RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM108 (Homo sapiens)

Ensembl gene IDs: ENSG00000144868

Ensembl transcript IDs: ENST00000321871.11, ENST00000393130.7, ENST00000508711.5, ENST00000510183.1, ENST00000511388.1, ENST00000511555.5, ENST00000512137.5, ENST00000512662.5, ENST00000514529.5, ENST00000514894.5, ENST00000515826.1

Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTGGAAGCTaGGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: RGGSQPAGNKGSSGS*ELDGKSTGWCCEQV
Trigger: AACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 90 bp CACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTaGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGA +
Preference number: 1 (lower is better)
Translates to: HSTGRQPAGREQGEQ*KLRAGWQVHRLVLR
Trigger: TCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 90 bp GCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTGGAAGCTGAGAGCTaGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTG +
Preference number: 1 (lower is better)
Translates to: AASRPGTRGAVEAES*MASPPAGAASRFAV
Trigger: CACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCCCTTGTTCCCGGCCGGCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 90 bp CCAGCCGGCCGGGAACAAGGGGAGCAGTGGAAGCTGAGAGCTGGATaGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAA +
Preference number: 1 (lower is better)
Translates to: PAGREQGEQWKLRAG*QVHRLVLRAGLQCQ
Trigger: TTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCCCTTGTTCCCGGCCGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR TCA 90 bp CTGTGGCCTAAAGTGCTGGCCGCCTTGCCACAGGTCACAGGTATGTaGGTGGCAGAGCTGGGACAAGATCCCGGGTCCCCTGTCCCCTTC +
Preference number: 1 (lower is better)
Translates to: LWPKVLAALPQVTGM*VAELGQDPGSPVPF
Trigger: GAAGGGGACAGGGGACCCGGGATCTTGTCCCAGCTCTGCCACTCACATACCTGTGACCTGTGGCAAGGCGGCCAGCACTTTAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp CCAGAGCCTCTGGGGATGAGGAGAGCTGAAGCCAAGAGCCACATCTaGCATCCTGGTGGTGCCAACCATCTCTGTGCTGGGGAGTCGGGG +
Preference number: 1 (lower is better)
Translates to: PEPLGMRRAEAKSHI*HPGGANHLCAGESG
Trigger: CCCCGACTCCCCAGCACAGAGATGGTTGGCACCACCAGGATGTCAGATGTGGCTCTTGGCTTCAGCTCTCCTCATCCCCAGAGGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp CCGTCTTCCCCTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATaGGAAGGGAGGAAATGGGGTCACACCAAATCAAGAGGAACCAGA +
Preference number: 1 (lower is better)
Translates to: PSSPEAVQFPLQVCV*EGRKWGHTKSRGTR
Trigger: TCTGGTTCCTCTTGATTTGGTGTGACCCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAGGGGAAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR TCA 90 bp GATGTTCCCTTTTCCTTCTCTGTGCATGAGTCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAG +
Preference number: 1 (lower is better)
Translates to: DVPFSFSVHESAVFP*GGPVPFTGVRMRRE
Trigger: CTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGACTCATGCACAGAGAAGGAAAAGGGAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 90 bp CTAACAGCCCATGTTGTTAGAATGCCAGATGCAGAGATCCTGCCCTaGGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCT +
Preference number: 1 (lower is better)
Translates to: LTAHVVRMPDAEILP*GKAWESEQKVLLHA
Trigger: AGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCATTCTAACAACATGGGCTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp CTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTaGACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCAC +
Preference number: 1 (lower is better)
Translates to: LLPADSCLRLMQKPT*TDGLRWAPHSLTEH
Trigger: GTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 90 bp TGCCTTAGATTGATGCAAAAGCCCACCTGCACAGATGGCCTGAGGTaGGCTCCACACAGCTTGACTGAGCACAGTGTGACATGTGACCCT +
Preference number: 1 (lower is better)
Translates to: CLRLMQKPTCTDGLR*APHSLTEHSVTCDP
Trigger: AGGGTCACATGTCACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAATCTAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp TTAGCAGTGGAAGTAATGTTAGGGGAATATGGCCTTGGGATGCCTTaGTGTCCTCCATGGATTCCTGAGGGCTCCATGCTCCTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: LAVEVMLGEYGLGMP*CPPWIPEGSMLLPA
Trigger: GGCAGGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGACATCAAGGCATCCCAAGGCCATATTCCCCTAACATTACTTCCACTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 90 bp AGGCTGCCTGGGGAATTCTGTAGCTTTCTTTCCAGCTGCCAGCCTTaGTGGCCTCTCAACCTGGAAAGGTCTCTGTACAAGGTTAGGAGA +
Preference number: 1 (lower is better)
Translates to: RLPGEFCSFLSSCQP*WPLNLERSLYKVRR
Trigger: TCTCCTAACCTTGTACAGAGACCTTTCCAGGTTGAGAGGCCAGCAAGGCTGGCAGCTGGAAAGAAAGCTACAGAATTCCCCAGGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp GCCTTGGGATGCCTTGATGTCCTCCATGGATTCCTGAGGGCTCCATaGTCCTGCCTGCCATCCACAACTTGGATGGAATTAAACATGACA +
Preference number: 1 (lower is better)
Translates to: ALGCLDVLHGFLRAP*SCLPSTTWMELNMT
Trigger: TGTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGACATCAAGGCATCCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 90 bp CCCTTCTCTGGTGTCTCTGTTCTTCATTGTCACTACCTTTCACTCTaGTCCTGCAGCTGGCATGGTGAAACACCTGGAGGAGTTCTAGCT +
Preference number: 1 (lower is better)
Translates to: PFSGVSVLHCHYLSL*SCSWHGETPGGVLA
Trigger: AGCTAGAACTCCTCCAGGTGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAGGTAGTGACAATGAAGAACAGAGACACCAGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 90 bp CTGCCTGCCATCCACAACTTGGATGGAATTAAACATGACATCCAATaGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGAGGTGATG +
Preference number: 1 (lower is better)
Translates to: LPAIHNLDGIKHDIQ*CRHKAPGYSSSEVM
Trigger: CATCACCTCTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 90 bp TTAAGCTCTCTTGGGTTCCCAGGAATGTCACTGGGGAGTCATCCATaGCTTGTCAGATGTGTGACAGGAAGAAGAGGGGTCACTCCATTT +
Preference number: 1 (lower is better)
Translates to: LSSLGFPGMSLGSHP*LVRCVTGRRGVTPF
Trigger: AAATGGAGTGACCCCTCTTCTTCCTGTCACACATCTGACAAGCCATGGATGACTCCCCAGTGACATTCCTGGGAACCCAAGAGAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 90 bp GTCTCTGTTCTTCATTGTCACTACCTTTCACTCTGCTCCTGCAGCTaGCATGGTGAAACACCTGGAGGAGTTCTAGCTGGTGTGACAGAA +
Preference number: 1 (lower is better)
Translates to: VSVLHCHYLSLCSCS*HGETPGGVLAGVTE
Trigger: TTCTGTCACACCAGCTAGAACTCCTCCAGGTGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAGGTAGTGACAATGAAGAACAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp TCCCTTTCCCATTTAGTTGAAAAGCTTCAACTGCTCTGTTTCTCCTaGGGCAGTAGCCATCAAGACTCTGGAGGAGGTCATGGAGTCCCA +
Preference number: 1 (lower is better)
Translates to: SLSHLVEKLQLLCFS*GSSHQDSGGGHGVP
Trigger: TGGGACTCCATGACCTCCTCCAGAGTCTTGATGGCTACTGCCTCAGGAGAAACAGAGCAGTTGAAGCTTTTCAACTAAATGGGAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp TTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTaGTTATATTTCTCTCAGGGAGTTTCCAGTGCTTCTCAAACACCA +
Preference number: 1 (lower is better)
Translates to: FCSTLSSPHMFMLLA*LYFSQGVSSASQTP
Trigger: TGGTGTTTGAGAAGCACTGGAAACTCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp CCTGCCATCCACAACTTGGATGGAATTAAACATGACATCCAATGGTaGCGTCATAAGGCTCCAGGGTACTCATCCTCAGAGGTGATGAGA +
Preference number: 1 (lower is better)
Translates to: PAIHNLDGIKHDIQW*RHKAPGYSSSEVMR
Trigger: TCTCATCACCTCTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 90 bp ATTAAATGCAGTCATACATCTGCCAGCACTTCAAATTGTCCCTGGTaGACAGTAGGTGCTGAAACAAATCAGCCCCTTCCCCCAGCCTAC +
Preference number: 1 (lower is better)
Translates to: IKCSHTSASTSNCPW*TVGAETNQPLPPAY
Trigger: GTAGGCTGGGGGAAGGGGCTGATTTGTTTCAGCACCTACTGTGCACCAGGGACAATTTGAAGTGCTGGCAGATGTATGACTGCATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 90 bp AAGATTAAATGCAGTCATACATCTGCCAGCACTTCAAATTGTCCCTaGTGCACAGTAGGTGCTGAAACAAATCAGCCCCTTCCCCCAGCC +
Preference number: 1 (lower is better)
Translates to: KIKCSHTSASTSNCP*CTVGAETNQPLPPA
Trigger: GGCTGGGGGAAGGGGCTGATTTGTTTCAGCACCTACTGTGCACCAGGGACAATTTGAAGTGCTGGCAGATGTATGACTGCATTTAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp AGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATaGTCCTGGCCTGATTATATTTCTCTCAGGGAGTTTCCAGTGCTT +
Preference number: 1 (lower is better)
Translates to: RTESSAPRCLPLTCS*SWPDYISLREFPVL
Trigger: AAGCACTGGAAACTCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp GTGACAGAAGCCATAAAGAGGGAACCATCTGGGAAGTGGGAAAAGTaGTGTTTCCTCAGCTCCAGCTCAGTTTTGGTAGAGTTAGAGCTA +
Preference number: 1 (lower is better)
Translates to: VTEAIKREPSGKWEK*CFLSSSSVLVELEL
Trigger: TAGCTCTAACTCTACCAAAACTGAGCTGGAGCTGAGGAAACAGCACTTTTCCCACTTCCCAGATGGTTCCCTCTTTATGGCTTCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 90 bp GAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTaGCCTGATTATATTTCTCTCAGGGAGTTTCCAGTGCTTCTCAAA +
Preference number: 1 (lower is better)
Translates to: ESSAPRCLPLTCSCS*PDYISLREFPVLLK
Trigger: TTTGAGAAGCACTGGAAACTCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp GTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCCCAGGTaGTCAAGAATAGTTATTAAGAGAAGCAATCAATGCAACTGCTTT +
Preference number: 1 (lower is better)
Translates to: VSLLPHLTRVPGIPR*SRIVIKRSNQCNCF
Trigger: AAAGCAGTTGCATTGATTGCTTCTCTTAATAACTATTCTTGAGCACCTGGGGATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 90 bp AGTTACTTAACCTCTCTCAGCGTCAGCTTCCTTGGGAAGATTAAATaGAGTCATACATCTGCCAGCACTTCAAATTGTCCCTGGTGCACA +
Preference number: 1 (lower is better)
Translates to: SYLTSLSVSFLGKIK*SHTSASTSNCPWCT
Trigger: TGTGCACCAGGGACAATTTGAAGTGCTGGCAGATGTATGACTGCATTTAATCTTCCCAAGGAAGCTGACGCTGAGAGAGGTTAAGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp AAAGTACAAGTCAGACTTACAGGGTCTCTACTATATTCCCAGCACTaGCCCAGGCACTTTGAAGCTTATTTAGCCCACATGATAACTGCC +
Preference number: 1 (lower is better)
Translates to: KVQVRLTGSLLYSQH*PRHFEAYLAHMITA
