILEGVAG*LFTLSHGTPVTRIW
Trigger: CCAGATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGGAGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp GGTGCTCTCACCTCCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAGTCATGGGACACCAGTGACCAGAAT +
Preference number: 1 (lower is better)
Translates to: GALTSHPRQHPGGSG*LAVYFESWDTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGGAGGTGAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp TGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGGAGGAGGAGAAGGCCTACACAGTCA +
Preference number: 1 (lower is better)
Translates to: WRMSTWGRLEQPGNL*HATETRRRRRPTQS
Trigger: TGACTGTGTAGGCCTTCTCCTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp AGCAATGCCCAGCCACTTCCTGCCTGCTTGAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAAAAGCTCCTCCTTGTGGAGCACCTG +
Preference number: 1 (lower is better)
Translates to: SNAQPLPACLRSVHN*AEVLQQKLLLVEHL
Trigger: CAGGTGCTCCACAAGGAGGAGCTTTTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTGGGCATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp CACAGAAACGAGGAGGAGGAGAAGGCCTACACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTTCAGCTGAGGCACAGATCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: HRNEEEEKAYTVTPL*HSGASLQLRHRSSA
Trigger: AGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGTGTAGGCCTTCTCCTCCTCCTCGTTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp TTCCTGAGCCCAAATCAGCTCACTCTATATACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCTACCCGCCACAAAGCGGGCAGGATG +
Preference number: 1 (lower is better)
Translates to: FLSPNQLTLYTQKEG*LPVTDSTRHKAGRM
Trigger: CATCCTGCCCGCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCTGATTTGGGCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CAGCATCCTGGAGGGAGTGGCTGGTTGGCTGTTTACTTTGAGTCATaGGACACCAGTGACCAGAATCTGGCTGGTTCTGTCTTGACCACG +
Preference number: 1 (lower is better)
Translates to: QHPGGSGWLAVYFES*DTSDQNLAGSVLTT
Trigger: CGTGGTCAAGACAGAACCAGCCAGATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp TGTTTAGGGAGAGTACAAAGACTGGTTCTAAGGGAAGCCACTGTGTaGGGGTTCAGGGGAGACAGTGACGGGTCTGCCCAGTGCATAGCA +
Preference number: 1 (lower is better)
Translates to: CLGRVQRLVLREATV*GFRGDSDGSAQCIA
Trigger: TGCTATGCACTGGGCAGACCCGTCACTGTCTCCCCTGAACCCCCACACAGTGGCTTCCCTTAGAACCAGTCTTTGTACTCTCCCTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp GGAGTCAATGTGGAGTCAGCAATGCCCAGCCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAGCTGAAGTCCTTCAACAAAAGCTCC +
Preference number: 1 (lower is better)
Translates to: GVNVESAMPSHFLPA*GPCITELKSFNKSS
Trigger: GGAGCTTTTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACATTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CAGACTGTTCTTGGCCCACATCCCTGGCCAAGGCTACCTAGGGGCTaGAGGGAGTACTCTTTTCCCTTCCTAAGGCCATTTGAAAGGAAA +
Preference number: 1 (lower is better)
Translates to: QTVLGPHPWPRLPRG*REYSFPFLRPFERK
Trigger: TTTCCTTTCAAATGGCCTTAGGAAGGGAAAAGAGTACTCCCTCCAGCCCCTAGGTAGCCTTGGCCAGGGATGTGGGCCAAGAACAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp CCCTTTCTCCTCAACCAGCTGTTGTTAAAGCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAATCTCCCCATGTAAGGCCACTAGGA +
Preference number: 1 (lower is better)
Translates to: PFLLNQLLLKHRQAE*KSRSLQSPHVRPLG
Trigger: TCCTAGTGGCCTTACATGGGGAGATTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTGCTTTAACAACAGCTGGTTGAGGAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp AGGCCTTGTGTATTTCCTCATCAGCTATTCCTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATCCAGCCATTCAAGGAGCACCTTCCC +
Preference number: 1 (lower is better)
Translates to: RPCVFPHQLFLHVAV*RWAGPIQPFKEHLP
Trigger: GGGAAGGTGCTCCTTGAATGGCTGGATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGGAATAGCTGATGAGGAAATACACAAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp CTTCACTTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTGGGTGGTGCTCTCACCTCCCACCCC +
Preference number: 1 (lower is better)
Translates to: LHFGFVIAIDLQPSQ*NLALGLGGALTSHP
Trigger: GGGGTGGGAGGTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp GCACCGAAGCTCAGTGTAGGTCAAACACGGTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACTGTGTTGCCTAGAGTGGGACAGGGG +
Preference number: 1 (lower is better)
Translates to: APKLSVGQTRSNWKY*NWSRSTVLPRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTGACCTACACTGAGCTTCGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp ACTGAGCTGAAGTCCTTCAACAAAAGCTCCTCCTTGTGGAGCACCTaGACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTC +
Preference number: 1 (lower is better)
Translates to: TELKSFNKSSSLWST*TSTHEDLILWQPPF
Trigger: GAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGAGGAGCTTTTGTTGAAGGACTTCAGCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp GTTGCTTCTCTCCACGTTGGCTTGGCCCAAGATAAGAGTGAGATCTaGACCAGTTCAGATGCCTTATGCTCCCCAATGCCCCAAATACAG +
Preference number: 1 (lower is better)
Translates to: VASLHVGLAQDKSEI*TSSDALCSPMPQIQ
Trigger: CTGTATTTGGGGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAGATCTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 90 bp CACGGTCAAACTGGAAATACTGGAACTGGTCTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGAAGGGAGGCTCATCAGACAAAATCA +
Preference number: 1 (lower is better)
Translates to: HGQTGNTGTGLGQLC*LEWDRGREAHQTKS
Trigger: TGATTTTGTCTGATGAGCCTCCCTTCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp ACCACTGAGGCACCGAAGCTCAGTGTAGGTCAAACACGGTCAAACTaGAAATACTGGAACTGGTCTAGGTCAACTGTGTTGCCTAGAGTG +
Preference number: 1 (lower is better)
Translates to: TTEAPKLSVGQTRSN*KYWNWSRSTVLPRV
Trigger: CACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTGACCTACACTGAGCTTCGGTGCCTCAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp ATGTTACTGTTGTGCCTCTGGGAGGAAGATGGGCCAGATCATCTTTaGTGTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: MLLLCLWEEDGPDHL*CTKPNTEGREDQKQ
Trigger: CTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTACACCAAAGATGATCTGGCCCATCTTCCTCCCAGAGGCACAACAGTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp ACAGAGGACTCTGGGTCAACATCTACAAATCCAAGGAAGTCTTTTTaGCAGAGGGAAAAATGGCCCTTCTGCCACTCCCTGAGCCACCTA +
Preference number: 1 (lower is better)
Translates to: TEDSGSTSTNPRKSF*QREKWPFCHSLSHL
Trigger: TAGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCAAAAAGACTTCCTTGGATTTGTAGATGTTGACCCAGAGTCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp TACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGTCACGACTTGCTTCCTCAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: YTKHPTALSHDFIKN*VFSKSSHDLLPQGG
Trigger: TCCTCCCTGAGGAAGCAAGTCGTGACTTGACTTGGAGAACACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp GACAACTTGCTCTCTGTGGGGAGCTGTGCCCACTTCATAGGACACTaGATTACCAATGATCACAAATATAAAAACCTCAACAGAGGCTAC +
Preference number: 1 (lower is better)
Translates to: DNLLSVGSCAHFIGH*ITNDHKYKNLNRGY
Trigger: GTAGCCTCTGTTGAGGTTTTTATATTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 90 bp ACAGGCAGAACTTACACAGGGTCTGGCCTAGTACTGTATATATCTTaGCCCTCTTCACTTTGGATTTGTCATTGCAATAGATCTCCAACC +
Preference number: 1 (lower is better)
Translates to: TGRTYTGSGLVLYIS*PSSLWICHCNRSPT
Trigger: GGTTGGAGATCTATTGCAATGACAAATCCAAAGTGAAGAGGGTCAAGATATATACAGTACTAGGCCAGACCCTGTGTAAGTTCTGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 90 bp TATGCATCAGTTCTCAACTCTCACAGGCAGAACTTACACAGGGTCTaGCCTAGTACTGTATATATCTTGACCCTCTTCACTTTGGATTTG +
Preference number: 1 (lower is better)
Translates to: YASVLNSHRQNLHRV*PSTVYILTLFTLDL
Trigger: CAAATCCAAAGTGAAGAGGGTCAAGATATATACAGTACTAGGCCAGACCCTGTGTAAGTTCTGCCTGTGAGAGTTGAGAACTGATGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGNSKFW*RTDQAP
Trigger: GGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCAGCTCATTCTTCCCTaGAGCTGCCTGAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSQLILP*SCLREG
Trigger: TCCCTCTCTCAGGCAGCTTCAGGGAAGAATGAGCTG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTGACAGGAAAGCCCTaGGGAGGAGCTGGGAAGACA +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELTGKP*GGAGKT
Trigger: TGTCTTCCCAGCTCCTCCTCAGGGCTTTCCTGTCAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACAACCAGGCAACCTGTaGCATGCCACAGAAACGAGG +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGQPGNL*HATETR
Trigger: CCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGATCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATC +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELHVAV*RWAGPI
Trigger: GATTGGCCCTGCCCACCGTCAAACTGCTACATGTAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGLDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGLWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAATGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCC +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEWLVLS*PRAVKS
Trigger: GGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCA...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTTCTTCCTTCCTCTaGCAGGTGGATCTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGTSSFL*QVDLSL
Trigger: CAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACCCAAAAGCCCTGCATaGCCCCTTTACTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGPKSPA*PLYFFL
Trigger: AAGGAAGAAGTAAAGGGGGCATGCAGGGCTTTTGGG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGAGAGTAAGAGCACTTaGTGCCCTCCCCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRESKST*CPPLLL
Trigger: GAGCAGGAGGGGAGGGCACCAAGTGCTCTTACTCTC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGGGCAGGATGGGCAGTaGGGGGAGCTCCTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPGQDGQ*GELLPS
Trigger: GCTGGGAAGGAGCTCCCCCCACTGCCCATCCTGCCC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp GCTCTCACCTCCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTGGTaGGCTGTTTACTTTGAGTCATGGGACACCAGTGACCAGAATCTG +
Preference number: 2 (lower is better)
Translates to: ALTSHPRQHPGGSGW*AVYFESWDTSDQNL
Trigger: CAGATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGGAGGTGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGERVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTTGGCCCACATCCCTaGCCAAGGCTACCTAGGGGC +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLGPHP*PRLPRG
Trigger: GCCCCTAGGTAGCCTTGGCCAGGGATGTGGGCCAAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp TTTGAGTCATGGGACACCAGTGACCAGAATCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATCCCTCGGCTCTGGGCTTGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: FESWDTSDQNLAGSV*TTSCEIPRLWACRW
Trigger: CCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTCACTGGTGTCCCATGACTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGATACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCC +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRWLVLS*PRAVKS
Trigger: GGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAAAAGTTTGGCCCTaGCTTCAAAGAGGGCCAAAA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRKVWP*LQRGPK
Trigger: TTTTGGCCCTCTTTGAAGGCAGGGCCAAACTTTTCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEEGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp ACCCCAGGCAGCATCCTGGAGGGAGTGGCTGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTGACCAGAATCTGGCTGGTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: TPGSILEGVAGWLFT*SHGTPVTRIWLVLS
Trigger: AGACAGAACCAGCCAGATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCTTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCATCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARASLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGAACTGGCTTGGCACTaGCAGGAAAGCCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGELAWH*QESPEE
Trigger: CTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCTGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 2 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp AAGGTGGGCTACCCTGTAAGGCAGGCTGCCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCTTGGCCCAAGATAAGAGTGAGATCT +
Preference number: 2 (lower is better)
Translates to: KVGYPVRQAAKSLVG*LLSTLAWPKIRVRS
Trigger: AGATCTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGGTAGCCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAATTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCTCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEERERQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACCCAGGGCACTGCCCTaGCCCAATACCAGTGCACAG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQPRALP*PNTSAQ
Trigger: CTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 2 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHLLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEERETWLGN*LGTDRK
Trigger: TTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCACACGGAAACCTGGCTaGGGAACTGGCTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPTRKPG*GTGLAL
Trigger: CAGTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGC +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHGRLSL*LQNPAC
Trigger: GCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCAGCTCATTCTTCCCTaGAGCTGCCTGAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTQLILP*SCLREG
Trigger: TCCCTCTCTCAGGCAGCTTCAGGGAAGAATGAGCTG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHSRNGP*CEDSPN
Trigger: GTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVRATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCCTGTAAGGCAGGCTaGCAAGAGTCTGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPCKAG*QESGWV
Trigger: AACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGTGGCTTCAGAACCCTaGATGCCTTCACAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPVASEP*MPSQAD
Trigger: GTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCAC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCTCTGTGGGGAGCTGTaGCCACTTCATAGGACACTG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPLCGEL*PLHRTL
Trigger: CAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEERELWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 2 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGENLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTGCCAAGAGTCTGGTTaGGTTGCTTCTCTCCACGTT +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVCQESG*VASLHV
Trigger: AACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGGCTACCTAGGGGCTaGAGGGAGTACTCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRLPRG*REYSFP
Trigger: GGGAAAAGAGTACTCCCTCCAGCCCCTAGGTAGCCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACACAACTTGCTCTCTGTaGGGAGCTGTGCCCACTTCA +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHTTCSL*GAVPTS
Trigger: TGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp GAGGCCTTGTGTATTTCCTCATCAGCTATTCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAATCCAGCCATTCAAGGAGCACCTTCC +
Preference number: 2 (lower is better)
Translates to: EALCISSSAIPTCSS*TVGRANPAIQGAPS
Trigger: GGAAGGTGCTCCTTGAATGGCTGGATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGGAATAGCTGATGAGGAAATACACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARATVTPL*HSGASL
Trigger: AAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVLPKAI*KETALF
Trigger: GAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEERERVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAG +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTPGGSG*LAVYFE
Trigger: CTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGAATCTTCCAGAAATaGGCCCTGATGCGAGGATTC +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRIFQK*ALMRGF
Trigger: GAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCTGGAGGATGTCAACATaGGGAAGGCTCGAGCAACCA +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPWRMST*GRLEQP
Trigger: TGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGGTGGATCTGTCTCTaGCTTGGCCATGCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFRWICL*LGHARH
Trigger: ATGCCTGGCATGGCCAAGCCAGAGACAGATCCACCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGTTTCTGAGCCAATCTaGCCCCCAAAAGCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPVSEPI*PPKALH
Trigger: ATGCAGGGCTTTTGGGGGCCAGATTGGCTCAGAAAC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAACACGGAAACCTGGCTaGGGAACTGGCTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQTRKPG*GTGLAL
Trigger: CAGTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp GACAGAGGACTCTGGGTCAACATCTACAAATCCAAGGAAGTCTTTTaGGCAGAGGGAAAAATGGCCCTTCTGCCACTCCCTGAGCCACCT +
Preference number: 2 (lower is better)
Translates to: DRGLWVNIYKSKEVF*AEGKMALLPLPEPP
Trigger: AGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCAAAAAGACTTCCTTGGATTTGTAGATGTTGACCCAGAGTCCTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGAAAAGTTTGGCCCTaGCTTCAAAGAGGGCCAAAA +
Preference number: 2 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRKVWP*LQRGPK
Trigger: TTTTGGCCCTCTTTGAAGGCAGGGCCAAACTTTTCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQRQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCCAAAAGCCCTGCATaGCCCCTTTACTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPKSPA*PLYFFL
Trigger: AAGGAAGAAGTAAAGGGGGCATGCAGGGCTTTTGGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGACCTGCTGACAACTTaGTCTCTGTGGGGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQDLLTT*SLWGAV
Trigger: CACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMLWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAAGAATCTTCCAGAAATaGGCCCTGATGCGAGGATTC +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGRIFQK*ALMRGF
Trigger: GAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACT +
Preference number: 2 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRSNWKY*NWSRST
Trigger: AGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTG +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGVKPID*APSILL
Trigger: CAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCAC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTGGGTCTCTGCTATTTaGAGTGGATGCCACAAGTTG +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHWVSAI*SGCHKL
Trigger: CAACTTGTGGCATCCACTCCAAATAGCAGAGACCCA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARALAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACAGCTCATTCTTCCCTaGAGCTGCCTGAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPQLILP*SCLREG
Trigger: TCCCTCTCTCAGGCAGCTTCAGGGAAGAATGAGCTG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAACATGTTACTGTTGTaGCTCTGGGAGGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPNMLLL*LWEEDG
Trigger: CCCATCTTCCTCCCAGAGGCACAACAGTAACATGTT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTEGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGATAAGAGTGAGATCTaGACCAGTTCAGATGCCTTA +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVDKSEI*TSSDAL
Trigger: TAAGGCATCTGAACTGGTCCAGATCTCACTCTTATC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETHRQAE*KSRSLQ
