RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM129 (Homo sapiens)

Ensembl gene IDs: ENSG00000168936

Ensembl transcript IDs: ENST00000303277.6, ENST00000382936.8, ENST00000460722.1, ENST00000476253.1, ENST00000480360.1, ENST00000536901.1

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTaGCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGA +
Preference number: 1 (lower is better)
Translates to: PGCRSVRGRWGRARG*PARCQGAGGPGGWR
Trigger: TCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTGGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR CCA 90 bp AGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTaGGGCAGGGCACGCGGCTGGCCAGCCAGGTGTCAGGGCGCAGGG +
Preference number: 1 (lower is better)
Translates to: SARCTHPGCRSVRGR*GRARGWPARCQGAG
Trigger: CCCTGCGCCCTGACACCTGGCTGGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 90 bp CCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTaGGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCAGCCAGGTGTC +
Preference number: 1 (lower is better)
Translates to: PAHSAHGAHIQDAEA*AAGGAGHAAGQPGV
Trigger: GACACCTGGCTGGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 90 bp CCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCA +
Preference number: 1 (lower is better)
Translates to: PQGPSPLSARCTHPG*RSVRGRWGRARGWP
Trigger: TGGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 90 bp CAACAGCCTGCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGGCCCACCGGTCACGGGACCAGTAGT +
Preference number: 1 (lower is better)
Translates to: QQPASQTVGGRRGPG*APVGGRPTGHGTSS
Trigger: ACTACTGGTCCCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR TCA 90 bp GGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGCAGTAACACTGCTGGCACTCGCCTG +
Preference number: 1 (lower is better)
Translates to: GAGGPGGWRTTCPCR*GTTWGGSNTAGTRL
Trigger: CAGGCGAGTGCCAGCAGTGTTACTGCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR CCA 90 bp CCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTCACGGGACCAGTAGTAGATCAGGAT +
Preference number: 1 (lower is better)
Translates to: PARLWEGVEGQGARQ*VAGPPVTGPVVDQD
Trigger: ATCCTGATCTACTACTGGTCCCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR GCA 90 bp CTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATGACCACATGGGCTaGCCTGCGGATGGGTGCCCGGAGCTTCTCGCAGAGCTCCCCGTA +
Preference number: 1 (lower is better)
Translates to: LQEQVAQALVDDHMG*PADGCPELLAELPV
Trigger: TACGGGGAGCTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp GAACTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTaGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: ELSVDRGGNSLPARL*EGVEGQGARQWVAG
Trigger: GCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR TCA 90 bp GGGAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATaGCCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCGC +
Preference number: 1 (lower is better)
Translates to: GRQMSPGTGRPGSGG*PHGLPCGWVPGASR
Trigger: GCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR GCA 90 bp GCCCAGGCTCTGGTGGATGACCACATGGGCTGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAG +
Preference number: 1 (lower is better)
Translates to: AQALVDDHMGCPADG*PELLAELPVLSGVQ
Trigger: CTGAACTCCACTGAGTACGGGGAGCTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp GCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCC +
Preference number: 1 (lower is better)
Translates to: AQMTTTWGRPRVSRE*LGGRRCVCVCRICP
Trigger: GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR GCA 90 bp GCACCACATGGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTG +
Preference number: 1 (lower is better)
Translates to: APHGAAVTLLALACG*LLAGLHQLHAGTCL
Trigger: CAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGTGTTACTGCCGCCCCATGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 90 bp GCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCCTCCAGCTCCTGGCTGCTGGGCACT +
Preference number: 1 (lower is better)
Translates to: AASWQVFTSFTLARV*MQPMQASSSWLLGT
Trigger: AGTGCCCAGCAGCCAGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp AATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATGACCACATaGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCGCAGAGCTCC +
Preference number: 1 (lower is better)
Translates to: NVSRNRSPRLWWMTT*AALRMGARSFSQSS
Trigger: GGAGCTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp ACCAGGGAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTaGATGACCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGCTTC +
Preference number: 1 (lower is better)
Translates to: TREANVSRNRSPRLW*MTTWAALRMGARSF
Trigger: GAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGCCTCCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp TCTACCAGGGAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: STREANVSRNRSPRL*WMTTWAALRMGARS
Trigger: GCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGCCTCCCTGGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 90 bp GCAGCCCTTGAAACTCAGTTCAAAGCTAGGCCTGGCTCCCGGCCATaGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: AALETQFKARPGSRP*PLLPSPAERSRKPP
Trigger: GGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGAACTGAGTTTCAAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR CCA 90 bp GTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTaGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGC +
Preference number: 1 (lower is better)
Translates to: VCSREVRQMAQMTTT*GRPRVSREWLGGRR
Trigger: GCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR GCA 90 bp AAACTCAGTTCAAAGCTAGGCCTGGCTCCCGGCCATGGCCCCTGCTaGCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCCAAG +
Preference number: 1 (lower is better)
Translates to: KLSSKLGLAPGHGPC*LHLLSALGSLPNPK
Trigger: CTTGGGATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGAACTGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR GCA 90 bp TTGAAACTCAGTTCAAAGCTAGGCCTGGCTCCCGGCCATGGCCCCTaGTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCC +
Preference number: 1 (lower is better)
Translates to: LKLSSKLGLAPGHGP*CLHLLSALGSLPNP
Trigger: GGGATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGAACTGAGTTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR TCA 90 bp CTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATG +
Preference number: 1 (lower is better)
Translates to: LQDRAGECGPGLARN*GWVCSREVRQMAQM
Trigger: CATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR TCA 90 bp AAGCCCGCTCTGAGGAGGCTGATCAAATGTGGTGCATCCCAGAGCTaGAAAGTTATGTGCGAGAAAGGAAGCAAGTCTCAAAGAATGATG +
Preference number: 1 (lower is better)
Translates to: KPALRRLIKCGASQS*KVMCEKGSKSQRMM
Trigger: CATCATTCTTTGAGACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGATCAGCCTCCTCAGAGCGGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR CCA 90 bp TGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCGGTCCAGGCCTCAGGGGCCTaGCTGAGGGCGTGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: WEGVEGQGARQWVAGPPVQASGA*LRAWSR
Trigger: GCGGCTCCACGCCCTCAGCCAGGCCCCTGAGGCCTG...GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR TCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: TSRMQKRARQVGQGTRLATCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CCA 90 bp ACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCGCCTGGCTGAGGGCGTaGAGCCGCTTTTCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: TVGGRRGPGCAPVGGRPTAWLRA*SRFSEA
Trigger: GGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGC...GGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR CCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGGGGGGTCCTGGCGGCTaGCGAACCACTTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRGGPGG*RTTCPC
Trigger: GCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCC...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CCA 90 bp GGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTG +
Preference number: 2 (lower is better)
Translates to: GAAVTLLALACGCLLAGLGRRGS*RLANHL
Trigger: CAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCC...AAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGTGTTACTGCCGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR TCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCCTGAGTAGGCCGGGTTaGCCTCTACCAGGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: TSRMQKRARQVGQGTRLALSRPG*PLPGRQ
Trigger: TTGCCTCCCTGGTAGAGGTCAACCCGGCCTACTCAG...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR GCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGALACG*LLAGLH
Trigger: GTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCACATGGGCTGCCCTaGGGATGGGTGCCCGGAGCT +
Preference number: 2 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLPHGLP*GWVPGA
Trigger: AGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGCTGGCACTCGCCTGTaGCTGCCTCCTGGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEAGTRL*LPPGRS
Trigger: AGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGC...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCAGCTCCTGGCTGCTaGGCACTGAGTAGGCCGGGT +
Preference number: 2 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPPAPGC*ALSRPG
Trigger: ACCCGGCCTACTCAGTGCCCAGCAGCCAGGAGCTGG...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR TCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLTCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR TCA 90 bp TGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCGGTCGGTGCATCCCAGAGCTaGAAAGTTATGTGCGAGAAA +
Preference number: 2 (lower is better)
Translates to: WEGVEGQGARQWVAGPPVGASQS*KVMCEK
Trigger: TTTCTCGCACATAACTTTTCAGCTCTGGGATGCACC...GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR TCA 90 bp CTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGTACCTCAGGGGCCTGGCTaGGGGCGTGGAGCCGCTTTT +
Preference number: 2 (lower is better)
Translates to: LSVDRGGNSLPARLWEGVPQGPG*GRGAAF
Trigger: AAAAGCGGCTCCACGCCCTCAGCCAGGCCCCTGAGG...TACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR GCA 90 bp GCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTCTGAGCCTGGGAGAAGGAAGCCCCAGGACTaGTCCCACACCACAGCAGTG +
Preference number: 2 (lower is better)
Translates to: AHQRLDHRGRASPSEPGRRKPQD*SHTTAV
Trigger: CACTGCTGTGGTGTGGGAGCAGTCCTGGGGCTTCCT...TCTCCCAGGCTCAGAAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGATGACCACATGGGCTaGCCTGCGGATGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCDDHMG*PADGCP
Trigger: CGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATC...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATGCTGGCACTCGCCTGTaGCTGCCTCCTGGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDAGTRL*LPPGRS
Trigger: AGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGC...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGCTCCCCGTACTCAGTaGAGTTCAGCCTGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGAPRTQ*SSACRE
Trigger: CTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGC...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR TCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCACTGGCTGCTGGGCACTaGGTAGGCCGGGTTGACCTC +
Preference number: 2 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPLAAGH*VGRVDL
Trigger: GAGGTCAACCCGGCCTACTCAGTGCCCAGCAGCCAG...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR GCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCATGTGTGTGCAGGATCTaGCCCCACCAGCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EGALTCPPIATPPRNSPSCVCRI*PHQQER
Trigger: CCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACA...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
3UTR-3UTR CCA 90 bp CACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: HSAHGAHIQDAEACAAGGSPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...CCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR CCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGT +
Preference number: 2 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLRVSRE*LGGRRC
Trigger: ACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCT...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CCA 90 bp GAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTCAGATGACGACCACCTaGGGTAGACCCAGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: ELGKTPTRGLTTGGVHPLQMTTT*GRPRVS
Trigger: GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG...AAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EGALTCPPIATPPRNSPSNAVQV*HVTEGG
Trigger: CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATT...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
3UTR-3UTR CCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCATGGTGGATGACCACATaGGCTGCCCTGCGGATGGGT +
Preference number: 2 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAWWMTT*AALRMG
Trigger: ACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCA...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR TCA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGAGLARN*GWVCSR
Trigger: TCTGGAGCATACCCACCCTCAGTTACGTGCCAGACC...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR TCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGGLARN*GWVCSR
Trigger: TCTGGAGCATACCCACCCTCAGTTACGTGCCAGACC...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR GCA 90 bp GAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: ELGKTPTRGLTTGGVHPLLSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...AAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTGAGGCAAAGAGGAGGTaGCCAGGACTTGTACCCTGG +
Preference number: 2 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGAEAKRR*PGLVPW
Trigger: CCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTC...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp TCTTCACCAGCTTCACGCTGGCACGTGTCTGCATGCAGCCTATGCAGGCCTCCATGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSPASRWHVSACSLCRPPCPADG*PELLAE
Trigger: CTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCA...TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCT +
Preference number: 2 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDRSPRL*WMTTWA
Trigger: AGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCT...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR GCA 90 bp AACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: NHQELGKTPTRGLTTGGVLSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...CACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGLSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CCA 90 bp GCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTCTGAGCCTGGGAGAGTCGCTATGGCACTTTaGTCCTCAACTCAAACCCCC +
Preference number: 2 (lower is better)
Translates to: AHQRLDHRGRASPSEPGRVAMAL*SSTQTP
Trigger: GGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGAC...TCTCCCAGGCTCAGAAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR CAA 90 bp CCACCCCTACCCAGGAGTCTGAGACCTCGGCCTTCCCTGGACTTGTaGGGCAGAAAAAGGCACCAAGGACAGGATGAGAAACCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: PPLPRSLRPRPSLDL*GRKRHQGQDEKPGG
Trigger: CCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTCTCAGACTCCTGGGTAGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTT +
Preference number: 2 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPDLYPG*QAGWGV
Trigger: AACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTC...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR CCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: TGQENAVQVWHVTEGGYASPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR TCA 90 bp CCTGCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTACAATACGTAAGTGTTaGAAAAACTACAAAAGCCCG +
Preference number: 2 (lower is better)
Translates to: PASQTVGGRRGPGCAPVGTIRKC*KNYKSP
Trigger: CGGGCTTTTGTAGTTTTTTCAACACTTACGTATTGT...ACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR GCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTAGGGCAGAGGCGAGTTaGTCTACATCATGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCRAEAS*STSCAL
Trigger: TAAAGCACATGATGTAGAGCAACTCGCCTCTGCCCT...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR GCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCGACAGGGCAGGAGAATaGGGTCCAGGTCTGGCACGT +
Preference number: 2 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPDRAGE*GPGLAR
Trigger: ACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTC...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR-3UTR GCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLWHVSA*SLCRPP
Trigger: TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCA...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR GCA 90 bp AGGCCCACCGGTCACGGGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGAGCTGATCAAATGTGGTaGATCCCAGAGCTGAAAAGT +
Preference number: 2 (lower is better)
Translates to: RPTGHGTSSRSGCRRWRGADQMW*IPELKS