Trigger: GGCAGTTATCATGTGGGCTAAATAAGCTTCAAAGTGCCTGGGTCAGTGCTGGGAATATAGTAGAGACCCTGTAAGTCTGACTTGTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp TCAGGGAGTTTCCAGTGCTTCTCAAACACCATTTCATTTACTTACTaGAAGCCAGCCTGGCTACAGAAAGACCTAGGTTCAAATTGTGAC +
Preference number: 1 (lower is better)
Translates to: SGSFQCFSNTISFTY*KPAWLQKDLGSNCD
Trigger: GTCACAATTTGAACCTAGGTCTTTCTGTAGCCAGGCTGGCTTTCAGTAAGTAAATGAAATGGTGTTTGAGAAGCACTGGAAACTCCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp GGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTaGACACCGGAGGGTATAGAGATGACATATGCAGAAGCGTTTTGT +
Preference number: 1 (lower is better)
Translates to: GLDDLQVDIHYPVLS*TPEGIEMTYAEAFC
Trigger: ACAAAACGCTTCTGCATATGTCATCTCTATACCCTCCGGTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp CAACATCCTCTACAAGAGAGATCTAGAAAGAAAAACTGTGTTATATaGCTATTGGGTGGCTCAAGGACAAAGCTCCACCTAGGGGTTAGA +
Preference number: 1 (lower is better)
Translates to: QHPLQERSRKKNCVI*LLGGSRTKLHLGVR
Trigger: TCTAACCCCTAGGTGGAGCTTTGTCCTTGAGCCACCCAATAGTCATATAACACAGTTTTTCTTTCTAGATCTCTCTTGTAGAGGATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 90 bp AAGCTAATAGTATTGATCTTGATCACCCAACTAATTACTGCAACTTaGGTCCAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTG +
Preference number: 1 (lower is better)
Translates to: KLIVLILITQLITAT*VQVLMIFKLISTIL
Trigger: CAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTGGACTCAAGTTGCAGTAATTAGTTGGGTGATCAAGATCAATACTATTAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 90 bp GTAATGAGAATTAAAGAGATCATGGATGCAAAATGCCAAACACAATaGCTGACACACAATGGATGCTTAATTAATGACAGTTCTCTTCTT +
Preference number: 1 (lower is better)
Translates to: VMRIKEIMDAKCQTQ*LTHNGCLINDSSLL
Trigger: AAGAAGAGAACTGTCATTAATTAAGCATCCATTGTGTGTCAGGCATTGTGTTTGGCATTTTGCATCCATGATCTCTTTAATTCTCATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CAA 90 bp GCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTaGGCCGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: ATSGSPLGVSEGLTL*AVLDTARGGSQPAG
Trigger: CCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTCCTCCATGGATTCCTaGGGGCTCCATGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQSSMDS*GLHAPA
Trigger: GGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGA...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGCCTGACCAGGGTTCCTaGGATCCCCAGGTGCTCAAG +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQPDQGS*DPQVLK
Trigger: CTTGAGCACCTGGGGATCCCAGGAACCCTGGTCAGG...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTTCCTGAGGGCTCCATaGTCCTGCCTGCCATCCACA +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQFLRAP*SCLPST
Trigger: TGTGGATGGCAGGCAGGAGCATGGAGCCCTCAGGAA...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGGGCCTTGGGATGCCTTaGTGTCCTCCATGGATTCCT +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQGLGMP*CPPWIP
Trigger: AGGAATCCATGGAGGACATCAAGGCATCCCAAGGCC...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGCTCCATGCTCCTGCCTaGCATCCACAACTTGGATGG +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQLHAPA*HPQLGW
Trigger: CCATCCAAGTTGTGGATGGCAGGCAGGAGCATGGAG...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGAGGGGAATATGGCCTTaGGATGCCTTGATGTCCTCC +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQRGIWP*DALMSS
Trigger: GGAGGACATCAAGGCATCCCAAGGCCATATTCCCCT...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGGGAGCAGTGGAAGCTaGGAGCTGGATGGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARGSSGS*ELDGKS
Trigger: GGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: REAATSGSPLGVSEGLTLSAVFP*GGPVPF
Trigger: AAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGA...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGAAGCTGAGAGCTGGATaGCAAGTCCACCGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARKLRAG*QVHRLV
Trigger: CACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTT...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGCTCCATGCTCCTGCCTaGCATCCACAACTTGGATGG +
Preference number: 2 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARLHAPA*HPQLGW
Trigger: CCATCCAAGTTGTGGATGGCAGGCAGGAGCATGGAG...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTCCTGAGGGCTCCATaGTCCTGCCTGCCATCCACA +
Preference number: 2 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGFLRAP*SCLPST
Trigger: TGTGGATGGCAGGCAGGAGCATGGAGCCCTCAGGAA...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCAGATGCAGAGATCCTaGCCTGCGGGAAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVQMQRS*PAGRPG
Trigger: CCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGACGAAAAATACGGAATaGCAAAGTGATGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQTKNTE*QSDACC
Trigger: ACAGCAGGCATCACTTTGCCATTCCGTATTTTTCGT...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGCAGGGCCCTGTAGGCTaGCTGGGGAATTCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLQGPVG*LGNSVA
Trigger: AGCTACAGAATTCCCCAGGCAGCCTACAGGGCCCTG...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACCTGACCAGGGTTCCTaGGATCCCCAGGTGCTCAAG +
Preference number: 2 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIPDQGS*DPQVLK
Trigger: CTTGAGCACCTGGGGATCCCAGGAACCCTGGTCAGG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCAACTGTGGCCTAAAGTaGTGGCCGCCTTGCCACAGG +
Preference number: 2 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGNCGLK*WPPCHR
Trigger: CCTGTGGCAAGGCGGCCAGCACTTTAGGCCACAGTT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CAA 90 bp CAAAAGCCCACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTaGACTGAGCACAGTGTGACATGTGACCCTGTCTGTTCATCCCTG +
Preference number: 2 (lower is better)
Translates to: QKPTCTDGLRWAPHS*TEHSVTCDPVCSSL
Trigger: CAGGGATGAACAGACAGGGTCACATGTCACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGATACCATGGCCTTTTaGGAAAACAAAGCTGAACCC +
Preference number: 2 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARDTMAF*ENKAEP
Trigger: GGGTTCAGCTTTGTTTTCTCAAAAGGCCATGGTATC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCTGCTCTGTTTCTCCTaGGGCAGTAGCCATCAAGAC +
Preference number: 2 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSLLCFS*GSSHQD
Trigger: GTCTTGATGGCTACTGCCTCAGGAGAAACAGAGCAG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCTGTGGTGCTCAGCCTaGAACTTGCTAATTCAGGCC +
Preference number: 2 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVLWCSA*NLLIQA
Trigger: GGCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGAATATGGCCTTGGGATaGCTTGATGTCCTCCATGGA +
Preference number: 2 (lower is better)
Translates to: REAATSGSPLGVSEGLTLNMALG*LDVLHG
Trigger: TCCATGGAGGACATCAAGGCATCCCAAGGCCATATT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CAA 90 bp GCACCTGGCCAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATaGATGCAAAAGCCCACCTGCACAGATGGCCTGAGGTGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: APGQSMLLPADSCLR*MQKPTCTDGLRWAP
Trigger: TGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTGGCCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTTCCTCCATGGATTCCTaGGGGCTCCATGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSSSMDS*GLHAPA
Trigger: GGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGA...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGATACCATGGCCTTTTaGGAAAACAAAGCTGAACCC +
Preference number: 2 (lower is better)
Translates to: REAATSGSPLGVSEGLTLDTMAF*ENKAEP
Trigger: GGGTTCAGCTTTGTTTTCTCAAAAGGCCATGGTATC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCCTGGGATCCCCAGGTaGTCAAGAATAGTTATTAAG +
Preference number: 2 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGPGIPR*SRIVIK
Trigger: CTTAATAACTATTCTTGAGCACCTGGGGATCCCAGG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGTCACTCAAAGAATCGTaGGCTTGCACTGTAACATTC +
Preference number: 2 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARSLKES*ACTVTF
Trigger: GAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGA...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGAAACATGACATCCAATaGTGCCGTCATAAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: REAATSGSPLGVSEGLTLKHDIQ*CRHKAP
Trigger: TGGAGCCTTATGACGGCACCATTGGATGTCATGTTT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAAGGGGAATATGGCCTTaGGATGCCTTGATGTCCTCC +
Preference number: 2 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIRGIWP*DALMSS
Trigger: GGAGGACATCAAGGCATCCCAAGGCCATATTCCCCT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGAATGTTAGGGGAATATaGCCTTGGGATGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: REAATSGSPLGVSEGLTLNVRGI*PWDALM
Trigger: CATCAAGGCATCCCAAGGCCATATTCCCCTAACATT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGTCTCTTACCTCACCTaGCCAGGGTTCCTGGGATCC +
Preference number: 2 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSVSYLT*PGFLGS
Trigger: GGATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGAC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTACCCCAATAAACATTTaGTCCTTGAAGAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGTPINI*SLKKEG
Trigger: CCCTTCCTTCTTCAAGGATCAAATGTTTATTGGGGT...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGTCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQSAVFP*GGPVPF
Trigger: AAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGA...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCCTAGGTTCAAATTGTaGCTCTGCCATGTATTCCAC +
Preference number: 2 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVPRFKL*LCHVFH
Trigger: GTGGAATACATGGCAGAGTCACAATTTGAACCTAGG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTGTGAGTGGCAGAGCTaGGACAAGATCCCGGGTCCC +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTCEWQS*DKIPGP
