RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM121 (Homo sapiens)

Ensembl gene IDs: ENSG00000184986

Ensembl transcript IDs: ENST00000392519.7, ENST00000431372.1, ENST00000552019.1

Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCTCTaGTCTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGG +
Preference number: 1 (lower is better)
Translates to: PFQPGRPSRQGPDHL*SAPAQASQTDPRAG
Trigger: CCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAGAGCAGAGGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR TCA 90 bp GGGCTGGTGGAGCGGGGGCTGAGGATCCGCGGTCCGAGAGATTCCTaGGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAG +
Preference number: 1 (lower is better)
Translates to: GLVERGLRIRGPRDS*DEEAAAGPQARALE
Trigger: CTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGGAATCTCTCGGACCGCGGATCCTCAGCCCCCGCTCCACCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR TCA 90 bp TCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGGGGCTaGGGATCCGCGGTCCGAGAGATTCCTGAGATGAAGAAGCGGCCG +
Preference number: 1 (lower is better)
Translates to: SQTDPRAGAGWWSGG*GSAVREIPEMKKRP
Trigger: CGGCCGCTTCTTCATCTCAGGAATCTCTCGGACCGCGGATCCTCAGCCCCCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR-3UTR GCA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGCCAACCCGGTGTCTCTaGGCCCCAGGGGCGTGTCGG +
Preference number: 2 (lower is better)
Translates to: LRPRPPKQTHALGRAGGAPTRCL*APGACR
Trigger: CCGACACGCCCCTGGGGCGCAGAGACACCGGGTTGG...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR-3UTR GCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGCCAACCCGGTGTCTCTaGGCCCCAGGGGCGTGTCGG +
Preference number: 2 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERPTRCL*APGACR
Trigger: CCGACACGCCCCTGGGGCGCAGAGACACCGGGTTGG...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR-3UTR TCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGTCCGAGAGATTCCTaGGATGAAGAAGCGGCCGCG +
Preference number: 2 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGPRDS*DEEAAA
Trigger: CGCGGCCGCTTCTTCATCTCAGGAATCTCTCGGACC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR GCA 72 bp CCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCTCTaGTCTGCTCCGGCCCAGGCCTCCCAAACAGACCCA +
Preference number: 3 (lower is better)
Translates to: PGRPSRQGPDHL*SAPAQASQTDP
Trigger: TGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAGAGCAGAGGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
3UTR GCA 72 bp GAGGCCCCCACCGAAGGAGCAGATCTCCGCCCACACTaGCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: EAPTEGADLRPH*PPFQPGRPSRQ
Trigger: CTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTGGGCGGAGATCTGCTCCTTCGGTGGGGGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCCTCAGCCAGCGGGCATaGCGCGACACGGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: AAGPQARALEAPVPRGARLSQRA*RDTARR
Trigger: TCGCCGGGCCGTGTCGCGCCATGCCCGCTGGCTGAG...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCTGGTGGAGCGGGGGCTaGGGATCCGCGGTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: AAGPQARALEAPVPRGARWWSGG*GSAVRE
Trigger: CTCTCGGACCGCGGATCCTCAGCCCCCGCTCCACCA...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCCGGGCCGGATCACCTCTaGTCTGCTCCGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRDPRHGHSRHLSLGEPAGPDHL*SAPAQA
Trigger: GGCCTGGGCCGGAGCAGAGCAGAGGTGATCCGGCCC...GGCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGTGGCGTAGCCGCGCTTaGCCGTGCGCACCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERWRSRA*PCAPRR
Trigger: GCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCA...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCAACAGACCCACGCGCTaGGGCGGGCTGGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AAGPQARALEAPVPRGARNRPTR*GGLVER
Trigger: CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTT...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCCCCTTGGCCCCAAATCTaGGCCAGAGGCCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: PRDPRHGHSRHLSLGEPAPWPQI*ARGPHR
Trigger: TCGGTGGGGGCCTCTGGCTCAGATTTGGGGCCAAGG...GGCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGACCAACCCGGTGTCTCTaGGCCCCAGGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LLRPRPPKQTHALGRAGGPTRCL*APGACR
Trigger: CCGACACGCCCCTGGGGCGCAGAGACACCGGGTTGG...TCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGGCCGGATCACCTCTaGTCTGCTCCGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGPDHL*SAPAQA
Trigger: GGCCTGGGCCGGAGCAGAGCAGAGGTGATCCGGCCC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCCCAGGGGGTCACGCGTaGGCGAGGACATGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITPGGHA*ARTCGG
Trigger: GCCCCCACATGTCCTCGCCCACGCGTGACCCCCTGG...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGAACAGACCCACGCGCTaGGGCGGGCTGGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CSGPGLPNRPTRWGGLVENRPTR*GGLVER