Trigger: ACTTTTCAGCTCTGGGATGCACCACATTTGATCAGC...TCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCCCGTGACCGGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR GCA 72 bp GCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGGCCCACCGGTCACGGG +
Preference number: 3 (lower is better)
Translates to: ASQTVGGRRGPG*APVGGRPTGHG
Trigger: CCCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR CCA 72 bp CGGCTGGCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTGCCCATGCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: RLASQVSGRRGS*RLANHLPMQVR
Trigger: CCTCACCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTGGCCAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 72 bp CCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGC +
Preference number: 3 (lower is better)
Translates to: PSPLSARCTHPG*RSVRGRWGRAR
Trigger: GCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR CCA 72 bp CTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTCACGGGACCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: LWEGVEGQGARQ*VAGPPVTGPVV
Trigger: TACTACTGGTCCCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR TCA 72 bp GGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGCAGTAACACTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GPGGWRTTCPCR*GTTWGGSNTAG
Trigger: GCCAGCAGTGTTACTGCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR GCA 72 bp GGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGC +
Preference number: 3 (lower is better)
Translates to: GAAVTLLALACG*LLAGLHQLHAG
Trigger: GCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGTGTTACTGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR CCA 72 bp AGGAACAGGTCGCCCAGGCTCTGGTGGATGACCACATaGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCG +
Preference number: 3 (lower is better)
Translates to: RNRSPRLWWMTT*AALRMGARSFS
Trigger: CGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CAA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCGGCTGGCGAACCACTaGCCCATGCAGGTGAGGCAC +
Preference number: 3 (lower is better)
Translates to: GASSRTGQENAVQVWHVTRLANH*PMQVRH
Trigger: GTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
3UTR-3UTR CAA 90 bp CAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGACGCCCACCAGAGGCTaGACCACAGGGGGCGTGCAT +
Preference number: 3 (lower is better)
Translates to: QAPGVHHLCLKQPSPGALTPTRG*TTGGVH
Trigger: ATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGT...CAAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR TCA 72 bp ATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATaGCCACATGGGCTGCCCTGCGGATGGGTGCCCGGA +
Preference number: 3 (lower is better)
Translates to: MSPGTGRPGSGG*PHGLPCGWVPG
Trigger: TCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR GCA 72 bp TCAAAGCTAGGCCTGGCTCCCGGCCATGGCCCCTGCTaGCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SKLGLAPGHGPC*LHLLSALGSLP
Trigger: TGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR GCA 72 bp CTGGTGGATGACCACATGGGCTGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGT +
Preference number: 3 (lower is better)
Translates to: LVDDHMGCPADG*PELLAELPVLS
Trigger: ACTGAGTACGGGGAGCTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 72 bp ACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: TTTWGRPRVSRE*LGGRRCVCVCR
Trigger: CCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR GCA 72 bp AGTTCAAAGCTAGGCCTGGCTCCCGGCCATGGCCCCTaGTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: SSKLGLAPGHGP*CLHLLSALGSL
Trigger: GAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR GCA 72 bp GGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATaGCCACATAGTAGCTCTGCACTTCCCCAGCCGGCC +
Preference number: 3 (lower is better)
Translates to: GRGAAFLKPQGT*PHSSSALPQPA
Trigger: GGCCGGCTGGGGAAGTGCAGAGCTACTATGTGGGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCACGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR CCA 72 bp GCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTaGATGACCACATGGGCTGCCCTGCGGATGGGTGCC +
Preference number: 3 (lower is better)
Translates to: ANVSRNRSPRLW*MTTWAALRMGA
Trigger: GGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 72 bp GGTCACGGGACCAGTAGTAGATCAGGATGCAGGCGATaGAGGGGAGGGTCACGGCCAGCAGCAGGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: GHGTSSRSGCRR*RGGSRPAAGRA
Trigger: GGCTCTTCCTGCTGCTGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCCCGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
3UTR-3UTR CAA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCGGAGGTGCCCAGGACTaGTACCCTGGCTGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAGGAQD*YPGCQA
Trigger: TGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCC...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR GCA 72 bp AGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCAGCTCCTGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: RSSPASRWHVSA*SLCRPPAPGCW
Trigger: CCAGCAGCCAGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CCA 72 bp GAAACTCAGTTCAAAGCTAGGCCTGGCTCCCGGCCATaGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: ETQFKARPGSRP*PLLPSPAERSR
Trigger: CCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGGCCTAGCTTTGAACTGAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR CCA 72 bp GAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCTGCCCTGCGGATGGGT +
Preference number: 3 (lower is better)
Translates to: EANVSRNRSPRL*WMTTWAALRMG
Trigger: ACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CAA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATGGACCCCTGGTGGGCTaGTGTTCTGGATGTCGCTAT +
Preference number: 3 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNGPLVG*CSGCRY
Trigger: ATAGCGACATCCAGAACACAAGCCCACCAGGGGTCC...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR TCA 72 bp CCAGCTCCTGGCTGCTGGGCACTGAGTAGGCCGGGTTaGCCTCTACCAGGGAGGCAAATGTCTCCAGGAACA +
Preference number: 3 (lower is better)
Translates to: PAPGCWALSRPG*PLPGRQMSPGT
Trigger: TGTTCCTGGAGACATTTGCCTCCCTGGTAGAGGTCAACCCGGCCTACTCAGTGCCCAGCAGCCAGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR-3UTR CAA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 3 (lower is better)
Translates to: GRRCVCVCRICPHQQERGQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR CCA 72 bp AGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTaGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGG +
Preference number: 3 (lower is better)
Translates to: REVRQMAQMTTT*GRPRVSREWLG
Trigger: CCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR CCA 72 bp AGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGGTATGCTCCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: SSRTGQENAVQV*HVTEGGYAPEK
Trigger: CTTCTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CAA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCACAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 3 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR CCA 72 bp AGGGAGGCAAAGAGGAGGTGCCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGGTGTTTTCATGAGGAT +
Preference number: 3 (lower is better)
Translates to: REAKRRCPGLVP*LPSRVGCFHED
Trigger: ATCCTCATGAAAACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR GCA 72 bp AGGCAAAGAGGAGGTGCCCAGGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTTTTCATGAGGATTGCT +
Preference number: 3 (lower is better)
Translates to: RQRGGAQDLYPG*QAGWGVFMRIA
Trigger: AGCAATCCTCATGAAAACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR CCA 72 bp TGGTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTaGTCCTCAACTCAAACCCCCACCCCTACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: WWACVLDVAMAL*SSTQTPTPTQE
Trigger: CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR TCA 72 bp AGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATG +
Preference number: 3 (lower is better)
Translates to: RAGECGPGLARN*GWVCSREVRQM
Trigger: CATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
3UTR-3UTR CAA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 3 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
3UTR TCA 72 bp CTGAGGAGGCTGATCAAATGTGGTGCATCCCAGAGCTaGAAAGTTATGTGCGAGAAAGGAAGCAAGTCTCAA +
Preference number: 3 (lower is better)
Translates to: LRRLIKCGASQS*KVMCEKGSKSQ
Trigger: TTGAGACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGATCAGCCTCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCCAGGCCTCAGGGGCCTaGCTGAGGGCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TSRMQKRARQVGQGTRLAQASGA*LRAWSR
Trigger: GCGGCTCCACGCCCTCAGCCAGGCCCCTGAGGCCTG...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp CCTGCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTCAGGCCTCAGGGGCCTaGCTGAGGGCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PASQTVGGRRGPGCAPVGQASGA*LRAWSR
Trigger: GCGGCTCCACGCCCTCAGCCAGGCCCCTGAGGCCTG...ACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp CCTGCCAGCCAGACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTC +
Preference number: 4 (lower is better)
Translates to: PASQTVGGRRGPGCAPVGQGARQ*VAGPPV
Trigger: GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTG...ACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp CAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATCGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPGVRAQGVLAAGEPLAHRRGPG*APVGGR
Trigger: CCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACG...ATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp GGGGCCTGGCTGAGGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATGCCCGTGCGCGCCAGTGGGTaGCAGGCCCACCGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GAWLRAWSRFSEAARHMPVRASG*QAHRSR
Trigger: CCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCAC...GGGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTC +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRQGARQ*VAGPPV
Trigger: GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTG...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGTGCGCGCCAGTGGGTaGCAGGCCCACCGGTCACGG +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGVRASG*QAHRSR
Trigger: CCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCAC...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCGTGCGCGCCAGTGGGTaGCAGGCCCACCGGTCACGG +
Preference number: 4 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGVRASG*QAHRSR
Trigger: CCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCAC...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCGCTGGCACTCGCCTGTaGCTGCCTCCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TSRMQKRARQVGQGTRLAAGTRL*LPPGRS
Trigger: AGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGC...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCGAGATGCAGTCCCCGTaGGGGTGCGGCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSRMQKRARQVGQGTRLAEMQSP*GCGLSS
Trigger: AGAAGAGAGGCCGCACCCGCACGGGGACTGCATCTC...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGGGCGCTCTGGGAGATaGAGTCCCCGTGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGGRSGR*SPRAGA
Trigger: CGCACCCGCACGGGGACTGCATCTCCCAGAGCGCCC...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCCACACGGGCACCTGGTaGACCGGTGGCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: ASQVSGRRGSWRLANHLPHTGTW*TGGKLV
Trigger: GACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTG...GGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp GCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCAGGAAGCCCCAGGACTaGTCCCACACCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASQVSGRRGSWRLANHLPRKPQD*SHTTAV
Trigger: CACTGCTGTGGTGTGGGAGCAGTCCTGGGGCTTCCT...GGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp ACTGTGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCCCAGCTTCAGGGCCCTaGTGGCCAGATCGAGGACAA +
Preference number: 4 (lower is better)
Translates to: TVGGRRGPGCAPVGGRPTPASGP*WPDRGQ
Trigger: TTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGG...GGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCACAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCCAGCTTCAGACACCCTaGCGTGCCCTCCACTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSRMQKRARQVGQGTRLAQLQTP*RALHSG
Trigger: TCCGGAGTGGAGGGCACGCCAGGGTGTCTGAAGCTG...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCACTTCTCGGCCGGCCCTaGAGGCGGCACCGCACCTGT +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSLLGRP*RRHRTC
Trigger: ACAGGTGCGGTGCCGCCTCCAGGGCCGGCCGAGAAG...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCGCTCGCGGGGCGCTCTaGGAGATGCAGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGARGAL*EMQSPC
Trigger: GCACGGGGACTGCATCTCCCAGAGCGCCCCGCGAGC...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGGRRGS*RLANHL
Trigger: CAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCC...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp GGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTGCAGGTTCTGCACCGTaGGCCCCGCCGCGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GAAVTLLALACGCLLAGLAGSAP*APPRGT
Trigger: AGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGC...AAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGTGTTACTGCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp ACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCGTGGAGCCGCTTTTCTaGAGCCGCAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: TSRMQKRARQVGQGTRLAVEPLF*SRKAHA
Trigger: GGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCAC...GGCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp AGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGCGCCCACCAGAGGCTTaGCCACAGGGGGCGTGCATC +
Preference number: 4 (lower is better)
Translates to: SPLSARCTHPGCRSVRGRRPPEA*PQGACI
Trigger: GATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCG...CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCACGCCCACCAGAGGCTTaGCCACAGGGGGCGTGCATC +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSRPPEA*PQGACI
Trigger: GATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCG...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTCAGTCCCCGTGCGGGTaGGGCCTCTCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCQSPCG*GLSSRP
Trigger: CGGCCGAGAAGAGAGGCCGCACCCGCACGGGGACTG...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTPDSRF*TVSPAA
Trigger: CGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGGAGGAGGCAACAGCCTaGCAGCCAGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VHTSRMQKRARQVGQGTREEATA*QPDCGR
Trigger: CCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTC...CCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp GCCAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCTCTGGCGAGAGCTCATaGTGCCGAGACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: ASQVSGRRGSWRLANHLPSGESS*CRDSVT
Trigger: TGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGA...GGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp CACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCTGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HIQDAEACAAGGAGHAAGCTHPG*RSVRGR
Trigger: CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCA...GCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp CACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCTGGCCCCACACCACAGCAGTaGCCTCTTCTCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: HIQDAEACAAGGAGHAAGPTPQQ*PLLHPT
Trigger: GGTGGGATGGAGAAGAGGGCACTGCTGTGGTGTGGG...GCCAGCCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCCCACATGGGCTGCCCTaGGGATGGGTGCCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGPHGLP*GWVPGA
Trigger: AGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGG...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCGCTCGCGGGGCGCTCTaGGAGATGCAGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGARGAL*EMQSPC
Trigger: GCACGGGGACTGCATCTCCCAGAGCGCCCCGCGAGC...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGCTCGCGGGGCGCTCTaGGAGATGCAGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEARGAL*EMQSPC
Trigger: GCACGGGGACTGCATCTCCCAGAGCGCCCCGCGAGC...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGGCCTGGCTGAGGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATGCCCGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: GAWLRAWSRFSEAARHMPVSPAA*NSLGVN
Trigger: GTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCAC...GGGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRSGTTA*RPCGAS
Trigger: ACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACT...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGCGGCAGCAGCGAGTaGCACAACAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGSGSSE*HNSVAA
Trigger: GGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCT...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCAGGCCTCAGGGGCCTaGCTGAGGGCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLQASGA*LRAWSR
Trigger: GCGGCTCCACGCCCTCAGCCAGGCCCCTGAGGCCTG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGCAGGCCTCAGGGGCCTaGCTGAGGGCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGQASGA*LRAWSR