Trigger: GGGACCCGGGATCTTGTCCCAGCTCTGCCACTCACA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGGTCTCTTACCTCACCTaGCCAGGGTTCCTGGGATCC +
Preference number: 2 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQVSYLT*PGFLGS
Trigger: GGATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGAC...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGATTTCATTTACTTACTaGAAGCCAGCCTGGCTACAG +
Preference number: 2 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLISFTY*KPAWLQ
Trigger: CTGTAGCCAGGCTGGCTTTCAGTAAGTAAATGAAAT...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCAGAGCCTCTGGGGATaGGGAGAGCTGAAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTQSLWG*GELKPR
Trigger: TCTTGGCTTCAGCTCTCCTCATCCCCAGAGGCTCTG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACATGACATCCAATGGTaGCGTCATAAGGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRHDIQW*RHKAPG
Trigger: CCCTGGAGCCTTATGACGGCACCATTGGATGTCATG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGAAATGCCAAACACAATaGCTGACACACAATGGATGC +
Preference number: 2 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLKCQTQ*LTHNGC
Trigger: GCATCCATTGTGTGTCAGGCATTGTGTTTGGCATTT...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGATGCAGTCATACATCTaGCAGCACTTCAAATTGTCC +
Preference number: 2 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVMQSYI*QHFKLS
Trigger: GGACAATTTGAAGTGCTGGCAGATGTATGACTGCAT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCACTCCATTTTCAGATaGAGCCCTGAGTACTGTATT +
Preference number: 2 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSHSIFR*SPEYCI
Trigger: AATACAGTACTCAGGGCTCCATCTGAAAATGGAGTG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTATATGACTATTGGGTaGCTCAAGGACAAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKYMTIG*LKDKAP
Trigger: TGGAGCTTTGTCCTTGAGCCACCCAATAGTCATATA...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCACTTCAAATTGTCCCTaGTGCACAGTAGGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGTSNCP*CTVGAE
Trigger: TTCAGCACCTACTGTGCACCAGGGACAATTTGAAGT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATTACAGGTGTGCGTATaGGAAGGGAGGAAATGGGGT +
Preference number: 2 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRLQVCV*EGRKWG
Trigger: ACCCCATTTCCTCCCTTCTCATACGCACACCTGTAA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCTTTCAGATGGAGCCCTaGGTACTGTATTCACATTTG +
Preference number: 2 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGFQMEP*VLYSHL
Trigger: CAAATGTGAATACAGTACTCAGGGCTCCATCTGAAA...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGAACTGCGCAGCTCTATaGAAACACAAGATGTTAACT +
Preference number: 2 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKNCAAL*KHKMLT
Trigger: AGTTAACATCTTGTGTTTGCATAGAGCTGCGCAGTT...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAAAGAATCGTGCGCTTaGACTGTAACATTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGKESCA*TVTFSF
Trigger: GAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCCTCTGGAGGAGGTCATaGAGTCCCAATTTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLLWRRS*SPNFLE
Trigger: CTCAAGGAAATTGGGACTCCATGACCTCCTCCAGAG...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCATTCACTATTTCAGTaGTCTCACCTTTCATCCAAG +
Preference number: 2 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGHSLFQ*SHLSSK
Trigger: CTTGGATGAAAGGTGAGACCACTGAAATAGTGAATG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CAA 90 bp ATGGGCATAAAGGGAGCATTTTCCCACCAGGGAAAGGCAGTCCTGTaGTTAGCAGTGGAAGTAATGTTAGGGGAATATGGCCTTGGGATG +
Preference number: 2 (lower is better)
Translates to: MGIKGAFSHQGKAVL*LAVEVMLGEYGLGM
Trigger: CATCCCAAGGCCATATTCCCCTAACATTACTTCCACTGCTAACAACAGGACTGCCTTTCCCTGGTGGGAAAATGCTCCCTTTATGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR TCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCTATCCTGTATTGTCCTaGACACCGGAGGGTATAGAG +
Preference number: 2 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLYPVLS*TPEGIE
Trigger: CTCTATACCCTCCGGTGTTCAGGACAATACAGGATA...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTATATTCCCAGCACTaGCCCAGGCACTTTGAAGCT +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLYSQH*PRHFEA
Trigger: AGCTTCAAAGTGCCTGGGTCAGTGCTGGGAATATAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCTGGGATCCCCAGGTaGTCAAGAATAGTTATTAAG +
Preference number: 2 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSPGIPR*SRIVIK
Trigger: CTTAATAACTATTCTTGAGCACCTGGGGATCCCAGG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTTTCACTCTGCTCCTaGAGCTGGCATGGTGAAACA +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLSLCS*SWHGET
Trigger: TGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGAATTAAAGAGATCATaGATGCAAAATGCCAAACAC +
Preference number: 2 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSELKRS*MQNAKH
Trigger: GTGTTTGGCATTTTGCATCCATGATCTCTTTAATTC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAAAAGAATCGTGCGCTTaGACTGTAACATTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRKESCA*TVTFSF
Trigger: GAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTACGAAAAATACGGAATaGCAAAGTGATGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSTKNTE*QSDACC
Trigger: ACAGCAGGCATCACTTTGCCATTCCGTATTTTTCGT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGAACCATCTGGGAAGTaGGAAAAGTGCTGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTEPSGK*EKCCFL
Trigger: GAGGAAACAGCACTTTTCCCACTTCCCAGATGGTTC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTAAGCGTTTTGTAAACTaGGCAGCTCTATGCAAACAC +
Preference number: 2 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPKRFVN*AALCKH
Trigger: GTGTTTGCATAGAGCTGCGCAGTTTACAAAACGCTT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGCAGAGATCCTGCCCTaGGGGAAGGCCTGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSAEILP*GKAWES
Trigger: TGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCAAAAACTGTGTTATATaGCTATTGGGTGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLKNCVI*LLGGSR
Trigger: CCTTGAGCCACCCAATAGTCATATAACACAGTTTTT...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTTGATTAACCATGTGTaGATTGAGTGGCTTGTGAGC +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLINHV*IEWLVS
Trigger: GCTCACAAGCCACTCAATTCACACATGGTTAATCAA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTTGAAAAGCTTCAACTaGTCTGTTTCTCCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLKSFN*SVSPEA
Trigger: TGCCTCAGGAGAAACAGAGCAGTTGAAGCTTTTCAA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCATCATGGATGCAAAATaGCAAACACAATGCCTGACA +
Preference number: 2 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLIMDAK*QTQCLT
Trigger: TGTCAGGCATTGTGTTTGGCATTTTGCATCCATGAT...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACTCCCAGGAATGTCACTaGGGAGTCATCCATGGCTTG +
Preference number: 2 (lower is better)
Translates to: QVLMIFKLISTILYCPEHSQECH*GVIHGL
Trigger: CAAGCCATGGATGACTCCCCAGTGACATTCCTGGGA...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CAA 90 bp TCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTaGCACTGTAACATTCAGCTTCTACAGGAGGTCAGTCTCTTACCT +
Preference number: 2 (lower is better)
Translates to: SRGTRALRITQRIVR*HCNIQLLQEVSLLP
Trigger: AGGTAAGAGACTGACCTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCTGGGGAGTCATCCATaGCTTGTCAGATGTGTGACA +
Preference number: 2 (lower is better)
Translates to: QVLMIFKLISTILYCPEHLGSHP*LVRCVT
Trigger: TGTCACACATCTGACAAGCCATGGATGACTCCCCAG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCCCTGCGGGAAGGCCTaGGAGTCAGAACAGAAAGTT +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSPCGKA*ESEQKV
Trigger: AACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTGACACACAATGGATaGTTAATTAATGACAGTTCT +
Preference number: 2 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLTHNG*LINDSS
Trigger: AGAACTGTCATTAATTAAGCATCCATTGTGTGTCAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCCTTTCCCATTTAGTTaGAAAGCTTCAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: QVLMIFKLISTILYCPEHPFPFS*KASTAL
Trigger: CAGAGCAGTTGAAGCTTTTCAACTAAATGGGAAAGG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCAGAACAGAAAGTTCTaGTCCACGCTGTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSQNRKF*STLSSP
Trigger: AGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCTAGAAGGTGGGGCATaGAAACCTAGAGAGGTGAAC +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSLEGGA*KPREVN
Trigger: GTTCACCTCTCTAGGTTTCCATGCCCCACCTTCTAG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCCCTGTCCCCTTCTCTaGTGTCTCTGTTCTTCATTG +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSPCPLL*CLCSSL
Trigger: CAATGAAGAACAGAGACACCAGAGAAGGGGACAGGG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR TCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTTCATGCTCCTGGCCTaGTTATATTTCTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSFMLLA*LYFSQG
Trigger: TCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGGAATTAAGCTCTCTTaGGTTCCCAGGAATGTCACT +
Preference number: 2 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSGIKLS*VPRNVT
Trigger: AGTGACATTCCTGGGAACCCAAGAGAGCTTAATTCC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp CCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTaGCGTTGTTGGCCGTGCTGGACACAGCACGGGGAG +
Preference number: 3 (lower is better)
Translates to: PPLEAPWASLRV*RCWPCWTQHGE
Trigger: CTCCCCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR TCA 72 bp AGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTaGGGGTCTGACGTTGTTGGCCGTGCTGGACACAGC +
Preference number: 3 (lower is better)
Translates to: RSGHLWKPLGRL*GSDVVGRAGHS