Trigger: TTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCATTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 2 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 2 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAATGCGATGAAGTTTaGGGAGAGAGAGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPECDEV*GEREKE
Trigger: CTCTTTCTCTCTCTCTCCTCAAACTTCATCGCATTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGAATCTTCCAGAAATaGGCCCTGATGCGAGGATTC +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFRIFQK*ALMRGF
Trigger: GAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAATGCCAAGAGTCTGGTTaGGTTGCTTCTCTCCACGTT +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQCQESG*VASLHV
Trigger: AACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCA...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 2 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGAGAAAGAGATTGCTaGCTTGGGGAGACTGAGTCT +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQRERDC*LGETES
Trigger: AGACTCAGTCTCCCCAAGTCAGCAATCTCTTTCTCT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp CTGGAGGTCCCTGGCAGTGGAGAAATGAAACACAACCCAATCTCATaGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCCCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LEVPGSGEMKHNPIS*LRCQKNYYLLFPFS
Trigger: GGAGAAAGGGAACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 90 bp CTTCCAACTTCTCCTTTTGTAAAGAGGCCAAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCTATTCCTACATGTAGCAGTTTGACG +
Preference number: 2 (lower is better)
Translates to: LPTSPFVKRPRGTEA*CISSSAIPTCSSLT
Trigger: CGTCAAACTGCTACATGTAGGAATAGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTCTTTACAAAAGGAGAAGTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 2 (lower is better)
Translates to: PATLQAASMNAMKFEEREVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCACTTCATAGGACACTaGATTACCAATGATCACAAA +
Preference number: 2 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHHFIGH*ITNDHK
Trigger: TTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGTTCAGATGCCTTATaGTCCCCAATGCCCCAAATA +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQSSDAL*SPMPQI
Trigger: TATTTGGGGCATTGGGGAGCATAAGGCATCTGAACT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPEGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCGTAGGGGGAAGAGCTaGGAAAGGAAGAGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRRGKS*ERKSGR
Trigger: TCTACCACTCTTCCTTTCCCAGCTCTTCCCCCTACG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAATGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACATACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACTTTGGATTTGTCATTaGAATAGATCTCCAACCCTC +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQLWICH*NRSPTL
Trigger: GAGGGTTGGAGATCTATTGCAATGACAAATCCAAAG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTTTGGATTTGTCATTaGAATAGATCTCCAACCCTC +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLWICH*NRSPTL
Trigger: GAGGGTTGGAGATCTATTGCAATGACAAATCCAAAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: VETSKKILFRRGQRTLGQDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 2 (lower is better)
Translates to: QNLPEMGPDARILQTQKPVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAACAACCCAATCTCATTaGTTCGATGCCAAAAGAACT +
Preference number: 2 (lower is better)
Translates to: NNSALSVDTLKKSGPRETTTQSH*FDAKRT
Trigger: AGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp CCACTCCCTGAGCCACCTAGCTTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTGCACAGAGACCTGCTG +
Preference number: 3 (lower is better)
Translates to: PLPEPPSLPPGH*PAPIPVHRDLL
Trigger: CAGCAGGTCTCTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAAGCTAGGTGGCTCAGGGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCCAGGGGCTCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: HRSSAGSNSKFW*RTDQAPRGSSH
Trigger: GTGGGAGGAGCCCCTGGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp AGGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCCCCCAGGGGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: RHRSSAGSNSKF*WRTDQAPRGSS
Trigger: GGAGGAGCCCCTGGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CCTCACACACGCGCAGAGCTCCCACACGCTGGCAAATaGCACACGGAAACCTGGCTGGGGAACTGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: PHTRAELPHAGK*HTETWLGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTGTGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp ACCCTCTCAATGGAATCTAGCCCTTGGGCTGGGTGGTaGTCTCACCTCCCACCCCAGGCAGCATCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: TLSMESSPWAGW*SHLPPQAASWR
Trigger: CCTCCAGGATGCTGCCTGGGGTGGGAGGTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCATTGAGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp CCAGCCTGGGGCCTTGCCAAGGAGCCCACAAGGGCCTaGAGGAGACCCTCCATAATCAGCGTCAGTGTCTTG +
Preference number: 3 (lower is better)
Translates to: PAWGLAKEPTRA*RRPSIISVSVL
Trigger: CAAGACACTGACGCTGATTATGGAGGGTCTCCTGCAGGCCCTTGTGGGCTCCTTGGCAAGGCCCCAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CAGTCCCCCGTGGTAAGGGCTGTGCTGGAGACTAAATaGGACGCCAGCATAAGCCTGGAGGTCCCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: QSPVVRAVLETK*DASISLEVPGS
Trigger: ACTGCCAGGGACCTCCAGGCTTATGCTGGCGTCCCATTTAGTCTCCAGCACAGCCCTTACCACGGGGGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAAGCCCTGAGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: AGKWHTETWLGN*LGTDRKALRRS
Trigger: GCTCCTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CAAACACCCTCACACACGCGCAGAGCTCCCACACGCTaGCAAATGGCACACGGAAACCTGGCTGGGGAACTG +
Preference number: 3 (lower is better)
Translates to: QTPSHTRRAPTR*QMAHGNLAGEL
Trigger: CAGTTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTGTGTGAGGGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCATGGGACACCAGTGACC +
Preference number: 3 (lower is better)
Translates to: PTPGSILEGVAG*LFTLSHGTPVT
Trigger: GGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CAAGCTCCAGCTTCTCCCTCACTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCACAGGGCAGATATGAG +
Preference number: 3 (lower is better)
Translates to: QAPASPSLLYQS*GSRGPAQGRYE
Trigger: CTCATATCTGCCCTGTGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAGTGAGGGAGAAGCTGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 3 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCGGTCCCTCCCAGGGTaGCTTCCTATAGGTCCACTT +
Preference number: 3 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRSLPG*LPIGPL
Trigger: AAGTGGACCTATAGGAAGCAACCCTGGGAGGGACCG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCCCAAGCCCTGGGGATaGATAGCCTCAATGCCCGCA +
Preference number: 3 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMPKPWG*IASMPA
Trigger: TGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAGCAAAGGCAAGCTaGTGGAGGATGTCAACATGG +
Preference number: 3 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRAKAS*WRMSTW
Trigger: CCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 3 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGAPSIL*TYMFLS
Trigger: GCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp TTGACCACGAGCTGTGAAATCCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAGGCCTCAGTCCCCCGT +
Preference number: 3 (lower is better)
Translates to: LTTSCEIPRLWA*RWYRNKASVPR
Trigger: ACGGGGGACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp ATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAGGAGAAGGCCTACACA +
Preference number: 3 (lower is better)
Translates to: MGKARATRQPVP*HRNEEEEKAYT
Trigger: TGTGTAGGCCTTCTCCTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp TCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGGAGGAGGAGAAGGCCT +
Preference number: 3 (lower is better)
Translates to: STWGRLEQPGNL*HATETRRRRRP
Trigger: AGGCCTTCTCCTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp ACGAGCTGTGAAATCCCTCGGCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCAGTCCCCCGTGGTAAG +
Preference number: 3 (lower is better)
Translates to: TSCEIPRLWACR*YRNKASVPRGK
Trigger: CTTACCACGGGGGACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp ACCTCCCACCCCAGGCAGCATCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAGTCATGGGACACCAGT +
Preference number: 3 (lower is better)
Translates to: TSHPRQHPGGSG*LAVYFESWDTS
Trigger: ACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGCTGCCTGGGGTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 3 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEAPSIL*TYMFLS
Trigger: GCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp GGGACACCAGTGACCAGAATCTGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCCCTCGGCTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: GTPVTRIWLVLS*PRAVKSLGSGL
Trigger: AAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTCACTGGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp AGAGTACAAAGACTGGTTCTAAGGGAAGCCACTGTGTaGGGGTTCAGGGGAGACAGTGACGGGTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: RVQRLVLREATV*GFRGDSDGSAQ
Trigger: CTGGGCAGACCCGTCACTGTCTCCCCTGAACCCCCACACAGTGGCTTCCCTTAGAACCAGTCTTTGTACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 3 (lower is better)
Translates to: SKGKLVEDVNMGKARATRSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCCAAGCCCTGGGGATaGATAGCCTCAATGCCCGCA +
Preference number: 3 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPKPWG*IASMPA
Trigger: TGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp GTGGAGTCAGCAATGCCCAGCCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAGCTGAAGTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: VESAMPSHFLPA*GPCITELKSFN
Trigger: GTTGAAGGACTTCAGCTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTGGGCATTGCTGACTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp GAGGAGGAGGAGAAGGCCTACACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTTCAGCTGAGGCACAGA +
Preference number: 3 (lower is better)
Translates to: EEEEKAYTVTPL*HSGASLQLRHR
Trigger: TCTGTGCCTCAGCTGAAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGTGTAGGCCTTCTCCTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp CCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTGGAGTGGATGCCACAA +
Preference number: 3 (lower is better)
Translates to: PNTEGREDQKQA*LGLCYLEWMPQ
Trigger: TTGTGGCATCCACTCCAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp TCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGAAACAAGGCCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SVLTTSCEIPRL*ACRWYRNKASV
Trigger: GACTGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGGATCTGTCTCTGGCTaGGCCATGCCAGGCATGTGG +
Preference number: 3 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFGSVSG*AMPGMW
Trigger: CCACATGCCTGGCATGGCCAAGCCAGAGACAGATCC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTCTCTCCACGTTGGCTaGGCCCAAGATAAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVSLHVG*AQDKSE
Trigger: CTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 3 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp GTCTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTaGCAGAGGAACATGTTACTGTTGTGCCTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: VCGFRTLHAFTG*QRNMLLLCLWE
Trigger: CTCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GGAGGGAGTGGCTGGTTGGCTGTTTACTTTGAGTCATaGGACACCAGTGACCAGAATCTGGCTGGTTCTGTC +
Preference number: 3 (lower is better)
Translates to: GGSGWLAVYFES*DTSDQNLAGSV
Trigger: GACAGAACCAGCCAGATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCACAACCCAATCTCATaGCTTCGATGCCAAAAGAAC +
Preference number: 3 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRHNPIS*LRCQKN
Trigger: GTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 3 (lower is better)
Translates to: PATLQAASMNAMKFEERELAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 3 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACCCAAGCCCTGGGGATaGATAGCCTCAATGCCCGCA +
Preference number: 3 (lower is better)
Translates to: VETSKKILFRRGQRTLGQPKPWG*IASMPA
Trigger: TGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 3 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATCTCTCCACGTTGGCTaGGCCCAAGATAAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGSLHVG*AQDKSE
Trigger: CTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 3 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp CAGCCACTTCCTGCCTGCTTGAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAAAAGCTCCTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: QPLPACLRSVHN*AEVLQQKLLLV
Trigger: CACAAGGAGGAGCTTTTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp ACTGGAAATACTGGAACTGGTCTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGAAGGGAGGCTCATCAG +
Preference number: 3 (lower is better)
Translates to: TGNTGTGLGQLC*LEWDRGREAHQ
Trigger: CTGATGAGCCTCCCTTCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR GCA 72 bp CCAAATCAGCTCACTCTATATACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCTACCCGCCACAAAGCG +
Preference number: 3 (lower is better)
Translates to: PNQLTLYTQKEG*LPVTDSTRHKA
Trigger: CGCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCTGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GAGAAAGAGATTGCTGACTTGGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGCCTTCACAGGCTGACA +
Preference number: 3 (lower is better)
Translates to: EKEIADLGRLSL*LQNPACLHRLT
Trigger: TGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCCCAAGTCAGCAATCTCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACGGTCCCTCCCAGGGTaGCTTCCTATAGGTCCACTT +
Preference number: 3 (lower is better)
Translates to: VETSKKILFRRGQRTLGQRSLPG*LPIGPL
Trigger: AAGTGGACCTATAGGAAGCAACCCTGGGAGGGACCG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGAGCAAAGGCAAGCTaGTGGAGGATGTCAACATGG +
Preference number: 3 (lower is better)
Translates to: PATLQAASMNAMKFEERERAKAS*WRMSTW
Trigger: CCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 3 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 3 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 3 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFLAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 3 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 3 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTTTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 3 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTGGGTCTCTGCTATTaGGAGTGGATGCCACAAGTT +
Preference number: 3 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLGLCY*EWMPQV
Trigger: AACTTGTGGCATCCACTCCAAATAGCAGAGACCCAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp CTCAACCAGCTGTTGTTAAAGCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAATCTCCCCATGTAAGG +
Preference number: 3 (lower is better)
Translates to: LNQLLLKHRQAE*KSRSLQSPHVR
Trigger: CCTTACATGGGGAGATTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTGCTTTAACAACAGCTGGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTGGGTGGTGCTCTCACC +
Preference number: 3 (lower is better)
Translates to: GFVIAIDLQPSQ*NLALGLGGALT
Trigger: GGTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp TTACTTCTTCCTTCCTCTGACAGGTGGATCTGTCTCTaGCTTGGCCATGCCAGGCATGTGGCTTTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: LLLPSSDRWICL*LGHARHVAFAF
Trigger: GAAAGCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp TTGTGCCTCTGGGAGGAAGATGGGCCAGATCATCTTTaGTGTACAAAACCAAATACTGAGGGCAGGGAGGAC +
Preference number: 3 (lower is better)
Translates to: LCLWEEDGPDHL*CTKPNTEGRED
Trigger: GTCCTCCCTGCCCTCAGTATTTGGTTTTGTACACCAAAGATGATCTGGCCCATCTTCCTCCCAGAGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp GTATTTCCTCATCAGCTATTCCTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATCCAGCCATTCAAGGAG +
Preference number: 3 (lower is better)
Translates to: VFPHQLFLHVAV*RWAGPIQPFKE
Trigger: CTCCTTGAATGGCTGGATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGGAATAGCTGATGAGGAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCAAAAGAACTACTACTaGTTGTTCCCTTTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLQKNYY*LFPFSS
Trigger: TGAGGAGAAAGGGAACAACAAGTAGTAGTTCTTTTG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTGGGCCAGATCATCTTaGGTGTACAAAACCAAATAC +
Preference number: 3 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHWARSS*VYKTKY
Trigger: GTATTTGGTTTTGTACACCAAAGATGATCTGGCCCA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp CTGGAGGGAGTACTCTTTTCCCTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTCTACAAACACCCTCAC +
Preference number: 3 (lower is better)
Translates to: LEGVLFSLPKAI*KETALFYKHPH
Trigger: GTGAGGGTGTTTGTAGAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAGGGAAAAGAGTACTCCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GTAGGTCAAACACGGTCAAACTGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTGCCTAGAGTGGGACAG +
Preference number: 3 (lower is better)
Translates to: VGQTRSNWKYWN*SRSTVLPRVGQ
Trigger: CTGTCCCACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GCACCGAAGCTCAGTGTAGGTCAAACACGGTCAAACTaGAAATACTGGAACTGGTCTAGGTCAACTGTGTTG +
Preference number: 3 (lower is better)
Translates to: APKLSVGQTRSN*KYWNWSRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTGACCTACACTGAGCTTCGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGGAACATGTTACTGTaGTGCCTCTGGGAGGAAGAT +
Preference number: 3 (lower is better)
Translates to: VETSKKILFRRGQRTLGQRNMLL*CLWEED
Trigger: ATCTTCCTCCCAGAGGCACAACAGTAACATGTTCCT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAGTACTGTATATATCTaGACCCTCTTCACTTTGGAT +
Preference number: 3 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHSTVYI*TLFTLD
Trigger: ATCCAAAGTGAAGAGGGTCAAGATATATACAGTACT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp TCCAACTTCTCCTTTTGTAAAGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTCATCAGCTATTCCTAC +
Preference number: 3 (lower is better)
Translates to: SNFSFCKEAKGH*GLVYFLISYSY
Trigger: GTAGGAATAGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTCTTTACAAAAGGAGAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGTCACGACTTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: HPTALSHDFIKN*VFSKSSHDLLP
Trigger: AGGAAGCAAGTCGTGACTTGACTTGGAGAACACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp CTCAGTGTAGGTCAAACACGGTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACTGTGTTGCCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: LSVGQTRSNWKY*NWSRSTVLPRV
Trigger: CACTCTAGGCAACACAGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTGACCTACACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp AAATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTGACCTACATGTTTCTG +
Preference number: 3 (lower is better)
Translates to: KYRPWLLVKPID*APSILLTYMFL
Trigger: CAGAAACATGTAGGTCAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 3 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALLAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp TGTCACAGACGAGAGCAACAAGCGACTAGGTTTTCCTaGGCCCAAATCAGCTCACTCTATATACACAAAAGG +