Trigger: GCGGCTCCACGCCCTCAGCCAGGCCCCTGAGGCCTG...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: LLALACGCLLAGLHQLHAGRRGS*RLANHL
Trigger: CAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCC...AGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTCTGAGCCTGGGAGACCTGGCTCCCGGCCATaGCCCCTGCTGCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: AHQRLDHRGRASPSEPGRPGSRP*PLLPSP
Trigger: AGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGG...TCTCCCAGGCTCAGAAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCGGGCTGCCCTGCGGATaGGTGCCCGGAGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPGLPCG*VPGASR
Trigger: GCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCC...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGCAGGTTCTGCACCGTaGGCCCCGCCGCGTGGAACT +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAAGSAP*APPRGT
Trigger: AGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGC...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAACCTCAGGGGCCTGGCTaGGGGCGTGGAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEPQGPG*GRGAAF
Trigger: AAAAGCGGCTCCACGCCCTCAGCCAGGCCCCTGAGG...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGACCTCAGGGGCCTGGCTaGGGGCGTGGAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGPQGPG*GRGAAF
Trigger: AAAAGCGGCTCCACGCCCTCAGCCAGGCCCCTGAGG...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCCTCAGGGGCCTGGCTaGGGGCGTGGAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGPQGPG*GRGAAF
Trigger: AAAAGCGGCTCCACGCCCTCAGCCAGGCCCCTGAGG...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp CACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSAHGAHIQDAEACAAGGTCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...CCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR TCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGGCACCAAGGACAGGATaGGAAACCCGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRAPRTG*ETRRGS
Trigger: GCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGC...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp TGCCCTGCGGATGGGTGCCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGACTGGCTGCTGGGCACTaGGTAGGCCGGGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: CPADGCPELLAELPVLSGLAAGH*VGRVDL
Trigger: GAGGTCAACCCGGCCTACTCAGTGCCCAGCAGCCAG...TCCACTGAGTACGGGGAGCTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCAGTCCCCGTGCGGGTaGGGCCTCTCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLQSPCG*GLSSRP
Trigger: CGGCCGAGAAGAGAGGCCGCACCCGCACGGGGACTG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATGGGCGCTCTGGGAGATaGAGTCCCCGTGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDGRSGR*SPRAGA
Trigger: CGCACCCGCACGGGGACTGCATCTCCCAGAGCGCCC...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGPDSRF*TVSPAA
Trigger: CGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGG...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNPDSRF*TVSPAA
Trigger: CGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGG...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGAGGCGGCGTCCTCGCTaGCCAGCCAGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGRRRPR*PASPTA
Trigger: TGCTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCT...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGCCCACCGGTCACGGGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGACGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPTGHGTSSRSGCRRWRGRRGPG*APVGGR
Trigger: CCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACG...TCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCCCGTGACCGGTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGTCCGTCACAGTCAGGTaGACGTCCTGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRSVTVR*TSCCWA
Trigger: GGCCCAGCAGCAGGACGTGCACCTGACTGTGACGGA...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RCQGAGGPGGWRTTCPCRTLARV*MQPMQA
Trigger: GGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGT...CCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp AGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGGACAGGGCAGGAGAATaGGGTCCAGGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: RCQGAGGPGGWRTTCPCRDRAGE*GPGLAR
Trigger: ACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTC...CCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCCCGGCCATGGCCCCTaGTGCCTTCACCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGPGHGP*CLHLLS
Trigger: GCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGG...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACATGGGCTGCCCTaGGGATGGGTGCCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPPHGLP*GWVPGA
Trigger: AGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGG...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp AGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGGATGACCACATGGGCTaGCCTGCGGATGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SPLSARCTHPGCRSVRGRDDHMG*PADGCP
Trigger: CGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATC...CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR CCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTCTTCTCGGCCGGCCCTaGAGGCGGCACCGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCLLGRP*RRHRTC
Trigger: ACAGGTGCGGTGCCGCCTCCAGGGCCGGCCGAGAAG...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSSGTTA*RPCGAS
Trigger: ACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACT...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTAGCGGCAGCAGCGAGTaGCACAACAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTSGSSE*HNSVAA
Trigger: GGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCT...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGGRRGS*RLANHL
Trigger: CAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCC...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGGCAGGGCACGCGGCAGATGACGACCACCTaGGGTAGACCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VHTSRMQKRARQVGQGTRQMTTT*GRPRVS
Trigger: GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG...CCGCGTGCCCTGCCCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGGTCAGGGCTGTGCCCTaGGGCCTGGCCAACATCCCC +
Preference number: 4 (lower is better)
Translates to: ACGCLLAGLHQLHAGTCLVRAVP*GLANIP
Trigger: GGGGATGTTGGCCAGGCCCCAGGGCACAGCCCTGAC...CAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGTCAGGGCTGTGCCCTaGGGCCTGGCCAACATCCCC +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAVRAVP*GLANIP
Trigger: GGGGATGTTGGCCAGGCCCCAGGGCACAGCCCTGAC...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp AGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAGGGGGCTGCCCTGCGGATaGGTGCCCGGAGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RRCVCVCRICPHQQERGRGLPCG*VPGASR
Trigger: GCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCC...CCTGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp CCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCCAGATAGGCGAGAGTaGAGGTCACCTCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQPTQRTVHTSRMQKRARPDRRE*RSPRGC
Trigger: ACAGCCCCGAGGTGACCTTCACTCTCGCCTATCTGG...CCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp CATGCCCACATAGTAGCTCTGCACTTCCCCAGCCGGCCACTCTCTCCCTGCCTGCCTCAGGGGCCTGGCTaGGGGCGTGGAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: HAHIVALHFPSRPLSPCLPQGPG*GRGAAF
Trigger: AAAAGCGGCTCCACGCCCTCAGCCAGGCCCCTGAGG...CAGGCAGGGAGAGAGTGGCCGGCTGGGGAAGTGCAGAGCTACTATGTGGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR TCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTTCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGGGCAGCCCCACAAATaGGGGCGCTCTGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEGQPHK*GRSDLS
Trigger: GGACAGGTCAGAGCGCCCTCATTTGTGGGGCTGCCC...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGGCACCAAGGACAGGATaGGAAACCCGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALACGCLLAGLHQLHAGTAPRTG*ETRRGS
Trigger: GCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGC...CGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCGCGTGCATCCCCTTCTaGGCCTGGGAGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGACIPF*AWETLG
Trigger: CCCTAGGGTCTCCCAGGCTCAGAAGGGGATGCACGC...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAACTGGCTGCTGGGCACTaGGTAGGCCGGGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQELAAGH*VGRVDL
Trigger: GAGGTCAACCCGGCCTACTCAGTGCCCAGCAGCCAG...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAATTCATGGGGCGACTaGGAGCCCGGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRNSWGD*EPGVSA
Trigger: AGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATT...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GAACTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ELSVDRGGNSLPARLWEGPDSRF*TVSPAA
Trigger: CGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGG...GCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAAGGCGGCGTCCTCGCTaGCCAGCCAGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPRRRPR*PASPTA
Trigger: TGCTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCT...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGATCCGTCACAGTCAGGTaGACGTCCTGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGSVTVR*TSCCWA
Trigger: GGCCCAGCAGCAGGACGTGCACCTGACTGTGACGGA...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGGCGAGAGCTCATGCTaGCGAGACTCCGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADAGESSC*RDSVTV
Trigger: GACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCC...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGCAGGTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RCQGAGGPGGWRTTCPCRWHVSA*SLCRPP
Trigger: TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCA...CCTGCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp CAGCCAGGTGTCAGGGCGCAGGGGGTCCTGGCGGCTGGCGAACCACTTGCCCATGAGGCAAAGAGGAGGTaGCCAGGACTTGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: QPGVRAQGVLAAGEPLAHEAKRR*PGLVPW
Trigger: CCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTC...ATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCCTGACACCTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGCCCGGCCATGGCCCCTaGTGCCTTCACCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGPGHGP*CLHLLS
Trigger: GCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCCGGG...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp ACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TAGTRLWLPPGRSSPASRCPADG*PELLAE
Trigger: CTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCA...GCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCACATGGGCTGCCCTaGGGATGGGTGCCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNPHGLP*GWVPGA
Trigger: AGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGG...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR CCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGGAACTCGAAATTCATaGGGCGACTGCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADAGTRNS*GDCEPG
Trigger: CCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCC...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: ELGKTPTRGLTTGGVHPLVSPAA*NSLGVN
Trigger: GTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCAC...AAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCATCAGGATGCAGGCGATaGAGGGGAGGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSSGCRR*RGGSRP
Trigger: TGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGA...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTC +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCQGARQ*VAGPPV
Trigger: GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTG...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTCTGCCAGCCAGACTGTaGGAGGGCGTAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCLPARL*EGVEGQ
Trigger: CTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAG...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCTGCCAGCCAGACTGTaGGAGGGCGTAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTLPARL*EGVEGQ
Trigger: CTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATGGGGGTCCTGGCGGCTaGCGAACCACTTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNGGPGG*RTTCPC
Trigger: GCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCC...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GACACAGAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGGGGTCCTGGCGGCTaGCGAACCACTTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: DTESPQGPSPLSARCTHPGGPGG*RTTCPC
Trigger: GCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCC...TGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTCTGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: ALACGCLLAGLHQLHAGTRVSRE*LGGRRC
Trigger: ACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCT...CGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCT +
Preference number: 4 (lower is better)
Translates to: GPSPLSARCTHPGCRSVRRSPRL*WMTTWA
Trigger: AGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCT...GCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR TCA 90 bp CTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGTAGCAGGTTCTGCACCGTaGGCCCCGCCGCGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LSVDRGGNSLPARLWEGVAGSAP*APPRGT
Trigger: AGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGC...TACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR TCA 90 bp TGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGCATGCAGCCACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: CLLAGLHQLHAGTCLHAATCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...GGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCGCGGCACCGCACCTGTaGATTGAGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SREWLGGRRCVCVCRICPAAPHL*IEHRWG
Trigger: TCCCCACCTGTGCTCAATGCACAGGTGCGGTGCCGC...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGCGGCACCGCACCTGTaGATTGAGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAAAPHL*IEHRWG
Trigger: TCCCCACCTGTGCTCAATGCACAGGTGCGGTGCCGC...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCGGGCGCTCTGGGAGATaGAGTCCCCGTGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCGRSGR*SPRAGA
Trigger: CGCACCCGCACGGGGACTGCATCTCCCAGAGCGCCC...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCCGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCRRGPG*APVGGR
Trigger: CCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACG...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCGAGGAGGCAACAGCCTaGCAGCCAGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGEEATA*QPDCGR
Trigger: CCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTC...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGTCAGGTGCACGTCCTaGTGCTGGGCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTVRCTS*CWATCT
Trigger: AGTGCACGTGGCCCAGCAGCAGGACGTGCACCTGAC...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCTCCGTCACAGTCAGGTaGACGTCCTGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SREWLGGRRCVCVCRICPSVTVR*TSCCWA
Trigger: GGCCCAGCAGCAGGACGTGCACCTGACTGTGACGGA...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTCGGATGGTGAGGAGCTaGACGGGCAAGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADARMVRS*TGKFES
Trigger: AGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCG...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGTLARV*MQPMQA
Trigger: GGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGT...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGTLARV*MQPMQA
Trigger: GGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGT...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPALACG*LLAGLH
Trigger: GTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGTGGGTGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSAHGAHIQDAEACAAGGCTHPG*RSVRGR
Trigger: CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCA...CCCACCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGATGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGCTHPG*RSVRGR
Trigger: CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCA...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTCCACTCAGCGCACGGTaGACACATCCAGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADAPLSAR*THPGCR
Trigger: TCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGG...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADALSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGTGTGTGTGCAGGATCTaGCCCCACCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRCVCRI*PHQQER
Trigger: CCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACA...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGGCCATGGCCCCTGCTaGCTTCACCTGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SGPRSPSPLPQTAKPRGFGHGPC*LHLLSA