Trigger: GCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 72 bp TGCTGGCCGCCTTGCCACAGGTCACAGGTATGTGAGTaGCAGAGCTGGGACAAGATCCCGGGTCCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: CWPPCHRSQVCE*QSWDKIPGPLS
Trigger: GGACAGGGGACCCGGGATCTTGTCCCAGCTCTGCCACTCACATACCTGTGACCTGTGGCAAGGCGGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CAA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGTGGCCTTGGGATGCCTaGATGTCCTCCATGGATTCC +
Preference number: 3 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARWPWDA*MSSMDS
Trigger: GGAATCCATGGAGGACATCAAGGCATCCCAAGGCCA...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR TCA 72 bp AAAGTGCTGGCCGCCTTGCCACAGGTCACAGGTATGTaGGTGGCAGAGCTGGGACAAGATCCCGGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: KVLAALPQVTGM*VAELGQDPGSP
Trigger: AGGGGACCCGGGATCTTGTCCCAGCTCTGCCACTCACATACCTGTGACCTGTGGCAAGGCGGCCAGCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp TCTGGCCAGCATCAGGGGTGGGTTCATGCCAGGGTGTaGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTG +
Preference number: 3 (lower is better)
Translates to: SGQHQGWVHARV*GSCTSWHLYRL
Trigger: CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCACCCCTGATGCTGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTaGCACCTGTATAGGCTGAGACCTCACAGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: WVHARVWGSCTS*HLYRLRPHSPE
Trigger: CTCTGGGCTGTGAGGTCTCAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CAA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGGCCAGCACCGGGGGTaGGCAGAGGGCCAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTGQHRG*AEGQLC
Trigger: ACAGAGCTGGCCCTCTGCCAACCCCCGGTGCTGGCC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp CTGGGGATGAGGAGAGCTGAAGCCAAGAGCCACATCTaGCATCCTGGTGGTGCCAACCATCTCTGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: LGMRRAEAKSHI*HPGGANHLCAG
Trigger: CCCAGCACAGAGATGGTTGGCACCACCAGGATGTCAGATGTGGCTCTTGGCTTCAGCTCTCCTCATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTaGTCCACGCTGTCTTCCCCTCACATGTTCATGCTC +
Preference number: 3 (lower is better)
Translates to: PAGRPGSQNRKF*STLSSPHMFML
Trigger: GAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp GCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTaGACAGATGGCCTGAGGTGGGCTCCACACAGCTTG +
Preference number: 3 (lower is better)
Translates to: ADSCLRLMQKPT*TDGLRWAPHSL
Trigger: CAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp AGAGAGGTGAACTTGCTCAAGGCCATGCTGCTAACCTaGGCTGGTAGAGGTTGCAGAATCCAAGTCCTCCGC +
Preference number: 3 (lower is better)
Translates to: REVNLLKAMLLT*AGRGCRIQVLR
Trigger: GCGGAGGACTTGGATTCTGCAACCTCTACCAGCCCAGGTTAGCAGCATGGCCTTGAGCAAGTTCACCTCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp TTGATGCAAAAGCCCACCTGCACAGATGGCCTGAGGTaGGCTCCACACAGCTTGACTGAGCACAGTGTGACA +
Preference number: 3 (lower is better)
Translates to: LMQKPTCTDGLR*APHSLTEHSVT
Trigger: TGTCACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp TTTTCCTTCTCTGTGCATGAGTCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATG +
Preference number: 3 (lower is better)
Translates to: FSFSVHESAVFP*GGPVPFTGVRM
Trigger: CATACGCACACCTGTAAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGACTCATGCACAGAGAAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 72 bp CTTGGGTTCCCAGGAATGTCACTGGGGAGTCATCCATaGCTTGTCAGATGTGTGACAGGAAGAAGAGGGGTC +
Preference number: 3 (lower is better)
Translates to: LGFPGMSLGSHP*LVRCVTGRRGV
Trigger: GACCCCTCTTCTTCCTGTCACACATCTGACAAGCCATGGATGACTCCCCAGTGACATTCCTGGGAACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp GCTGGGACAAGATCCCGGGTCCCCTGTCCCCTTCTCTaGTGTCTCTGTTCTTCATTGTCACTACCTTTCACT +
Preference number: 3 (lower is better)
Translates to: AGTRSRVPCPLL*CLCSSLSLPFT
Trigger: AGTGAAAGGTAGTGACAATGAAGAACAGAGACACCAGAGAAGGGGACAGGGGACCCGGGATCTTGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp CCTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATaGGAAGGGAGGAAATGGGGTCACACCAAATCAAGA +
Preference number: 3 (lower is better)
Translates to: PEAVQFPLQVCV*EGRKWGHTKSR
Trigger: TCTTGATTTGGTGTGACCCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 72 bp TGCCTTGATGTCCTCCATGGATTCCTGAGGGCTCCATaGTCCTGCCTGCCATCCACAACTTGGATGGAATTA +
Preference number: 3 (lower is better)
Translates to: CLDVLHGFLRAP*SCLPSTTWMEL
Trigger: TAATTCCATCCAAGTTGTGGATGGCAGGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGACATCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 72 bp CATGTTGTTAGAATGCCAGATGCAGAGATCCTGCCCTaGGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTG +
Preference number: 3 (lower is better)
Translates to: HVVRMPDAEILP*GKAWESEQKVL
Trigger: CAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCATTCTAACAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp AATTCAGGCCGCCTCCTTATTCTAGAGGAAAAACTGTaGCCTAAAGTGCTGGCCGCCTTGCCACAGGTCACA +
Preference number: 3 (lower is better)
Translates to: NSGRLLILEEKL*PKVLAALPQVT
Trigger: TGTGACCTGTGGCAAGGCGGCCAGCACTTTAGGCCACAGTTTTTCCTCTAGAATAAGGAGGCGGCCTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CAA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCTGAGGAAGGCACTATaGCTCTTCCCATTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGLRKAL*LFPFSE
Trigger: TTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CAA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTGGGCTCCACACAGCTaGACTGAGCACAGTGTGACA +
Preference number: 3 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTWAPHS*TEHSVT
Trigger: TGTCACACTGTGCTCAGTCAAGCTGTGTGGAGCCCA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GAAGTAATGTTAGGGGAATATGGCCTTGGGATGCCTTaGTGTCCTCCATGGATTCCTGAGGGCTCCATGCTC +
Preference number: 3 (lower is better)
Translates to: EVMLGEYGLGMP*CPPWIPEGSML
Trigger: GAGCATGGAGCCCTCAGGAATCCATGGAGGACATCAAGGCATCCCAAGGCCATATTCCCCTAACATTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 72 bp CCCCCAGCCTACATTCTTATTCTAGAAGGTGGGGCATaGAAACCTAGAGAGGTGAACTTGCTCAAGGCCATG +
Preference number: 3 (lower is better)
Translates to: PPAYILILEGGA*KPREVNLLKAM
Trigger: CATGGCCTTGAGCAAGTTCACCTCTCTAGGTTTCCATGCCCCACCTTCTAGAATAAGAATGTAGGCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp CTTCATTGTCACTACCTTTCACTCTGCTCCTGCAGCTaGCATGGTGAAACACCTGGAGGAGTTCTAGCTGGT +
Preference number: 3 (lower is better)
Translates to: LHCHYLSLCSCS*HGETPGGVLAG
Trigger: ACCAGCTAGAACTCCTCCAGGTGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAGGTAGTGACAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp AGTCATACATCTGCCAGCACTTCAAATTGTCCCTGGTaGACAGTAGGTGCTGAAACAAATCAGCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SHTSASTSNCPW*TVGAETNQPLP
Trigger: GGGAAGGGGCTGATTTGTTTCAGCACCTACTGTGCACCAGGGACAATTTGAAGTGCTGGCAGATGTATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCAAAGAATCGTGCGCTaGCACTGTAACATTCAGCTT +
Preference number: 3 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSQRIVR*HCNIQL
Trigger: AAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CAA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACCTGCCATCCACAACTaGGATGGAATTAAACATGAC +
Preference number: 3 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRPAIHN*DGIKHD
Trigger: GTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR GCA 72 bp AGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATaGTCCTGGCCTGATTATATTTCTCTCAGGGAGTTT +
Preference number: 3 (lower is better)
Translates to: SSAPRCLPLTCS*SWPDYISLREF
Trigger: AAACTCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp TCTGTTCTTCATTGTCACTACCTTTCACTCTGCTCCTaGAGCTGGCATGGTGAAACACCTGGAGGAGTTCTA +
Preference number: 3 (lower is better)
Translates to: SVLHCHYLSLCS*SWHGETPGGVL
Trigger: TAGAACTCCTCCAGGTGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAGGTAGTGACAATGAAGAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR CCA 72 bp CCTGTTGTTAGCAGTGGAAGTAATGTTAGGGGAATATaGCCTTGGGATGCCTTGATGTCCTCCATGGATTCC +
Preference number: 3 (lower is better)
Translates to: PVVSSGSNVRGI*PWDALMSSMDS
Trigger: GGAATCCATGGAGGACATCAAGGCATCCCAAGGCCATATTCCCCTAACATTACTTCCACTGCTAACAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 72 bp TGCAGTCATACATCTGCCAGCACTTCAAATTGTCCCTaGTGCACAGTAGGTGCTGAAACAAATCAGCCCCTT +
Preference number: 3 (lower is better)
Translates to: CSHTSASTSNCP*CTVGAETNQPL
Trigger: AAGGGGCTGATTTGTTTCAGCACCTACTGTGCACCAGGGACAATTTGAAGTGCTGGCAGATGTATGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GAAGAAGAGGGGTCACTCCATTTTCAGATGGAGCCCTaGGTACTGTATTCACATTTGTGGAAGGGCATGCTT +
Preference number: 3 (lower is better)
Translates to: EEEGSLHFQMEP*VLYSHLWKGML
Trigger: AAGCATGCCCTTCCACAAATGTGAATACAGTACTCAGGGCTCCATCTGAAAATGGAGTGACCCCTCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GTCTCTACTATATTCCCAGCACTGACCCAGGCACTTTaGAGCTTATTTAGCCCACATGATAACTGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: VSTIFPALTQAL*SLFSPHDNCLR
Trigger: CCTCAGGCAGTTATCATGTGGGCTAAATAAGCTTCAAAGTGCCTGGGTCAGTGCTGGGAATATAGTAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GTCAGACTTACAGGGTCTCTACTATATTCCCAGCACTaGCCCAGGCACTTTGAAGCTTATTTAGCCCACATG +
Preference number: 3 (lower is better)
Translates to: VRLTGSLLYSQH*PRHFEAYLAHM
Trigger: CATGTGGGCTAAATAAGCTTCAAAGTGCCTGGGTCAGTGCTGGGAATATAGTAGAGACCCTGTAAGTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp CACAACTTGGATGGAATTAAACATGACATCCAATGGTaGCGTCATAAGGCTCCAGGGTACTCATCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: HNLDGIKHDIQW*RHKAPGYSSSE
Trigger: CTCTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAATTCCATCCAAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CCA 72 bp ATCCACAACTTGGATGGAATTAAACATGACATCCAATaGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: IHNLDGIKHDIQ*CRHKAPGYSSS