Trigger: CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTT...CTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCCTGCACACGCCGATCTTaGGCGGGCCCTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRDPRHGHSRHLSLGEPACTRRS*AGPGSA
Trigger: AGCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCA...GGCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCTGCGCACGTACTCCATaGGGTCCAGCGCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: AAGPQARALEAPVPRGARCARTP*GPAPRA
Trigger: TGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCA...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCGGTACTCCAGGAAGGTaGAGGCCTTGGTGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: AAGPQARALEAPVPRGARGTPGR*RPWWRA
Trigger: CGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACC...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGTGCGGGGGTGGCGGCTaGAGCTCCAGTGATAGCGCA +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERCGGGG*SSSDSA
Trigger: TGCGCTATCACTGGAGCTGCAGCCGCCACCCCCGCA...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCTGCGGGGGTGGCGGCTaGAGCTCCAGTGATAGCGCA +
Preference number: 4 (lower is better)
Translates to: APAQASQTDPRAGAGWWSCGGGG*SSSDSA
Trigger: TGCGCTATCACTGGAGCTGCAGCCGCCACCCCCGCA...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGGATCTCCGCCCACACTaGCCTCCCTTCCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERDLRPH*PPFQPG
Trigger: CCCGGGTTGGAAGGGAGGGCAGTGTGGGCGGAGATC...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCGGAACCACAGGATCATaGCGTAGCCGCGCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: AAAGPQARALEAPVPRGAGTTGS*RSRAWP
Trigger: CGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCC...GGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGCGGCTCCCACAGGCTaGCCTGCATGTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRPRPPKQTHALGRAGGAAAPTG*PACPAG
Trigger: ACCTGCTGGACATGCAGGCCAGCCTGTGGGAGCCGC...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGGGGAAGTCGCGCACCTaGCGGCGGTACTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERGKSRT*RRYSRK
Trigger: CTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCC...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCCGCCCACCAGCACGATaGTGCACACGCCGATCTTGC +
Preference number: 4 (lower is better)
Translates to: APAQASQTDPRAGAGWWSRPPAR*CTRRSC
Trigger: GCAAGATCGGCGTGTGCATCATCGTGCTGGTGGGCG...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTGGTGGAGCGGGGGCTaGGGATCCGCGGTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLWWSGG*GSAVRE
Trigger: CTCTCGGACCGCGGATCCTCAGCCCCCGCTCCACCA...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGACCTTGGCCCCAAATCTaGGCCAGAGGCCCCCACCGA +
Preference number: 4 (lower is better)
Translates to: LLRPRPPKQTHALGRAGGPWPQI*ARGPHR
Trigger: TCGGTGGGGGCCTCTGGCTCAGATTTGGGGCCAAGG...TCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCTGCGCACGTACTCCATaGGGTCCAGCGCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: APAQASQTDPRAGAGWWSCARTP*GPAPRA
Trigger: TGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCA...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGGCAGGTCCTCGCGCTTaGGGAAGGTGCGCACGTACT +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERAGPRA*GRCART
Trigger: AGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGC...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCTTCTGCGGCGCTATGTaGTCGCCCTGCATGCTGACC +
Preference number: 4 (lower is better)
Translates to: AAAGPQARALEAPVPRGAFCGAM*SPCMLT
Trigger: GGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAA...GGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGCCAACCCGGTGTCTCTaGGCCCCAGGGGCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLPTRCL*APGACR
Trigger: CCGACACGCCCCTGGGGCGCAGAGACACCGGGTTGG...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTACTCAGCCAGCGGGCATaGCGCGACACGGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLLSQRA*RDTARR
Trigger: TCGCCGGGCCGTGTCGCGCCATGCCCGCTGGCTGAG...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGGCGGCTCCCACAGGCTaGCCTGCATGTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSGPGLPNRPTRWGGLVEAAPTG*PACPAG
Trigger: ACCTGCTGGACATGCAGGCCAGCCTGTGGGAGCCGC...CTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCGGAACAGCGCCATGTTaGCGGCGCGCGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSGTAPC*RRAPAR
Trigger: CCGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCC...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGGGAACAGCGCCATGTTaGCGGCGCGCGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLGTAPC*RRAPAR
Trigger: CCGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCC...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGAAGGTGCAGGCCTTaGTGGCGAGCGCCACCACGT +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGRCRP*WRAPPR