Trigger: AGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC...AAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp AGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAGGGGCCATGGCCCCTGCTaGCTTCACCTGCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RRCVCVCRICPHQQERGRGHGPC*LHLLSA
Trigger: AGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC...CCTGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATTGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDCPADG*PELLAE
Trigger: CTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCA...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATGATGACCACATGGGCTaGCCTGCGGATGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDDDHMG*PADGCP
Trigger: CGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATC...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCAGGATGCAGGCGATaGAGGGGAGGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGSGCRR*RGGSRP
Trigger: TGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGA...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RPPGVDPGSPGNGSGADASPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp AGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGGCTGGCACTCGCCTGTaGCTGCCTCCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RHQGQDEKPGGAAPQMRAAGTRL*LPPGRS
Trigger: AGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGC...CGCCCTCATTTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGGGGGTCCTGGCGGCTaGCGAACCACTTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPGGPGG*RTTCPC
Trigger: GCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCC...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTGGGCGCAGGGGGTCCTaGCGGCTGGCGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAGRRGS*RLANHL
Trigger: CAAGTGGTTCGCCAGCCGCCAGGACCCCCTGCGCCC...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGRVSRE*LGGRRC
Trigger: ACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCT...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGACAGATGACGACCACCTaGGGTAGACCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGQMTTT*GRPRVS
Trigger: GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPSPLSARCTHPGCRSVRNAVQV*HVTEGG
Trigger: CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATT...GCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCGGGCTGCCCTGCGGATaGGTGCCCGGAGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCGLPCG*VPGASR
Trigger: GCGAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCC...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGATGGTGGATGACCACATaGGCTGCCCTGCGGATGGGT +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGWWMTT*AALRMG
Trigger: ACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCA...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTTCGCCCAGGCTCTGGTaGATGACCACATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELGKTPTRGLTTGGVHPLSPRLW*MTTWAA
Trigger: GGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGA...AAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR CCA 90 bp CACAGAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGTCGCCCAGGCTCTGGTaGATGACCACATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRVTSRPQPTQRTVHTSRSPRLW*MTTWAA
Trigger: GGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGA...CCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR CCA 90 bp GACACAGAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCACCAGCTCCTGGCTGCTaGGCACTGAGTAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: DTESPQGPSPLSARCTHPPAPGC*ALSRPG
Trigger: ACCCGGCCTACTCAGTGCCCAGCAGCCAGGAGCTGG...TGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR TCA 90 bp CCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGACCGCACCTGTGCATTaGGCACAGGTGGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: PQPTQRTVHTSRMQKRARTAPVH*AQVGKL
Trigger: AAGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGT...CCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR TCA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTGGAACTCGTTGGGCGTaGACACGAAGCACACGGCGA +
Preference number: 4 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGAGTRWA*TRSTRR
Trigger: TCGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCC...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGGGAACTCGTTGGGCGTaGACACGAAGCACACGGCGA +
Preference number: 4 (lower is better)
Translates to: QAPGVHHLCLKQPSPGALGTRWA*TRSTRR
Trigger: TCGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCC...CAAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATGCACCAAGGACAGGATaGGAAACCCGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNAPRTG*ETRRGS
Trigger: GCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGC...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTCCCTACCCAGGAGTCTaGGACCTCGGCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPPYPGV*DLGLPW
Trigger: CCAGGGAAGGCCGAGGTCTCAGACTCCTGGGTAGGG...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CCTGGGCTGGACCCCTGGTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGCCCTACCCAGGAGTCTaGGACCTCGGCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGLDPWWACVLDVAMALWPYPGV*DLGLPW
Trigger: CCAGGGAAGGCCGAGGTCTCAGACTCCTGGGTAGGG...CCAAAGTGCCATAGCGACATCCAGAACACAAGCCCACCAGGGGTCCAGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTGCGTGCATCCCCTTCTaGGCCTGGGAGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPACIPF*AWETLG
Trigger: CCCTAGGGTCTCCCAGGCTCAGAAGGGGATGCACGC...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTAATTCATGGGGCGACTaGGAGCCCGGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCNSWGD*EPGVSA
Trigger: AGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATT...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGGCGGCACCGCACCTGTaGATTGAGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NHQELGKTPTRGLTTGGVAAPHL*IEHRWG
Trigger: TCCCCACCTGTGCTCAATGCACAGGTGCGGTGCCGC...CACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTCAGTCCCCGTGCGGGTaGGGCCTCTCTTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAQSPCG*GLSSRP
Trigger: CGGCCGAGAAGAGAGGCCGCACCCGCACGGGGACTG...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCCTACCCAGGAGAGGCGGCGTCCTCGCTaGCCAGCCAGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: DVAMALWSSTQTPTPTQERRRPR*PASPTA
Trigger: TGCTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCT...CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCGAGGAGGCAACAGCCTaGCAGCCAGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAEEATA*QPDCGR
Trigger: CCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTC...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGAGGGTCACGGCCAGCAGGAGGAGGCAACAGCCTaGCAGCCAGACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPVVDQDAGDGGEGHGQQEEATA*QPDCGR
Trigger: CCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTC...CTGCTGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCACACGGGCACCTGGTaGACCGGTGGCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGHTGTW*TGGKLV
Trigger: GACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RHQGQDEKPGGAAPQMRAALACG*LLAGLH
Trigger: GTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC...CGCCCTCATTTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCAGGCCACTCAGCGCACGGTaGACACATCCAGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: SPLSARCTHPGCRSVRGRPLSAR*THPGCR
Trigger: TCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGG...CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GGGGCGGCAGTAACACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCCACTCAGCGCACGGTaGACACATCCAGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GAAVTLLALACGCLLAGLPLSAR*THPGCR
Trigger: TCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGG...AAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGTGTTACTGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCGACAGGGCAGGAGAATaGGGTCCAGGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: SREWLGGRRCVCVCRICPDRAGE*GPGLAR
Trigger: ACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTC...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCCACACCACAGCAGTaGCCTCTTCTCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGPTPQQ*PLLHPT
Trigger: GGTGGGATGGAGAAGAGGGCACTGCTGTGGTGTGGG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCTCTGCATGCAGCCTATaGAGGCCTCCAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESPQGPSPLSARCTHPGCSACSL*RPPAPG
Trigger: GCCAGGAGCTGGAGGCCTGCATAGGCTGCATGCAGA...GCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCATCTGCATGCAGCCTATaGAGGCCTCCAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCASACSL*RPPAPG
Trigger: GCCAGGAGCTGGAGGCCTGCATAGGCTGCATGCAGA...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TGGGAGGGCGTAGAGGGCCAGGGTGCGCGCCAGTGGGTGGCAGGCCCACCGGTCGCTGATCAAATGTGGTaGATCCCAGAGCTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: WEGVEGQGARQWVAGPPVADQMW*IPELKS
Trigger: ACTTTTCAGCTCTGGGATGCACCACATTTGATCAGC...GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACGCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGGGAACTCGAAATTCATaGGGCGACTGCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGGTRNS*GDCEPG
Trigger: CCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCC...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGCAGGGTGCGCGCCAGTaGGTGGCAGGCCCACCGGTC +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLQGARQ*VAGPPV
Trigger: GACCGGTGGGCCTGCCACCCACTGGCGCGCACCCTG...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGTACTGCCAGCCAGACTGTaGGAGGGCGTAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSVDRGGNSLPARLWEGVLPARL*EGVEGQ
Trigger: CTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAG...TACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp CAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGGGGCAAGTTCGAGTCTaGCGAGAGCTCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QAPGVHHLCLKQPSPGALGQVRV*RELMLP
Trigger: CGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCC...CAAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GCTCTGGTGGATGACCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ALVDDHMGCPADGCPELLSPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...GAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR CCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCCTGGGCTGGACCCCTaGTGGGCTTGTGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTPGLDP*WACVLD
Trigger: ATCCAGAACACAAGCCCACCAGGGGTCCAGCCCAGG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCCCTGGCTCCCGGCCATaGCCCCTGCTGCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCPGSRP*PLLPSP
Trigger: AGGTGAAGGCAGCAGGGGCCATGGCCGGGAGCCAGG...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAATGGTGGATGACCACATaGGCTGCCCTGCGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEWWMTT*AALRMG
Trigger: ACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCA...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCT +
Preference number: 4 (lower is better)
Translates to: SREWLGGRRCVCVCRICPRSPRL*WMTTWA
Trigger: AGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCT...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGAAGGTCGCCCAGGCTCTaGTGGATGACCACATGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGRSPRL*WMTTWA
Trigger: AGCCCATGTGGTCATCCACCAGAGCCTGGGCGACCT...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCGCCGGAACTCAGTGTTaGCAGAGGAGGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPAGTQC*QRRQQP
Trigger: AGGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGC...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ACGCLLAGLHQLHAGTCLGLARN*GWVCSR
Trigger: TCTGGAGCATACCCACCCTCAGTTACGTGCCAGACC...CAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR TCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCAAATGAGGGCGCTCTaGCCTGTCCTCCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGQMRAL*PVLPLP
Trigger: TGGCAATGGGAGGACAGGTCAGAGCGCCCTCATTTG...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTGGGCAGCCCCACAAATaGGGGCGCTCTGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAGQPHK*GRSDLS
Trigger: GGACAGGTCAGAGCGCCCTCATTTGTGGGGCTGCCC...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCTGAGTAGGCCGGGTTaGCCTCTACCAGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNLSRPG*PLPGRQ
Trigger: TTGCCTCCCTGGTAGAGGTCAACCCGGCCTACTCAG...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR TCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGCTGAGTAGGCCGGGTTaGCCTCTACCAGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGLSRPG*PLPGRQ
Trigger: TTGCCTCCCTGGTAGAGGTCAACCCGGCCTACTCAG...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCAAGCCGCAAGGCACATaGCCACATAGTAGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPKPQGT*PHSSRA
Trigger: CGCTCGGCTACTATGTGGGCATGTGCCTTGCGGCTT...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGTAGTAGATCAGGATaGAGGCGATGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QMTTTWGRPRVSREWLGGSSRSG*RRWRGG
Trigger: CCCTCCCCTCCATCGCCTGCATCCTGATCTACTACT...GCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTCGTAGAGGGCCAGGGTaGGCGCCAGTGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSAFCRPRAEASCSTSCRRGPG*APVGGR
Trigger: CCTGCCACCCACTGGCGCGCACCCTGGCCCTCTACG...ACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGGCGAGAGCTCATaGTGCCGAGACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGSGESS*CRDSVT
Trigger: TGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGA...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCCGGATGGTGAGGAGCTaGACGGGCAAGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: ESPQGPSPLSARCTHPGCRMVRS*TGKFES
Trigger: AGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCG...GCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCGGATGGTGAGGAGCTaGACGGGCAAGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTRMVRS*TGKFES
Trigger: AGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCATGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAWHVSA*SLCRPP
Trigger: TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCA...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp AACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGTGCACACATCCAGGATaGAGAAGCGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NHQELGKTPTRGLTTGGVCTHPG*RSVRGR
Trigger: CCTGCCGCGCACGCTTCTGCATCCTGGATGTGTGCA...CACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCCACTCAGCGCACGGTaGACACATCCAGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: SREWLGGRRCVCVCRICPPLSAR*THPGCR
Trigger: TCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGG...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGAAGTCCTCAGCCTTCTaGAGACCCAGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLKSSAF*RPRAEA
Trigger: CGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ESPQGPSPLSARCTHPGCDLYPG*QAGWGV
Trigger: AACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTC...GCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ACGCLLAGLHQLHAGTCLDLYPG*QAGWGV
Trigger: AACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTC...CAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR GCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGGAGGCAAAGAGGAGGTaGCCAGGACTTGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGEAKRR*PGLVPW
Trigger: CCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTC...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGAGGCAAAGAGGAGGTaGCCAGGACTTGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEEAKRR*PGLVPW
Trigger: CCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTC...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGACAGGGCAGGAGAATaGGGTCCAGGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: SGPRSPSPLPQTAKPRGFDRAGE*GPGLAR
Trigger: ACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTC...AAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGGACAGGGCAGGAGAATaGGGTCCAGGTCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLDRAGE*GPGLAR
Trigger: ACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTC...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTCCCACACCACAGCAGTaGCCTCTTCTCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCPTPQQ*PLLHPT
Trigger: GGTGGGATGGAGAAGAGGGCACTGCTGTGGTGTGGG...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAAGGAAGCCCCAGGACTaGTCCCACACCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ADAVSVCAGSAPTSRKGARKPQD*SHTTAV
Trigger: CACTGCTGTGGTGTGGGAGCAGTCCTGGGGCTTCCT...TGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTTGCCCTGCGGATGGGTaGCCGGAGCTTCTCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYACPADG*PELLAE
Trigger: CTCTGCGAGAAGCTCCGGGCACCCATCCGCAGGGCA...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp AACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGTCTGCATGCAGCCTATaGAGGCCTCCAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NHQELGKTPTRGLTTGGVSACSL*RPPAPG