Trigger: TGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAATTCCATCCAAGTTGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR-3UTR CAA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGGGAGTCCCAATTTCCTaGAGTTTTAAAACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQGVPIS*SFKTEL
Trigger: CAACTCTGTTTTAAAACTCAAGGAAATTGGGACTCC...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp CACTTTGAAGCTTATTTAGCCCACATGATAACTGCCTaGGGAAGGCACTATTGCTCTTCCCATTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: HFEAYLAHMITA*GRHYCSSHFQN
Trigger: GTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGGGCTAAATAAGCTTCAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTaGACACCGGAGGGTATAGAGATGACATATGCAGAA +
Preference number: 3 (lower is better)
Translates to: DLQVDIHYPVLS*TPEGIEMTYAE
Trigger: TTCTGCATATGTCATCTCTATACCCTCCGGTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR TCA 72 bp GTATTGATCTTGATCACCCAACTAATTACTGCAACTTaGGTCCAGGTCTTGATGATCTTCAAGTTGATATCC +
Preference number: 3 (lower is better)
Translates to: VLILITQLITAT*VQVLMIFKLIS
Trigger: GGATATCAACTTGAAGATCATCAAGACCTGGACTCAAGTTGCAGTAATTAGTTGGGTGATCAAGATCAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
3UTR GCA 72 bp GCTAATAGTATTGATCTTGATCACCCAACTAATTACTaGAACTTGAGTCCAGGTCTTGATGATCTTCAAGTT +
Preference number: 3 (lower is better)
Translates to: ANSIDLDHPTNY*NLSPGLDDLQV
Trigger: AACTTGAAGATCATCAAGACCTGGACTCAAGTTGCAGTAATTAGTTGGGTGATCAAGATCAATACTATTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGCCCAGGGGCCGCTTCTaGCCCAGAGGTGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQPRGRF*PRGVEL
Trigger: AAGCTCCACACCTCTGGGGCAGAAGCGGCCCCTGGG...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGGGTTGCCATGGCTGCTaGAGCGGGCCCTGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQGCHGC*SGPCGQ
Trigger: CTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACC...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGCTGGGGCCATCCTGTaGGTCACCGTGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGAGAIL*VTVVGA
Trigger: CGCCCCCACCACGGTGACCCACAGGATGGCCCCAGC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGAAGCTGAGAGCTGGATaGCAAGTCCACCGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQKLRAG*QVHRLV
Trigger: CACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTT...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CAA 72 bp GGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTaGGCCGTGCTGGACACAGCACGGGGAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSPLGVSEGLTL*AVLDTARGGSQ
Trigger: CTGGCTGCCTCCCCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGTGTGCGTAGGAGGGTaGCCCTCTGCACGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARVCVGG*PSARGV
Trigger: GACACCCCGTGCAGAGGGGCACCCTCCTACGCACAC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGGGCAGCTTGTGGACTaGCAGGGGCACCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLGQLVD*QGHLRL
Trigger: CAGCCTCAGGTGCCCCTGTCAGTCCACAAGCTGCCC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGAGGAGGGTGCCCCTCTaGACGGGGTGTCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLRRVPL*TGCRCC
Trigger: GCAACACCGACACCCCGTGCAGAGGGGCACCCTCCT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGCTGTGGTGGGGCGGCTaGTGGCCCCCGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLLWWGG*WPPVAL
Trigger: CAAAGCCACCGGGGGCCACCAGCCGCCCCACCACAG...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGCTGGGGCCATCCTGTaGGTCACCGTGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKAGAIL*VTVVGA
Trigger: CGCCCCCACCACGGTGACCCACAGGATGGCCCCAGC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCGGGGACCAGGCGGTTaGGGAAATTGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGRGPGG*GNCLWL
Trigger: CAGCCACAGGCAATTTCCTCAACCGCCTGGTCCCCG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTGTGGTTGCCATGGCTaGTGGAGCGGGCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLCGCHG*WSGPCG
Trigger: TCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACA...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTCCACCGGCTGGTGCTaGGAGCAGGTTTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGSTGWC*EQVCSA
Trigger: GGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGA...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGCTGTGGAGAGAGGACTaGGCACCCGGTCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLLWRED*APGRSW
Trigger: CCATGACCGACCGGGTGCCCAGTCCTCTCTCCACAG...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGGGACTGGATCTCCCTaGGCAGCTCCACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGGTGSP*AAPQHA
Trigger: GGCATGCTGTGGAGCTGCCCAGGGAGATCCAGTCCC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGGCAAGTCCACCGGCTaGTGCTGCGAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLGKSTG*CCEQVC
Trigger: GCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGCC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGGGCAGCTTGTGGACTaGCAGGGGCACCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKGQLVD*QGHLRL
Trigger: CAGCCTCAGGTGCCCCTGTCAGTCCACAAGCTGCCC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGSAVFP*GGPVPF
Trigger: AAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGA...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCATGGTGGGGGCAGCCTaGCCTCGAGGGCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIMVGAA*PRGRPS
Trigger: AGAGGGCCGCCCTCGAGGGCAGGCTGCCCCCACCAT...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCCAGGGGCCGCTTCTaGCCCAGAGGTGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSPRGRF*PRGVEL
Trigger: AAGCTCCACACCTCTGGGGCAGAAGCGGCCCCTGGG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGTGCCCATGAGGTATTaGTGGGCACTGTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARVPMRY*WALWSQ
Trigger: CTGCGACCACAGTGCCCAGCAATACCTCATGGGCAC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGGTCTCATCTGCTCCTaGCTCTGCATGGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARGLICS*LCMACL
Trigger: GAGGCAAGCCATGCAGAGGCAGGAGCAGATGAGACC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGGTTGCCATGGCTGCTaGAGCGGGCCCTGTGGACAG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKGCHGC*SGPCGQ
Trigger: CTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCCCGGTCGGTCATGGTaGGGGTGGCCACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGPGRSW*GWPQSP
Trigger: AGGAGACTGTGGCCACCCTCACCATGACCGACCGGG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCGGGGACCAGGCGGTTaGGGAAATTGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSRGPGG*GNCLWL
Trigger: CAGCCACAGGCAATTTCCTCAACCGCCTGGTCCCCG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGGATACCATGGCCTTTTaGGAAAACAAAGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQDTMAF*ENKAEP
Trigger: GGGTTCAGCTTTGTTTTCTCAAAAGGCCATGGTATC...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCCTGCACAGATGGCCTaGGGTGGGCTCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVPAQMA*GGLHTA
Trigger: AGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCTGTGGTTGCCATGGCTaGTGGAGCGGGCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSCGCHG*WSGPCG
Trigger: TCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACA...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTAAGTCCACCGGCTGGTaGTGCGAGCAGGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGKSTGW*CEQVCS
Trigger: ACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTT...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGGCAGAGATCCTGCCCTaGGGGAAGGCCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVAEILP*GKAWES
Trigger: TGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGC...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGAGGATGTGGTTGCCATaGCTGCTGGAGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKRMWLP*LLERAL
Trigger: CAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCT...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGGCGGCCCTCTGGCTTaGAGGATGTGGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSGGPLA*RMWLPW
Trigger: CCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGCTGGTGGCCCCCGGTaGCTTTGTCAGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSAGGPR*LCQQDG
Trigger: ACCATCCTGCTGACAAAGCCACCGGGGGCCACCAGC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGGAGTAGCCCCAGAGTaGGGTCCTGGGGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIGVAPE*GPGGEG
Trigger: ACCCTCACCCCCAGGACCCCACTCTGGGGCTACTCC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGGAGTAGCCCCAGAGTaGGGTCCTGGGGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGGVAPE*GPGGEG
Trigger: ACCCTCACCCCCAGGACCCCACTCTGGGGCTACTCC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGTGCTCAGGCAGATGGTaGCTCTGTGCTGCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARCSGRW*LCAAVC
Trigger: ACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCA...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGTGGAAGCTGAGAGCTaGATGGCAAGTCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGVEAES*MASPPA
Trigger: AGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCAC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCAACCATCTCTGTGCTaGGGAGTCGGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKQPSLC*GVGVPG
Trigger: GCCTGGGACCCCGACTCCCCAGCACAGAGATGGTTG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGCCCACCTGCACAGATaGCCTGAGGTGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSAHLHR*PEVGST
Trigger: TGTGGAGCCCACCTCAGGCCATCTGTGCAGGTGGGC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGCACTTACATCCTCATaGCCCATCGGCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGALTSS*PIGSAA