Trigger: ACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGGAAGTCGCGCACCTaGCGGCGGTACTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGKSRT*RRYSRK
Trigger: CTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGCCAGGGGGTCACGCGTaGGCGAGGACATGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLPGGHA*ARTCGG
Trigger: GCCCCCACATGTCCTCGCCCACGCGTGACCCCCTGG...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGACGCCCACCAGCACGATaGTGCACACGCCGATCTTGC +
Preference number: 4 (lower is better)
Translates to: LLRPRPPKQTHALGRAGGRPPAR*CTRRSC
Trigger: GCAAGATCGGCGTGTGCATCATCGTGCTGGTGGGCG...TCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGATCCCACAGGCTGGCCTaGATGTCCAGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLRPRPPKQTHALGRAGGSHRLA*MSSRSS
Trigger: GCTGGACCTGCTGGACATGCAGGCCAGCCTGTGGGA...TCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGCTATGTGCTCGCCCTaGATGCTGACCTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRPRPPKQTHALGRAGGAAMCSP*MLTSLS
Trigger: GCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGC...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGTACTCCAGGAAGGTaGAGGCCTTGGTGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGTPGR*RPWWRA
Trigger: CGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCGGAACCACAGGATCATaGCGTAGCCGCGCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITGTTGS*RSRAWP
Trigger: CGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCC...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCAGGTGCAGGCCTTGGTaGCGAGCGCCACCACGTTTT +
Preference number: 4 (lower is better)
Translates to: APAQASQTDPRAGAGWWSRCRPW*RAPPRF
Trigger: AAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCT...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGAGGTGCAGGCCTTGGTaGCGAGCGCCACCACGTTTT +
Preference number: 4 (lower is better)
Translates to: SGPGLPNRPTRWGGLVERRCRPW*RAPPRF
Trigger: AAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCT...CCGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGCGGCCATGCTGCCCATaGTCACCAGCGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLRPCCP*SPAWSG
Trigger: GCCTGACCACGCTGGTGATCATGGGCAGCATGGCCG...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCGGCCATGCTGCCCATaGTCACCAGCGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSRPCCP*SPAWSG
Trigger: GCCTGACCACGCTGGTGATCATGGGCAGCATGGCCG...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CTGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGGTCCGAGAGATTCCTaGGATGAAGAAGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLRPRPPKQTHALGRAGGGPRDS*DEEAAA
Trigger: CGCGGCCGCTTCTTCATCTCAGGAATCTCTCGGACC...TCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCCTACAGCATCATCTTCTaGGGCGCTATGTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PRDPRHGHSRHLSLGEPAYSIIF*GAMCSP
Trigger: GGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTA...GGCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGCGCCACCACGTTTTTaGCGACGAAGATGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: APAQASQTDPRAGAGWWSAPPRF*RRRWPR
Trigger: TCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGC...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCATCTTGCGCGGGCCCTaGTTCTGCTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITILRGP*FCSTRY
Trigger: GTACCTGGTGGAGCAGAACCAGGGCCCGCGCAAGAT...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGTTTTGCCGACGAAGATaGCCGAGACACGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LRPRPPKQTHALGRAGGAFCRRR*PRHGCP
Trigger: GGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAA...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCGGAAGGTGCAGGCCTTaGTGGCGAGCGCCACCACGT +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSGRCRP*WRAPPR
Trigger: ACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCC...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp GCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCACGAGTCTTTAAAATaGCAGAGGCCTCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAGPQARALEAPVPRGAHESLK*QRPPWP
Trigger: GGGCCAAGGAGGCCTCTGTCATTTTAAAGACTCGTG...GGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCTGCACACGCCGATCTTaGGCGGGCCCTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSCTRRS*AGPGSA
Trigger: AGCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCA...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCGCGCTTGCGGAAGGTaGGCACGTACTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSRACGR*ARTPCG
Trigger: ACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCG...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCACAGGCTGGCCTaGATGTCCAGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLSHRLA*MSSRSS
Trigger: GCTGGACCTGCTGGACATGCAGGCCAGCCTGTGGGA...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGATCTCCGCCCACACTaGCCTCCCTTCCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLDLRPH*PPFQPG