Preference number: 3 (lower is better)
Translates to: CHRREQQATRFS*AQISSLYIHKR
Trigger: CCTTTTGTGTATATAGAGTGAGCTGATTTGGGCTCAGGAAAACCTAGTCGCTTGTTGCTCTCGTCTGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CCA 72 bp GTTCTCAACTCTCACAGGCAGAACTTACACAGGGTCTaGCCTAGTACTGTATATATCTTGACCCTCTTCACT +
Preference number: 3 (lower is better)
Translates to: VLNSHRQNLHRV*PSTVYILTLFT
Trigger: AGTGAAGAGGGTCAAGATATATACAGTACTAGGCCAGACCCTGTGTAAGTTCTGCCTGTGAGAGTTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR-3UTR CAA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGTACTGTATATATCTaGACCCTCTTCACTTTGGAT +
Preference number: 3 (lower is better)
Translates to: VETSKKILFRRGQRTLGQSTVYI*TLFTLD
Trigger: ATCCAAAGTGAAGAGGGTCAAGATATATACAGTACT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp AGAAACAGATCTACAGAATCTTCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAACTCAAAAACCAACCAA +
Preference number: 3 (lower is better)
Translates to: RNRSTESSRNGP*CEDSPNSKTNQ
Trigger: TTGGTTGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTGTAGATCTGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp CTCTCTGTGGGGAGCTGTGCCCACTTCATAGGACACTaGATTACCAATGATCACAAATATAAAAACCTCAAC +
Preference number: 3 (lower is better)
Translates to: LSVGSCAHFIGH*ITNDHKYKNLN
Trigger: GTTGAGGTTTTTATATTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR TCA 72 bp AAAGAAATACACCAAACATCCTACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGTGTTCTCCAAGTCAAG +
Preference number: 3 (lower is better)
Translates to: KEIHQTSYCPLP*FYQELGVLQVK
Trigger: CTTGACTTGGAGAACACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACCTTCCTCTGGCCGCTaGGTCACCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGPSSGR*VTCSGW
Trigger: CCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGTCCCGAGGCCCAGATaGGATACCAGGGGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSVPRPR*DTRGRR
Trigger: TCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGAC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCCGGATCGGGCTACTaGTCCGCTCCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPGSGY*SAPALS
Trigger: GGAGAGCGCGGGAGCGGAGCAGTAGCCCGATCCGGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372072.7
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTACTCCTGCAACCGCGTaGCCGTCTCTGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRATPATA*PSLPPA
Trigger: AGCTGGGGGCAGAGACGGCCACGCGGTTGCAGGAGT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCCTTCCTCTGGCCGCTaGGTCACCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAPSSGR*VTCSGW
Trigger: CCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACTGCCTCCCTGTCACTaGCTCTACCCGCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGLPPCH*LYPPQS
Trigger: GCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACCCAGGGCACTGCCCTaGCCCAATACCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEPRALP*PNTSAQ
Trigger: CTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGACGGGTCTGCCCAGTaGATAGCAATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGDGSAQ*IAIPAG
Trigger: CCCAGCTGGGATTGCTATGCACTGGGCAGACCCGTC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTCCTTGCCTTCCTCTaGCCGCTGGGTCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELLAFL*PLGHLL
Trigger: GAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTCCTTGCCTTCCTCTaGCCGCTGGGTCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALLAFL*PLGHLL
Trigger: GAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGLLYQS*GSRGPA
Trigger: TGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCTGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTTGGCCCACATCCCTaGCCAAGGCTACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALGPHP*PRLPRG
Trigger: GCCCCTAGGTAGCCTTGGCCAGGGATGTGGGCCAAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGAACTGGCTTGGCACTaGCAGGAAAGCCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSELAWH*QESPEE
Trigger: CTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTGCCTCCCTGTCACTaGCTCTACCCGCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELPPCH*LYPPQS
Trigger: GCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAATCCAGCAGCCGCTGCTaGCAAGAGAGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGESSSRC*QERKAA
Trigger: TGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGA...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCTGCTCTGGCTGGCTaGCAGGGCTACCCCTACCGT +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPALAG*QGYPYR
Trigger: ACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCCTGCTCTGGCTGGCTaGCAGGGCTACCCCTACCGT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRPALAG*QGYPYR
Trigger: ACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCCGCGTGGCCGTCTCTaGCCCCAGCTAGCAACTTCG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRPRGRL*PQLATS
Trigger: CGAAGTTGCTAGCTGGGGGCAGAGACGGCCACGCGG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCCGCGCTTCTCCAGTaGCCACCAACGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPALLQ*PPTRQG
Trigger: ACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCTTCCTCTGGCCGCTaGGTCACCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPSSGR*VTCSGW
Trigger: CCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAATGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACCACACGCTGGCAAATaGCACACGGAAACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGPHAGK*HTETWL
Trigger: CAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLHVAV*RWAGPI
Trigger: GATTGGCCCTGCCCACCGTCAAACTGCTACATGTAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTCTGTGGGGAGCTGTaGCCACTTCATAGGACACTG +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLCGEL*PLHRTL
Trigger: CAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGACCTGCTGACAACTTaGTCTCTGTGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGDLLTT*SLWGAV
Trigger: CACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGGGCAGGATGGGCAGTaGGGGGAGCTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRGQDGQ*GELLPS
Trigger: GCTGGGAAGGAGCTCCCCCCACTGCCCATCCTGCCC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGGGCAGGATGGGCAGTaGGGGGAGCTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLGQDGQ*GELLPS
Trigger: GCTGGGAAGGAGCTCCCCCCACTGCCCATCCTGCCC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAGPSHV*EQDDQL
Trigger: AAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTTGCACAGAGACCTGCTaGCAACTTGCTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRACTETC*QLALCG
Trigger: CCCACAGAGAGCAAGTTGTCAGCAGGTCTCTGTGCA...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTGCCTCCCTGTCACTaGCTCTACCCGCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLPPCH*LYPPQS
Trigger: GCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGTCCCGAGGCCCAGATaGGATACCAGGGGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMVPRPR*DTRGRR
Trigger: TCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGAC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAQPGNL*HATETR
Trigger: CCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGCTATTTGGAGTGGATaGCACAAGTTGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSAIWSG*HKLASS
Trigger: GGAGCTGGCCAACTTGTGGCATCCACTCCAAATAGC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGTGGCTTCAGAACCCTaGATGCCTTCACAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEVASEP*MPSQAD
Trigger: GTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCAC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGACGGGACATGATGCAGTaGTTCCCCTTGACCACAGTA +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRDMMQ*FPLTTV
Trigger: TACTGTGGTCAAGGGGAACCACTGCATCATGTCCCG...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGTCACCTGCTCTGGCTaGCTGCCAGGGCTACCCCTA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMVTCSG*LPGLPL
Trigger: TAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGAC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAATGGTCATGAGAGTCTaGTGTCCCGAGGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEMVMRV*CPEAQM
Trigger: CATCTGGGCCTCGGGACACCAGACTCTCATGACCAT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCGTAGGGGGAAGAGCTaGGAAAGGAAGAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSRRGKS*ERKSGR
Trigger: TCTACCACTCTTCCTTTCCCAGCTCTTCCCCCTACG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGTTTCTGAGCCAATCTaGCCCCCAAAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGVSEPI*PPKALH
Trigger: ATGCAGGGCTTTTGGGGGCCAGATTGGCTCAGAAAC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLLYQS*GSRGPA
Trigger: TGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLLYQS*GSRGPA
Trigger: TGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTAGAGCTCCCACACGCTaGCAAATGGCACACGGAAAC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRARAPTR*QMAHGN
Trigger: GTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTTGGCAGAGGGAAAAATaGCCCTTCTGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAWQREK*PFCHSL
Trigger: CAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCA...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGTTGAAAGGAGCCGTTaGCCAATTCCTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAVERSR*PIPATA
Trigger: CGCGGTTGCAGGAATTGGCCAACGGCTCCTTTCAAC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTTCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRASRNGP*CEDSPN
Trigger: GTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGA...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRSLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTGACAGGAAAGCCCTaGGGAGGAGCTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLTGKP*GGAGKT
Trigger: TGTCTTCCCAGCTCCTCCTCAGGGCTTTCCTGTCAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGCGACTAGGTTTTCCTaGGCCCAAATCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAATRFS*AQISSL
Trigger: GAGTGAGCTGATTTGGGCTCAGGAAAACCTAGTCGC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCGTCCTCCTTCGTCTaGCTCAGGATGTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPSSFV*LRMCRR
Trigger: CCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTCCCGAGGCCCAGATaGGATACCAGGGGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVPRPR*DTRGRR
Trigger: TCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCCCAAAAGCCCTGCATaGCCCCTTTACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSPKSPA*PLYFFL
Trigger: AAGGAAGAAGTAAAGGGGGCATGCAGGGCTTTTGGG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCACTGGCCACTGGGTGTaGAAGCTCCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGTGHWV*KLQLLP
Trigger: AGGGAGAAGCTGGAGCTTGCACACCCAGTGGCCAGT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCCCAGGGCACTGCCCTaGCCCAATACCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRPRALP*PNTSAQ
Trigger: CTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMLPPGH*PAPIPV
Trigger: CACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGAAAAATGGCCCTTCTaGCACTCCCTGAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEEKWPF*HSLSHL
Trigger: TAGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGAGCCCACAAGGGCCTaGAGGAGACCCTCCATAATC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTREPTRA*RRPSII
Trigger: GATTATGGAGGGTCTCCTGCAGGCCCTTGTGGGCTC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACTCCTGCAACCGCGTaGCCGTCTCTGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARATPATA*PSLPPA
Trigger: AGCTGGGGGCAGAGACGGCCACGCGGTTGCAGGAGT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCTGGGTCACCTGCTCTaGCTGGCTGCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERELGHLL*LAARAT
Trigger: GGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCTCCTTGCCTTCCTCTaGCCGCTGGGTCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVLLAFL*PLGHLL
Trigger: GAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRNSKFW*RTDQAP
Trigger: GGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGTTTCTGAGCCAATCTaGCCCCCAAAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEVSEPI*PPKALH
Trigger: ATGCAGGGCTTTTGGGGGCCAGATTGGCTCAGAAAC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAACAACTTGCTCTCTGTaGGGAGCTGTGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGETTCSL*GAVPTS
Trigger: TGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCCCACCGGAAACTGCTaGGGGGCTCTGGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVPTGNC*GALECK
Trigger: CTTACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMAVEWV*DGRTQH
Trigger: ATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCGTGGGTCATGGTCATaGGAGTCTGGTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLRGSWS*ESGVPR
Trigger: CCTCGGGACACCAGACTCTCATGACCATGACCCACG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRGPSHV*EQDDQL
Trigger: AAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGHRQAE*KSRSLQ
Trigger: TTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCAGCTCATTCTTCCCTaGAGCTGCCTGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRQLILP*SCLREG
Trigger: TCCCTCTCTCAGGCAGCTTCAGGGAAGAATGAGCTG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTTCAGGGGAGACAGTaGCGGGTCTGCCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVQGRQ*RVCPVH
Trigger: ATGCACTGGGCAGACCCGTCACTGTCTCCCCTGAAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGTCCCGAGGCCCAGATaGGATACCAGGGGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAVPRPR*DTRGRR
Trigger: TCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGAC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRARVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGACTGGCCACTGGGTGTaGAAGCTCCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMTGHWV*KLQLLP
Trigger: AGGGAGAAGCTGGAGCTTGCACACCCAGTGGCCAGT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTCTGTGGGGAGCTGTaGCCACTTCATAGGACACTG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLCGEL*PLHRTL
Trigger: CAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCGACCTGCTGACAACTTaGTCTCTGTGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGDLLTT*SLWGAV
Trigger: CACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTC...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGTTGAAAGGAGCCGTTaGCCAATTCGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRVERSR*PIRHRG
Trigger: CCCTCTGTGGCGAATTGGCCAACGGCTCCTTTCAAC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSVKPID*APSILL
Trigger: CAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCAC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGVKPID*APSILL
Trigger: CAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCAC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTTGCCAAGAGTCTGGTTaGGTTGCTTCTCTCCACGTT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRACQESG*VASLHV
Trigger: AACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCA...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGTGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTCGCCGATCACCCTaGTTAGCCCGGCGACCCTGC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTVRRSP*LARRPC
Trigger: GCAGGGTCGCCGGGCTAACCAGGGTGATCGGCGAAC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGGGCAGGATGGGCAGTaGGGGGAGCTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFGQDGQ*GELLPS
Trigger: GCTGGGAAGGAGCTCCCCCCACTGCCCATCCTGCCC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPTRQG*KEPLAN
Trigger: ATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCTGCAGTGGTTCCCCTTaGCCACAGTACAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGCSGSP*PQYRKQ
Trigger: TTGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCA...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCCCACCGGAAACTGCTaGGGGGCTCTGGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREPTGNC*GALECK
Trigger: CTTACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMEHEAS*EKSPPE
Trigger: TTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVAVEWV*DGRTQH
Trigger: ATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCTGTATGAGAACAGGATaGCCAGCTTCCCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGCMRTG*PASRGS
Trigger: TGACCCACGGGAAGCTGGTCATCCTGTTCTCATACA...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCTACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVSLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMLHVAV*RWAGPI
Trigger: GATTGGCCCTGCCCACCGTCAAACTGCTACATGTAG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRALPKAI*KETALF
Trigger: GAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGTCTGTTTCTTGCCATaGGTAGCAAACCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSVCFLP*VANQCT
Trigger: TGTACACTGGTTTGCTACTCATGGCAAGAAACAGAC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGTTCAGGGGAGACAGTaGCGGGTCTGCCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREVQGRQ*RVCPVH
Trigger: ATGCACTGGGCAGACCCGTCACTGTCTCCCCTGAAC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGTTCAGGGGAGACAGTaGCGGGTCTGCCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHVQGRQ*RVCPVH
Trigger: ATGCACTGGGCAGACCCGTCACTGTCTCCCCTGAAC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGGGATCTCTTACTCCTaGAACCGCGTGGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVGISYS*NRVAVS
Trigger: AGAGACGGCCACGCGGTTGCAGGAGTAAGAGATCCC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTCCAGCAGCCGCTGCTaGCAAGAGAGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERESSSRC*QERKAA
Trigger: TGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLPPGH*PAPIPV
Trigger: CACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERELPPGH*PAPIPV
Trigger: CACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCT +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGTQKEG*LPVTDS
Trigger: AGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGATGGTCATGAGAGTCTaGTGTCCCGAGGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMMVMRV*CPEAQM
Trigger: CATCTGGGCCTCGGGACACCAGACTCTCATGACCAT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGAGAGTAAGAGCACTTaGTGCCCTCCCCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVESKST*CPPLLL
Trigger: GAGCAGGAGGGGAGGGCACCAAGTGCTCTTACTCTC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCTGGAGGATGTCAACATaGGGAAGGCTCGAGCAACCA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGWRMST*GRLEQP
Trigger: TGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCCACACGCTGGCAAATaGCACACGGAAACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVPHAGK*HTETWL
Trigger: CAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGTTCGCCGATCACCCTaGTTAGCCCGGCGACCCTGC +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMVRRSP*LARRPC
Trigger: GCAGGGTCGCCGGGCTAACCAGGGTGATCGGCGAAC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTGGCAGAGGGAAAAATaGCCCTTCTGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMWQREK*PFCHSL
Trigger: CAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGATAGCTCCCCGACATaGAGGGCAGGCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRDSSPT*RAGQEK