Trigger: AGCAGCAGAGCCGATGGGTCATGAGGATGTAAGTGC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGGTTGTGGATGCTCCCTaGGGAATCCCCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVVVDAP*GIPWEG
Trigger: CCCTTCCCAGGGGATTCCTCAGGGAGCATCCACAAC...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGGCCTTGGGATGCCTTaGTGTCCTCCATGGATTCCT +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLGLGMP*CPPWIP
Trigger: AGGAATCCATGGAGGACATCAAGGCATCCCAAGGCC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGGCCTTGGGATGCCTTaGTGTCCTCCATGGATTCCT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGGLGMP*CPPWIP
Trigger: AGGAATCCATGGAGGACATCAAGGCATCCCAAGGCC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGCGTCTCTGAGGGTCTaGCGTTGTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIASLRV*RCWPCW
Trigger: CCAGCACGGCCAACAACGTCAGACCCTCAGAGACGC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACCCCTTGGGCGTCTCTaGGGGTCTGACGTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIPLGRL*GSDVVG
Trigger: GCCAACAACGTCAGACCCTCAGAGACGCCCAAGGGG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTCCTGGATGGCAAATaGCAGCGCTTCGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLFLDGK*QRFGQC
Trigger: GCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAA...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCAGATGGTGGCTCTGTaGTGCGGTTTGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSQMVAL*CGLSPS
Trigger: CGAGGGGGACAAACCGCAGCACAGAGCCACCATCTG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTCACTCAAAGAATCGTaGGCTTGCACTGTAACATTC +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQSLKES*ACTVTF
Trigger: GAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGA...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCAGATGCAGAGATCCTaGCCTGCGGGAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGQMQRS*PAGRPG
Trigger: CCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTGCCAACCATCTCTGTaGTGGGGAGTCGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKCQPSL*WGVGVP
Trigger: TGGGACCCCGACTCCCCAGCACAGAGATGGTTGGCA...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCTGGGAGATGGTTCCTaGATGGCAAATGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGLGDGS*MANASA
Trigger: AGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGGGGTGCTGTCACCATaGTTCCCGGGGGAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIGVLSP*FPGECL
Trigger: CAGGCACTCCCCCGGGAACCATGGTGACAGCACCCC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGCTTTGTCAGCAGGATaGTGGGGGCAGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIALSAG*WGQPAL
Trigger: GAGGGCAGGCTGCCCCCACCATCCTGCTGACAAAGC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGGTTGTTCTCCGGGTTaGCGGTCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARGCSPG*RSSSSS
Trigger: AGAGGAAGAAGAAGACCGCCAACCCGGAGAACAACC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAAGAAGCGGCCACCTCTaGAAGCCCCTTGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIRSGHL*KPLGRL
Trigger: GAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCAGCAGCCTGAGGGTCTaGCCAGCATCAGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGSSLRV*PASGVG
Trigger: ACCCACCCCTGATGCTGGCCAGACCCTCAGGCTGCT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGGTTCCACAGACCCTGTaGAGTTGCCCTTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARVPQTL*SCPCRS
Trigger: AGATCTACAAGGGCAACTTCACAGGGTCTGTGGAAC...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGCCCCTGGGAAGGGGCTaGGACACTGGTATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGPLGRG*DTGIEG
Trigger: GCCTTCGATACCAGTGTCTCAGCCCCTTCCCAGGGG...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGACACAAGGACAAGGGTaGCAGAGGCCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVTQGQG*QRPLGE
Trigger: CTCCCCAAGAGGCCTCTGTCACCCTTGTCCTTGTGT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCTGGTCTCGAACTCCTaGCCTCAGGTAATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKLVSNS*PQVIRL
Trigger: CAGGCGGATTACCTGAGGTCAGGAGTTCGAGACCAG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGGTAGAGCTGTGGGGTaGTGTCACCATGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIGRAVG*CHHGSR
Trigger: CCGGGAACCATGGTGACAGCACCCCACAGCTCTACC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCATGACATCCAATGGTaGCGTCATAAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGHDIQW*RHKAPG
Trigger: CCCTGGAGCCTTATGACGGCACCATTGGATGTCATG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCAGGGCCCTGTAGGCTaGCTGGGGAATTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVQGPVG*LGNSVA
Trigger: AGCTACAGAATTCCCCAGGCAGCCTACAGGGCCCTG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGAGATTCCCTGGGAGATaGTTCCTGGATGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARRFPGR*FLDGKC
Trigger: GCATTTGCCATCCAGGAACCATCTCCCAGGGAATCT...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTGTCTGGTAGAGCTGTaGGGTGCTGTCACCATGGTT +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGCLVEL*GAVTMV
Trigger: AACCATGGTGACAGCACCCCACAGCTCTACCAGACA...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGTGTCGGTGTTGCCATaGGAGCTGCAGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGVSVLP*ELQPVR
Trigger: CCTCACAGGCTGCAGCTCCCATGGCAACACCGACAC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGCTGGAGCGGGCCCTGTaGACAGGGAGCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLLERAL*TGSFQN
Trigger: ATTCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAG...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCTGGCTTGGAGGATGTaGTTGCCATGGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSLAWRM*LPWLLE
Trigger: CTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTTGGTGGGGCGGCTGGTaGCCCCCGGTGGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSWWGGW*PPVALS
Trigger: TGACAAAGCCACCGGGGGCCACCAGCCGCCCCACCA...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATATCTTTACTCCTGGAGTaGCCACCAGGTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSISLLLE*PPGAGG
Trigger: CCCGCCTGCACCTGGTGGCCACTCCAGGAGTAAAGA...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGTCGCAGCCACTGTCTaGGGCTGTGGTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIVAATV*GCGEEE
Trigger: CTCCTCTTCACCACAGCCCCAGACAGTGGCTGCGAC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGAGCCAAGAGTCACTATaGCTGGGGCCATCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVSQESL*LGPSCG
Trigger: CCCACAGGATGGCCCCAGCCATAGTGACTCTTGGCT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCTGTGGATACCACTGTaGAGAGAGGACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKLWIPL*REDWAP
Trigger: GGGTGCCCAGTCCTCTCTCCACAGTGGTATCCACAG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACTCTATAGTCGCCATTaGCTGGGGAGCGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSILYSRH*LGSGAL
Trigger: CAGAGCCCCGCTCCCCAGCCAATGGCGACTATAGAG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGGCAAGTCCACCGGCTaGTGCTGCGAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIGKSTG*CCEQVC
Trigger: GCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGCC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCTGTGAGTGGCAGAGCTaGGACAAGATCCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGCEWQS*DKIPGP
Trigger: GGGACCCGGGATCTTGTCCCAGCTCTGCCACTCACA...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGAGCTGCCAGCCTTGCTaGCCTCTCAACCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKSCQPC*PLNLER
Trigger: CCTTTCCAGGTTGAGAGGCCAGCAAGGCTGGCAGCT...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGTGTCTGGGGCTGTGGTaGAGAGGAGTAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGCLGLW*RGVAPE
Trigger: CTCTGGGGCTACTCCTCTTCACCACAGCCCCAGACA...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCCGGTCGGTCATGGTaGGGGTGGCCACAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSPGRSW*GWPQSP
Trigger: AGGAGACTGTGGCCACCCTCACCATGACCGACCGGG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATGGGGAGCGGGGCTCTaGGAGCTGGTCCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRWGAGL*ELVLRG
Trigger: ACCTCTGAGGACCAGCTCTCAGAGCCCCGCTCCCCA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCTCCTCCATGGATTCCTaGGGGCTCCATGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGISSMDS*GLHAPA
Trigger: GGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGA...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGCCAAGAGCCACATCTaGCATCCTGGTGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGAKSHI*HPGGAN
Trigger: GTTGGCACCACCAGGATGTCAGATGTGGCTCTTGGC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCATGGTGGGGGCAGCCTaGCCTCGAGGGCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTMVGAA*PRGRPS
Trigger: AGAGGGCCGCCCTCGAGGGCAGGCTGCCCCCACCAT...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCATGGGAGATGTTCCCTaGTGTCCCAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSMGDVP*CPRLPG
Trigger: ACCTGGAAGCCTGGGACAGCAGGGAACATCTCCCAT...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCTGGGCTGGTAGAGGTTaGAGAATCCAAGTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSWAGRG*RIQVLR
Trigger: GCGGAGGACTTGGATTCTGCAACCTCTACCAGCCCA...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGAGGGTGTGGGGCAGTTaGACAAGCTGGCACCTGTAT +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKRVWGS*TSWHLY
Trigger: ATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCT...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGCTGACATCCTGGTGGTaGCAACCATCTCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLLTSWW*QPSLCW
Trigger: CCAGCACAGAGATGGTTGGCACCACCAGGATGTCAG...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGGGGGTCCATCGGGATTaGGGGTCAGCATCACCACAG +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGGVHRD*GSASPQ