Trigger: GCCAGGAGCTGGAGGCCTGCATAGGCTGCATGCAGA...CACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR CCA 90 bp GAACTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGCCTGGCTGAGGGCGTaGAGCCGCTTTTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: ELSVDRGGNSLPARLWEGAWLRA*SRFSEA
Trigger: GGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGC...GCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTTCAGGATGCAGGCGATaGAGGGGAGGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPSGCRR*RGGSRP
Trigger: TGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGA...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCGTGCGCGCCAGTGGGTaGCAGGCCCACCGGTCACGG +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPVRASG*QAHRSR
Trigger: CCGTGACCGGTGGGCCTGCCACCCACTGGCGCGCAC...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCACCTGGTGCACCGGTaGCAAACTTGTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGHLVHR*QTCQSA
Trigger: GGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAAATCACACGGGCACCTaGTGCACCGGTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSNHTGT*CTGGKL
Trigger: AAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATT...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp AGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGGGGCAAGTTCGAGTCTaGCGAGAGCTCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RHQGQDEKPGGAAPQMRAGQVRV*RELMLP
Trigger: CGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCC...CGCCCTCATTTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: HSPVAASWQVFTSFTLARSPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...ACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPRVSRE*LGGRRC
Trigger: ACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCT...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GAACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTTGACCACAGGGGGCGTGGGCTGGACCCCTGGTaGGCTTGTGTTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: EPSGTGQDAHQRLDHRGRGLDPW*ACVLDV
Trigger: GACATCCAGAACACAAGCCCACCAGGGGTCCAGCCC...ACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCGAGACCCTAGGGGAGTaGGTAGCCTGGGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: EVRQMAQMTTTWGRPRVSETLGE*VAWAGP
Trigger: GGGTCCAGCCCAGGCTACCCACTCCCCTAGGGTCTC...GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAGCTCCCCGTACTCAGTaGAGTTCAGCCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ADAVSVCAGSAPTSRKGAAPRTQ*SSACRE
Trigger: CTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGC...TGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460722.1
3UTR CAA 72 bp AACCATCAGGAACTGGGCAAGACGCCCACCAGAGGCTaGACCACAGGGGGCGTGCATCCCCTTCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NHQELGKTPTRG*TTGGVHPLLSL
Trigger: CAGGCTCAGAAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGTCTTGCCCAGTTCCTGATGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTGTGGAGCCGCTTTTCTaGAGCCGCAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPVEPLF*SRKAHA
Trigger: GGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCAC...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCGCCGGAACTCAGTGTTaGCAGAGGAGGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAAGTQC*QRRQQP
Trigger: AGGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGC...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTACTTGCCCATGCAGGTaGGGCACCACATGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCATCPCR*GTTWGG
Trigger: GCCGCCCCATGTGGTGCCTCACCTGCATGGGCAAGT...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCAAATGAGGGCGCTCTaGCCTGTCCTCCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLQMRAL*PVLPLP
Trigger: TGGCAATGGGAGGACAGGTCAGAGCGCCCTCATTTG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGAGTCAGACACCCTGGCGTaGCCTCCACTCCGGAAACGG +
Preference number: 4 (lower is better)
Translates to: QENAVQVWHVTEGGYAPESDTLA*PPLRKR
Trigger: CCGTTTCCGGAGTGGAGGGCACGCCAGGGTGTCTGA...CTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp CCTGGGCTGGACCCCTGGTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGAATTCATGGGGCGACTaGGAGCCCGGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGLDPWWACVLDVAMALWNSWGD*EPGVSA
Trigger: AGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATT...CCAAAGTGCCATAGCGACATCCAGAACACAAGCCCACCAGGGGTCCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTGAGATGCAGTCCCCGTaGGGGTGCGGCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAEMQSP*GCGLSS
Trigger: AGAAGAGAGGCCGCACCCGCACGGGGACTGCATCTC...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGAGTAGTAGATCAGGATaGAGGCGATGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGSSRSG*RRWRGG
Trigger: CCCTCCCCTCCATCGCCTGCATCCTGATCTACTACT...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGTCTGGCGAGAGCTCATaGTGCCGAGACTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLSGESS*CRDSVT
Trigger: TGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGA...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTCAGATGTCAAAGGCCTaGACAGCAGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCQMSKA*TAGLVL
Trigger: CAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTG...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGACAGATGTCAAAGGCCTaGACAGCAGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGQMSKA*TAGLVL
Trigger: CAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTG...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRTGQENAVQVWHVTEGGWHVSA*SLCRPP
Trigger: TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCA...CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLLSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCDLYPG*QAGWGV
Trigger: AACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTC...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCCATGGCCCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATTGTGTGTGCAGGATCTaGCCCCACCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GHGPCCLHLLSALGSLPNCVCRI*PHQQER
Trigger: CCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACA...ATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGGGCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp AGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAGGTGTGTGTGCAGGATCTaGCCCCACCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRCVCVCRICPHQQERGRCVCRI*PHQQER
Trigger: CCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACA...CCTGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAGCCTGCAGGGAGGAGAAGGAAGCCCCAGGACTaGTCCCACACCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ELLAELPVLSGVQPAGRRRKPQD*SHTTAV
Trigger: CACTGCTGTGGTGTGGGAGCAGTCCTGGGGCTTCCT...TCTCCTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGCTCTGCGAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp CTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAGGAGTCCATCACCTCTaGCTCAAACAGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGGRRCVCVCRICPHQQEGVHHL*LKQPSP
Trigger: TGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCC...TTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATACAACCCCAACCCACTaGCCCTCTTTGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDTTPTH*PSLAAL
Trigger: AAGGGCTGCCAAAGAGGGGCAGTGGGTTGGGGTTGT...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAAGCGGCAGCAGCGAGTaGCACAACAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSSGSSE*HNSVAA
Trigger: GGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCT...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCGCCTGGCTGAGGGCGTaGAGCCGCTTTTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: EVRQMAQMTTTWGRPRVSAWLRA*SRFSEA
Trigger: GGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGC...GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTAATCACACGGGCACCTaGTGCACCGGTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTNHTGT*CTGGKL
Trigger: AAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATT...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTCGTGCACTCGGTAGGTaGTTACCTTCATCACCCACG +
Preference number: 4 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGARALGR*LPSSPT
Trigger: CGTGGGTGATGAAGGTAACCACCTACCGAGTGCACG...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGGGCAAGTTCGAGTCTaGCGAGAGCTCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPGQVRV*RELMLP
Trigger: CGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCC...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGGGTCCTGGCGGCTaGCGAACCACTTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLGGPGG*RTTCPC
Trigger: GCATGGGCAAGTGGTTCGCCAGCCGCCAGGACCCCC...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCCCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGAGGCAAATGTCTCCAGGAACAGGTCGCCCAGGCTCTGGTGGATGACCACATGAGGGTCTCCAGGGAATaGCTCGGGGGCAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GGKCLQEQVAQALVDDHMRVSRE*LGGRRC
Trigger: ACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCT...CATGTGGTCATCCACCAGAGCCTGGGCGACCTGTTCCTGGAGACATTTGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCACAGATGACGACCACCTaGGGTAGACCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPQMTTT*GRPRVS
Trigger: GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGLQGMARGQTLCLCVQDNAVQV*HVTEGG
Trigger: CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATT...ATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCAGAAGCGTGCGCGGCTTCCCTGGACTTGTTaGGCAGAAAAAGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: PQPTQRTVHTSRMQKRARLPWTC*AEKGTK
Trigger: CTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAG...CCGCGCACGCTTCTGCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp GGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGGGTGGGCTTGTGTTCTaGATGTCGCTATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: GSGADAVSVCAGSAPTSRGGLVF*MSLWHF
Trigger: AAAGTGCCATAGCGACATCCAGAACACAAGCCCACC...CCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp ACTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCCCCACTGCCCCTCTTTaGCAGCCCTTGAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: TAGTRLWLPPGRSSPASRPTAPL*QPLKLS
Trigger: ACTGAGTTTCAAGGGCTGCCAAAGAGGGGCAGTGGG...GCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CCA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAGCTCCCCGTACTCAGTaGAGTTCAGCCAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGAPRTQ*SSARCQ
Trigger: TTGACATCTGGCTGAACTCCACTGAGTACGGGGAGC...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAGCTCCCCGTACTCAGTaGAGTTCAGCCAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSAPRTQ*SSARCQ
Trigger: TTGACATCTGGCTGAACTCCACTGAGTACGGGGAGC...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCATGGTGGATGACCACATaGGCTGCCCTGCGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPWWMTT*AALRMG
Trigger: ACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCA...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTCCAGCTCCTGGCTGCTaGGCACTGAGTAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAPAPGC*ALSRPG
Trigger: ACCCGGCCTACTCAGTGCCCAGCAGCCAGGAGCTGG...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp GTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTACCGCACCTGTGCATTaGGCACAGGTGGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VDPGSPGNGSGADAVSVCTAPVH*AQVGKL
Trigger: AAGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGT...ACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCGCAGGTTCTGCACCGTaGGCCCCGCCGCGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPAGSAP*APPRGT
Trigger: AGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGC...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPGLARN*GWVCSR
Trigger: TCTGGAGCATACCCACCCTCAGTTACGTGCCAGACC...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR TCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCACAAATGAGGGCGCTCTaGCCTGTCCTCCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPQMRAL*PVLPLP
Trigger: TGGCAATGGGAGGACAGGTCAGAGCGCCCTCATTTG...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTGAGATGCAGTCCCCGTaGGGGTGCGGCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAEMQSP*GCGLSS
Trigger: AGAAGAGAGGCCGCACCCGCACGGGGACTGCATCTC...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTGGCGAGAGCTCATGCTaGCGAGACTCCGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAGESSC*RDSVTV
Trigger: GACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCC...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCAGATGTCAAAGGCCTaGACAGCAGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLQMSKA*TAGLVL
Trigger: CAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTG...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PKVLSLLQTQGRGELLYIALACG*LLAGLH
Trigger: GTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCCACACCACAGCAGTaGCCTCTTCTCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAPTPQQ*PLLHPT
Trigger: GGTGGGATGGAGAAGAGGGCACTGCTGTGGTGTGGG...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGATGACCACATGGGCTaGCCTGCGGATGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLDDHMG*PADGCP
Trigger: CGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATC...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSVSPAA*NSLGVN
Trigger: GTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCAC...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLVSPAA*NSLGVN
Trigger: GTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCAC...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSSGTTA*RPCGAS
Trigger: ACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACT...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCGCCTGGCTGAGGGCGTaGAGCCGCTTTTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKVLSLLQTQGRGELLYIAWLRA*SRFSEA
Trigger: GGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGC...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CTGAGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGCCAGCCAGACTGTaGGAGGGCGTAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRVGMLQRSKANGPDDDHLPARL*EGVEGQ
Trigger: CTGGCCCTCTACGCCCTCCCACAGTCTGGCTGGCAG...GTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GAGTCACCTCAAGGCCCCAGCCCACTCAGCGCACGGTGCACACATCCAGGATGCGGCTGCCAAGCAGGGTaGGGTGTTTTCATGAGGATT +
Preference number: 4 (lower is better)
Translates to: ESPQGPSPLSARCTHPGCGCQAG*GVFMRI
Trigger: AATCCTCATGAAAACACCCCACCCTGCTTGGCAGCC...GCATCCTGGATGTGTGCACCGTGCGCTGAGTGGGCTGGGGCCTTGAGGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CCA 90 bp GACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGCTGCCAAGCAGGGTaGGGTGTTTTCATGAGGATT +
Preference number: 4 (lower is better)
Translates to: DPGSPGNGSGADAVSVCAGCQAG*GVFMRI
Trigger: AATCCTCATGAAAACACCCCACCCTGCTTGGCAGCC...TGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCGGGCTGGACCCCTGGTaGGCTTGTGTTCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCGLDPW*ACVLDV
Trigger: GACATCCAGAACACAAGCCCACCAGGGGTCCAGCCC...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGAGACCCTAGGGGAGTaGGTAGCCTGGGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLETLGE*VAWAGP
Trigger: GGGTCCAGCCCAGGCTACCCACTCCCCTAGGGTCTC...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAAGGGAGGAGAGCTGCTaGGCCCCTCAGATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPREESC*APQMSK
Trigger: CTTTGACATCTGAGGGGCCCAGCAGCTCTCCTCCCT...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR TCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTGGAACTCGTTGGGCGTaGACACGAAGCACACGGCGA +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAGTRWA*TRSTRR
Trigger: TCGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCC...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTGTGGAGCCGCTTTTCTaGAGCCGCAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAVEPLF*SRKAHA
Trigger: GGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCAC...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCGCCGGAACTCAGTGTTaGCAGAGGAGGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCAGTQC*QRRQQP
Trigger: AGGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGC...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCGGGCAGCCCCACAAATaGGGGCGCTCTGACCTGTCC +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPGQPHK*GRSDLS
Trigger: GGACAGGTCAGAGCGCCCTCATTTGTGGGGCTGCCC...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp GGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCTGGCTGCTGGGCACTaGGTAGGCCGGGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: GLCSGCRYGTLVLNSNPHLAAGH*VGRVDL
Trigger: GAGGTCAACCCGGCCTACTCAGTGCCCAGCAGCCAG...GTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR GCA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTCCCAGTAGCGTCAGTTaGGGAACTCGAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: GASSRTGQENAVQVWHVTPSSVS*GTRNSW
Trigger: CCATGAATTTCGAGTTCCGCAACTGACGCTACTGGG...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGAGAAGCCGCAAGGCACATaGCCACATAGTAGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: QENAVQVWHVTEGGYAPEKPQGT*PHSSRA