Trigger: TTTCTCCTGGCCTGCCCTCCATGTCGGGGAGCTATC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 72 bp TGGGACACCAGTGACCAGAATCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATCCCTCGGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WDTSDQNLAGSV*TTSCEIPRLWA
Trigger: AGCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTCACTGGTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLEHEAS*EKSPPE
Trigger: TTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATREHEAS*EKSPPE
Trigger: TTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCAGTGATAAAAGAACATaGGGCCAGTTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSSDKRT*GQLREE
Trigger: CTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAAVEWV*DGRTQH
Trigger: ATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTGTATGAGAACAGGATaGCCAGCTTCCCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMCMRTG*PASRGS
Trigger: TGACCCACGGGAAGCTGGTCATCCTGTTCTCATACA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCAGCTCATTCTTCCCTaGAGCTGCCTGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLQLILP*SCLREG
Trigger: TCCCTCTCTCAGGCAGCTTCAGGGAAGAATGAGCTG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGAACTGGCTTGGCACTaGCAGGAAAGCCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREELAWH*QESPEE
Trigger: CTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCTGCCTCCCTGTCACTaGCTCTACCCGCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPLPPCH*LYPPQS
Trigger: GCTTTGTGGCGGGTAGAGTCAGTGACAGGGAGGCAG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGTCTGTTTCTTGCCATaGGTAGCAAACCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAVCFLP*VANQCT
Trigger: TGTACACTGGTTTGCTACTCATGGCAAGAAACAGAC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTTCCAGCAGCCGCTGCTaGCAAGAGAGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTSSSRC*QERKAA
Trigger: TGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGA...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCCGTCCTCCTTCGTCTaGCTCAGGATGTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMPSSFV*LRMCRR
Trigger: CCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLRQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVQPGNL*HATETR
Trigger: CCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRQPGNL*HATETR
Trigger: CCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCAACCAGGCAACCTGTaGCATGCCACAGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLQPGNL*HATETR
Trigger: CCTCGTTTCTGTGGCATGGCACAGGTTGCCTGGTTG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCCTGTAAGGCAGGCTaGCAAGAGTCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPCKAG*QESGWV
Trigger: AACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACACTGGCCACTGGGTGTaGAAGCTCCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHTGHWV*KLQLLP
Trigger: AGGGAGAAGCTGGAGCTTGCACACCCAGTGGCCAGT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTGGCTTCAGAACCCTaGATGCCTTCACAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVASEP*MPSQAD
Trigger: GTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGAAAAATGGCCCTTCTaGCACTCCCTGAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMEKWPF*HSLSHL
Trigger: TAGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGAGCCCACAAGGGCCTaGAGGAGACCCTCCATAATC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAEPTRA*RRPSII
Trigger: GATTATGGAGGGTCTCCTGCAGGCCCTTGTGGGCTC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCT +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMTQKEG*LPVTDS
Trigger: AGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGCTCCATTCAACATGTaGATCTGTAGCTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEAPFNM*ICSLKT
Trigger: CGTCTTCAAGCTACAGATGCACATGTTGAATGGAGC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGTTGAAAGGAGCCGTTaGCCAATTCGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLVERSR*PIRHRG
Trigger: CCCTCTGTGGCGAATTGGCCAACGGCTCCTTTCAAC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGAAGCAAGAGTGAGATaGAACACAAGCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTREARVR*NTSPEG
Trigger: ACCCTCTGGGCTTGTGTTCCATCTCACTCTTGCTTC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCATTGCCTGCAAAACTaGGGTCCACGCCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRHCLQN*GPRPHR
Trigger: TCTATGGGGGCGTGGACCCCAGTTTTGCAGGCAATG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGTCACCTGCTCTGGCTaGCTGCCAGGGCTACCCCTA +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFVTCSG*LPGLPL
Trigger: TAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGAC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTGGAGGATGTCAACATaGGGAAGGCTCGAGCAACCA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMWRMST*GRLEQP
Trigger: TGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGGTGGATCTGTCTCTaGCTTGGCCATGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVRWICL*LGHARH
Trigger: ATGCCTGGCATGGCCAAGCCAGAGACAGATCCACCT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTCCTGTACCAAAGCTaGGGCAGTAGAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLLYQS*GSRGPA
Trigger: TGCCGGCCCTCTACTGCCCCAGCTTTGGTACAGGAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLTWLGN*LGTDRK
Trigger: TTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGGCTACCTAGGGGCTaGAGGGAGTACTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVRLPRG*REYSFP
Trigger: GGGAAAAGAGTACTCCCTCCAGCCCCTAGGTAGCCT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGAAGCAGGCGTGACTaGGTCTCTGCTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRSRRD*VSAIWS
Trigger: ACTCCAAATAGCAGAGACCCAGTCACGCCTGCTTCT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVGRLSL*LQNPAC
Trigger: GCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGACAACTTGCTCTCTGTaGGGAGCTGTGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMTTCSL*GAVPTS
Trigger: TGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGTGGCAGAGGGAAAAATaGCCCTTCTGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRWQREK*PFCHSL
Trigger: CAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCA...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 72 bp TGCCCCAATACCAGTGCACAGAGACCTGCTGACAACTaGCTCTCTGTGGGGAGCTGTGCCCACTTCATAGGA +
Preference number: 4 (lower is better)
Translates to: CPNTSAQRPADN*LSVGSCAHFIG
Trigger: TCCTATGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTCTCTGTGCACTGGTATTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAEHEAS*EKSPPE
Trigger: TTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTAVEWV*DGRTQH
Trigger: ATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTGTATGAGAACAGGATaGCCAGCTTCCCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVCMRTG*PASRGS
Trigger: TGACCCACGGGAAGCTGGTCATCCTGTTCTCATACA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHHRQAE*KSRSLQ
Trigger: TTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGTGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRWLVLS*PRAVKS
Trigger: GGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCA...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGTCATGGGACACCAGTaGCCAGAATCTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGVMGHQ*PESGWF
Trigger: GAACCAGCCAGATTCTGGTCACTGGTGTCCCATGAC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARALHVAV*RWAGPI
Trigger: GATTGGCCCTGCCCACCGTCAAACTGCTACATGTAG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCTGACAGGAAAGCCCTaGGGAGGAGCTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPLTGKP*GGAGKT
Trigger: TGTCTTCCCAGCTCCTCCTCAGGGCTTTCCTGTCAG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGAGAAAGAGATTGCTaGCTTGGGGAGACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRRERDC*LGETES
Trigger: AGACTCAGTCTCCCCAAGTCAGCAATCTCTTTCTCT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATGCACAGAGACCTGCTaGCAACTTGCTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGCTETC*QLALCG
Trigger: CCCACAGAGAGCAAGTTGTCAGCAGGTCTCTGTGCA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCTGCTCTGGCTGGCTaGCAGGGCTACCCCTACCGT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPALAG*QGYPYR
Trigger: ACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTTTGGATTTGTCATTaGAATAGATCTCCAACCCTC +
Preference number: 4 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLWICH*NRSPTL
Trigger: GAGGGTTGGAGATCTATTGCAATGACAAATCCAAAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMRVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACCCTGTAAGGCAGGCTaGCAAGAGTCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGPCKAG*QESGWV
Trigger: AACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGCTATTTGGAGTGGATaGCACAAGTTGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVAIWSG*HKLASS
Trigger: GGAGCTGGCCAACTTGTGGCATCCACTCCAAATAGC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAACATGTTACTGTTGTaGCTCTGGGAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRNMLLL*LWEEDG
Trigger: CCCATCTTCCTCCCAGAGGCACAACAGTAACATGTT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGAGCCCACAAGGGCCTaGAGGAGACCCTCCATAATC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTEPTRA*RRPSII
Trigger: GATTATGGAGGGTCTCCTGCAGGCCCTTGTGGGCTC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGACGGGTCTGCCCAGTaGATAGCAATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMDGSAQ*IAIPAG
Trigger: CCCAGCTGGGATTGCTATGCACTGGGCAGACCCGTC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTATTTCCAAAGGCGACTaGAGATACCATTTCGGTACA +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAISKGD*RYHFGT
Trigger: TGTACCGAAATGGTATCTGCAGTCGCCTTTGGAAAT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCATTGCCTGCAAAACTaGGGTCCACGCCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREHCLQN*GPRPHR
Trigger: TCTATGGGGGCGTGGACCCCAGTTTTGCAGGCAATG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCGTAGGGGGAAGAGCTaGGAAAGGAAGAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRRGKS*ERKSGR
Trigger: TCTACCACTCTTCCTTTCCCAGCTCTTCCCCCTACG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGGAGGTCCCTGGCAGTaGAGAAATGAAACACAACCC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVGGPWQ*RNETQP
Trigger: GGGTTGTGTTTCATTTCTCCACTGCCAGGGACCTCC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVLWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAGAGTAAGAGCACTTaGTGCCCTCCCCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPESKST*CPPLLL
Trigger: GAGCAGGAGGGGAGGGCACCAAGTGCTCTTACTCTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTNSKFW*RTDQAP
Trigger: GGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGTTTCTGAGCCAATCTaGCCCCCAAAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLVSEPI*PPKALH
Trigger: ATGCAGGGCTTTTGGGGGCCAGATTGGCTCAGAAAC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGGCTGCCAAGAGTCTaGTTGGGTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVRLPRV*LGCFSP
Trigger: TGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGGCTGCCAAGAGTCTaGTTGGGTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRLPRV*LGCFSP
Trigger: TGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCCACACGCTGGCAAATaGCACACGGAAACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTPHAGK*HTETWL
Trigger: CAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGAGCTCCCACACGCTaGCAAATGGCACACGGAAAC +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERERAPTR*QMAHGN
Trigger: GTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAGGCTACCTAGGGGCTaGAGGGAGTACTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHRLPRG*REYSFP
Trigger: GGGAAAAGAGTACTCCCTCCAGCCCCTAGGTAGCCT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAGRLSL*LQNPAC
Trigger: GCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGGGGACAGAGGACTCTaGGTCAACATCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMGDRGL*VNIYKS
Trigger: GGATTTGTAGATGTTGACCCAGAGTCCTCTGTCCCC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCATAGCAATCCCAGCTaGGAACTGAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRHSNPS*ELRKDR
Trigger: CCTGTCCTTCCTCAGTTCCCAGCTGGGATTGCTATG...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 72 bp TACCCTGTAAGGCAGGCTGCCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCTTGGCCCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: YPVRQAAKSLVG*LLSTLAWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATGCAGTGGTTCCCCTTaGCCACAGTACAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGCSGSP*PQYRKQ
Trigger: TTGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERESRNGP*CEDSPN
Trigger: GTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTACATGTAGCAGTTTaGCGGTGGGCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLHVAV*RWAGPI
Trigger: GATTGGCCCTGCCCACCGTCAAACTGCTACATGTAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLTVTPL*HSGASL
Trigger: AAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCTGACAGGAAAGCCCTaGGGAGGAGCTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFLTGKP*GGAGKT
Trigger: TGTCTTCCCAGCTCCTCCTCAGGGCTTTCCTGTCAG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGAACTGGCTTGGCACTaGCAGGAAAGCCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFELAWH*QESPEE
Trigger: CTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCCATGCCTTCACAGGCTaGCAGAGGAACATGTTACTG +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVHAFTG*QRNMLL
Trigger: CAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATG...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGCGACTAGGTTTTCCTaGGCCCAAATCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAATRFS*AQISSL
Trigger: GAGTGAGCTGATTTGGGCTCAGGAAAACCTAGTCGC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCGTCCTCCTTCGTCTaGCTCAGGATGTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPSSFV*LRMCRR
Trigger: CCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTATGTGGAGTCAGCAATaGCCAGCCACTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTMWSQQ*PATSCL
Trigger: CAGGCAGGAAGTGGCTGGGCATTGCTGACTCCACAT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCAGAAAAGTTTGGCCCTaGCTTCAAAGAGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGRKVWP*LQRGPK
Trigger: TTTTGGCCCTCTTTGAAGGCAGGGCCAAACTTTTCT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCTCTCTGGCTTGGCCATaGCAGGCATGTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSLAWP*QACGFC
Trigger: GCAAAAGCCACATGCCTGGCATGGCCAAGCCAGAGA...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARALDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTCTGTGGGGAGCTGTaGCCACTTCATAGGACACTG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLCGEL*PLHRTL
Trigger: CAGTGTCCTATGAAGTGGGCACAGCTCCCCACAGAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGACCTGCTGACAACTTaGTCTCTGTGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPDLLTT*SLWGAV
Trigger: CACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAATTACCCCCAGGGCACTaGCCTGCCCCAATACCAGTG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQLPPGH*PAPIPV
Trigger: CACTGGTATTGGGGCAGGGCAGTGCCCTGGGGGTAA...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGACGGGTCTGCCCAGTaGATAGCAATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQDGSAQ*IAIPAG
Trigger: CCCAGCTGGGATTGCTATGCACTGGGCAGACCCGTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGGCTCCATTCAACATGTaGATCTGTAGCTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRAPFNM*ICSLKT
Trigger: CGTCTTCAAGCTACAGATGCACATGTTGAATGGAGC...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGTCACCTGCTCTGGCTaGCTGCCAGGGCTACCCCTA +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPVTCSG*LPGLPL
Trigger: TAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGAC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTGGGTCACCTGCTCTaGCTGGCTGCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLGHLL*LAARAT
Trigger: GGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGGTCTATTTTCTTGGCTaGAAGCCGGAGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMVYFLG*KPEQIQ
Trigger: CTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGAC...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHPGGSG*LAVYFE
Trigger: CTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGPGGSG*LAVYFE
Trigger: CTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPLLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFNSKFW*RTDQAP
Trigger: GGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATGGAGGATGTCAACATaGGGAAGGCTCGAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGWRMST*GRLEQP
Trigger: TGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGGTGGATCTGTCTCTaGCTTGGCCATGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRWICL*LGHARH
Trigger: ATGCCTGGCATGGCCAAGCCAGAGACAGATCCACCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGGCTGCCAAGAGTCTaGTTGGGTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERERLPRV*LGCFSP
Trigger: TGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCTCTGCTATTTGGAGTaGATGCCACAAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLLCYLE*MPQVGQ
Trigger: CTGGCCAACTTGTGGCATCCACTCCAAATAGCAGAG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTGGGCCAGATCATCTTTaGTGTACAAAACCAAATACT +
Preference number: 4 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAGPDHL*CTKPNT
Trigger: AGTATTTGGTTTTGTACACCAAAGATGATCTGGCCC...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGGGCCAGATCATCTTTaGTGTACAAAACCAAATACT +
Preference number: 4 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEGPDHL*CTKPNT
Trigger: AGTATTTGGTTTTGTACACCAAAGATGATCTGGCCC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTGRLSL*LQNPAC
Trigger: GCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGGGGACAGAGGACTCTaGGTCAACATCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVGDRGL*VNIYKS
Trigger: GGATTTGTAGATGTTGACCCAGAGTCCTCTGTCCCC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGATAGCTCCCCGACATaGAGGGCAGGCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMDSSPT*RAGQEK
Trigger: TTTCTCCTGGCCTGCCCTCCATGTCGGGGAGCTATC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCCACCGGAAACTGCTaGGGGGCTCTGGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPTGNC*GALECK
Trigger: CTTACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFGPSHV*EQDDQL
Trigger: AAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFHRQAE*KSRSLQ
Trigger: TTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERERATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERETVTPL*HSGASL
Trigger: AAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGACTTCTTCCTTCCTCTaGCAGGTGGATCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERETSSFL*QVDLSL
Trigger: CAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAACTTCTTCCTTCCTCTaGCAGGTGGATCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGTSSFL*QVDLSL