Trigger: CTGTGGTGATGCTGACCCCCAATCCCGATGGACCCC...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGAGGGAGCTTTCAGAATaGGGGGCGGTTACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLRELSE*GAVTVA
Trigger: TGCGACAGTAACCGCCCCCCATTCTGAAAGCTCCCT...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACTGGAGCGGGCCCTGTaGACAGGGAGCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSILERAL*TGSFQN
Trigger: ATTCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGTCCTTCTTTACTCCTaGAGTGGCCACCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSVLLYS*SGHQVQ
Trigger: CTGCACCTGGTGGCCACTCCAGGAGTAAAGAAGGAC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGTCTGCCCCAGAGGTGTaGAGCTTGGATTTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVSAPEV*SLDFVL
Trigger: GAGGACGAAATCCAAGCTCCACACCTCTGGGGCAGA...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGTGCTCTGCGAAGGCCTaGCTTGTCCTTTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGCSAKA*LVLCRP
Trigger: GGGCCTGCAAAGGACAAGCCAGGCCTTCGCAGAGCA...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGGCTGCTGTGGCATCTaGTGTCCCTCCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIGCCGI*CPSLAG
Trigger: ACCAGCCAAGGAGGGACACCAGATGCCACAGCAGCC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGAAGAGTCACTATGGCTaGGGCCATCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVKSHYG*GHPVGH
Trigger: GTGACCCACAGGATGGCCCCAGCCATAGTGACTCTT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGTATCGAAGGCAGCTaGGGTGGGCCCCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPGIEGS*GGPRGS
Trigger: GCTGCCACGGGGCCCACCCCAGCTGCCTTCGATACC...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGAGACCCTGGAGGGATaGGTTGGAGCTTGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGETLEG*VGACGV
Trigger: AACCCCACAAGCTCCAACCCATCCCTCCAGGGTCTC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACTGTGGATACCACTGTaGAGAGAGGACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSILWIPL*REDWAP
Trigger: GGGTGCCCAGTCCTCTCTCCACAGTGGTATCCACAG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGTCTCTTACCTCACCTaGCCAGGGTTCCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIVSYLT*PGFLGS
Trigger: GGATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGAC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCAGGTCACAGGTATGTaGGTGGCAGAGCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGQVTGM*VAELGQ
Trigger: TTGTCCCAGCTCTGCCACTCACATACCTGTGACCTG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCTGTGGTGCTCAGCCTaGAACTTGCTAATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSLWCSA*NLLIQA
Trigger: GGCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCGAATTGAGTGGCTTGTaGGCAGGGAAGGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSELSGL*AGKASE
Trigger: CTCAGAAGCCTTCCCTGCTCACAAGCCACTCAATTC...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTAGGAGGGTGCCCCTCTaGACGGGGTGTCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPRRVPL*TGCRCC
Trigger: GCAACACCGACACCCCGTGCAGAGGGGCACCCTCCT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCATGGTGGAGATGGTGTaGGTAGGAGGGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIMVEMV*VGGCPS
Trigger: AGAGGGGCACCCTCCTACGCACACCATCTCCACCAT...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATCCACCGGCTGGTGCTaGGAGCAGGTTTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRSTGWC*EQVCSA
Trigger: GGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCAAGTCCACCGGCTGGTaGTGCGAGCAGGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIKSTGW*CEQVCS
Trigger: ACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTT...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTTTCCTGAGTTAATCTaGTCTTTATTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQFPELI*SLFSPH
Trigger: ATGTGGGGAAAATAAAGAGCAGATTAACTCAGGAAA...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCTGGGAGATGGTTCCTaGATGGCAAATGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGLGDGS*MANASA
Trigger: AGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCCTGAAGAGATTCCCTaGGAGATGGTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKPEEIP*EMVPGW
Trigger: CCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGGGGTGCTGTCACCATaGTTCCCGGGGGAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLGVLSP*FPGECL
Trigger: CAGGCACTCCCCCGGGAACCATGGTGACAGCACCCC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAAGGATGTGGTTGCCATaGCTGCTGGAGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRRMWLP*LLERAL
Trigger: CAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCTGGCTTGGAGGATGTaGTTGCCATGGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGILAWRM*LPWLLE
Trigger: CTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAG...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGGCGGCCCTCTGGCTTaGAGGATGTGGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSGGPLA*RMWLPW
Trigger: CCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATCGAGGGCGGCCCTCTaGCTTGGAGGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRSRAAL*LGGCGC
Trigger: GCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATTGTCAGCAGGATGGTaGGGGCAGCCTGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRLSAGW*GQPALE
Trigger: CTCGAGGGCAGGCTGCCCCCACCATCCTGCTGACAA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGTATTGCTGGGCACTGTaGTCGCAGCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGYCWAL*SQPLSG
Trigger: CCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATA...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGAGCTTGTGGGGTTGTaGATGCTCCCTGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGELVGL*MLPEES
Trigger: GGATTCCTCAGGGAGCATCCACAACCCCACAAGCTC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAATGGGTTGGAGCTTGTaGGGTTGTGGATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIMGWSL*GCGCSL
Trigger: CAGGGAGCATCCACAACCCCACAAGCTCCAACCCAT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCATGGGTTGGAGCTTGTaGGGTTGTGGATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGMGWSL*GCGCSL
Trigger: CAGGGAGCATCCACAACCCCACAAGCTCCAACCCAT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGCCTGGAGGGATGGGTTaGAGCTTGTGGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGPGGMG*SLWGCG
Trigger: TCCACAACCCCACAAGCTCCAACCCATCCCTCCAGG...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGGAGACCCTGGAGGGATaGGTTGGAGCTTGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGETLEG*VGACGV
Trigger: AACCCCACAAGCTCCAACCCATCCCTCCAGGGTCTC...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGTGCTTTCTGAGACCCTaGAGGGATGGGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLCFLRP*RDGLEL
Trigger: AAGCTCCAACCCATCCCTCCAGGGTCTCAGAAAGCA...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCTGCTCAGGCAGATGGTaGCTCTGTGCTGCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGCSGRW*LCAAVC
Trigger: ACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCA...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACGTTGTTGGCCGTGCTaGACACAGCACGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRRCWPC*TQHGEA
Trigger: TGCCTCCCCGTGCTGTGTCCAGCACGGCCAACAACG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCTCCCAGGAATGTCACTaGGGAGTCATCCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSSQECH*GVIHGL
Trigger: CAAGCCATGGATGACTCCCCAGTGACATTCCTGGGA...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCAGCCTCCCAAGAAGCTaGGATATTACAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSSLPRS*DITGAC
Trigger: GCAGGCACCTGTAATATCCCAGCTTCTTGGGAGGCT...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGTGGGGAGCGGGGCTCTaGGAGCTGGTCCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQWGAGL*ELVLRG
Trigger: ACCTCTGAGGACCAGCTCTCAGAGCCCCGCTCCCCA...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATCTGCCGTCTTCCCCTaGGGCGGTCCAGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRSAVFP*GGPVPF
Trigger: AAAGGGAACTGGACCGCCTCAGGGGAAGACGGCAGA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAGGGAGCAGTGGAAGCTaGGAGCTGGATGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRGSSGS*ELDGKS
Trigger: GGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCC...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGGGTTGAAGAGTCTTTaGAGAGAGACAACAACCGAA +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLGLKSL*RETTTE
Trigger: TTCGGTTGTTGTCTCTCTTCAAAGACTCTTCAACCC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCTATATTCCCAGCACTaGCCCAGGCACTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSLYSQH*PRHFEA
Trigger: AGCTTCAAAGTGCCTGGGTCAGTGCTGGGAATATAG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGCACAGTGTGACATGTaGCCCTGTCTGTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGAQCDM*PCLFIP
Trigger: AGGGATGAACAGACAGGGTCACATGTCACACTGTGC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGTGTGCGTAGGAGGGTaGCCCTCTGCACGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTVCVGG*PSARGV
Trigger: GACACCCCGTGCAGAGGGGCACCCTCCTACGCACAC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATACATGACATCCAATGGTaGCGTCATAAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIHDIQW*RHKAPG
Trigger: CCCTGGAGCCTTATGACGGCACCATTGGATGTCATG...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGTGTCGGTGTTGCCATaGGAGCTGCAGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSVSVLP*ELQPVR
Trigger: CCTCACAGGCTGCAGCTCCCATGGCAACACCGACAC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTTCGAGGGCGGCCCTCTaGCTTGGAGGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPSRAAL*LGGCGC