Trigger: CGCTCGGCTACTATGTGGGCATGTGCCTTGCGGCTT...CTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTCAGATGTCAAAGGCCTaGACAGCAGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPQMSKA*TAGLVL
Trigger: CAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTG...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCCAAGTGTTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PCCLHLLSALGSLPNPKCWHVSA*SLCRPP
Trigger: TGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCA...ACACTTGGGATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAGCACTCGCCTGTGGCTaGCTCCTGGCAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSALACG*LLAGLH
Trigger: GTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EVRQMAQMTTTWGRPRVSLSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GAGGGCGCTCTGACCTGTCCTCCCATTGCCACCCCACCCAGGAACAGCCCCTCAAGGGCAGAGGCGAGTTaGTCTACATCATGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: EGALTCPPIATPPRNSPSRAEAS*STSCAL
Trigger: TAAAGCACATGATGTAGAGCAACTCGCCTCTGCCCT...TGAGGGGCTGTTCCTGGGTGGGGTGGCAATGGGAGGACAGGTCAGAGCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GCTCTGGTGGATGACCACATGGGCTGCCCTGCGGATGGGTGCCCGGAGCTTCTCAGGGCAGAGGCGAGTTaGTCTACATCATGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: ALVDDHMGCPADGCPELLRAEAS*STSCAL
Trigger: TAAAGCACATGATGTAGAGCAACTCGCCTCTGCCCT...GAGAAGCTCCGGGCACCCATCCGCAGGGCAGCCCATGTGGTCATCCACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS-3UTR GCA 90 bp GAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCGAGGCAAAGAGGAGGTaGCCAGGACTTGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: EVRQMAQMTTTWGRPRVSEAKRR*PGLVPW
Trigger: CCAGGGTACAAGTCCTGGGCACCTCCTCTTTGCCTC...GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTAGGAAGCCCCAGGACTaGTCCCACACCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCARKPQD*SHTTAV
Trigger: CACTGCTGTGGTGTGGGAGCAGTCCTGGGGCTTCCT...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp AGGCCCACCGGTCACGGGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGAAAGCCGCAAGGCACATaGCCACATAGTAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RPTGHGTSSRSGCRRWRGKPQGT*PHSSSA
Trigger: TGCAGAGCTACTATGTGGGCATGTGCCTTGCGGCTT...TCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCCCGTGACCGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp CTGAGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACGCCTGGCTGAGGGCGTaGAGCCGCTTTTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRVGMLQRSKANGPDDDHAWLRA*SRFSEA
Trigger: GGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGC...GTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCACCTGGTGCACCGGTaGCAAACTTGTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYAHLVHR*QTCQSA
Trigger: GGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTG...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTCACCAGCTTCACGCTaGCACGTGTCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCSPASR*HVSACS
Trigger: GCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGA...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCGCTGGCACTCGCCTGTaGCTGCCTCCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPAGTRL*LPPGRS
Trigger: AGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGC...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCACCAGGACTTGTACCCTaGCTGCCAAGCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSPGLVP*LPSRVG
Trigger: CCCCACCCTGCTTGGCAGCCAGGGTACAAGTCCTGG...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCCAGATGACGACCACCTaGGGTAGACCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKVLSLLQTQGRGELLYIQMTTT*GRPRVS
Trigger: GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTG...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYANAVQV*HVTEGG
Trigger: CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATT...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGACTTCCCTGGACTTGTTaGGCAGAAAAAGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGLPWTC*AEKGTK
Trigger: CTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAG...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCGTCGCTATGGCACTTTaGTCCTCAACTCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAVAMAL*SSTQTP
Trigger: GGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGAC...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGGGTGGGCTTGTGTTCTaGATGTCGCTATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: QAPGVHHLCLKQPSPGALGGLVF*MSLWHF
Trigger: AAAGTGCCATAGCGACATCCAGAACACAAGCCCACC...CAAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATCGCCCAGGCTCTGGTaGATGACCACATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSSPRLW*MTTWAA
Trigger: GGCAGCCCATGTGGTCATCCACCAGAGCCTGGGCGA...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp GGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCAGCTCCTGGCTGCTaGGCACTGAGTAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLCSGCRYGTLVLNSNPHPAPGC*ALSRPG
Trigger: ACCCGGCCTACTCAGTGCCCAGCAGCCAGGAGCTGG...GTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382936.8
CDS-3UTR TCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCACCAGATAGGCGAGAGTaGAGGTCACCTCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSPDRRE*RSPRGC
Trigger: ACAGCCCCGAGGTGACCTTCACTCTCGCCTATCTGG...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCCTACCCAGGAGGGTCTGGCACGTAACTaGGGGTGGGTATGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DVAMALWSSTQTPTPTQEGLARN*GWVCSR
Trigger: TCTGGAGCATACCCACCCTCAGTTACGTGCCAGACC...CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGCTGAGTAGGCCGGGTTaGCCTCTACCAGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLLSRPG*PLPGRQ
Trigger: TTGCCTCCCTGGTAGAGGTCAACCCGGCCTACTCAG...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCAGTAGTAGATCAGGATaGAGGCGATGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCSSRSG*RRWRGG
Trigger: CCCTCCCCTCCATCGCCTGCATCCTGATCTACTACT...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp AAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTCACACGGGCACCTGGTaGACCGGTGGCAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: KSSAFCRPRAEASCSTSCHTGTW*TGGKLV
Trigger: GACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTG...ACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp GGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACGTCAGGTGCACGTCCTaGTGCTGGGCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: GLCSGCRYGTLVLNSNPHVRCTS*CWATCT
Trigger: AGTGCACGTGGCCCAGCAGCAGGACGTGCACCTGAC...GTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp GATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCCTACCCAGGAGCGGATGGTGAGGAGCTaGACGGGCAAGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: DVAMALWSSTQTPTPTQERMVRS*TGKFES
Trigger: AGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCG...CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp AAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KSSAFCRPRAEASCSTSCTLARV*MQPMQA
Trigger: GGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGT...ACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTTTAAGTAGAGCCCTTTaGCAGCCAGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSAFCRPRAEASCSTSCALSRAL*QPGGPA
Trigger: GGCTGGGCCTCCTGGCTGGCAAAGGGCTCTACTTAA...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR GCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAAAGTCCTCAGCCTTCTaGAGACCCAGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSKSSAF*RPRAEA
Trigger: CGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp ACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCGTGCACTCGGTAGGTaGTTACCTTCATCACCCACG +
Preference number: 4 (lower is better)
Translates to: TGQENAVQVWHVTEGGYARALGR*LPSSPT
Trigger: CGTGGGTGATGAAGGTAACCACCTACCGAGTGCACG...AGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCCTACCCAGGAGAATGCGGTCCAGGTCTaGCACGTAACTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DVAMALWSSTQTPTPTQENAVQV*HVTEGG
Trigger: CCCACCCTCAGTTACGTGCCAGACCTGGACCGCATT...CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCAGGCCCCCGGAGTCCATCACCTGACCTCGGCCTTCCCTaGACTTGTTGGGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RSRKPPKSQVSGPRSPSPDLGLP*TCWAEK
Trigger: TTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTC...AGGTGATGGACTCCGGGGGCCTGACACTTGGGATTTGGGAGGCTTCCTAGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGACCTCGGCCTTCCCTaGACTTGTTGGGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPDLGLP*TCWAEK
Trigger: TTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTC...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCTTCTGGATGTCGCTATaGCACTTTGGTCCTCAACTC +
Preference number: 4 (lower is better)
Translates to: GRRCVCVCRICPHQQERGFWMSL*HFGPQL
Trigger: GAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAA...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGCCTGGGCTGGACCCCTaGTGGGCTTGTGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLPGLDP*WACVLD
Trigger: ATCCAGAACACAAGCCCACCAGGGGTCCAGCCCAGG...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp GTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCCCCACTGCCCCTCTTTaGCAGCCCTTGAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: VLSLLQTQGRGELLYIMCPTAPL*QPLKLS
Trigger: ACTGAGTTTCAAGGGCTGCCAAAGAGGGGCAGTGGG...GCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCACCGCACCTGTGCATTaGGCACAGGTGGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: PKVLSLLQTQGRGELLYITAPVH*AQVGKL
Trigger: AAGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGT...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR TCA 90 bp GGACCAGTAGTAGATCAGGATGCAGGCGATGGAGGGGAGGGTCACGGCCAGCAGGGTGCATCCCAGAGCTaGAAAGTTATGTGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: GPVVDQDAGDGGEGHGQQGASQS*KVMCEK
Trigger: TTTCTCGCACATAACTTTTCAGCTCTGGGATGCACC...CTGCTGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGATCTACTACTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAAAGCCGCAAGGCACATaGCCACATAGTAGCCGAGCG +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSKPQGT*PHSSRA
Trigger: CGCTCGGCTACTATGTGGGCATGTGCCTTGCGGCTT...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR GCA 90 bp TCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTAGGGCAGAGGCGAGTTaGTCTACATCATGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SGPRSPSPLPQTAKPRGFRAEAS*STSCAL
Trigger: TAAAGCACATGATGTAGAGCAACTCGCCTCTGCCCT...AAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGACTTGTACCCTGGCTaGCAAGCAGGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLDLYPG*QAGWGV
Trigger: AACACCCCACCCTGCTTGGCAGCCAGGGTACAAGTC...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCACACCTGGTGCACCGGTaGCAAACTTGTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSHLVHR*QTCQSA
Trigger: GGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTG...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp GATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACCCCTACCCAGGAGAATCACACGGGCACCTaGTGCACCGGTGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: DVAMALWSSTQTPTPTQENHTGT*CTGGKL
Trigger: AAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATT...CTCCTGGGTAGGGGTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp CCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCCAAGTGTGGCTGCCAAGCAGGGTaGGGTGTTTTCATGAGGATT +
Preference number: 4 (lower is better)
Translates to: PCCLHLLSALGSLPNPKCGCQAG*GVFMRI
Trigger: AATCCTCATGAAAACACCCCACCCTGCTTGGCAGCC...ACACTTGGGATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCTTCTGGATGTCGCTATaGCACTTTGGTCCTCAACTC +
Preference number: 4 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAFWMSL*HFGPQL
Trigger: GAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAA...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp GGGGCCTGGCTGAGGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATGCCCACAATACGTAAGTGTTaGAAAAACTACAAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: GAWLRAWSRFSEAARHMPTIRKC*KNYKSP
Trigger: CGGGCTTTTGTAGTTTTTTCAACACTTACGTATTGT...GGGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCACGCCCTCAGCCAGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp TCAAATGTGGTGCATCCCAGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTAGGCGGCGTCCTCGCTaGCCAGCCAGCCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: SNVVHPRAEKLCARKEASRRRPR*PASPTA
Trigger: TGCTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCT...ACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp CTGAGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACTCTGCATGCAGCCTATaGAGGCCTCCAGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LRVGMLQRSKANGPDDDHSACSL*RPPAPD
Trigger: ATCTGGAGCTGGAGGCCTGCATAGGCTGCATGCAGA...GTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR GCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCTGTGTGTGCAGGATCTaGCCCCACCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPCVCRI*PHQQER
Trigger: CCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACA...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp CTGAGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACGGAGTCCATCACCTCTaGCTCAAACAGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRVGMLQRSKANGPDDDHGVHHL*LKQPSP
Trigger: TGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCC...GTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR GCA 90 bp GTGGGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCACAACCCCAACCCACTaGCCCTCTTTGGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VGLCSGCRYGTLVLNSNPTTPTH*PSLAAL
Trigger: AAGGGCTGCCAAAGAGGGGCAGTGGGTTGGGGTTGT...GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGCGTGCACTCGGTAGGTaGTTACCTTCATCACCCACG +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLRALGR*LPSSPT
Trigger: CGTGGGTGATGAAGGTAACCACCTACCGAGTGCACG...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CCA 90 bp CAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGAGCTTCCCTGGACTTGTTaGGCAGAAAAAGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: QENAVQVWHVTEGGYAPELPWTC*AEKGTK
Trigger: CTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAG...CTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
3UTR CAA 72 bp CCCAGGAGTCTGAGACCTCGGCCTTCCCTGGACTTGTaGGGCAGAAAAAGGCACCAAGGACAGGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: PRSLRPRPSLDL*GRKRHQGQDEK
Trigger: TTTCTCATCCTGTCCTTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCGAGGTCTCAGACTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CCA 90 bp TCAAATGTGGTGCATCCCAGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTAGCGGCAGCAGCGAGTaGCACAACAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SNVVHPRAEKLCARKEASSGSSE*HNSVAA
Trigger: GGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCT...ACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCAGGCTGCCAAGCAGGGTaGGGTGTTTTCATGAGGATT +
Preference number: 4 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSGCQAG*GVFMRI
Trigger: AATCCTCATGAAAACACCCCACCCTGCTTGGCAGCC...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp CCCTGCCTGTGGCAAAGGCAGGATATATTAGCGGAAAAGGTTTTTAATTTGCTGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGT +
Preference number: 4 (lower is better)
Translates to: PCLWQRQDILAEKVFNLLSGTTA*RPCGAS
Trigger: ACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACT...CAGCAAATTAAAAACCTTTTCCGCTAATATATCCTGCCTTTGCCACAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp AGGGTGGGTATGCTCCAGAGAAGTAAGGCAAATGGCCCAGATGACGACCACCTGAGGGCAGAGGCGAGTTaGTCTACATCATGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVGMLQRSKANGPDDDHLRAEAS*STSCAL
Trigger: TAAAGCACATGATGTAGAGCAACTCGCCTCTGCCCT...CAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTCTCTGGAGCATACCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CCA 90 bp TCAAATGTGGTGCATCCCAGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTTCAGGATGCAGGCGATaGAGGGGAGGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SNVVHPRAEKLCARKEASSGCRR*RGGSRP
Trigger: TGGCCGTGACCCTCCCCTCCATCGCCTGCATCCTGA...ACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTAAATATGGTGTCATTTaGCTACAATCGGTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGAKYGVI*LQSVCL
Trigger: AAGACAAACCGATTGTAGCCAAATGACACCATATTT...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CCCTGCCTGTGGCAAAGGCAGGATATATTAGCGGAAAAGGTTTTTAATTTGCTGGTGGAGCCGCTTTTCTaGAGCCGCAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: PCLWQRQDILAEKVFNLLVEPLF*SRKAHA
Trigger: GGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCAC...CAGCAAATTAAAAACCTTTTCCGCTAATATATCCTGCCTTTGCCACAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGAAATATGGTGTCATTTaGCTACAATCGGTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLKYGVI*LQSVCL
Trigger: AAGACAAACCGATTGTAGCCAAATGACACCATATTT...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR TCA 90 bp CCCTGCCTGTGGCAAAGGCAGGATATATTAGCGGAAAAGGTTTTTAATTTGCTGAAGCCATGGAGATGGTaGGGAGTTGCACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PCLWQRQDILAEKVFNLLKPWRW*GVAPAG