Trigger: CCCGGGTTGGAAGGGAGGGCAGTGTGGGCGGAGATC...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp TGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGTTTTGCCGACGAAGATaGCCGAGACACGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CSGPGLPNRPTRWGGLVEFCRRR*PRHGCP
Trigger: GGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAA...CTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAAGCAGTAGAAGAAGGTaGGGCCCTCGGCCCACAGCG +
Preference number: 4 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLSSRRR*GPRPTA
Trigger: CGCTGTGGGCCGAGGGCCTCACCTTCTTCTACTGCT...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGGGTCCGAGAGATTCCTaGGATGAAGAAGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLGPRDS*DEEAAA
Trigger: CGCGGCCGCTTCTTCATCTCAGGAATCTCTCGGACC...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGCAGGTCCTCGCGCTTaGGGAAGGTGCGCACGTACT +
Preference number: 4 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLAGPRA*GRCART
Trigger: AGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGC...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGGCTATGTGCTCGCCCTaGATGCTGACCTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLAMCSP*MLTSLS
Trigger: GCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGC...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGATCTTGCGCGGGCCCTaGTTCTGCTCCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLILRGP*FCSTRY
Trigger: GTACCTGGTGGAGCAGAACCAGGGCCCGCGCAAGAT...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR TCA 90 bp CACACTGCCCTCCCTTCCAACCCGGGCGGCCCAGCAGGCAGGGGCCGGATCACCCACGAGTCTTTAAAATaGCAGAGGCCTCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HTALPSNPGGPAGRGRITHESLK*QRPPWP
Trigger: GGGCCAAGGAGGCCTCTGTCATTTTAAAGACTCGTG...GGTGATCCGGCCCCTGCCTGCTGGGCCGCCCGGGTTGGAAGGGAGGGCAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTATTCTGCGGCGCTATGTaGTCGCCCTGCATGCTGACC +
Preference number: 4 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLFCGAM*SPCMLT
Trigger: GGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAA...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCGCGCCACCACGTTTTTaGCGACGAAGATGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSAPPRF*RRRWPR
Trigger: TCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGC...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR GCA 90 bp CCTGAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTACAGCATCATCTTCTaGGGCGCTATGTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PEMKKRPRDPRHGHSRHLYSIIF*GAMCSP
Trigger: GGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTA...CAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp TGGCGCGACACGGCCCGGCGAGCTCGAAACCCCGCCGCCCGCAGATaGTGCGCCGCTCCCGGGCCCGCCCGCCCAGCCTCTGCCGCCACT +
Preference number: 5 (lower is better)
Translates to: WRDTARRARNPAARR*CAAPGPARPASAAT
Trigger: AGTGGCGGCAGAGGCTGGGCGGGCGGGCCCGGGAGCGGCGCAGCATCTGCGGGCGGCGGGGTTTCGAGCTCGCCGGGCCGTGTCGCGCCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392519.7
CDS GCA 90 bp GCCCAGGCGGGCCGTGCAGCGGCGGCGGCGGCGGCGGCACCGAGTTaGGCTGCGGGGGTGGCGGCTGCAGCTCCAGTGATAGCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: AQAGRAAAAAAAAPS*AAGVAAAAPVIAQA
Trigger: CGCCTGCGCTATCACTGGAGCTGCAGCCGCCACCCCCGCAGCGCAACTCGGTGCCGCCGCCGCCGCCGCCGCTGCACGGCCCGCCTGGGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp CCACGCCTGGCGGGACGAGGCCCTGCGGCGCTCAGCCAGCGGGCATaGCGCGACACGGCCCGGCGAGCTCGAAACCCCGCCGCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PRLAGRGPAALSQRA*RDTARRARNPAARR
Trigger: TCTGCGGGCGGCGGGGTTTCGAGCTCGCCGGGCCGTGTCGCGCCATGCCCGCTGGCTGAGCGCCGCAGGGCCTCGTCCCGCCAGGCGTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392519.7
CDS-3UTR CAA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGCGGAACAGCGCCATGTaGGCGGCGCGCGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LRPRPPKQTHALGRAGGARNSAM*AARAST
Trigger: CGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCCG...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp GGAACAGGCCGGGCACACACACAGACAGCAGCAGCGTCAGCGCCTTaGGCGCCACGGGGTCCGCCGCGCCGCGCCGCGCCGCCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: GTGRAHTQTAAASAP*APRGPPRRAAPPCS
Trigger: ACTACAAGGCGGCGCGGCGCGGCGCGGCGGACCCCGTGGCGCGCAAGGCGCTGACGCTGCTGCTGTCTGTGTGTGTGCCCGGCCTGTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp TGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGGAACAGCGCCATGTaGGCGGCGCGCGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: CSGPGLPNRPTRWGGLVERNSAM*AARAST
Trigger: CGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCCG...CTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCAGGAAGGTGCAGGCCTaGGTGGCGAGCGCCACCACG +
Preference number: 5 (lower is better)
Translates to: AAGPQARALEAPVPRGARRKVQA*VASATT