Trigger: CAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACATGCCTTCACAGGCTaGCAGAGGAACATGTTACTG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGHAFTG*QRNMLL
Trigger: CAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCATGCCTTCACAGGCTaGCAGAGGAACATGTTACTG +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHHAFTG*QRNMLL
Trigger: CAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCTAAGAGCAGATTCTTaGTCAGGCTCTCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLLRADS*SGSPCL
Trigger: AAGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCAGCCACTTCCTGCCTaGTTGAGGTCCGTGCATAAC +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMQPLPA*LRSVHN
Trigger: GTTATGCACGGACCTCAAGCAGGCAGGAAGTGGCTG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGAGTTCAGATGCCTTATaGTCCCCAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMSSDAL*SPMPQI
Trigger: TATTTGGGGCATTGGGGAGCATAAGGCATCTGAACT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGACGGGTCTGCCCAGTaGATAGCAATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPDGSAQ*IAIPAG
Trigger: CCCAGCTGGGATTGCTATGCACTGGGCAGACCCGTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCGGGACATGATGCAGTaGTTCCCCTTGACCACAGTA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRDMMQ*FPLTTV
Trigger: TACTGTGGTCAAGGGGAACCACTGCATCATGTCCCG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTATGGTCATGAGAGTCTaGTGTCCCGAGGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFMVMRV*CPEAQM
Trigger: CATCTGGGCCTCGGGACACCAGACTCTCATGACCAT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGTTCAGTCTATTTTCTTaGCTGGAAGCCGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRFSLFS*LEAGAN
Trigger: ATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAA...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCGTAGGGGGAAGAGCTaGGAAAGGAAGAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRRGKS*ERKSGR
Trigger: TCTACCACTCTTCCTTTCCCAGCTCTTCCCCCTACG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTCTGGGCTTGCCGCTaGTATAGAAACAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLWACR*YRNKAS
Trigger: TGAGGCCTTGTTTCTATACCAGCGGCAAGCCCAGAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGAAATCCCTCGGCTCTaGGCTTGCCGCTGGTATAGA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMEIPRL*ACRWYR
Trigger: TCTATACCAGCGGCAAGCCCAGAGCCGAGGGATTTC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATREGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPGGSG*LAVYFE
Trigger: CTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTATGGAATCTAGCCCTTaGGCTGGGTGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFMESSP*AGWCSH
Trigger: GTGAGAGCACCACCCAGCCCAAGGGCTAGATTCCAT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGAATCTTCCAGAAATaGGCCCTGATGCGAGGATTC +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVRIFQK*ALMRGF
Trigger: GAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAGAATCTTCCAGAAATaGGCCCTGATGCGAGGATTC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLRIFQK*ALMRGF
Trigger: GAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLVKPID*APSILL
Trigger: CAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCAC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGGCTGCCAAGAGTCTaGTTGGGTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRLPRV*LGCFSP
Trigger: TGGAGAGAAGCAACCCAACCAGACTCTTGGCAGCCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAAGCCCCACTGGCCACTaGGTGTGCAAGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPSPTGH*VCKLQL
Trigger: AAGCTGGAGCTTGCACACCCAGTGGCCAGTGGGGCT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTCTGCTATTTGGAGTaGATGCCACAAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLCYLE*MPQVGQ
Trigger: CTGGCCAACTTGTGGCATCCACTCCAAATAGCAGAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAAGAAGCAGGCGTGACTaGGTCTCTGCTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARARSRRD*VSAIWS
Trigger: ACTCCAAATAGCAGAGACCCAGTCACGCCTGCTTCT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGGGGACAGAGGACTCTaGGTCAACATCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAGDRGL*VNIYKS
Trigger: GGATTTGTAGATGTTGACCCAGAGTCCTCTGTCCCC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGGGGACAGAGGACTCTaGGTCAACATCTACAAATCC +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREGDRGL*VNIYKS
Trigger: GGATTTGTAGATGTTGACCCAGAGTCCTCTGTCCCC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCATAGCAATCCCAGCTaGGAACTGAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTHSNPS*ELRKDR
Trigger: CCTGTCCTTCCTCAGTTCCCAGCTGGGATTGCTATG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPTRQG*KEPLAN
Trigger: ATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACGTGGGTCATGGTCATaGGAGTCTGGTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETRGSWS*ESGVPR
Trigger: CCTCGGGACACCAGACTCTCATGACCATGACCCACG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGTGTATGAGAACAGGATaGCCAGCTTCCCGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMCMRTG*PASRGS
Trigger: TGACCCACGGGAAGCTGGTCATCCTGTTCTCATACA...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTTGACCACGAGCTGTaGAATCCCTCGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLDHEL*NPSALG
Trigger: GCCCAGAGCCGAGGGATTTCACAGCTCGTGGTCAAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGTGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMWLVLS*PRAVKS
Trigger: GGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCA...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARARSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGAGGCCAAGGGGCACTaGGGCCTTGTGTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPEAKGH*GLVYFL
Trigger: GAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGAGCTAGTCTTCAGCTaGGGCACAGATCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQELVFS*GTDPLL
Trigger: CAGCAGAGGATCTGTGCCTCAGCTGAAGACTAGCTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTACTTCTTCCTTCCTCTaGCAGGTGGATCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTTSSFL*QVDLSL
Trigger: CAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHLPKAI*KETALF
Trigger: GAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGAGAAAGAGATTGCTaGCTTGGGGAGACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERERERDC*LGETES
Trigger: AGACTCAGTCTCCCCAAGTCAGCAATCTCTTTCTCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGTCTGTTTCTTGCCATaGGTAGCAAACCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRVCFLP*VANQCT
Trigger: TGTACACTGGTTTGCTACTCATGGCAAGAAACAGAC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCTAAGAGCAGATTCTTaGTCAGGCTCTCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHLRADS*SGSPCL
Trigger: AAGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTTTGGATTTGTCATTaGAATAGATCTCCAACCCTC +
Preference number: 4 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLWICH*NRSPTL
Trigger: GAGGGTTGGAGATCTATTGCAATGACAAATCCAAAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCAGTTCAGATGCCTTATaGTCCCCAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVSSDAL*SPMPQI
Trigger: TATTTGGGGCATTGGGGAGCATAAGGCATCTGAACT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACTGGCCACTGGGTGTaGAAGCTCCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTGHWV*KLQLLP
Trigger: AGGGAGAAGCTGGAGCTTGCACACCCAGTGGCCAGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAAACATGTTACTGTTGTaGCTCTGGGAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARANMLLL*LWEEDG
Trigger: CCCATCTTCCTCCCAGAGGCACAACAGTAACATGTT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGAAAAATGGCCCTTCTaGCACTCCCTGAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMEKWPF*HSLSHL
Trigger: TAGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAAGCAAGAGTGAGATaGAACACAAGCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPEARVR*NTSPEG
Trigger: ACCCTCTGGGCTTGTGTTCCATCTCACTCTTGCTTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCTGGGTCACCTGCTCTaGCTGGCTGCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALLGHLL*LAARAT
Trigger: GGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCCTGGAGGGAGTGGCTaGTTGGCTGTTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMPGGSG*LAVYFE
Trigger: CTCAAAGTAAACAGCCAACCAGCCACTCCCTCCAGG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAGCAACTCCAAGTTCTaGTGGAGGACAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQSNSKF*WRTDQA
Trigger: GGCCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTTGGAGGATGTCAACATaGGGAAGGCTCGAGCAACCA +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFWRMST*GRLEQP
Trigger: TGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCA...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACACGGAAACCTGGCTaGGGAACTGGCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTRKPG*GTGLAL
Trigger: CAGTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCACACGCTGGCAAATaGCACACGGAAACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPHAGK*HTETWL
Trigger: CAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGAAGCAGGCGTGACTaGGTCTCTGCTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRSRRD*VSAIWS
Trigger: ACTCCAAATAGCAGAGACCCAGTCACGCCTGCTTCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETPTRQG*KEPLAN
Trigger: ATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGTGATAAAAGAACATaGGGCCAGTTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRSDKRT*GQLREE
Trigger: CTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTACTGCCCTCTCCCATaGTTTTATCAAGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHYCPLP*FYQELG
Trigger: ACCCAGTTCTTGATAAAATCATGGGAGAGGGCAGTA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAATGGCTGGTTCTGTCTTaGCCACGAGCTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQWLVLS*PRAVKS
Trigger: GGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCA...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACATCCTTGTGGAGCACCTaGACCTCCACCCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETSLWST*TSTHED
Trigger: GTCCTCATGGGTGGAGGTTCAGGTGCTCCACAAGGA...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFRATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMTVTPL*HSGASL
Trigger: AAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAGAATGCGATGAAGTTTaGGGAGAGAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAECDEV*GEREKE
Trigger: CTCTTTCTCTCTCTCTCCTCAAACTTCATCGCATTC...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGAATGCGATGAAGTTTaGGGAGAGAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHECDEV*GEREKE
Trigger: CTCTTTCTCTCTCTCTCCTCAAACTTCATCGCATTC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCACTTCATAGGACACTaGATTACCAATGATCACAAA +
Preference number: 4 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRHFIGH*ITNDHK
Trigger: TTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGCGACTAGGTTTTCCTaGGCCCAAATCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQATRFS*AQISSL
Trigger: GAGTGAGCTGATTTGGGCTCAGGAAAACCTAGTCGC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCATTTGCTAAGCTCCTaGCAGAAACCATTACAGATC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLHLLSS*QKPLQI
Trigger: GATCTGTAATGGTTTCTGTCAGGAGCTTAGCAAATG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGGGATCTCTTACTCCTaGAACCGCGTGGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETGISYS*NRVAVS
Trigger: AGAGACGGCCACGCGGTTGCAGGAGTAAGAGATCCC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS-3UTR GCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAACTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQLGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGAGAAAAGTTTGGCCCTaGCTTCAAAGAGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEERERKVWP*LQRGPK
Trigger: TTTTGGCCCTCTTTGAAGGCAGGGCCAAACTTTTCT...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAAGGCAACCTGTGCCATaGCACAGAAACGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPRQPVP*HRNEEE
Trigger: CTCCTCCTCGTTTCTGTGGCATGGCACAGGTTGCCT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAAGTTCAGATGCCTTATaGTCCCCAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARASSDAL*SPMPQI
Trigger: TATTTGGGGCATTGGGGAGCATAAGGCATCTGAACT...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTAGAGTCTGGTTGGGTTaGTTCTCTCCACGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFRVWLG*FSPRWL
Trigger: AAGCCAACGTGGAGAGAAGCAACCCAACCAGACTCT...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCCTGTAAGGCAGGCTaGCAAGAGTCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPCKAG*QESGWV
Trigger: AACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGTGGCTTCAGAACCCTaGATGCCTTCACAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPVASEP*MPSQAD
Trigger: GTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCAC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGACCTGCTGACAACTTaGTCTCTGTGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPDLLTT*SLWGAV
Trigger: CACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCCCAGGGCACTGCCCTaGCCCAATACCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWPRALP*PNTSAQ
Trigger: CTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCCCAGGGCACTGCCCTaGCCCAATACCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALPRALP*PNTSAQ
Trigger: CTGTGCACTGGTATTGGGGCAGGGCAGTGCCCTGGG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTGAAGCAAGAGTGAGATaGAACACAAGCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFEARVR*NTSPEG
Trigger: ACCCTCTGGGCTTGTGTTCCATCTCACTCTTGCTTC...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPEGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMSNWKY*NWSRST
Trigger: AGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCCCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAACACGGAAACCTGGCTaGGGAACTGGCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETTRKPG*GTGLAL
Trigger: CAGTGCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCTTGGCCCACATCCCTaGCCAAGGCTACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWLGPHP*PRLPRG
Trigger: GCCCCTAGGTAGCCTTGGCCAGGGATGTGGGCCAAG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGTGGATGCCACAAGTTaGCCAGCTCCACAGACTGTT +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQVDATS*PAPQTV
Trigger: AACAGTCTGTGGAGCTGGCCAACTTGTGGCATCCAC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGGGAGACTGAGTCTGTaGCTTCAGAACCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPGRLSL*LQNPAC
Trigger: GCATGCAGGGTTCTGAAGCCACAGACTCAGTCTCCC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGTTCGCCGATCACCCTaGTTAGCCCGGCGACCCTGC +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVVRRSP*LARRPC
Trigger: GCAGGGTCGCCGGGCTAACCAGGGTGATCGGCGAAC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTATTCCTGCAACCGCGTaGCCGTCTCTGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALIPATA*PSLPPA
Trigger: AGCTGGGGGCAGAGACGGCCACGCGGTTGCAGGAAT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372073.5
3UTR CAA 72 bp CTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGCCAATCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LVKPIDWAPSIL*TYMFLSQSGPQ
Trigger: TTGGGGGCCAGATTGGCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCCCACCGGAAACTGCTaGGGGGCTCTGGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALPTGNC*GALECK
Trigger: CTTACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCGTGGGTCATGGTCATaGGAGTCTGGTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWRGSWS*ESGVPR
Trigger: CCTCGGGACACCAGACTCTCATGACCATGACCCACG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCGTGGGTCATGGTCATaGGAGTCTGGTGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRGSWS*ESGVPR
Trigger: CCTCGGGACACCAGACTCTCATGACCATGACCCACG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCATCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPSRNGP*CEDSPN
Trigger: GTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGA...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCACTTCATAGGACACTaGATTACCAATGATCACAAA +
Preference number: 4 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMHFIGH*ITNDHK
Trigger: TTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCATTTGCTAAGCTCCTaGCAGAAACCATTACAGATC +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREHLLSS*QKPLQI
Trigger: GATCTGTAATGGTTTCTGTCAGGAGCTTAGCAAATG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGTTCAGGGGAGACAGTaGCGGGTCTGCCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWVQGRQ*RVCPVH
Trigger: ATGCACTGGGCAGACCCGTCACTGTCTCCCCTGAAC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGTCAAGTCACGACTTaGTTCCTCAGGGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSQVTT*FLREEK
Trigger: TTTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGACAACCCAATCTCATTaGTTCGATGCCAAAAGAACT +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRTTQSH*FDAKRT
Trigger: AGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAGAGGCACAGATCCTCTaGTGGCAGCAACTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPEAQIL*WQQLQV
Trigger: AACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCCTC...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACCAAGCACCAGAAAGTaGCCTCCAGAATGGGGTACT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPPSTRK*PPEWGT
Trigger: AGTACCCCATTCTGGAGGGCACTTTCTGGTGCTTGG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACCCTGTAAGGCAGGCTaGCAAGAGTCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETPCKAG*QESGWV
Trigger: AACCCAACCAGACTCTTGGCAGCCTGCCTTACAGGG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTQKEG*LPVTDS
Trigger: AGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACATTTCCAAAGGCGACTaGAGATACCATTTCGGTACA +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHISKGD*RYHFGT
Trigger: TGTACCGAAATGGTATCTGCAGTCGCCTTTGGAAAT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCCGTTGGCCAATTCCTaGAACCGCGTGGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWPLANS*NRVAVS
Trigger: AGAGACGGCCACGCGGTTGCAGGAATTGGCCAACGG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACGGGACATGATGCAGTaGTTCCCCTTGACCACAGTA +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPRDMMQ*FPLTTV
Trigger: TACTGTGGTCAAGGGGAACCACTGCATCATGTCCCG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGATTCAGTCTATTTTCTTaGCTGGAAGCCGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGFSLFS*LEAGAN
Trigger: ATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAA...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAAGCCTGGAGGTCCCTaGCAGTGGAGAAATGAAACA +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQKPGGP*QWRNET
Trigger: TGTTTCATTTCTCCACTGCCAGGGACCTCCAGGCTT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTCCAACCCTCTCAATaGAATCTAGCCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLQPSQ*NLALGL
Trigger: CAGCCCAAGGGCTAGATTCCATTGAGAGGGTTGGAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 4 (lower is better)
Translates to: SKGKLVEDVNMGKARATRNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCATGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSNWKY*NWSRST