Trigger: ACCTGCTGGTGCAACTCCTCACCATCTCCATGGCTT...CAGCAAATTAAAAACCTTTTCCGCTAATATATCCTGCCTTTGCCACAGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp TCAAATGTGGTGCATCCCAGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTAGTAGTAGATCAGGATaGAGGCGATGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SNVVHPRAEKLCARKEASSSRSG*RRWRGG
Trigger: CCCTCCCCTCCATCGCCTGCATCCTGATCTACTACT...ACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR GCA 90 bp CCCTGCCTGTGGCAAAGGCAGGATATATTAGCGGAAAAGGTTTTTAATTTGCTGGAGATGGTGAGGAGTTaGACCAGCAGGTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PCLWQRQDILAEKVFNLLEMVRS*TSRFQL
Trigger: CAACTGGAACCTGCTGGTGCAACTCCTCACCATCTC...CAGCAAATTAAAAACCTTTTCCGCTAATATATCCTGCCTTTGCCACAGGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CCA 90 bp TCAAATGTGGTGCATCCCAGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTCCAGCAGGTTCCAGTTaGCAAAAAGTAATAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SNVVHPRAEKLCARKEASPAGSS*QKVIVH
Trigger: GTGGACTATTACTTTTTGCCAACTGGAACCTGCTGG...ACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCTGGGATGCACCACATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 90 bp GGCAGCAGCGAGTGGCACAACAGCGTGGCGGCCGTGCGGCGCAAGTaGAAGGGCACGAAGGCGGCGTCCTCGCTGCCCAGCCAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: GSSEWHNSVAAVRRK*KGTKAASSLPSQPD
Trigger: GTCGGGCTGGCTGGGCAGCGAGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000480360.1
ENST00000536901.1
CDS GCA 90 bp AGTAGCCGAGCGGCAGCAGCGAGTGGCACAACAGCGTGGCGGCCGTaGGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSRAAAASGTTAWRP*GASGRARRRRPRCP
Trigger: TGGGCAGCGAGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGGCTACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 90 bp CAGTCACGAGCGGCAGCAGCGAGTGGCACAACAGCGTGGCGGCCGTaGGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QSRAAAASGTTAWRP*GASGRARRRRPRCP
Trigger: TGGGCAGCGAGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS GCA 90 bp ACGAAGGCGGCGTCCTCGCTGCCCAGCCAGCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCGTGGAACTCGTTGGGCGTGAACACG +
Preference number: 5 (lower is better)
Translates to: TKAASSLPSQPDSRF*TVSPAAWNSLGVNT
Trigger: CGTGTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCTTCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000480360.1
ENST00000536901.1
CDS CCA 90 bp GAGTTGGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: ELAQSRAAAASGTTA*RPCGASGRARRRRP
Trigger: AGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 90 bp TGCCCACATAGTAGCCGAGCGGCAGCAGCGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: CPHSSRAAAASGTTA*RPCGASGRARRRRP
Trigger: AGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGGCTACTATGTGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 90 bp GCCCTAAGGCCAGAGCCCACGGACCCAGTGCCAGACAGCCCAGCCTaGGCACGGGACGGACCTAGGAGCAAGGCAGCTGTCCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: ALRPEPTDPVPDSPA*ARDGPRSKAAVQPE
Trigger: CTCAGGCTGGACAGCTGCCTTGCTCCTAGGTCCGTCCCGTGCCCAGGCTGGGCTGTCTGGCACTGGGTCCGTGGGCTCTGGCCTTAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476253.1
CDS CCA 90 bp AGATGCAGTCCCCGTGCGGGTGCGGCCTCTCTTCTCGGCCGGCCCTaGAGGCGGCACCGCACCTGTGCATTGAGCACAGGTGGGGAAACT +
Preference number: 5 (lower is better)
Translates to: RCSPRAGAASLLGRP*RRHRTCALSTGGET
Trigger: AGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGTGCCGCCTCCAGGGCCGGCCGAGAAGAGAGGCCGCACCCGCACGGGGACTGCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 90 bp CCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAGCCTaGAGGGAGGAGAGCTGCTGGGCCCCTCTGCAGGGCAAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: PGASRRAPRTQWSSA*REESCWAPLQGKGS
Trigger: GCTCCCTTTGCCCTGCAGAGGGGCCCAGCAGCTCTCCTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGCTCTGCGAGAAGCTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476253.1
CDS CCA 90 bp CCCAGCCAGCCCGACAGCAGGTTCTGCACCGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAACACGAAGCACACGGCGAACACCAGA +
Preference number: 5 (lower is better)
Translates to: PSQPDSRFCTVSPAA*NSLGVNTKHTANTR
Trigger: TCTGGTGTTCGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGGCTGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp CGACCACCTGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGGAGGTGCCCAGGACTaGTACCCTGGCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: RPPGVDPGSPGNGSGADAGGAQD*YPGCQA
Trigger: TGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCC...AGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCAGGTGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp GGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCCGGCTGGCGAACCACTaGCCCATGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GRRCVCVCRICPHQQERGRLANH*PMQVRH
Trigger: GTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCG...GCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCGGCTGGCGAACCACTaGCCCATGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGRLANH*PMQVRH
Trigger: GTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS GCA 90 bp CCGCCCAGTAGCGTCAGTTGCGGAACTCGAAATTCATGGGGCGACTaGGAGCCCGGGGTCTCAGCTTCAGACACCCTGGCGTGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PPSSVSCGTRNSWGD*EPGVSASDTLACPP
Trigger: TGGAGGGCACGCCAGGGTGTCTGAAGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCCGCAACTGACGCTACTGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS GCA 90 bp GTGAGGAGCTGCACGGGCAAGTTCGAGTCTGGCGAGAGCTCATGCTaGCGAGACTCCGTCACAGTCAGGTGCACGTCCTGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: VRSCTGKFESGESSC*RDSVTVRCTSCCWA
Trigger: GGCCCAGCAGCAGGACGTGCACCTGACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCAGCTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 90 bp CCCGGAGCTTCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAGCCTaGAGGGAGGAGAGCTGCTGGGCCCCTCAGATGTCAAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGASRRAPRTQWSSA*REESCWAPQMSKAC
Trigger: GCAGGCCTTTGACATCTGAGGGGCCCAGCAGCTCTCCTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGCTCTGCGAGAAGCTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS CCA 90 bp GCTCCCCGTACTCAGTGGAGTTCAGCCTGCAGGGAGGAGAGCTGCTaGGCCCCTCTGCAGGGCAAAGGGAGCGGAAGATGGAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: APRTQWSSACREESC*APLQGKGSGRWRLH
Trigger: GTGTAGCCTCCATCTTCCGCTCCCTTTGCCCTGCAGAGGGGCCCAGCAGCTCTCCTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476253.1
CDS-3UTR CAA 90 bp CTGCTGGCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGAGGTGCCCAGGACTaGTACCCTGGCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LLALACGCLLAGLHQLHAGGAQD*YPGCQA
Trigger: TGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCC...AGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGCCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000460722.1
CDS-3UTR CAA 90 bp TGGGGTAGACCCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGGAGGTGCCCAGGACTaGTACCCTGGCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: WGRPRVSREWLGGRRCVCGGAQD*YPGCQA
Trigger: TGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCC...ACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGGGTCTACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp GGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGACGCCCACCAGAGGCTaGACCACAGGGGGCGTGCAT +
Preference number: 5 (lower is better)
Translates to: GLQGMARGQTLCLCVQDLTPTRG*TTGGVH
Trigger: ATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGT...CAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp AGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCAGGACGCCCACCAGAGGCTaGACCACAGGGGGCGTGCAT +
Preference number: 5 (lower is better)
Translates to: RRCVCVCRICPHQQERGRTPTRG*TTGGVH
Trigger: ATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGCGT...CCTGCCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS TCA 90 bp CTGCAGGGCAAAGGGAGCGGAAGATGGAGGCTACACCCCAAGGAGTaGCAGGGCAGCTGTCGCACCAGGACCAACCAGGAGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: LQGKGSGRWRLHPKE*QGSCRTRTNQERWP
Trigger: GGGCCATCTCTCCTGGTTGGTCCTGGTGCGACAGCTGCCCTGTCACTCCTTGGGGTGTAGCCTCCATCTTCCGCTCCCTTTGCCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476253.1
CDS CCA 90 bp CATGAAGCCCCGCCCAGTAGCGTCAGTTGCGGAACTCGAAATTCATaGGGCGACTGCGAGCCCGGGGTCTCAGCTTCAGACACCCTGGCG +
Preference number: 5 (lower is better)
Translates to: HEAPPSSVSCGTRNS*GDCEPGVSASDTLA
Trigger: CGCCAGGGTGTCTGAAGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCCGCAACTGACGCTACTGGGCGGGGCTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS CCA 90 bp GCTGGCCACACGGATGGTGAGGAGCTGCACGGGCAAGTTCGAGTCTaGCGAGAGCTCATGCTGCCGAGACTCCGTCACAGTCAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: AGHTDGEELHGQVRV*RELMLPRLRHSQVH
Trigger: GTGCACCTGACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCGTGTGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp GCCCACCAGAGGCTTGACCACAGGGGGCGTGCATCCCCTTCTGAGCCTGGGAGACACCGCACCTGTGCATaGAGCACAGGTGGGGAAACT +
Preference number: 5 (lower is better)
Translates to: AHQRLDHRGRASPSEPGRHRTCA*STGGET
Trigger: AGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGTG...TCTCCCAGGCTCAGAAGGGGATGCACGCCCCCTGTGGTCAAGCCTCTGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp GCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGACACCGCACCTGTGCATaGAGCACAGGTGGGGAAACT +
Preference number: 5 (lower is better)
Translates to: ARGQTLCLCVQDLPPPAGHRTCA*STGGET
Trigger: AGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGTG...TCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp AGGCACCAAGGACAGGATGAGAAACCCGGAGGGGCAGCCCCACAAATGAGGGCGGCCGCGTGGAACTCGTaGGGCGTGAACACGAAGCAC +
Preference number: 5 (lower is better)
Translates to: RHQGQDEKPGGAAPQMRAAAWNS*GVNTKH
Trigger: GTGCTTCGTGTTCACGCCCAACGAGTTCCACGCGGC...CGCCCTCATTTGTGGGGCTGCCCCTCCGGGTTTCTCATCCTGTCCTTGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp GGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCACGGCTGGCGAACCACTaGCCCATGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GQENAVQVWHVTEGGYAPRLANH*PMQVRH
Trigger: GTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCG...TGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS GCA 90 bp ATGGTGAGGAGCTGCACGGGCAAGTTCGAGTCTGGCGAGAGCTCATaGTGCCGAGACTCCGTCACAGTCAGGTGCACGTCCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MVRSCTGKFESGESS*CRDSVTVRCTSCCW
Trigger: CCAGCAGCAGGACGTGCACCTGACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCAGCTCCTCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTGCACCGGTGGCAAACTaGTCAATCCGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGAAPVAN*SIRRNS
Trigger: TGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGC...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGCACCGGTGGCAAACTaGTCAATCCGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: GASSRTGQENAVQVWHVTAPVAN*SIRRNS
Trigger: TGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGC...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp CAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTTTGCGGCCTTCCCTGGACTaGTTGGGCAGAAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: QAPGVHHLCLKQPSPGALRPSLD*LGRKRH
Trigger: GTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCG...CAAAGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp GGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCACCAGCAGGAAAGGGGCGGCCTTCCCTGGACTaGTTGGGCAGAAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GQTLCLCVQDLPPPAGKGRPSLD*LGRKRH
Trigger: GTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGGCCG...CCCCTTTCCTGCTGGTGGGGGCAGATCCTGCACACACAGACACAGCGTCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp CACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGGACCCCTGGTGGGCTaGTGTTCTGGATGTCGCTAT +
Preference number: 5 (lower is better)
Translates to: HSPVAASWQVFTSFTLARGPLVG*CSGCRY
Trigger: ATAGCGACATCCAGAACACAAGCCCACCAGGGGTCC...ACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGAGGACCCCTGGTGGGCTaGTGTTCTGGATGTCGCTAT +
Preference number: 5 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGGPLVG*CSGCRY
Trigger: ATAGCGACATCCAGAACACAAGCCCACCAGGGGTCC...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp TGTCAGGCCCCCGGAGTCCATCACCTCTGCCTCAAACAGCCAAGCCCAGGGGCTACCCACTGCCCCTCTTaGGCAGCCCTTGAAACTCAG +
Preference number: 5 (lower is better)
Translates to: CQAPGVHHLCLKQPSPGATHCPS*AALETQ
Trigger: CTGAGTTTCAAGGGCTGCCAAAGAGGGGCAGTGGGT...AGCCCCTGGGCTTGGCTGTTTGAGGCAGAGGTGATGGACTCCGGGGGCCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS TCA 90 bp CTGGTGCACCGGTGGCAAACTTGTCAATCCGCCGGAACTCAGTGTTaGCAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGT +
Preference number: 5 (lower is better)
Translates to: LVHRWQTCQSAGTQC*QRRQQPASQTVGGR
Trigger: ACGCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 90 bp CCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCAGCTCCAGATGTCAAAGGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PPGRSSPASRWHVSA*SLCRPPAPDVKGLH
Trigger: GTGCAGGCCTTTGACATCTGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS GCA 90 bp GCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGTGTCTaGATGCAGCCTATGCAGGCCTCCAGCTCCAGATGTCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: AASWQVFTSFTLARV*MQPMQASSSRCQRP
Trigger: AGGCCTTTGACATCTGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS-3UTR CAA 90 bp TCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCACCGCACCTGTGCATaGAGCACAGGTGGGGAAACT +
Preference number: 5 (lower is better)
Translates to: SPGNGSGADAVSVCAGSAHRTCA*STGGET
Trigger: AGTTTCCCCACCTGTGCTCAATGCACAGGTGCGGTG...GGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp GAAGTAAGGCAAATGGCCCAGATGACGACCACCTGGGGTAGACCCAGGGTCTCCGCCGCGTGGAACTCGTaGGGCGTGAACACGAAGCAC +
Preference number: 5 (lower is better)
Translates to: EVRQMAQMTTTWGRPRVSAAWNS*GVNTKH
Trigger: GTGCTTCGTGTTCACGCCCAACGAGTTCCACGCGGC...GGAGACCCTGGGTCTACCCCAGGTGGTCGTCATCTGGGCCATTTGCCTTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCCGGCTGGCGAACCACTaGCCCATGCAGGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: PKVLSLLQTQGRGELLYIRLANH*PMQVRH
Trigger: GTGCCTCACCTGCATGGGCAAGTGGTTCGCCAGCCG...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp GCACTCGCCTGTGGCTGCCTCCTGGCAGGTCTTCACCAGCTTCACGCTGGCACGCCTTCCCTGGACTTGTaGGGCAGAAAAAGGCACCAA +
Preference number: 5 (lower is better)
Translates to: ALACGCLLAGLHQLHAGTPSLDL*GRKRHQ
Trigger: TTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGG...CGTGCCAGCGTGAAGCTGGTGAAGACCTGCCAGGAGGCAGCCACAGGCGAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS CCA 90 bp CAGTCAGGTGCACGTCCTGCTGCTGGGCCACGTGCACTCGGTAGGTaGTTACCTTCATCACCCACGTGTCTGTCACAATCACACGGGCAC +
Preference number: 5 (lower is better)
Translates to: QSGARPAAGPRALGR*LPSSPTCLSQSHGH
Trigger: GTGCCCGTGTGATTGTGACAGACACGTGGGTGATGAAGGTAACCACCTACCGAGTGCACGTGGCCCAGCAGCAGGACGTGCACCTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp TCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCCAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SREWLGGRRCVCVCRICPQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...GGGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp CTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATCTGCCCCAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: LQGMARGQTLCLCVQDLPQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...GGGCAGATCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp TCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTGCTGGAGGTGCCCAGGACTaGTACCCTGGCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSAFCRPRAEASCSTSCAGGAQD*YPGCQA
Trigger: TGCTTGGCAGCCAGGGTACAAGTCCTGGGCACCTCC...AGCACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGGGAATGGCTCGGGGGCAGACGCTGTGTCTGTGTGTGCAGGATGTCGCTATGGCACTTaGGTCCTCAACTCAAACCCC +
Preference number: 5 (lower is better)
Translates to: PGSPGNGSGADAVSVCAGCRYGT*VLNSNP
Trigger: GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACA...TCCTGCACACACAGACACAGCGTCTGCCCCCGAGCCATTCCCTGGAGACCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp GGGGCCAGCTCCAGGACAGGGCAGGAGAATGCGGTCCAGGTCTGGCACGTAACTTGTCGCTATGGCACTTaGGTCCTCAACTCAAACCCC +
Preference number: 5 (lower is better)
Translates to: GASSRTGQENAVQVWHVTCRYGT*VLNSNP
Trigger: GGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACA...AGTTACGTGCCAGACCTGGACCGCATTCTCCTGCCCTGTCCTGGAGCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS-3UTR CAA 90 bp CAGGAGAATGCGGTCCAGGTCTGGCACGTAACTGAGGGTGGGTATGCTCCAGAGGCACCGGTGGCAAACTaGTCAATCCGCCGGAACTCA +
Preference number: 5 (lower is better)
Translates to: QENAVQVWHVTEGGYAPEAPVAN*SIRRNS
Trigger: TGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGC...CTCTGGAGCATACCCACCCTCAGTTACGTGCCAGACCTGGACCGCATTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp GAACTCAGTGTTGACAGAGGAGGCAACAGCCTGCCAGCCAGACTGTGGGAGGGCGGAGATGGTGAGGAGTaGCACCAGCAGGTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: ELSVDRGGNSLPARLWEGGDGEE*HQQVPV