Trigger: CGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCT...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp ATGACGGCCATGCTGCCCATGATCACCAGCGTGGTCAGGCACACGTaGCGCCGGTCCGGGGGCGGCAGCACCATGGTCGGCCGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: MTAMLPMITSVVRHT*RRSGGGSTMVGRRA
Trigger: GGCCCGGCGGCCGACCATGGTGCTGCCGCCCCCGGACCGGCGCCACGTGTGCCTGACCACGCTGGTGATCATGGGCAGCATGGCCGTCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp CCTCGGCCCACAGCGGCAGCCCGGAGCGCGGCGGCTCCCACAGGCTaGCCTGCATGTCCAGCAGGTCCAGCAGGTCCAGCGCCACCCAAA +
Preference number: 5 (lower is better)
Translates to: PRPTAAARSAAAPTG*PACPAGPAGPAPPK
Trigger: TTTGGGTGGCGCTGGACCTGCTGGACCTGCTGGACATGCAGGCCAGCCTGTGGGAGCCGCCGCGCTCCGGGCTGCCGCTGTGGGCCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCATGCACACGCCGATCTaGCGCGGGCCCTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AAGPQARALEAPVPRGARMHTPI*RGPWFC
Trigger: GCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCAT...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp CTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCGCGCAGGTCCTCGCGCTaGCGGAAGGTGCGCACGTAC +
Preference number: 5 (lower is better)
Translates to: LRPRPPKQTHALGRAGGARRSSR*RKVRTY
Trigger: GTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCG...CGCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCCGCAGGTCCTCGCGCTaGCGGAAGGTGCGCACGTAC +
Preference number: 5 (lower is better)
Translates to: APAQASQTDPRAGAGWWSRRSSR*RKVRTY
Trigger: GTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCG...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGCAGGAAGGTGCAGGCCTaGGTGGCGAGCGCCACCACG +
Preference number: 5 (lower is better)
Translates to: APAQASQTDPRAGAGWWSRKVQA*VASATT
Trigger: CGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCT...GCTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp GCCCACAGCGGCAGCCCGGAGCGCGGCGGCTCCCACAGGCTGGCCTaGATGTCCAGCAGGTCCAGCAGGTCCAGCGCCACCCAAAACAGG +
Preference number: 5 (lower is better)
Translates to: AHSGSPERGGSHRLA*MSSRSSRSSATQNR
Trigger: CCTGTTTTGGGTGGCGCTGGACCTGCTGGACCTGCTGGACATGCAGGCCAGCCTGTGGGAGCCGCCGCGCTCCGGGCTGCCGCTGTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp GGCTGCAGCTCCAGTGATAGCGCAGGCGGCGGGAAGTCGCGCACCTaGCGGCGGTACTCCAGGAAGGTGCAGGCCTTGGTGGCGAGCGCC +
Preference number: 5 (lower is better)
Translates to: GCSSSDSAGGGKSRT*RRYSRKVQALVASA
Trigger: GGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCCGCCGCCTGCGCTATCACTGGAGCTGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp TGCTCCGGCCCAGGCCTCCCAAACAGACCCACGCGCTGGGGCGGGCTGGTGGAGAGCACGGCCACCACATaGACGGTGGCGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CSGPGLPNRPTRWGGLVESTATT*TVARLS
Trigger: GCTCAGCCTCGCCACCGTCAATGTGGTGGCCGTGCT...CTCCACCAGCCCGCCCCAGCGCGTGGGTCTGTTTGGGAGGCCTGGGCCGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAGGGGAGCCCGCAGCGCCACCACGTTTTaGCCGACGAAGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: AAGPQARALEAPVPRGARSATTF*PTKMAE
Trigger: CTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCT...GCGGGCTCCCCTAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp GGCCGCGCAGGTCCTCGCGCTTGCGGAAGGTGCGCACGTACTCCATaGGGTCCAGCGCCACGAGCAGCAGGAACAGGCCGGGCACACACA +
Preference number: 5 (lower is better)
Translates to: GRAGPRACGRCARTP*GPAPRAAGTGRAHT
Trigger: TGTGTGTGCCCGGCCTGTTCCTGCTGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp GGTCCAGCGCCACCCAAAACAGGCGGCCGCGCAGGTCCTCGCGCTTaGGGAAGGTGCGCACGTACTCCATGCGGTCCAGCGCCACGAGCA +
Preference number: 5 (lower is better)
Translates to: GPAPPKTGGRAGPRA*GRCARTPCGPAPRA
Trigger: TGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGGCGCTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp CCACCCAAAACAGGCGGCCGCGCAGGTCCTCGCGCTTGCGGAAGGTaGGCACGTACTCCATGCGGTCCAGCGCCACGAGCAGCAGGAACA +
Preference number: 5 (lower is better)
Translates to: PPKTGGRAGPRACGR*ARTPCGPAPRAAGT
Trigger: TGTTCCTGCTGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp CAGGCGGCGGGAAGTCGCGCACCTGGCGGCGGTACTCCAGGAAGGTaGAGGCCTTGGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGA +
Preference number: 5 (lower is better)
Translates to: QAAGSRAPGGGTPGR*RPWWRAPPRFCRRR
Trigger: TCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCCGCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp ATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCCTAATGCACACGCCGATCTaGCGCGGGCCCTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: MKKRPRDPRHGHSRHLSLMHTPI*RGPWFC
Trigger: GCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCAT...TAGGGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp GCGAGGCTGAGCACCGGGTACAGCATCATCTTCTGCGGCGCTATGTaGTCGCCCTGCATGCTGACCTCGCTGAGCGCCACGCACGGCAGC +
Preference number: 5 (lower is better)
Translates to: ARLSTGYSIIFCGAM*SPCMLTSLSATHGS
Trigger: GCTGCCGTGCGTGGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTACCCGGTGCTCAGCCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp TCGCCCACCAGCACGATGATGCACACGCCGATCTTGCGCGGGCCCTaGTTCTGCTCCACCAGGTACGCGTCCATGACGGCCATGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SPTSTMMHTPILRGP*FCSTRYASMTAMLP
Trigger: GGGCAGCATGGCCGTCATGGACGCGTACCTGGTGGAGCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCATCATCGTGCTGGTGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp TGCAGGCCTTGGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGATaGCCGAGACACGGCTGTCCCGGAACAGCGCCATGTTGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: CRPWWRAPPRFCRRR*PRHGCPGTAPCWRR
Trigger: GCGCCGCCAACATGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS-3UTR CAA 90 bp GAGATGAAGAAGCGGCCGCGGGACCCCAGGCACGGGCACTCGAGGCACCTGTCCAGCGCCACCACGTTTTaGCCGACGAAGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: EMKKRPRDPRHGHSRHLSSATTF*PTKMAE
Trigger: CTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCT...GGACAGGTGCCTCGAGTGCCCGTGCCTGGGGTCCCGCGGCCGCTTCTTCATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp AGATGTAAAGGAACCACAGGATCATGGCGTAGCCGCGCTTGGCCGTaGGCACCTCGGCGCCCACCCACACGGCCACGTAGCGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: RCKGTTGSWRSRAWP*APRRPPTRPRSAAP
Trigger: TGGTGCTGCGCTACGTGGCCGTGTGGGTGGGCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCCTTTACATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp AGCACCGGGTACAGCATCATCTTCTGCGGCGCTATGTGCTCGCCCTaGATGCTGACCTCGCTGAGCGCCACGCACGGCAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: STGYSIIFCGAMCSP*MLTSLSATHGSTSS
Trigger: GCTGCTGGTGCTGCCGTGCGTGGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTACCCGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp GCACGAAGATGTAAAGGAACCACAGGATCATGGCGTAGCCGCGCTTaGCCGTGCGCACCTCGGCGCCCACCCACACGGCCACGTAGCGCA +
Preference number: 5 (lower is better)
Translates to: ARRCKGTTGSWRSRA*PCAPRRPPTRPRSA
Trigger: TGCGCTACGTGGCCGTGTGGGTGGGCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCCTTTACATCTTCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp AGTCGCGCACCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTTGGTaGCGAGCGCCACCACGTTTTTGCCGACGAAGATGGCCGAGACAC +
Preference number: 5 (lower is better)
Translates to: SRAPGGGTPGRCRPW*RAPPRFCRRRWPRH
Trigger: GTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 90 bp GGAAGTCGCGCACCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTTaGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGATGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: GSRAPGGGTPGRCRP*WRAPPRFCRRRWPR
Trigger: TCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 90 bp ACTCCAGGAAGGTGCAGGCCTTGGTGGCGAGCGCCACCACGTTTTTaGCGACGAAGATGGCCGAGACACGGCTGTCCCGGAACAGCGCCA +
Preference number: 5 (lower is better)
Translates to: TPGRCRPWWRAPPRF*RRRWPRHGCPGTAP
Trigger: TGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS TCA 90 bp GGCGAGCTCGAAACCCGGTTTTCACGTCCACTGGATCTACACGTCTaGCCCAGGAAGCCCTCTCTGGGCCCATTCCAGGCCCACCTGGGC +
Preference number: 5 (lower is better)
Translates to: GELETRFSRPLDLHV*PRKPSLGPFQAHLG
Trigger: GCCCAGGTGGGCCTGGAATGGGCCCAGAGAGGGCTTCCTGGGTCAGACGTGTAGATCCAGTGGACGTGAAAACCGGGTTTCGAGCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS GCA 90 bp ACATTGACGGTGGCGAGGCTGAGCACCGGGTACAGCATCATCTTCTaGGGCGCTATGTGCTCGCCCTGCATGCTGACCTCGCTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: TLTVARLSTGYSIIF*GAMCSPCMLTSLSA
Trigger: GGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTACCCGGTGCTCAGCCTCGCCACCGTCAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 90 bp CGCCCAGGCGGGCCGTGCAGCGGCGGCGGCGGCGGCGGCACCGAGTaGCGCTGCGGGGGTGGCGGCTGCAGCTCCAGTGATAGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: RPGGPCSGGGGGGTE*RCGGGGCSSSDSAG
Trigger: GCCTGCGCTATCACTGGAGCTGCAGCCGCCACCCCCGCAGCGCAACTCGGTGCCGCCGCCGCCGCCGCCGCTGCACGGCCCGCCTGGGCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp CGGGCACACACACAGACAGCAGCAGCGTCAGCGCCTTaGGCGCCACGGGGTCCGCCGCGCCGCGCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: RAHTQTAAASAP*APRGPPRRAAP
Trigger: CGGCGCGGCGCGGCGCGGCGGACCCCGTGGCGCGCAAGGCGCTGACGCTGCTGCTGTCTGTGTGTGTGCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp GCGGGACGAGGCCCTGCGGCGCTCAGCCAGCGGGCATaGCGCGACACGGCCCGGCGAGCTCGAAACCCCGCC +
Preference number: 6 (lower is better)
Translates to: AGRGPAALSQRA*RDTARRARNPA
Trigger: GGCGGGGTTTCGAGCTCGCCGGGCCGTGTCGCGCCATGCCCGCTGGCTGAGCGCCGCAGGGCCTCGTCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp CACGTGTCCAGGGGGTCACGCGTGGGCGAGGACATGTaGGGGCGCCCAGGCGGGCCGTGCAGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: HVSRGSRVGEDM*GRPGGPCSGGG
Trigger: GCCGCCGCCGCTGCACGGCCCGCCTGGGCGCCCCCACATGTCCTCGCCCACGCGTGACCCCCTGGACACGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 72 bp CCGGGCACACACACAGACAGCAGCAGCGTCAGCGCCTaGCGCGCCACGGGGTCCGCCGCGCCGCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: PGTHTDSSSVSA*RATGSAAPRRA