Trigger: AGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGA...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGCAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETTWLGN*LGTDRK
Trigger: TTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCTTGGCCCACATCCCTaGCCAAGGCTACCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVLGPHP*PRLPRG
Trigger: GCCCCTAGGTAGCCTTGGCCAGGGATGTGGGCCAAG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGTGGGTCTCTGCTATTTaGAGTGGATGCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMWVSAI*SGCHKL
Trigger: CAACTTGTGGCATCCACTCCAAATAGCAGAGACCCA...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACAACTTGCTCTCTGTaGGGAGCTGTGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTTCSL*GAVPTS
Trigger: TGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 72 bp TGTATTTCCTCATCAGCTATTCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAATCCAGCCATTCAAGGA +
Preference number: 4 (lower is better)
Translates to: CISSSAIPTCSS*TVGRANPAIQG
Trigger: TCCTTGAATGGCTGGATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGGAATAGCTGATGAGGAAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTTTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACAGTCACACCCCTATaGCATTCCGGAGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTVTPL*HSGASL
Trigger: AAGACTAGCTCCGGAATGTCATAGGGGTGTGACTGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGAACTGGCTTGGCACTaGCAGGAAAGCCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWELAWH*QESPEE
Trigger: CTCCTCAGGGCTTTCCTGTCAGTGCCAAGCCAGTTC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACATGCCTTCACAGGCTaGCAGAGGAACATGTTACTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPHAFTG*QRNMLL
Trigger: CAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCATTTGCTAAGCTCCTaGCAGAAACCATTACAGATC +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTHLLSS*QKPLQI
Trigger: GATCTGTAATGGTTTCTGTCAGGAGCTTAGCAAATG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGAGCCCACAAGGGCCTaGAGGAGACCCTCCATAATC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALEPTRA*RRPSII
Trigger: GATTATGGAGGGTCTCCTGCAGGCCCTTGTGGGCTC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCATTTCCAAAGGCGACTaGAGATACCATTTCGGTACA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPISKGD*RYHFGT
Trigger: TGTACCGAAATGGTATCTGCAGTCGCCTTTGGAAAT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGTCTATTTTCTTGGCTaGAAGCCGGAGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQVYFLG*KPEQIQ
Trigger: CTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGAC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTTTCAGTCTATTTTCTTaGCTGGAAGCCGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTFSLFS*LEAGAN
Trigger: ATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAA...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCTGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGAGAGTAAGAGCACTTaGTGCCCTCCCCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALESKST*CPPLLL
Trigger: GAGCAGGAGGGGAGGGCACCAAGTGCTCTTACTCTC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCATGCCAAGAGTCTGGTTaGGTTGCTTCTCTCCACGTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPCQESG*VASLHV
Trigger: AACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCA...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTTGGCACACGGAAACCTaGCTGGGGAACTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVWHTET*LGNWLG
Trigger: GCCAAGCCAGTTCCCCAGCCAGGTTTCCGTGTGCCA...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTCTGCTATTTGGAGTaGATGCCACAAGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLCYLE*MPQVGQ
Trigger: CTGGCCAACTTGTGGCATCCACTCCAAATAGCAGAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGGGCCAGATCATCTTTaGTGTACAAAACCAAATACT +
Preference number: 4 (lower is better)
Translates to: PATLQAASMNAMKFEEREGPDHL*CTKPNT
Trigger: AGTATTTGGTTTTGTACACCAAAGATGATCTGGCCC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAACAACTTGCTCTCTGTaGGGAGCTGTGCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETTTCSL*GAVPTS
Trigger: TGAAGTGGGCACAGCTCCCCACAGAGAGCAAGTTGT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGATAGCTCCCCGACATaGAGGGCAGGCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWDSSPT*RAGQEK
Trigger: TTTCTCCTGGCCTGCCCTCCATGTCGGGGAGCTATC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGAGTGATAAAAGAACATaGGGCCAGTTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMSDKRT*GQLREE
Trigger: CTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCACTTCCTGCCTGCTTaGGGTCCGTGCATAACTGAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALHFLPA*GPCITE
Trigger: CTCAGTTATGCACGGACCTCAAGCAGGCAGGAAGTG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAAGGGCCACCCTAAGGTaGGAGGCACTAAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETRATLR*EALRKV
Trigger: AACTTTTCTTAGTGCCTCTCACCTTAGGGTGGCCCT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAACTTCTTCCTTCCTCTaGCAGGTGGATCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETTSSFL*QVDLSL
Trigger: CAGAGACAGATCCACCTGTCAGAGGAAGGAAGAAGT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGGCACAGGGCAGATATaGGGGCTACCCTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWGTGQI*GLPYKV
Trigger: CACCTTATAGGGTAGCCCTCATATCTGCCCTGTGCC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLPKAI*KETALF
Trigger: GAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGACCAGAAGCAGGCGTaGCTGGGTCTCTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWDQKQA*LGLCYL
Trigger: CAAATAGCAGAGACCCAGTCACGCCTGCTTCTGGTC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGAATGCGATGAAGTTTaGGGAGAGAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQECDEV*GEREKE
Trigger: CTCTTTCTCTCTCTCTCCTCAAACTTCATCGCATTC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACACTTCATAGGACACTaGATTACCAATGATCACAAA +
Preference number: 4 (lower is better)
Translates to: RQSKGKLVEDVNMGKARAHFIGH*ITNDHK
Trigger: TTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGTGCACAGAGACCTGCTaGCAACTTGCTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWCTETC*QLALCG
Trigger: CCCACAGAGAGCAAGTTGTCAGCAGGTCTCTGTGCA...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTTGCACAGAGACCTGCTaGCAACTTGCTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALCTETC*QLALCG
Trigger: CCCACAGAGAGCAAGTTGTCAGCAGGTCTCTGTGCA...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGTCTGTTTCTTGCCATaGGTAGCAAACCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQVCFLP*VANQCT
Trigger: TGTACACTGGTTTGCTACTCATGGCAAGAAACAGAC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCACAACCCAATCTCATTaGTTCGATGCCAAAAGAACT +
Preference number: 4 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPTTQSH*FDAKRT
Trigger: AGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCCTCGGCTCTGGGCTTaGCGCTGGTATAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALPRLWA*RWYRNK
Trigger: CTTGTTTCTATACCAGCGGCAAGCCCAGAGCCGAGG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGTGGCTTCAGAACCCTaGATGCCTTCACAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALVASEP*MPSQAD
Trigger: GTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCAC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGATTTCCAAAGGCGACTaGAGATACCATTTCGGTACA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMISKGD*RYHFGT
Trigger: TGTACCGAAATGGTATCTGCAGTCGCCTTTGGAAAT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCTGCTCCCCAAGCCCTaGGGATTGATAGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALLLPKP*GLIASM
Trigger: CATTGAGGCTATCAATCCCCAGGGCTTGGGGAGCAG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTAACTCCAAGTTCTGGTaGAGGACAGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVNSKFW*RTDQAP
Trigger: GGGGGCCTGGTCTGTCCTCCACCAGAACTTGGAGTT...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGGTGGATCTGTCTCTaGCTTGGCCATGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRWICL*LGHARH
Trigger: ATGCCTGGCATGGCCAAGCCAGAGACAGATCCACCT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWTWLGN*LGTDRK
Trigger: TTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGT...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGAGCTCCCACACGCTaGCAAATGGCACACGGAAAC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRAPTR*QMAHGN
Trigger: GTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCATGGGTCTCTGCTATTTaGAGTGGATGCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPWVSAI*SGCHKL
Trigger: CAACTTGTGGCATCCACTCCAAATAGCAGAGACCCA...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGGGCCAGATCATCTTTaGTGTACAAAACCAAATACT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTGPDHL*CTKPNT
Trigger: AGTATTTGGTTTTGTACACCAAAGATGATCTGGCCC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGTGGCAGAGGGAAAAATaGCCCTTCTGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWWQREK*PFCHSL
Trigger: CAGGGAGTGGCAGAAGGGCCATTTTTCCCTCTGCCA...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
3UTR CAA 72 bp TCTCCTTTTGTAAAGAGGCCAAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCTATTCCTACATGTAGC +
Preference number: 4 (lower is better)
Translates to: SPFVKRPRGTEA*CISSSAIPTCS
Trigger: GCTACATGTAGGAATAGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCTTGGCCTCTTTACAAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVGPSHV*EQDDQL
Trigger: AAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCACCGACAAGCAGAGTaGAAGAGCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVHRQAE*KSRSLQ
Trigger: TTGCAGTGAGCGGCTCTTTCACTCTGCTTGTCGGTG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTTCCAGAAATGGGCCCTaGTGCGAGGATTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALSRNGP*CEDSPN
Trigger: GTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGA...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTTCCTAAGGCCATTTaGAAGGAAACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLPKAI*KETALF
Trigger: GAAGAGGGCAGTTTCCTTTCAAATGGCCTTAGGAAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTAAGAGCAGATTCTTaGTCAGGCTCTCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLRADS*SGSPCL
Trigger: AAGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCCTTATGCTCCCCAATaGCCCAAATACAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALPYAPQ*PKYRPW
Trigger: CCATGGCCTGTATTTGGGGCATTGGGGAGCATAAGG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCTGGACCAGTTCAGATaGCTTATGCTCCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWLDQFR*LMLPNA
Trigger: GGCATTGGGGAGCATAAGGCATCTGAACTGGTCCAG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGCTATTTGGAGTGGATaGCACAAGTTGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALAIWSG*HKLASS
Trigger: GGAGCTGGCCAACTTGTGGCATCCACTCCAAATAGC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGCTATTTGGAGTGGATaGCACAAGTTGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWAIWSG*HKLASS
Trigger: GGAGCTGGCCAACTTGTGGCATCCACTCCAAATAGC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCATTGCCTGCAAAACTaGGGTCCACGCCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVHCLQN*GPRPHR
Trigger: TCTATGGGGGCGTGGACCCCAGTTTTGCAGGCAATG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGCATCCTGGAGGGAGTaGCTGGTTGGCTGTTTACTT +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALASWRE*LVGCLL
Trigger: AAGTAAACAGCCAACCAGCCACTCCCTCCAGGATGC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFSNWKY*NWSRST
Trigger: AGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGA...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGCACAGATCCTCTGCTaGCAGCAACTCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALAQILC*QQLQVL
Trigger: CAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACCCAAATACAGGCCATaGCTCCTTGTGAAGCCTATA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETPKYRP*LLVKPI
Trigger: TATAGGCTTCACAAGGAGCCATGGCCTGTATTTGGG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAGATAAGAGTGAGATCTaGACCAGTTCAGATGCCTTA +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQDKSEI*TSSDAL
Trigger: TAAGGCATCTGAACTGGTCCAGATCTCACTCTTATC...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTACCTGGCTGGGGAACTaGCTTGGCACTGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVTWLGN*LGTDRK
Trigger: TTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCCAGGT...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCATAGCAATCCCAGCTaGGAACTGAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWHSNPS*ELRKDR
Trigger: CCTGTCCTTCCTCAGTTCCCAGCTGGGATTGCTATG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGTACTGTATATATCTTaGCCCTCTTCACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMVLYIS*PSSLWI
Trigger: AATCCAAAGTGAAGAGGGTCAAGATATATACAGTAC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCATTCTGTGCTCACTTCTaGTTGGGATATGCATCAGTT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPFCAHF*LGYASV
Trigger: AACTGATGCATATCCCAATCAGAAGTGAGCACAGAA...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCACTTCATAGGACACTaGATTACCAATGATCACAAA +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMHFIGH*ITNDHK
Trigger: TTTGTGATCATTGGTAATTCAGTGTCCTATGAAGTG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCTAGGTCAACTGTGTTaGCTAGAGTGGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVLGQLC*LEWDRG
Trigger: TCCCCTGTCCCACTCTAGGCAACACAGTTGACCTAG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCCCAAAAGCCCTGCATaGCCCCTTTACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWPKSPA*PLYFFL
Trigger: AAGGAAGAAGTAAAGGGGGCATGCAGGGCTTTTGGG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAAGTTCAGATGCCTTATaGTCCCCAATGCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETSSDAL*SPMPQI
Trigger: TATTTGGGGCATTGGGGAGCATAAGGCATCTGAACT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGAAAAATGGCCCTTCTaGCACTCCCTGAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVEKWPF*HSLSHL
Trigger: TAGGTGGCTCAGGGAGTGGCAGAAGGGCCATTTTTC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTACACAAAAGGAGGGCTaGCTCCCTGTCACTGACTCT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVTQKEG*LPVTDS
Trigger: AGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGT...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGCTCCATTCAACATGTaGATCTGTAGCTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETAPFNM*ICSLKT
Trigger: CGTCTTCAAGCTACAGATGCACATGTTGAATGGAGC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAAAACTTACACAGGGTCTaGCCTAGTACTGTATATATC +
Preference number: 4 (lower is better)
Translates to: VETSKKILFRRGQRTLGQNLHRV*PSTVYI
Trigger: GATATATACAGTACTAGGCCAGACCCTGTGTAAGTT...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACAAACACGGTCAAACTaGAAATACTGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: QNLPEMGPDARILQTQKPQTRSN*KYWNWS
Trigger: AGACCAGTTCCAGTATTTCCAGTTTGACCGTGTTTG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTTGCCAAGAGTCTGGTTaGGTTGCTTCTCTCCACGTT +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALCQESG*VASLHV
Trigger: AACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCA...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGAGAAGCAGGCGTGACTaGGTCTCTGCTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWRSRRD*VSAIWS
Trigger: ACTCCAAATAGCAGAGACCCAGTCACGCCTGCTTCT...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCATAGCAATCCCAGCTaGGAACTGAGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVHSNPS*ELRKDR
Trigger: CCTGTCCTTCCTCAGTTCCCAGCTGGGATTGCTATG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCACTTGCTAAAATTATaGCCACTGAGGCACCGAAGC +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALHLLKL*PLRHRS
Trigger: GCTTCGGTGCCTCAGTGGTCATAATTTTAGCAAGTG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGAGAGAAAGAGATTGCTaGCTTGGGGAGACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWRERDC*LGETES
Trigger: AGACTCAGTCTCCCCAAGTCAGCAATCTCTTTCTCT...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCCCAAAAGCCCTGCATaGCCCCTTTACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVPKSPA*PLYFFL
Trigger: AAGGAAGAAGTAAAGGGGGCATGCAGGGCTTTTGGG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAACATGTTACTGTTGTaGCTCTGGGAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALNMLLL*LWEEDG
Trigger: CCCATCTTCCTCCCAGAGGCACAACAGTAACATGTT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGTCTATTTTCTTGGCTaGAAGCCGGAGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALVYFLG*KPEQIQ
Trigger: CTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGAC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACATGGAAATACTGGAACTaGTCTAGGTCAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETWKYWN*SRSTVL
Trigger: CAACACAGTTGACCTAGACCAGTTCCAGTATTTCCA...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGCACTAAGAAAAGTTTaGCCCTGCCTTCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALALRKV*PCLQRG
Trigger: CCCTCTTTGAAGGCAGGGCCAAACTTTTCTTAGTGC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGTGAAGCCTATAGACTaGGCCCCCTCTATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWVKPID*APSILL
Trigger: CAAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCAC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGATAAGAGTGAGATCTaGACCAGTTCAGATGCCTTA +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETDKSEI*TSSDAL
Trigger: TAAGGCATCTGAACTGGTCCAGATCTCACTCTTATC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGTGGGTCTCTGCTATTTaGAGTGGATGCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWWVSAI*SGCHKL
Trigger: CAACTTGTGGCATCCACTCCAAATAGCAGAGACCCA...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCTGGCAGTGGAGAAATaGAACACAACCCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWLAVEK*NTTQSH
Trigger: ATGAGATTGGGTTGTGTTTCATTTCTCCACTGCCAG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTAGGTCCGTGCATAACTaGGCTGAAGTCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVRSVHN*AEVLQQ
Trigger: TTGTTGAAGGACTTCAGCTCAGTTATGCACGGACCT...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGAATGCGATGAAGTTTaGGGAGAGAGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALECDEV*GEREKE
Trigger: CTCTTTCTCTCTCTCTCCTCAAACTTCATCGCATTC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR GCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACTTTGGATTTGTCATTaGAATAGATCTCCAACCCTC +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETLWICH*NRSPTL
Trigger: GAGGGTTGGAGATCTATTGCAATGACAAATCCAAAG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGAGGGAGTGGCTGGTTaGCTGTTTACTTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVEGVAG*LFTLSH
Trigger: ATGACTCAAAGTAAACAGCCAACCAGCCACTCCCTC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 4 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR TCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGTGATAAAAGAACATaGGGCCAGTTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALSDKRT*GQLREE