Trigger: AACTGGAACCTGCTGGTGCAACTCCTCACCATCTCC...GCCCTCCCACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 90 bp CCAGCAGGTTCCAGTTGGCAAAAAGTAATAGTCCACATTTGGAGTTaGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAACAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: PAGSSWQKVIVHIWS*PSHERQQRVAQQRG
Trigger: GCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGAACCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CAA 90 bp CCCTGCTGCCTTCACCTGCTGAGCGCTCTAGGAAGCCTCCCAAATCCCAAGTGTCCTTCCCTGGACTTGTaGGGCAGAAAAAGGCACCAA +
Preference number: 5 (lower is better)
Translates to: PCCLHLLSALGSLPNPKCPSLDL*GRKRHQ
Trigger: TTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGG...ACACTTGGGATTTGGGAGGCTTCCTAGAGCGCTCAGCAGGTGAAGGCAGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS GCA 90 bp TACCTTCATCACCCACGTGTCTGTCACAATCACACGGGCACCTGGTaGACCGGTGGCAAACTTGTCAATCCGCCGGAACTCAGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: YLHHPRVCHNHTGTW*TGGKLVNPPELSVD
Trigger: GTCAACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATTGTGACAGACACGTGGGTGATGAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 90 bp GGTTACCTTCATCACCCACGTGTCTGTCACAATCACACGGGCACCTaGTGCACCGGTGGCAAACTTGTCAATCCGCCGGAACTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: GYLHHPRVCHNHTGT*CTGGKLVNPPELSV
Trigger: AACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATTGTGACAGACACGTGGGTGATGAAGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 90 bp GATGGGACATGTCCAGAGGACACGGAGCCAGCTTCAGGGCCCTGCTaGCCAGATCGAGGACAATTTGAAGGTCCAAATAAGCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: DGTCPEDTEPASGPC*PDRGQFEGPNKPWR
Trigger: TCTCCATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGGCTCCGTGTCCTCTGGACATGTCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CAA 90 bp CCAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCCCTTCCCTGGACTTGTaGGGCAGAAAAAGGCACCAA +
Preference number: 5 (lower is better)
Translates to: PKVLSLLQTQGRGELLYIPSLDL*GRKRHQ
Trigger: TTGGTGCCTTTTTCTGCCCAACAAGTCCAGGGAAGG...GATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS-3UTR CAA 90 bp GGCTTGTGTTCTGGATGTCGCTATGGCACTTTGGTCCTCAACTCAAACCCCCACACCCACTGCCCCTCTTaGGCAGCCCTTGAAACTCAG +
Preference number: 5 (lower is better)
Translates to: GLCSGCRYGTLVLNSNPHTHCPS*AALETQ
Trigger: CTGAGTTTCAAGGGCTGCCAAAGAGGGGCAGTGGGT...GTGGGGGTTTGAGTTGAGGACCAAAGTGCCATAGCGACATCCAGAACACAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303277.6
ENST00000382936.8
CDS GCA 90 bp AATGATGGGACATGTCCAGAGGACACGGAGCCAGCTTCAGGGCCCTaGTGGCCAGATCGAGGACAATTTGAAGGTCCAAATAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: NDGTCPEDTEPASGP*WPDRGQFEGPNKPW
Trigger: CCATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGGCTCCGTGTCCTCTGGACATGTCCCATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 90 bp GTTGCACCAGCAGGTTCCAGTTGGCAAAAAGTAATAGTCCACATTTaGAGTTGGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAACAG +
Preference number: 5 (lower is better)
Translates to: VAPAGSSWQKVIVHI*SWPSHERQQRVAQQ
Trigger: CTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGAACCTGCTGGTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CAA 90 bp CAAAAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCACAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: QKSSAFCRPRAEASCSTSQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...TGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS-3UTR CAA 90 bp AAGTCCTCAGCCTTCTGCAGACCCAGGGCAGAGGCGAGTTGCTCTACATCATGTCAGGGCAGAGGCGAGTaGCTCTACATCATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: KSSAFCRPRAEASCSTSCQGRGE*LYIMCF
Trigger: AAAGCACATGATGTAGAGCAACTCGCCTCTGCCCTG...ACATGATGTAGAGCAACTCGCCTCTGCCCTGGGTCTGCAGAAGGCTGAGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000460722.1
ENST00000536901.1
CDS TCA 90 bp AGAGCTGAAAAGTTATGTGCGAGAAAGGAAGCAAGTCTCAAAGAATaGTGGGACATGTCCAGAGGACACGGAGCCAGCTTCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RAEKLCARKEASLKE*WDMSRGHGASFRAL
Trigger: CAGGGCCCTGAAGCTGGCTCCGTGTCCTCTGGACATGTCCCATCATTCTTTGAGACTTGCTTCCTTTCTCGCACATAACTTTTCAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS TCA 90 bp CCAGATCGAGGACAATTTGAAGGTCCAAATAAGCCATGGAGATGGTaGGGAGTTGCACCAGCAGGTTCCAGTTGGCAAAAAGTAATAGTC +
Preference number: 5 (lower is better)
Translates to: PDRGQFEGPNKPWRW*GVAPAGSSWQKVIV
Trigger: GACTATTACTTTTTGCCAACTGGAACCTGCTGGTGCAACTCCTCACCATCTCCATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS-3UTR CAA 90 bp CCCTGCCTGTGGCAAAGGCAGGATATATTAGCGGAAAAGGTTTTTAATTTGCTGCAGATCGAGGACAATTaGAAGGTCCAAATAAGCCAT +
Preference number: 5 (lower is better)
Translates to: PCLWQRQDILAEKVFNLLQIEDN*KVQISH
Trigger: ATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTG...CAGCAAATTAAAAACCTTTTCCGCTAATATATCCTGCCTTTGCCACAGGCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS GCA 72 bp GCGTCCTCGCTGCCCAGCCAGCCCGACAGCAGGTTCTaGACCGTGAGCCCCGCCGCGTGGAACTCGTTGGGC +
Preference number: 6 (lower is better)
Translates to: ASSLPSQPDSRF*TVSPAAWNSLG
Trigger: GCCCAACGAGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGGCTGGCTGGGCAGCGAGGACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000480360.1
ENST00000536901.1
CDS GCA 72 bp GCGGCAGCAGCGAGTGGCACAACAGCGTGGCGGCCGTaGGGCGCAAGTGGAAGGGCACGAAGGCGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: AAAASGTTAWRP*GASGRARRRRP
Trigger: AGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000480360.1
ENST00000536901.1
CDS CCA 72 bp CCCCGTGCGGGTGCGGCCTCTCTTCTCGGCCGGCCCTaGAGGCGGCACCGCACCTGTGCATTGAGCACAGGT +
Preference number: 6 (lower is better)
Translates to: PRAGAASLLGRP*RRHRTCALSTG
Trigger: ACCTGTGCTCAATGCACAGGTGCGGTGCCGCCTCCAGGGCCGGCCGAGAAGAGAGGCCGCACCCGCACGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 72 bp GAGTGGCACAACAGCGTGGCGGCCGTGCGGCGCAAGTaGAAGGGCACGAAGGCGGCGTCCTCGCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: EWHNSVAAVRRK*KGTKAASSLPS
Trigger: GCTGGGCAGCGAGGACGCCGCCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000480360.1
ENST00000536901.1
CDS CCA 72 bp AGTAGCCGAGCGGCAGCAGCGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGTGGAAGGGCACGAAGG +
Preference number: 6 (lower is better)
Translates to: SSRAAAASGTTA*RPCGASGRARR
Trigger: CCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGGCTACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 72 bp CAGTCACGAGCGGCAGCAGCGAGTGGCACAACAGCGTaGCGGCCGTGCGGCGCAAGTGGAAGGGCACGAAGG +
Preference number: 6 (lower is better)
Translates to: QSRAAAASGTTA*RPCGASGRARR
Trigger: CCTTCGTGCCCTTCCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 72 bp CCCGACAGCAGGTTCTGCACCGTGAGCCCCGCCGCGTaGAACTCGTTGGGCGTGAACACGAAGCACACGGCG +
Preference number: 6 (lower is better)
Translates to: PDSRFCTVSPAA*NSLGVNTKHTA
Trigger: CGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCACGGTGCAGAACCTGCTGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 72 bp TTTGGAGTTGGCCCAGTCACGAGCGGCAGCAGCGAGTaGCACAACAGCGTGGCGGCCGTGCGGCGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: FGVGPVTSGSSE*HNSVAAVRRKW
Trigger: CCACTTGCGCCGCACGGCCGCCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS GCA 72 bp GGCCCTGGCCATGAAGCCCCGCCCAGTAGCGTCAGTTaGGGAACTCGAAATTCATGGGGCGACTGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GPGHEAPPSSVS*GTRNSWGDCEP
Trigger: GGGCTCGCAGTCGCCCCATGAATTTCGAGTTCCGCAACTGACGCTACTGGGCGGGGCTTCATGGCCAGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 72 bp GGGCGTGGAGCCGCTTTTCTGAAGCCGCAAGGCACATaGCCACATAGTAGCCGAGCGGCAGCAGCGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GRGAAFLKPQGT*PHSSRAAAASG
Trigger: GCCACTCGCTGCTGCCGCTCGGCTACTATGTGGGCATGTGCCTTGCGGCTTCAGAAAAGCGGCTCCACGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS TCA 72 bp ACACGAAGCACACGGCGAACACCAGATAGGCGAGAGTaGAGGTCACCTCGGGGCTGTCCATCGCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: TRSTRRTPDRRE*RSPRGCPSRSR
Trigger: GCGGCTGCGCGATGGACAGCCCCGAGGTGACCTTCACTCTCGCCTATCTGGTGTTCGCCGTGTGCTTCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CAA 72 bp AGGTTCTGCACCGTGAGCCCCGCCGCGTGGAACTCGTaGGGCGTGAACACGAAGCACACGGCGAACACCAGA +
Preference number: 6 (lower is better)
Translates to: RFCTVSPAAWNS*GVNTKHTANTR
Trigger: TCTGGTGTTCGCCGTGTGCTTCGTGTTCACGCCCAACGAGTTCCACGCGGCGGGGCTCACGGTGCAGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CAA 72 bp TGGGCCCCTCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: WAPQMSKACTAG*VLATRMVRSCT
Trigger: CGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGAGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS CAA 90 bp GAGAGCTGCTGGGCCCCTCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACGGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: ESCWAPQMSKACTAG*VLATRMVRSCTGKF
Trigger: GAACTTGCCCGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGAGGGGCCCAGCAGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS GCA 72 bp AGCGTCAGTTGCGGAACTCGAAATTCATGGGGCGACTaGGAGCCCGGGGTCTCAGCTTCAGACACCCTGGCG +
Preference number: 6 (lower is better)
Translates to: SVSCGTRNSWGD*EPGVSASDTLA
Trigger: CGCCAGGGTGTCTGAAGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCCGCAACTGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS GCA 72 bp TGCACGGGCAAGTTCGAGTCTGGCGAGAGCTCATGCTaGCGAGACTCCGTCACAGTCAGGTGCACGTCCTGC +
Preference number: 6 (lower is better)
Translates to: CTGKFESGESSC*RDSVTVRCTSC
Trigger: GCAGGACGTGCACCTGACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 72 bp AGCTGCACGGGCAAGTTCGAGTCTGGCGAGAGCTCATaGTGCCGAGACTCCGTCACAGTCAGGTGCACGTCC +
Preference number: 6 (lower is better)
Translates to: SCTGKFESGESS*CRDSVTVRCTS
Trigger: GGACGTGCACCTGACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 72 bp TCTCGCAGAGCTCCCCGTACTCAGTGGAGTTCAGCCTaGAGGGAGGAGAGCTGCTGGGCCCCTCAGATGTCA +
Preference number: 6 (lower is better)
Translates to: SRRAPRTQWSSA*REESCWAPQMS
Trigger: TGACATCTGAGGGGCCCAGCAGCTCTCCTCCCTGCAGGCTGAACTCCACTGAGTACGGGGAGCTCTGCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460722.1
CDS CCA 72 bp CCGCCCAGTAGCGTCAGTTGCGGAACTCGAAATTCATaGGGCGACTGCGAGCCCGGGGTCTCAGCTTCAGAC +
Preference number: 6 (lower is better)
Translates to: PPSSVSCGTRNS*GDCEPGVSASD
Trigger: GTCTGAAGCTGAGACCCCGGGCTCGCAGTCGCCCCATGAATTTCGAGTTCCGCAACTGACGCTACTGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CAA 72 bp CTCCAGCTCCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: LQLQMSKACTAG*VLATRMVRSCT
Trigger: CGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGGAGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS CAA 90 bp TATGCAGGCCTCCAGCTCCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACGGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: YAGLQLQMSKACTAG*VLATRMVRSCTGKF
Trigger: GAACTTGCCCGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGGAGCTGGAGGCCTGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS GCA 72 bp CCAGCTTCACGCTGGCACGTGTCTGCATGCAGCCTATaGAGGCCTCCAGCTCCAGATGTCAAAGGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PASRWHVSACSL*RPPAPDVKGLH
Trigger: GTGCAGGCCTTTGACATCTGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS CCA 72 bp ACGGATGGTGAGGAGCTGCACGGGCAAGTTCGAGTCTaGCGAGAGCTCATGCTGCCGAGACTCCGTCACAGT +
Preference number: 6 (lower is better)
Translates to: TDGEELHGQVRV*RELMLPRLRHS
Trigger: ACTGTGACGGAGTCTCGGCAGCATGAGCTCTCGCCAGACTCGAACTTGCCCGTGCAGCTCCTCACCATCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CAA 72 bp GAGTTCAGCCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: EFSQMSKACTAG*VLATRMVRSCT
Trigger: CGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGGCTGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382936.8
ENST00000536901.1
CDS CAA 90 bp TACTCAGTGGAGTTCAGCCAGATGTCAAAGGCCTGCACAGCAGGGTaGGTGCTGGCCACACGGATGGTGAGGAGCTGCACGGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: YSVEFSQMSKACTAG*VLATRMVRSCTGKF
Trigger: GAACTTGCCCGTGCAGCTCCTCACCATCCGTGTGGCCAGCACCAACCCTGCTGTGCAGGCCTTTGACATCTGGCTGAACTCCACTGAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382936.8
ENST00000536901.1
CDS CAA 90 bp GTGTCTGTCACAATCACACGGGCACCTGGTGCACCGGTGGCAAACTaGTCAATCCGCCGGAACTCAGTGTTGACAGAGGAGGCAACAGCC +
Preference number: 6 (lower is better)
Translates to: VSVTITRAPGAPVAN*SIRRNSVLTEEATA
Trigger: GGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATTGTGACAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS TCA 72 bp CGGTGGCAAACTTGTCAATCCGCCGGAACTCAGTGTTaGCAGAGGAGGCAACAGCCTGCCAGCCAGACTGTG +
Preference number: 6 (lower is better)
Translates to: RWQTCQSAGTQC*QRRQQPASQTV
Trigger: CACAGTCTGGCTGGCAGGCTGTTGCCTCCTCTGTCAACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CCA 72 bp CATCACCCACGTGTCTGTCACAATCACACGGGCACCTaGTGCACCGGTGGCAAACTTGTCAATCCGCCGGAA +
Preference number: 6 (lower is better)
Translates to: HHPRVCHNHTGT*CTGGKLVNPPE
Trigger: TTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATTGTGACAGACACGTGGGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS GCA 72 bp AGGTCTTCACCAGCTTCACGCTGGCACGTGTCTGCATaGAGCCTATGCAGGCCTCCAGCTCCAGATGTCAAA +
Preference number: 6 (lower is better)
Translates to: RSSPASRWHVSA*SLCRPPAPDVK
Trigger: TTTGACATCTGGAGCTGGAGGCCTGCATAGGCTGCATGCAGACACGTGCCAGCGTGAAGCTGGTGAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303277.6
CDS CAA 72 bp ACAATCACACGGGCACCTGGTGCACCGGTGGCAAACTaGTCAATCCGCCGGAACTCAGTGTTGACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TITRAPGAPVAN*SIRRNSVLTEE
Trigger: CTCCTCTGTCAACACTGAGTTCCGGCGGATTGACAAGTTTGCCACCGGTGCACCAGGTGCCCGTGTGATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303277.6
ENST00000382936.8
ENST00000536901.1
CDS CAA 90 bp ACCAGCAGGTTCCAGTTGGCAAAAAGTAATAGTCCACATTTGGAGTaGGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAACAGCGTGG +
Preference number: 6 (lower is better)
Translates to: TSRFQLAKSNSPHLE*AQSRAAAASGTTAW
Trigger: CCACGCTGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGAACCTGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CAA 90 bp ACACGGAGCCAGCTTCAGGGCCCTGCTGGCCAGATCGAGGACAATTaGAAGGTCCAAATAAGCCATGGAGATGGTGAGGAGTTGCACCAG +
Preference number: 6 (lower is better)
Translates to: TRSQLQGPAGQIEDN*KVQISHGDGEELHQ
Trigger: CTGGTGCAACTCCTCACCATCTCCATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGGCTCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS GCA 72 bp ACATGTCCAGAGGACACGGAGCCAGCTTCAGGGCCCTaGTGGCCAGATCGAGGACAATTTGAAGGTCCAAAT +
Preference number: 6 (lower is better)
Translates to: TCPEDTEPASGP*WPDRGQFEGPN
Trigger: ATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGGCTCCGTGTCCTCTGGACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 72 bp TGTCCAGAGGACACGGAGCCAGCTTCAGGGCCCTGCTaGCCAGATCGAGGACAATTTGAAGGTCCAAATAAG +
Preference number: 6 (lower is better)
Translates to: CPEDTEPASGPC*PDRGQFEGPNK
Trigger: CTTATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTGGCTCCGTGTCCTCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CAA 72 bp CAGCTTCAGGGCCCTGCTGGCCAGATCGAGGACAATTaGAAGGTCCAAATAAGCCATGGAGATGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: QLQGPAGQIEDN*KVQISHGDGEE
Trigger: CTCCTCACCATCTCCATGGCTTATTTGGACCTTCAAATTGTCCTCGATCTGGCCAGCAGGGCCCTGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CAA 90 bp AGTTGCACCAGCAGGTTCCAGTTGGCAAAAAGTAATAGTCCACATTaGGAGTTGGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAACA +
Preference number: 6 (lower is better)
Translates to: SCTSRFQLAKSNSPH*ELAQSRAAAASGTT
Trigger: TGTTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGAACCTGCTGGTGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CCA 72 bp TCCAGTTGGCAAAAAGTAATAGTCCACATTTGGAGTTaGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACAA +
Preference number: 6 (lower is better)
Translates to: SSWQKVIVHIWS*PSHERQQRVAQ
Trigger: TTGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS CAA 72 bp TTCCAGTTGGCAAAAAGTAATAGTCCACATTTGGAGTaGGCCCAGTCACGAGCGGCAGCAGCGAGTGGCACA +
Preference number: 6 (lower is better)
Translates to: FQLAKSNSPHLE*AQSRAAAASGT
Trigger: TGTGCCACTCGCTGCTGCCGCTCGTGACTGGGCCAACTCCAAATGTGGACTATTACTTTTTGCCAACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS TCA 72 bp AAGTTATGTGCGAGAAAGGAAGCAAGTCTCAAAGAATaGTGGGACATGTCCAGAGGACACGGAGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KLCARKEASLKE*WDMSRGHGASF
Trigger: GAAGCTGGCTCCGTGTCCTCTGGACATGTCCCATCATTCTTTGAGACTTGCTTCCTTTCTCGCACATAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1
CDS TCA 72 bp GGACAATTTGAAGGTCCAAATAAGCCATGGAGATGGTaGGGAGTTGCACCAGCAGGTTCCAGTTGGCAAAAA +
Preference number: 6 (lower is better)
Translates to: GQFEGPNKPWRW*GVAPAGSSWQK
Trigger: TTTTTGCCAACTGGAACCTGCTGGTGCAACTCCTCACCATCTCCATGGCTTATTTGGACCTTCAAATTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480360.1