Trigger: GGCGCGGCGCGGCGCGGCGGACCCCGTGGCGCGCAAGGCGCTGACGCTGCTGCTGTCTGTGTGTGTGCCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp GGAACCACAGGATCATGGCGTAGCCGCGCTTGGCCGTaGGCACCTCGGCGCCCACCCACACGGCCACGTAGC +
Preference number: 6 (lower is better)
Translates to: GTTGSWRSRAWP*APRRPPTRPRS
Trigger: GCTACGTGGCCGTGTGGGTGGGCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp ACAGGCGGCCGCGCAGGTCCTCGCGCTTGCGGAAGGTaGGCACGTACTCCATGCGGTCCAGCGCCACGAGCA +
Preference number: 6 (lower is better)
Translates to: TGGRAGPRACGR*ARTPCGPAPRA
Trigger: TGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp ATGCTGCCCATGATCACCAGCGTGGTCAGGCACACGTaGCGCCGGTCCGGGGGCGGCAGCACCATGGTCGGC +
Preference number: 6 (lower is better)
Translates to: MLPMITSVVRHT*RRSGGGSTMVG
Trigger: GCCGACCATGGTGCTGCCGCCCCCGGACCGGCGCCACGTGTGCCTGACCACGCTGGTGATCATGGGCAGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp AGTCACTTGGCAGATGCGGGCCGAGGGGCTCTGCGCTaGCGAAGGGACGGACTCCAGCCCCTAGCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SHLADAGRGALR*RRDGLQPLAEP
Trigger: GGGCTCCGCTAGGGGCTGGAGTCCGTCCCTTCGCCAGCGCAGAGCCCCTCGGCCCGCATCTGCCAAGTGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS CAA 90 bp AGGTCCAGCGCCACCCAAAACAGGCGGCCGCGCAGGTCCTCGCGCTaGCGGAAGGTGCGCACGTACTCCATGCGGTCCAGCGCCACGAGC +
Preference number: 6 (lower is better)
Translates to: RSSATQNRRPRRSSR*RKVRTYSMRSSATS
Trigger: GCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGGCGCTGGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 90 bp CCGACGAAGATGGCCGAGACACGGCTGTCCCGGAACAGCGCCATGTaGGCGGCGCGCGCCAGCACGGCCACCACATTGACGGTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: PTKMAETRLSRNSAM*AARASTATTLTVAR
Trigger: CCTCGCCACCGTCAATGTGGTGGCCGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp GGTCCTCGCGCTTGCGGAAGGTGCGCACGTACTCCATaGGGTCCAGCGCCACGAGCAGCAGGAACAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GPRACGRCARTP*GPAPRAAGTGR
Trigger: CCGGCCTGTTCCTGCTGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp CCACCCAAAACAGGCGGCCGCGCAGGTCCTCGCGCTTaGGGAAGGTGCGCACGTACTCCATGCGGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: PPKTGGRAGPRA*GRCARTPCGPA
Trigger: CGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 72 bp GCCACCCAAAACAGGCGGCCGCGCAGGTCCTCGCGCTaGCGGAAGGTGCGCACGTACTCCATGCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: ATQNRRPRRSSR*RKVRTYSMRSS
Trigger: GCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 72 bp GCCATGTTGGCGGCGCGCGCCAGCACGGCCACCACATaGACGGTGGCGAGGCTGAGCACCGGGTACAGCATC +
Preference number: 6 (lower is better)
Translates to: AMLAARASTATT*TVARLSTGYSI
Trigger: GATGCTGTACCCGGTGCTCAGCCTCGCCACCGTCAATGTGGTGGCCGTGCTGGCGCGCGCCGCCAACATGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 72 bp ATGGCCGAGACACGGCTGTCCCGGAACAGCGCCATGTaGGCGGCGCGCGCCAGCACGGCCACCACATTGACG +
Preference number: 6 (lower is better)
Translates to: MAETRLSRNSAM*AARASTATTLT
Trigger: CGTCAATGTGGTGGCCGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp TCCAGTGATAGCGCAGGCGGCGGGAAGTCGCGCACCTaGCGGCGGTACTCCAGGAAGGTGCAGGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SSDSAGGGKSRT*RRYSRKVQALV
Trigger: CACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCCGCCGCCTGCGCTATCACTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp CCGCCCCACTACGCTGTCGCTCGATCCTCAGTCACTTaGCAGATGCGGGCCGAGGGGCTCTGCGCTGGCGAA +
Preference number: 6 (lower is better)
Translates to: PPHYAVARSSVT*QMRAEGLCAGE
Trigger: TTCGCCAGCGCAGAGCCCCTCGGCCCGCATCTGCCAAGTGACTGAGGATCGAGCGACAGCGTAGTGGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS CAA 72 bp TCCGCCCCACTACGCTGTCGCTCGATCCTCAGTCACTaGGCAGATGCGGGCCGAGGGGCTCTGCGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: SAPLRCRSILSH*ADAGRGALRWR
Trigger: TCGCCAGCGCAGAGCCCCTCGGCCCGCATCTGCCAAGTGACTGAGGATCGAGCGACAGCGTAGTGGGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS CAA 90 bp CGGAACAGCGCCATGTTGGCGGCGCGCGCCAGCACGGCCACCACATaGACGGTGGCGAGGCTGAGCACCGGGTACAGCATCATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RNSAMLAARASTATT*TVARLSTGYSIIFC
Trigger: GCAGAAGATGATGCTGTACCCGGTGCTCAGCCTCGCCACCGTCAATGTGGTGGCCGTGCTGGCGCGCGCCGCCAACATGGCGCTGTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 90 bp GGGAAGTCGCGCACCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTaGGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGATGGCCGAG +
Preference number: 6 (lower is better)
Translates to: GKSRTWRRYSRKVQA*VASATTFLPTKMAE
Trigger: CTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp GGAAGTCGCGCACCTGGCGGCGGTACTCCAGGAAGGTaGAGGCCTTGGTGGCGAGCGCCACCACGTTTTTGC +
Preference number: 6 (lower is better)
Translates to: GSRAPGGGTPGR*RPWWRAPPRFC