Trigger: CTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: NNSALSVDTLKKSGPRETDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGAGGACTTAATTCTTTaGCAGCCCCCTTTCAACCTA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVEDLIL*QPPFNL
Trigger: TAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGATAAGAGTGAGATCTaGACCAGTTCAGATGCCTTA +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALDKSEI*TSSDAL
Trigger: TAAGGCATCTGAACTGGTCCAGATCTCACTCTTATC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTTTCAGTCTATTTTCTTaGCTGGAAGCCGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVFSLFS*LEAGAN
Trigger: ATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAA...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGTTTACTTTGAGTCATaGGACACCAGTGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVVYFES*DTSDQN
Trigger: ATTCTGGTCACTGGTGTCCCATGACTCAAAGTAAAC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTGTGCTCACTTCTGATTaGGATATGCATCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVVLTSD*DMHQFS
Trigger: TGAGAACTGATGCATATCCCAATCAGAAGTGAGCAC...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTGATTTTATCAAGAACTaGGTGTTCTCCAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALDFIKN*VFSKSS
Trigger: ACTTGACTTGGAGAACACCCAGTTCTTGATAAAATC...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CCA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTTCAAACTGGAAATACTaGAACTGGTCTAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: ETQPNLIASMPKELLLVVSNWKY*NWSRST
Trigger: AGTTGACCTAGACCAGTTCCAGTATTTCCAGTTTGA...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS CCA 90 bp TACTGCTCCGCTCCCGCGCTCTCCGCGCCGGGCGCTCGGTTCCCCTaGCGGCCGCCGCCGCGGCGCACGGCTCCTCCTCCCCGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: YCSAPALSAPGARFP*RPPPRRTAPPPRLP
Trigger: AGGAAGACGGGGAGGAGGAGCCGTGCGCCGCGGCGGCGGCCGCCAGGGGAACCGAGCGCCCGGCGCGGAGAGCGCGGGAGCGGAGCAGTA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372072.7
ENST00000497754.1
CDS GCA 90 bp CGTTGGCCAATCGGCAGCTCGGCCCGCGGCCCCGGATCGGGCTACTaGTCCGCTCCCGCGCTCTCCGCGCCGGGCGCTCGGTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RWPIGSSARGPGSGY*SAPALSAPGARFPW
Trigger: CCAGGGGAACCGAGCGCCCGGCGCGGAGAGCGCGGGAGCGGAGCAGTAGCCCGATCCGGGGCCGCGGGCCGAGCTGCCGATTGGCCAACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497754.1
CDS GCA 90 bp AGGAGAAAGATCGGCAGCTCGGCCCGCGGCCCCGGATCGGGCTACTaGTCCGCTCCCGCGCTCTCCGCGCCGGGCGCTCGGTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RRKIGSSARGPGSGY*SAPALSAPGARFPW
Trigger: CCAGGGGAACCGAGCGCCCGGCGCGGAGAGCGCGGGAGCGGAGCAGTAGCCCGATCCGGGGCCGCGGGCCGAGCTGCCGATCTTTCTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372072.7
CDS GCA 90 bp TGCTCTGGCTGGCTGCCAGGGCTACCCCTACCGTCCTCCTTCGTCTaGCTCAGGATGTGCCGCAGGGCCACCAGGATCTCCAACAGAGCC +
Preference number: 5 (lower is better)
Translates to: CSGWLPGLPLPSSFV*LRMCRRATRISNRA
Trigger: GGCTCTGTTGGAGATCCTGGTGGCCCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
ENST00000471255.5
CDS GCA 90 bp TCTCCTTGCCTTCCTCTGGCCGCTGGGTCACCTGCTCTGGCTGGCTaGCAGGGCTACCCCTACCGTCCTCCTTCGTCTGCCTCAGGATGT +
Preference number: 5 (lower is better)
Translates to: SPCLPLAAGSPALAG*QGYPYRPPSSASGC
Trigger: ACATCCTGAGGCAGACGAAGGAGGACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
ENST00000471255.5
CDS-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGGCTGGGGAACTGGCTaGGCACTGACAGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGGWGTG*ALTGKP
Trigger: GGGCTTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS GCA 90 bp AACAGAGCCAGGGTCAGGACCACCACACTTTCCAGCAGCCGCTGCTaGCAAGAGAGGAAGGCAGCACAGTCGGGGCCCCCATTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: NRARVRTTTLSSSRC*QERKAAQSGPPLPA
Trigger: TGCAGGCAATGGGGGCCCCGACTGTGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGAAAGTGTGGTGGTCCTGACCCTGGCTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS GCA 90 bp TCCAACAGAGCCAGGGTCAGGACCACCACACTTTCCAGCAGCCGCTaGTGCCAAGAGAGGAAGGCAGCACAGTCGGGGCCCCCATTGCCT +
Preference number: 5 (lower is better)
Translates to: SNRARVRTTTLSSSR*CQERKAAQSGPPLP
Trigger: AGGCAATGGGGGCCCCGACTGTGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGAAAGTGTGGTGGTCCTGACCCTGGCTCTGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS CCA 90 bp AAGAGCAGATTCTTGCTCAGGCTCTCCTTGCCTTCCTCTGGCCGCTaGGTCACCTGCTCTGGCTGGCTGCCAGGGCTACCCCTACCGTCC +
Preference number: 5 (lower is better)
Translates to: KSRFLLRLSLPSSGR*VTCSGWLPGLPLPS
Trigger: GGACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
ENST00000471255.5
CDS-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAGGATCTGTCTCTGGCTaGGCCATGCCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGGSVSG*AMPGMW
Trigger: CCACATGCCTGGCATGGCCAAGCCAGAGACAGATCC...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGGATCTGTCTCTGGCTaGGCCATGCCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSGSVSG*AMPGMW
Trigger: CCACATGCCTGGCATGGCCAAGCCAGAGACAGATCC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCGGTCCCTCCCAGGGTaGCTTCCTATAGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSRSLPG*LPIGPL
Trigger: AAGTGGACCTATAGGAAGCAACCCTGGGAGGGACCG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGCACAAGCCCAGAGGGTaGCCCGGGTGGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMHKPRG*PGWWTM
Trigger: CATGGTCCACCACCCGGGCAACCCTCTGGGCTTGTG...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCATGCAGTGGTTCCCCTaGACCACAGTACAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSMQWFP*TTVQEA
Trigger: TGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCAT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGCCCAAGCCCTGGGGATaGATAGCCTCAATGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRPKPWG*IASMPA
Trigger: TGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGG...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCGGATCTGTCTCTGGCTaGGCCATGCCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGGSVSG*AMPGMW
Trigger: CCACATGCCTGGCATGGCCAAGCCAGAGACAGATCC...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAGACCTGCTGACAACTaGCTCTCTGTGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGERPADN*LSVGSC
Trigger: ACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTCT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS CCA 90 bp CACAAGGGCCCAGCCATGTATGAGAACAGGATGACCAGCTTCCCGTaGGTCATGGTCATGAGAGTCTGGTGTCCCGAGGCCCAGATGCGA +
Preference number: 5 (lower is better)
Translates to: HKGPAMYENRMTSFP*VMVMRVWCPEAQMR
Trigger: TCGCATCTGGGCCTCGGGACACCAGACTCTCATGACCATGACCCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAACTAAGAGCAGATTCTaGCTCAGGCTCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGTKSRF*LRLSLP
Trigger: AGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAGT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCGGCTGGGGAACTGGCTaGGCACTGACAGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVGWGTG*ALTGKP
Trigger: GGGCTTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCC...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCCTGGGTCTCTGCTATTaGGAGTGGATGCCACAAGTT +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSLGLCY*EWMPQV
Trigger: AACTTGTGGCATCCACTCCAAATAGCAGAGACCCAG...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAGTGCTGGCTCTAACTaGTCCCCACGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSAGSN*SPRLSG
Trigger: CCCAGACAGCCGTGGGGACAAGTTAGAGCCAGCACT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAACTAAGAGCAGATTCTaGCTCAGGCTCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGETKSRF*LRLSLP
Trigger: AGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAGT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGCCGGACACAGCATGTaGTTCAAATTCACTTCGGTG +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGEAGHSM*FKFTSV
Trigger: CACCGAAGTGAATTTGAACAACATGCTGTGTCCGGC...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCCCCAAGCCCTGGGGATaGATAGCCTCAATGCCCGCA +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLPKPWG*IASMPA
Trigger: TGCGGGCATTGAGGCTATCAATCCCCAGGGCTTGGG...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAAGAGCAAAGGCAAGCTaGTGGAGGATGTCAACATGG +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGERAKAS*WRMSTW
Trigger: CCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCT...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAATTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 5 (lower is better)
Translates to: TRRAPTRWQMAHGNLAGELLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...TTCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTGCCAAGAGTCTGGTaGGGTTGCTTCTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLPRVW*GCFSPR
Trigger: ACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAGGCTGGGGAACTGGCTaGGCACTGACAGGAAAGCCC +
Preference number: 5 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGGWGTG*ALTGKP
Trigger: GGGCTTTCCTGTCAGTGCCAAGCCAGTTCCCCAGCC...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGAAGGAACATGTTACTGTaGTGCCTCTGGGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGRNMLL*CLWEED
Trigger: ATCTTCCTCCCAGAGGCACAACAGTAACATGTTCCT...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTATGTGCATCTGTAGCTaGAAGACGACGATAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAMCICS*KTTIAP
Trigger: GGGAGCTATCGTCGTCTTCAAGCTACAGATGCACAT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS TCA 90 bp GTGTCCCGAGGCCCAGATGCGATACCAGGGGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCATGTTGTTCAAATTCACTTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: VSRGPDAIPGAVEWV*DGRTQHVVQIHFGD
Trigger: GTCACCGAAGTGAATTTGAACAACATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS CCA 90 bp ATTGGGGCTGGCTGGCCTAGCTTGTCTGACTCCTTCCCTGTCATTTaGCACGGTGGGCTCCCTTATGCAGGTATACTCTGCCTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: IGAGWPSLSDSFPVI*HGGLPYAGILCLFP
Trigger: AGGGAAGAGGCAGAGTATACCTGCATAAGGGAGCCCACCGTGCCAAATGACAGGGAAGGAGTCAGACAAGCTAGGCCAGCCAGCCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCACAAGCCCAGAGGGTaGCCCGGGTGGTGGACCATG +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMHKPRG*PGWWTM
Trigger: CATGGTCCACCACCCGGGCAACCCTCTGGGCTTGTG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGATGCAGTGGTTCCCCTaGACCACAGTACAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRMQWFP*TTVQEA
Trigger: TGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCAT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGGATCTGTCTCTGGCTaGGCCATGCCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHGSVSG*AMPGMW
Trigger: CCACATGCCTGGCATGGCCAAGCCAGAGACAGATCC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS CCA 90 bp ATGCAGTGGTTCCCCTTGACCACAGTACAGGAAGCAAGAGTGAGATaGAACACAAGCCCAGAGGGTTGCCCGGGTGGTGGACCATGTAAG +
Preference number: 5 (lower is better)
Translates to: MQWFPLTTVQEARVR*NTSPEGCPGGGPCK
Trigger: CTTACATGGTCCACCACCCGGGCAACCCTCTGGGCTTGTGTTCCATCTCACTCTTGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS CCA 90 bp CTCATGTCCCACAAACCATCTGTCCCAAGAGAGAGCTCAACAAAGTaGGTCCCCTTCTGGTCAAGAAGCAGAAGCCTTGCCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LMSHKPSVPRESSTK*VPFWSRSRSLAWPG
Trigger: CCCAGGCCAGGCAAGGCTTCTGCTTCTTGACCAGAAGGGGACCCACTTTGTTGAGCTCTCTCTTGGGACAGATGGTTTGTGGGACATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHTNEAG*KGAVGQ
Trigger: TTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGTNEAG*KGAVGQ
Trigger: TTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGTGCTGGCTCTAACTaGTCCCCACGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPSAGSN*SPRLSG
Trigger: CCCAGACAGCCGTGGGGACAAGTTAGAGCCAGCACT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCTTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CACGCGCAGAGCTCCCACACGCTGGCAAATGGCACACGGAAACCTGGCTGGGGATGGGCCAGATCATCTTaGGTGTACAAAACCAAATAC +
Preference number: 5 (lower is better)
Translates to: HAQSSHTLANGTRKPGWGWARSS*VYKTKY
Trigger: GTATTTGGTTTTGTACACCAAAGATGATCTGGCCCA...TCCCCAGCCAGGTTTCCGTGTGCCATTTGCCAGCGTGTGGGAGCTCTGCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCTGGGCCAGATCATCTTaGGTGTACAAAACCAAATAC +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSWARSS*VYKTKY
Trigger: GTATTTGGTTTTGTACACCAAAGATGATCTGGCCCA...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCAGCGCCCAGCACTACACCCCAGGCTCAAGGAGACATCGTAGGGGGAAGAGCTATCAGCGTCAGTGTCTaGTCTAACAGCATCACACAT +
Preference number: 5 (lower is better)
Translates to: PAPSTTPQAQGDIVGGRAISVSV*SNSITH
Trigger: ATGTGTGATGCTGTTAGACAAGACACTGACGCTGAT...AGCTCTTCCCCCTACGATGTCTCCTTGAGCCTGGGGTGTAGTGCTGGGCGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCATTTTTCATGGGGCTTaGTCTGTTTCTTGCCATGAG +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSIFHGA*SVSCHE
Trigger: CTCATGGCAAGAAACAGACAAAGCCCCATGAAAAAT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGATGTGCATCTGTAGCTaGAAGACGACGATAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRMCICS*KTTIAP
Trigger: GGGAGCTATCGTCGTCTTCAAGCTACAGATGCACAT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS CCA 90 bp AAACCATCTGTCCCAAGAGAGAGCTCAACAAAGTGGGTCCCCTTCTaGTCAAGAAGCAGAAGCCTTGCCTGGCCTGGGTGGATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: KPSVPRESSTKWVPF*SRSRSLAWPGWMLQ
Trigger: CTGAAGCATCCACCCAGGCCAGGCAAGGCTTCTGCTTCTTGACCAGAAGGGGACCCACTTTGTTGAGCTCTCTCTTGGGACAGATGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCCTTCAGTCTATTTTCTaGGCTGGAAGCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGLQSIF*AGSRSK
Trigger: TTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAG...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTCTAGGTCAACTGTGTaGCCTAGAGTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHSRSTV*PRVGQG
Trigger: CCCCTGTCCCACTCTAGGCAACACAGTTGACCTAGA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCGGTCCCTCCCAGGGTaGCTTCCTATAGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRSLPG*LPIGPL
Trigger: AAGTGGACCTATAGGAAGCAACCCTGGGAGGGACCG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGAPSIL*TYMFLS
Trigger: GCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGC...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCACTGCCAAGAGTCTGGTaGGGTTGCTTCTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: RQSKGKLVEDVNMGKARALPRVW*GCFSPR
Trigger: ACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCAG...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAGACCTGCTGACAACTaGCTCTCTGTGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHRPADN*LSVGSC
Trigger: ACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTCT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGATGTGCATCTGTAGCTaGAAGACGACGATAGCTCCC +
Preference number: 5 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMMCICS*KTTIAP
Trigger: GGGAGCTATCGTCGTCTTCAAGCTACAGATGCACAT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS GCA 90 bp TTCCCTGTCATTTGGCACGGTGGGCTCCCTTATGCAGGTATACTCTaGCTCTTCCCTCTCATGTCCCACAAACCATCTGTCCCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: FPVIWHGGLPYAGIL*LFPLMSHKPSVPRE
Trigger: CTCTCTTGGGACAGATGGTTTGTGGGACATGAGAGGGAAGAGGCAGAGTATACCTGCATAAGGGAGCCCACCGTGCCAAATGACAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAATGCAGTGGTTCCCCTaGACCACAGTACAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGMQWFP*TTVQEA
Trigger: TGCTTCCTGTACTGTGGTCAAGGGGAACCACTGCAT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: SKGKLVEDVNMGKARATRGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCCGCAGGCCTCTGCAGAAGGACGGTCCCTCCCAGGGTTGCTTCCTATAGGTCCAGTACTGTATATATCTaGACCCTCTTCACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: PAGLCRRTVPPRVASYRSSTVYI*TLFTLD
Trigger: ATCCAAAGTGAAGAGGGTCAAGATATATACAGTACT...GGACCTATAGGAAGCAACCCTGGGAGGGACCGTCCTTCTGCAGAGGCCTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACTCTCTCCACGTTGGCTaGGCCCAAGATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHSLHVG*AQDKSE
Trigger: CTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGA...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGACAGAGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCATCTCTCCACGTTGGCTaGGCCCAAGATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: RQSKGKLVEDVNMGKARASLHVG*AQDKSE
Trigger: CTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGA...TGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GGCACAGATCCTCTGCTGGCAGCAACTCCAAGTTCTGGTGGAGGACAGACCAGGATCAGCGTCAGTGTCTaGTCTAACAGCATCACACAT +
Preference number: 5 (lower is better)
Translates to: GTDPLLAATPSSGGGQTRISVSV*SNSITH
Trigger: ATGTGTGATGCTGTTAGACAAGACACTGACGCTGAT...CCTGGTCTGTCCTCCACCAGAACTTGGAGTTGCTGCCAGCAGAGGATCTGTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS TCA 90 bp GAGGATCTGCAAGACGCTGAAGTGATAAAAGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAAACTGCTGAGGGGCTCTGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: EDLQDAEVIKEHEAS*EKSPPETAEGLWSV
Trigger: TACACTCCAGAGCCCCTCAGCAGTTTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACTTCAGCGTCTTGCAGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS TCA 90 bp CCGGAGCAAATCCAGCAGATATTTACACAAGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTTCCCGTGGGTCATGGTCATGAGAGT +
Preference number: 5 (lower is better)
Translates to: PEQIQQIFTQGPSHV*EQDDQLPVGHGHES
Trigger: ACTCTCATGACCATGACCCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCCTTGTGTAAATATCTGCTGGATTTGCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS CCA 90 bp TCCACCTTGTTGGAGGAGGTAGGGAAATCATTGTGTTCTTCTGCATaGGCCAGACAGCCACTCACATCAACCCAGGGAGTTCAGGACACA +
Preference number: 5 (lower is better)
Translates to: STLLEEVGKSLCSSA*ARQPLTSTQGVQDT
Trigger: TGTGTCCTGAACTCCCTGGGTTGATGTGAGTGGCTGTCTGGCCCATGCAGAAGAACACAATGATTTCCCTACCTCCTCCAACAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGAACTAAGAGCAGATTCTaGCTCAGGCTCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGTKSRF*LRLSLP
Trigger: AGGCAAGGAGAGCCTGAGCAAGAATCTGCTCTTAGT...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACGCCGGACACAGCATGTaGTTCAAATTCACTTCGGTG +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHAGHSM*FKFTSV
Trigger: CACCGAAGTGAATTTGAACAACATGCTGTGTCCGGC...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGCCGGACACAGCATGTaGTTCAAATTCACTTCGGTG +
Preference number: 5 (lower is better)
Translates to: PATLQAASMNAMKFEEREAGHSM*FKFTSV
Trigger: CACCGAAGTGAATTTGAACAACATGCTGTGTCCGGC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLAPSIL*TYMFLS
Trigger: GCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGC...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGAGAGAGCCAAAGGGAAGGAGGAAAATCCAGCGCCCAGCACTACACCCCAGGCTGGGCCAGATCATCTTaGGTGTACAAAACCAAATAC +
Preference number: 5 (lower is better)
Translates to: RESQREGGKSSAQHYTPGWARSS*VYKTKY