Trigger: GCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp ACTACGCTGTCGCTCGATCCTCAGTCACTTGGCAGATaGGGGCCGAGGGGCTCTGCGCTGGCGAAGGGACGG +
Preference number: 6 (lower is better)
Translates to: TTLSLDPQSLGR*GPRGSALAKGR
Trigger: CCGTCCCTTCGCCAGCGCAGAGCCCCTCGGCCCGCATCTGCCAAGTGACTGAGGATCGAGCGACAGCGTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS CCA 72 bp TGTAAAGGAACCACAGGATCATGGCGTAGCCGCGCTTaGCCGTGCGCACCTCGGCGCCCACCCACACGGCCA +
Preference number: 6 (lower is better)
Translates to: CKGTTGSWRSRA*PCAPRRPPTRP
Trigger: TGGCCGTGTGGGTGGGCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCCTTTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp CAGCCGCAGCCTGAGAATTTCCTCCCTCTCCGCGCGTaGCGGGGCCAAATAAATAGCGGGGGAGCCACGGCG +
Preference number: 6 (lower is better)
Translates to: QPQPENFLPLRA*RGQINSGGATA
Trigger: CGCCGTGGCTCCCCCGCTATTTATTTGGCCCCGCCACGCGCGGAGAGGGAGGAAATTCTCAGGCTGCGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS CAA 72 bp CGCACCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTaGGTGGCGAGCGCCACCACGTTTTTGCCGACGAAG +
Preference number: 6 (lower is better)
Translates to: RTWRRYSRKVQA*VASATTFLPTK
Trigger: CTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp AGGTGCAGGCCTTGGTGGCGAGCGCCACCACGTTTTTaGCGACGAAGATGGCCGAGACACGGCTGTCCCGGA +
Preference number: 6 (lower is better)
Translates to: RCRPWWRAPPRF*RRRWPRHGCPG
Trigger: TCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp AGCACGATGATGCACACGCCGATCTTGCGCGGGCCCTaGTTCTGCTCCACCAGGTACGCGTCCATGACGGCC +
Preference number: 6 (lower is better)
Translates to: STMMHTPILRGP*FCSTRYASMTA
Trigger: GGCCGTCATGGACGCGTACCTGGTGGAGCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCATCATCGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp CCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTTGGTaGCGAGCGCCACCACGTTTTTGCCGACGAAGATGG +
Preference number: 6 (lower is better)
Translates to: PGGGTPGRCRPW*RAPPRFCRRRW
Trigger: CCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp GCACCTGGCGGCGGTACTCCAGGAAGGTGCAGGCCTTaGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGA +
Preference number: 6 (lower is better)
Translates to: APGGGTPGRCRP*WRAPPRFCRRR
Trigger: TCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 72 bp AAGGTGCAGGCCTTGGTGGCGAGCGCCACCACGTTTTaGCCGACGAAGATGGCCGAGACACGGCTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: KVQALVASATTF*PTKMAETRLSR
Trigger: CCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CAA 90 bp TACTCCAGGAAGGTGCAGGCCTTGGTGGCGAGCGCCACCACGTTTTaGCCGACGAAGATGGCCGAGACACGGCTGTCCCGGAACAGCGCC +
Preference number: 6 (lower is better)
Translates to: YSRKVQALVASATTF*PTKMAETRLSRNSA
Trigger: GGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCAAGGCCTGCACCTTCCTGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp TACAGCATCATCTTCTGCGGCGCTATGTGCTCGCCCTaGATGCTGACCTCGCTGAGCGCCACGCACGGCAGC +
Preference number: 6 (lower is better)
Translates to: YSIIFCGAMCSP*MLTSLSATHGS
Trigger: GCTGCCGTGCGTGGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp AGCACCGGGTACAGCATCATCTTCTGCGGCGCTATGTaGTCGCCCTGCATGCTGACCTCGCTGAGCGCCACG +
Preference number: 6 (lower is better)
Translates to: STGYSIIFCGAM*SPCMLTSLSAT
Trigger: CGTGGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTACCCGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS GCA 72 bp GTGGCGAGGCTGAGCACCGGGTACAGCATCATCTTCTaGGGCGCTATGTGCTCGCCCTGCATGCTGACCTCG +
Preference number: 6 (lower is better)
Translates to: VARLSTGYSIIF*GAMCSPCMLTS
Trigger: CGAGGTCAGCATGCAGGGCGAGCACATAGCGCCGCAGAAGATGATGCTGTACCCGGTGCTCAGCCTCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp TGGTGGCGAGCGCCACCACGTTTTTGCCGACGAAGATaGCCGAGACACGGCTGTCCCGGAACAGCGCCATGT +
Preference number: 6 (lower is better)
Translates to: WWRAPPRFCRRR*PRHGCPGTAPC
Trigger: ACATGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCTCGCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp TCTCCAGCACGAAGATGTAAAGGAACCACAGGATCATaGCGTAGCCGCGCTTGGCCGTGCGCACCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SPARRCKGTTGS*RSRAWPCAPRR
Trigger: GCGCCGAGGTGCGCACGGCCAAGCGCGGCTACGCCATGATCCTGTGGTTCCTTTACATCTTCGTGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392519.7
ENST00000431372.1
CDS CCA 72 bp GGCCCGGCGAGCTCGAAACCCGGTTTTCACGTCCACTaGATCTACACGTCTGACCCAGGAAGCCCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: GPASSKPGFHVH*IYTSDPGSPLW
Trigger: CCAGAGAGGGCTTCCTGGGTCAGACGTGTAGATCCAGTGGACGTGAAAACCGGGTTTCGAGCTCGCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552019.1
CDS TCA 72 bp GAAACCCGGTTTTCACGTCCACTGGATCTACACGTCTaGCCCAGGAAGCCCTCTCTGGGCCCATTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: ETRFSRPLDLHV*PRKPSLGPFQA
Trigger: GGCCTGGAATGGGCCCAGAGAGGGCTTCCTGGGTCAGACGTGTAGATCCAGTGGACGTGAAAACCGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552019.1