Trigger: GTATTTGGTTTTGTACACCAAAGATGATCTGGCCCA...GCCTGGGGTGTAGTGCTGGGCGCTGGATTTTCCTCCTTCCCTTTGGCTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGCAAAGGCAAGCTTGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGAGGAACATGTTACTGTaGTGCCTCTGGGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SKGKLVEDVNMGKARATRRNMLL*CLWEED
Trigger: ATCTTCCTCCCAGAGGCACAACAGTAACATGTTCCT...CCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACAAGCTTGCCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TGTGGAGGATGTCAACATGGGGAAGGCTCGAGCAACCAGGCAACCTGTGCCATGATCAGCGTCAGTGTCTaGTCTAACAGCATCACACAT +
Preference number: 5 (lower is better)
Translates to: CGGCQHGEGSSNQATCAMISVSV*SNSITH
Trigger: ATGTGTGATGCTGTTAGACAAGACACTGACGCTGAT...CATGGCACAGGTTGCCTGGTTGCTCGAGCCTTCCCCATGTTGACATCCTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: QNLPEMGPDARILQTQKPTNEAG*KGAVGQ
Trigger: TTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTGTTGTGCCTCTGGGACTTCAGTCTATTTTCTaGGCTGGAAGCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: PACLHRLTEEHVTVVPLGLQSIF*AGSRSK
Trigger: TTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAG...TCCCAGAGGCACAACAGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGGCCCCCTCTATTCTTTaGACCTACATGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: PATLQAASMNAMKFEEREAPSIL*TYMFLS
Trigger: GCTCAGAAACATGTAGGTCAAAAGAATAGAGGGGGC...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACAGGAACATGTTACTGTaGTGCCTCTGGGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHRNMLL*CLWEED
Trigger: ATCTTCCTCCCAGAGGCACAACAGTAACATGTTCCT...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GTACAAAACCAAATACTGAGGGCAGGGAGGACCAGAAGCAGGCGTGACTGGGTCATCAGCGTCAGTGTCTaGTCTAACAGCATCACACAT +
Preference number: 5 (lower is better)
Translates to: VQNQILRAGRTRSRRDWVISVSV*SNSITH
Trigger: ATGTGTGATGCTGTTAGACAAGACACTGACGCTGAT...GACCCAGTCACGCCTGCTTCTGGTCCTCCCTGCCCTCAGTATTTGGTTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGCCGGACACAGCATGTaGTTCAAATTCACTTCGGTG +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMAGHSM*FKFTSV
Trigger: CACCGAAGTGAATTTGAACAACATGCTGTGTCCGGC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCTTCAGTCTATTTTCTaGGCTGGAAGCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTLQSIF*AGSRSK
Trigger: TTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGGGTTGGCTGTTTACTTaGAGTCATGGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMGWLFT*SHGTPV
Trigger: CACTGGTGTCCCATGACTCAAAGTAAACAGCCAACC...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACGGTCCCTCCCAGGGTaGCTTCCTATAGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: NNSALSVDTLKKSGPRETRSLPG*LPIGPL
Trigger: AAGTGGACCTATAGGAAGCAACCCTGGGAGGGACCG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGAGAGCAAAGGCAAGCTaGTGGAGGATGTCAACATGG +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMRAKAS*WRMSTW
Trigger: CCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GTAGAAACCAGTAAGAAAATCCTCTTCAGGAGGGGACAGAGGACTCTGGGTCAATCTCTCCACGTTGGCTaGGCCCAAGATAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VETSKKILFRRGQRTLGQSLHVG*AQDKSE
Trigger: CTCACTCTTATCTTGGGCCAAGCCAACGTGGAGAGA...TTGACCCAGAGTCCTCTGTCCCCTCCTGAAGAGGATTTTCTTACTGGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGTTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMLLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AGCTCACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCAGGAACATGTTACTGTaGTGCCTCTGGGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SSLYIHKRRAASLSLTLPRNMLL*CLWEED
Trigger: ATCTTCCTCCCAGAGGCACAACAGTAACATGTTCCT...GGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GACCAGAATCTGGCTGGTTCTGTCTTGACCACGAGCTGTGAAATCCCTCGGCTCATTTTTCATGGGGCTTaGTCTGTTTCTTGCCATGAG +
Preference number: 5 (lower is better)
Translates to: DQNLAGSVLTTSCEIPRLIFHGA*SVSCHE
Trigger: CTCATGGCAAGAAACAGACAAAGCCCCATGAAAAAT...GAGCCGAGGGATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAGATTCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGCTTCAGTCTATTTTCTaGGCTGGAAGCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMLQSIF*AGSRSK
Trigger: TTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAG...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CCGGCGACCCTGCAAGCAGCTTCTATGAATGCGATGAAGTTTGAGGAGAGAGAGTGGGCCAGATCATCTTaGGTGTACAAAACCAAATAC +
Preference number: 5 (lower is better)
Translates to: PATLQAASMNAMKFEEREWARSS*VYKTKY
Trigger: GTATTTGGTTTTGTACACCAAAGATGATCTGGCCCA...CTCTCTCTCCTCAAACTTCATCGCATTCATAGAAGCTGCTTGCAGGGTCGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACTCTATATACACAAAAGGAGGGCTGCCTCCCTGTCACTGACTCTACCCGCCACCAAAAGAACTACTACTaGTTGTTCCCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TLYTQKEGCLPVTDSTRHQKNYY*LFPFSS
Trigger: TGAGGAGAAAGGGAACAACAAGTAGTAGTTCTTTTG...GTGGCGGGTAGAGTCAGTGACAGGGAGGCAGCCCTCCTTTTGTGTATATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCACAACCCAATCTCATaGCTTCGATGCCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFHNPIS*LRCQKN
Trigger: GTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCAAGAGCAAAGGCAAGCTaGTGGAGGATGTCAACATGG +
Preference number: 5 (lower is better)
Translates to: QNLPEMGPDARILQTQKPRAKAS*WRMSTW
Trigger: CCATGTTGACATCCTCCACAAGCTTGCCTTTGCTCT...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACAAAGAGTCTGGTTGGGTaGCTTCTCTCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: NNSALSVDTLKKSGPRETKSLVG*LLSTLA
Trigger: AGCCAACGTGGAGAGAAGCAACCCAACCAGACTCTT...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CAGAATCTTCCAGAAATGGGCCCTGATGCGAGGATTCTCCAAACTCAAAAACCACTGGGTCTCTGCTATTaGGAGTGGATGCCACAAGTT +
Preference number: 5 (lower is better)
Translates to: QNLPEMGPDARILQTQKPLGLCY*EWMPQV
Trigger: AACTTGTGGCATCCACTCCAAATAGCAGAGACCCAG...TGGTTTTTGAGTTTGGAGAATCCTCGCATCAGGGCCCATTTCTGGAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTATTTTTCATGGGGCTTaGTCTGTTTCTTGCCATGAG +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTIFHGA*SVSCHE
Trigger: CTCATGGCAAGAAACAGACAAAGCCCCATGAAAAAT...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS CCA 90 bp ACTTCTGGAGTCACCAGAGTCATGCCAGCAGCCTTCCTGAGCTTCTaGAATACCCAAGACACTTCCAACATGCTAAACAGAGATGTAAAA +
Preference number: 5 (lower is better)
Translates to: TSGVTRVMPAAFLSF*NTQDTSNMLNRDVK
Trigger: TTTTACATCTCTGTTTAGCATGTTGGAAGTGTCTTGGGTATTCCAGAAGCTCAGGAAGGCTGCTGGCATGACTCTGGTGACTCCAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461715.1
CDS-3UTR CAA 90 bp CTGTGGCTTCAGAACCCTGCATGCCTTCACAGGCTGACAGAGGAACATGTTACTCAAAAGAACTACTACTaGTTGTTCCCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LWLQNPACLHRLTEEHVTQKNYY*LFPFSS
Trigger: TGAGGAGAAAGGGAACAACAAGTAGTAGTTCTTTTG...AGTAACATGTTCCTCTGTCAGCCTGTGAAGGCATGCAGGGTTCTGAAGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTCTGCCAAGAGTCTGGTaGGGTTGCTTCTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALLPRVW*GCFSPR
Trigger: ACGTGGAGAGAAGCAACCCAACCAGACTCTTGGCAG...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGAGACCTGCTGACAACTaGCTCTCTGTGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWRPADN*LSVGSC
Trigger: ACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTCT...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGACCTGCTGACAACTaGCTCTCTGTGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRPADN*LSVGSC
Trigger: ACAGCTCCCCACAGAGAGCAAGTTGTCAGCAGGTCT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ATACAGGCCATGGCTCCTTGTGAAGCCTATAGACTGGGCCCCCTCTATTCTTTTCAAAAGAACTACTACTaGTTGTTCCCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: IQAMAPCEAYRLGPLYSFQKNYY*LFPFSS
Trigger: TGAGGAGAAAGGGAACAACAAGTAGTAGTTCTTTTG...AAAAGAATAGAGGGGGCCCAGTCTATAGGCTTCACAAGGAGCCATGGCCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWLAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCCTACATGTAGCAGTTaGACGGTGGGCAGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: ETQPNLIASMPKELLLVVPTCSS*TVGRAN
Trigger: ATTGGCCCTGCCCACCGTCAAACTGCTACATGTAGG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGGGGCACTGAGGCCTaGTGTATTTCCTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALRGTEA*CISSSA
Trigger: AGCTGATGAGGAAATACACAAGGCCTCAGTGCCCCT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCTGGCTGGTTCTGTCTaGACCACGAGCTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: ETQPNLIASMPKELLLVVLAGSV*TTSCEI
Trigger: GATTTCACAGCTCGTGGTCAAGACAGAACCAGCCAG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp ACCTCCACCCATGAGGACTTAATTCTTTGGCAGCCCCCTTTCAACCTAGACATGAGTACTGTATATATCTaGACCCTCTTCACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: TSTHEDLILWQPPFNLDMSTVYI*TLFTLD
Trigger: ATCCAAAGTGAAGAGGGTCAAGATATATACAGTACT...CATGTCTAGGTTGAAAGGGGGCTGCCAAAGAATTAAGTCCTCATGGGTGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTTTGCTTCTCTCCACGTaGGCTTGGCCCAAGATAAGA +
Preference number: 5 (lower is better)
Translates to: ETQPNLIASMPKELLLVVLLLST*AWPKIR
Trigger: TCTTATCTTGGGCCAAGCCAACGTGGAGAGAAGCAA...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTCTGGGTCTCTGCTATTaGGAGTGGATGCCACAAGTT +
Preference number: 5 (lower is better)
Translates to: ETQPNLIASMPKELLLVVLGLCY*EWMPQV
Trigger: AACTTGTGGCATCCACTCCAAATAGCAGAGACCCAG...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp GAAACACAACCCAATCTCATTGCTTCGATGCCAAAAGAACTACTACTTGTTGTTAAGTCAAGTCACGACTaGCTTCCTCAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ETQPNLIASMPKELLLVVKSSHD*LPQGGK
Trigger: TTTTCCTCCCTGAGGAAGCAAGTCGTGACTTGACTT...AACAACAAGTAGTAGTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AACAATTCAGCACTGAGTGTGGATACACTGAAGAAATCTGGCCCTAGGGAAACACAAAAGAACTACTACTaGTTGTTCCCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: NNSALSVDTLKKSGPRETQKNYY*LFPFSS
Trigger: TGAGGAGAAAGGGAACAACAAGTAGTAGTTCTTTTG...TGTTTCCCTAGGGCCAGATTTCTTCAGTGTATCCACACTCAGTGCTGAATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp AAGAAATACACCAAACATCCTACTGCCCTCTCCCATGATTTTATCAAGAACTGGCACAACCCAATCTCATaGCTTCGATGCCAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KKYTKHPTALSHDFIKNWHNPIS*LRCQKN
Trigger: GTTCTTTTGGCATCGAAGCAATGAGATTGGGTTGTG...CCAGTTCTTGATAAAATCATGGGAGAGGGCAGTAGGATGTTTGGTGTATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS-3UTR CAA 90 bp TTTGGATTTGTCATTGCAATAGATCTCCAACCCTCTCAATGGAATCTAGCCCTTAGTACTGTATATATCTaGACCCTCTTCACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: FGFVIAIDLQPSQWNLALSTVYI*TLFTLD
Trigger: ATCCAAAGTGAAGAGGGTCAAGATATATACAGTACT...AAGGGCTAGATTCCATTGAGAGGGTTGGAGATCTATTGCAATGACAAATCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
CDS GCA 72 bp GCCGTTGGCCAATTCCTGCAACCGCGTGGCCGTCTCTaGCCCCAGCTAGCAACTTCGCCGCCGACGGGCCCC +
Preference number: 6 (lower is better)
Translates to: AVGQFLQPRGRL*PQLATSPPTGP
Trigger: GGGGCCCGTCGGCGGCGAAGTTGCTAGCTGGGGGCAGAGACGGCCACGCGGTTGCAGGAATTGGCCAACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS TCA 72 bp CCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAATCGGCAGCTCGGCCCG +
Preference number: 6 (lower is better)
Translates to: PALLQWPPTRQG*KEPLANRQLGP
Trigger: CGGGCCGAGCTGCCGATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497754.1
CDS CAA 72 bp CCCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAATCGGCAGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: PRASPVATNEAG*KGAVGQSAARP
Trigger: GGGCCGAGCTGCCGATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497754.1
CDS GCA 72 bp TGGCTGCCAGGGCTACCCCTACCGTCCTCCTTCGTCTaGCTCAGGATGTGCCGCAGGGCCACCAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: WLPGLPLPSSFV*LRMCRRATRIS
Trigger: GGAGATCCTGGTGGCCCTGCGGCACATCCTGAGGCAGACGAAGGAGGACGGTAGGGGTAGCCCTGGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
ENST00000471255.5
CDS CCA 72 bp TTGCCTTCCTCTGGCCGCTGGGTCACCTGCTCTGGCTaGCTGCCAGGGCTACCCCTACCGTCCTCCTTCGTC +
Preference number: 6 (lower is better)
Translates to: LPSSGRWVTCSG*LPGLPLPSSFV
Trigger: GACGAAGGAGGACGGTAGGGGTAGCCCTGGCAGCCAGCCAGAGCAGGTGACCCAGCGGCCAGAGGAAGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
ENST00000471255.5
CDS GCA 72 bp AGGGTCAGGACCACCACACTTTCCAGCAGCCGCTGCTaGCAAGAGAGGAAGGCAGCACAGTCGGGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: RVRTTTLSSSRC*QERKAAQSGPP
Trigger: TGGGGGCCCCGACTGTGCTGCCTTCCTCTCTTGGCAGCAGCGGCTGCTGGAAAGTGTGGTGGTCCTGACCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS TCA 72 bp CCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAATTCCTGCAACCGCGTG +
Preference number: 6 (lower is better)
Translates to: PALLQWPPTRQG*KEPLANSCNRV
Trigger: CACGCGGTTGCAGGAATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS CCA 72 bp GTTGAAAGGAGCCGTTGGCCAATTCCTGCAACCGCGTaGCCGTCTCTGCCCCCAGCTAGCAACTTCGCCGCC +
Preference number: 6 (lower is better)
Translates to: VERSRWPIPATA*PSLPPASNFAA
Trigger: GGCGGCGAAGTTGCTAGCTGGGGGCAGAGACGGCCACGCGGTTGCAGGAATTGGCCAACGGCTCCTTTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS CAA 72 bp CCCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAATTCGCCACAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PRASPVATNEAG*KGAVGQFATEG
Trigger: TCCCTCTGTGGCGAATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS CAA 72 bp CCCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTaGAAAGGAGCCGTTGGCCAATTCCTGCAACCGCGT +
Preference number: 6 (lower is better)
Translates to: PRASPVATNEAG*KGAVGQFLQPR
Trigger: ACGCGGTTGCAGGAATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372073.5
CDS TCA 72 bp CCCGCGCTTCTCCAGTGGCCACCAACGAGGCAGGGTTaGAAGGAGCCGTTGGCCAATTCGCCACAGAGGGAT +
Preference number: 6 (lower is better)
Translates to: PALLQWPPTRQG*KEPLANSPQRD
Trigger: ATCCCTCTGTGGCGAATTGGCCAACGGCTCCTTTCAACCCTGCCTCGTTGGTGGCCACTGGAGAAGCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288381.4
ENST00000372068.7
CDS CCA 72 bp ATGACCAGCTTCCCGTGGGTCATGGTCATGAGAGTCTaGTGTCCCGAGGCCCAGATGCGATACCAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: MTSFPWVMVMRV*CPEAQMRYQGP
Trigger: CGGCCCCTGGTATCGCATCTGGGCCTCGGGACACCAGACTCTCATGACCATGACCCACGGGAAGCTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS CCA 72 bp TTCCCCTTGACCACAGTACAGGAAGCAAGAGTGAGATaGAACACAAGCCCAGAGGGTTGCCCGGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: FPLTTVQEARVR*NTSPEGCPGGG
Trigger: TCCACCACCCGGGCAACCCTCTGGGCTTGTGTTCCATCTCACTCTTGCTTCCTGTACTGTGGTCAAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372073.5
CDS CCA 72 bp GGCTGGCCTAGCTTGTCTGACTCCTTCCCTGTCATTTaGCACGGTGGGCTCCCTTATGCAGGTATACTCTGC +
Preference number: 6 (lower is better)
Translates to: GWPSLSDSFPVI*HGGLPYAGILC
Trigger: GCAGAGTATACCTGCATAAGGGAGCCCACCGTGCCAAATGACAGGGAAGGAGTCAGACAAGCTAGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS TCA 72 bp GGCCCAGATGCGATACCAGGGGCCGTAGAATGGGTCTaGGATGGCCGGACACAGCATGTTGTTCAAATTCAC +
Preference number: 6 (lower is better)
Translates to: GPDAIPGAVEWV*DGRTQHVVQIH
Trigger: GTGAATTTGAACAACATGCTGTGTCCGGCCATCTCAGACCCATTCTACGGCCCCTGGTATCGCATCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS CAA 90 bp TGGGGAAAGAAAGAAACCAGAGCTATTGGGGCTGGCTGGCCTAGCTaGTCTGACTCCTTCCCTGTCATTTGGCACGGTGGGCTCCCTTAT +
Preference number: 6 (lower is better)
Translates to: WGKKETRAIGAGWPS*SDSFPVIWHGGLPY
Trigger: ATAAGGGAGCCCACCGTGCCAAATGACAGGGAAGGAGTCAGACAAGCTAGGCCAGCCAGCCCCAATAGCTCTGGTTTCTTTCTTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS TCA 72 bp CAAGACGCTGAAGTGATAAAAGAACATGAGGCCAGTTaGGAGAAGAGCCCACCGGAAACTGCTGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: QDAEVIKEHEAS*EKSPPETAEGL
Trigger: GAGCCCCTCAGCAGTTTCCGGTGGGCTCTTCTCTCAACTGGCCTCATGTTCTTTTATCACTTCAGCGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000461715.1
ENST00000464177.1
CDS GCA 72 bp ATTTGGCACGGTGGGCTCCCTTATGCAGGTATACTCTaGCTCTTCCCTCTCATGTCCCACAAACCATCTGTC +
Preference number: 6 (lower is better)
Translates to: IWHGGLPYAGIL*LFPLMSHKPSV
Trigger: GACAGATGGTTTGTGGGACATGAGAGGGAAGAGGCAGAGTATACCTGCATAAGGGAGCCCACCGTGCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CCA 72 bp CAGGCCAGGAGAAAGATCTTAGGTAAGGGACCAAGTTaGAGGCTGCACATAGTTACCCAGCATCAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: QARRKILGKGPS*RLHIVTQHQAH
Trigger: ATGGGCCTGATGCTGGGTAACTATGTGCAGCCTCCAACTTGGTCCCTTACCTAAGATCTTTCTCCTGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461715.1
CDS CCA 72 bp CACAAACCATCTGTCCCAAGAGAGAGCTCAACAAAGTaGGTCCCCTTCTGGTCAAGAAGCAGAAGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: HKPSVPRESSTK*VPFWSRSRSLA
Trigger: GGCAAGGCTTCTGCTTCTTGACCAGAAGGGGACCCACTTTGTTGAGCTCTCTCTTGGGACAGATGGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CCA 72 bp TGGGGAAAGAAAGAAACCAGAGCTATTGGGGCTGGCTaGCCTAGCTTGTCTGACTCCTTCCCTGTCATTTGG +
Preference number: 6 (lower is better)
Translates to: WGKKETRAIGAG*PSLSDSFPVIW
Trigger: CCAAATGACAGGGAAGGAGTCAGACAAGCTAGGCCAGCCAGCCCCAATAGCTCTGGTTTCTTTCTTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CAA 72 bp CAAAGTGGGTCCCCTTCTGGTCAAGAAGCAGAAGCCTaGCCTGGCCTGGGTGGATGCTTCAGTCTATTTTCT +
Preference number: 6 (lower is better)
Translates to: QSGSPSGQEAEA*PGLGGCFSLFS
Trigger: AGAAAATAGACTGAAGCATCCACCCAGGCCAGGCAAGGCTTCTGCTTCTTGACCAGAAGGGGACCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS TCA 72 bp ATCCAGCAGATATTTACACAAGGGCCCAGCCATGTATaGGAACAGGATGACCAGCTTCCCGTGGGTCATGGT +
Preference number: 6 (lower is better)
Translates to: IQQIFTQGPSHV*EQDDQLPVGHG
Trigger: ACCATGACCCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCCTTGTGTAAATATCTGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288381.4
ENST00000372068.7
ENST00000372072.7
ENST00000372073.5
ENST00000464177.1
CDS GCA 72 bp AAAGTGGGTCCCCTTCTGGTCAAGAAGCAGAAGCCTTaGCTGGCCTGGGTGGATGCTTCAGTCTATTTTCTT +
Preference number: 6 (lower is better)
Translates to: KVGPLLVKKQKP*LAWVDASVYFL
Trigger: AAGAAAATAGACTGAAGCATCCACCCAGGCCAGGCAAGGCTTCTGCTTCTTGACCAGAAGGGGACCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CCA 72 bp TTGGAGGAGGTAGGGAAATCATTGTGTTCTTCTGCATaGGCCAGACAGCCACTCACATCAACCCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: LEEVGKSLCSSA*ARQPLTSTQGV
Trigger: AACTCCCTGGGTTGATGTGAGTGGCTGTCTGGCCCATGCAGAAGAACACAATGATTTCCCTACCTCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CAA 72 bp CTTGCCTGGCCTGGGTGGATGCTTCAGTCTATTTTCTaGGCTGGAAGCCGGAGCAAATCCAGCAGATATTTA +
Preference number: 6 (lower is better)
Translates to: LAWPGWMLQSIF*AGSRSKSSRYL
Trigger: TAAATATCTGCTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAGCATCCACCCAGGCCAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CCA 72 bp CTGGCCTGGGTGGATGCTTCAGTCTATTTTCTTGGCTaGAAGCCGGAGCAAATCCAGCAGATATTTACACAA +
Preference number: 6 (lower is better)
Translates to: LAWVDASVYFLG*KPEQIQQIFTQ
Trigger: TTGTGTAAATATCTGCTGGATTTGCTCCGGCTTCCAGCCAAGAAAATAGACTGAAGCATCCACCCAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464177.1
CDS CCA 72 bp TCCAACATGCTAAACAGAGATGTAAAAATGCAACACTaGGCACCACAGTTAAATCTTACTTTTCTATACCCA +
Preference number: 6 (lower is better)
Translates to: SNMLNRDVKMQH*APQLNLTFLYP
Trigger: TGGGTATAGAAAAGTAAGATTTAACTGTGGTGCCCAGTGTTGCATTTTTACATCTCTGTTTAGCATGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461715.1