Trigger: GCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGA...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCAGAGGTGTGGAGCTTaGATTTCGTCCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIQRCGA*ISSSLS
Trigger: GGACAGCGAGGACGAAATCCAAGCTCCACACCTCTG...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAAGAGTCACTATGGCTaGGGCCATCCTGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGKSHYG*GHPVGH
Trigger: GTGACCCACAGGATGGCCCCAGCCATAGTGACTCTT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGAGCTTGTGGGGTTGTaGATGCTCCCTGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIELVGL*MLPEES
Trigger: GGATTCCTCAGGGAGCATCCACAACCCCACAAGCTC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCCTGTGGAGAGAGGACTaGGCACCCGGTCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLLWRED*APGRSW
Trigger: CCATGACCGACCGGGTGCCCAGTCCTCTCTCCACAG...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCTCTATAGTCGCCATTaGCTGGGGAGCGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSLYSRH*LGSGAL
Trigger: CAGAGCCCCGCTCCCCAGCCAATGGCGACTATAGAG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGACGAAAAATACGGAATaGCAAAGTGATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARTKNTE*QSDACC
Trigger: ACAGCAGGCATCACTTTGCCATTCCGTATTTTTCGT...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCAGGAGATGGGCACGCTaGTGGCCAGGATCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTRRWAR*WPGSPR
Trigger: CCTGGGTGATCCTGGCCATCAGCGTGCCCATCTCCT...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGACAACCGAACTCATGTaGAGGAGGTTCATACAACAT +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLTTELM*RRFIQH
Trigger: ATGTTGTATGAACCTCCTTCACATGAGTTCGGTTGT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCTATCCTGTATTGTCCTaGACACCGGAGGGTATAGAG +
Preference number: 4 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSYPVLS*TPEGIE
Trigger: CTCTATACCCTCCGGTGTTCAGGACAATACAGGATA...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCTTTCTTCAGATGGTTaGAGAGGAAAGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVLSSDG*RGKGQG
Trigger: TCCTTGCCCCTTTCCTCTTCAACCATCTGAAGAAAG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCTGCTCATTCATTTCTaGATGTTGGATGACCACCAA +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGLLIHF*MLDDHQ
Trigger: TTGGTGGTCATCCAACATGCAGAAATGAATGAGCAG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGGTATCATCTGGTCCTaGTTATCCTCCAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGGIIWS*LSSSLF
Trigger: GAATAAACTGGAGGATAAGCAGGACCAGATGATACC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGACGGGGTGTCGGTGTTaGCATGGGAGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQTGCRC*HGSCSL
Trigger: CAGGCTGCAGCTCCCATGGCAACACCGACACCCCGT...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAGGCGATATCCATCTTaGTCAGGCAGATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGRRYPS*SGRWWL
Trigger: GAGCCACCATCTGCCTGAGCAAGATGGATATCGCCT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTTTCCTGAGGGCTCCATaGTCCTGCCTGCCATCCACA +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSFLRAP*SCLPST
Trigger: TGTGGATGGCAGGCAGGAGCATGGAGCCCTCAGGAA...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCAGAACAGAAAGTTCTaGTCCACGCTGTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGQNRKF*STLSSP
Trigger: AGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGGACTGAGTATATCCTaGCCCAGGTTCATCATCACC +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGGLSIS*PRFIIT
Trigger: GGTGATGATGAACCTGGGGCAGGATATACTCAGTCC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAATCTGCTCCTGCCTCTaGATGGCTTGCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRICSCL*MACLRS
Trigger: AGAGCGGAGGCAAGCCATGCAGAGGCAGGAGCAGAT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGCTTTGTCAGCAGGATaGTGGGGGCAGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTALSAG*WGQPAL
Trigger: GAGGGCAGGCTGCCCCCACCATCCTGCTGACAAAGC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCTGTGGTGGGGCGGCTaGTGGCCCCCGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNILWWGG*WPPVAL
Trigger: CAAAGCCACCGGGGGCCACCAGCCGCCCCACCACAG...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTAGCCAAGAGTCACTATaGCTGGGGCCATCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSSQESL*LGPSCG
Trigger: CCCACAGGATGGCCCCAGCCATAGTGACTCTTGGCT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGGGTATCGAAGGCAGCTaGGGTGGGCCCCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEGIEGS*GGPRGS
Trigger: GCTGCCACGGGGCCCACCCCAGCTGCCTTCGATACC...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCAATTGCCTGTGGCTGTaGATACCACTGTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGNCLWL*IPLWRE
Trigger: CTCTCTCCACAGTGGTATCCACAGCCACAGGCAATT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCGGGGCTCTGAGAGCTaGTCCTCAGAGGTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSRGSES*SSEVSR
Trigger: CCTTGAAACCTCTGAGGACCAGCTCTCAGAGCCCCG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAGGGGAATATGGCCTTaGGATGCCTTGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGRGIWP*DALMSS
Trigger: GGAGGACATCAAGGCATCCCAAGGCCATATTCCCCT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTAAGCTGAGAGCTGGATaGCAAGTCCACCGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSKLRAG*QVHRLV
Trigger: CACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAGTGGAAGCTGAGAGCTaGATGGCAAGTCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRVEAES*MASPPA
Trigger: AGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCAC...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGAGGTTCATACAACATTaGGAACACACTTTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: REAATSGSPLGVSEGLTLRFIQH*EHTFEG
Trigger: GCCTTCAAAAGTGTGTTCTCAATGTTGTATGAACCT...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTAGGTTCATACAACATTaGGAACACACTTTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGRFIQH*EHTFEG
Trigger: GCCTTCAAAAGTGTGTTCTCAATGTTGTATGAACCT...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGTTCATGCTCCTGGCCTaGTTATATTTCTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLFMLLA*LYFSQG
Trigger: TCCCTGAGAGAAATATAATCAGGCCAGGAGCATGAA...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGGTAGAGCTGTGGGGTaGTGTCACCATGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTGRAVG*CHHGSR
Trigger: CCGGGAACCATGGTGACAGCACCCCACAGCTCTACC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTATGGTGGAGATGGTGTaGGTAGGAGGGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPMVEMV*VGGCPS
Trigger: AGAGGGGCACCCTCCTACGCACACCATCTCCACCAT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGCAGATGGTGGCTCTGTaGTGCGGTTTGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQQMVAL*CGLSPS
Trigger: CGAGGGGGACAAACCGCAGCACAGAGCCACCATCTG...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACTCCATGCTCCTGCCTaGCATCCACAACTTGGATGG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRLHAPA*HPQLGW
Trigger: CCATCCAAGTTGTGGATGGCAGGCAGGAGCATGGAG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTCAAATTGTCCCTGGTaGACAGTAGGTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKSNCPW*TVGAET
Trigger: TGTTTCAGCACCTACTGTGCACCAGGGACAATTTGA...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTAACTGTGGCCTAAAGTaGTGGCCGCCTTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPNCGLK*WPPCHR
Trigger: CCTGTGGCAAGGCGGCCAGCACTTTAGGCCACAGTT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGATATTACAGGTGCCTaGCACCATGTCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKDITGA*HHVWLI
Trigger: AATTAGCCAGACATGGTGGCAGGCACCTGTAATATC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTTTGCCTCCGCTCTACTaGCCACTCTGGGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSLPPLY*PLWVPI
Trigger: AATGGGAACCCAGAGTGGGCAGTAGAGCGGAGGCAA...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGCTTCATGGTATCATCTaGTCCTGCTTATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLLHGII*SCLSSS
Trigger: ACTGGAGGATAAGCAGGACCAGATGATACCATGAAG...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGTTGTCAGCAGGATGGTaGGGGCAGCCTGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQLSAGW*GQPALE
Trigger: CTCGAGGGCAGGCTGCCCCCACCATCCTGCTGACAA...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGTCCTTCTTTACTCCTaGAGTGGCCACCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSVLLYS*SGHQVQ
Trigger: CTGCACCTGGTGGCCACTCCAGGAGTAAAGAAGGAC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATCTGCCCCAGAGGTGTaGAGCTTGGATTTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRSAPEV*SLDFVL
Trigger: GAGGACGAAATCCAAGCTCCACACCTCTGGGGCAGA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCTATTGCTGGGCACTGTaGTCGCAGCCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLYCWAL*SQPLSG
Trigger: CCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATA...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCCTTGGGCGTCTCTGAGGGTCTGACGTTGTTGGCCGTGCTGGACACAGCACGGTTAGTTGCTTCTTTGTaGGTTGAAGAGTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGVSEGLTLLAVLDTARLVASL*VEESLK
Trigger: CTTCAAAGACTCTTCAACCCACAAAGAAGCAACTAA...CCGTGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGAGACGCCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCACACAGAACACAGGCTaGCAGGGGAAAAGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGTQNTG*QGKSVS
Trigger: AGATACACTTTTCCCCTGCCAGCCTGTGTTCTGTGT...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCCTGAGGTCAGAGAGGTaGGGTGGCCTGTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLLRSER*GGLSRF
Trigger: GAATCTGGACAGGCCACCCCACCTCTCTGACCTCAG...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACTCTACTGCCCACTCTaGGTTCCCATTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRLYCPL*VPIPEQ
Trigger: CTGCTCAGGAATGGGAACCCAGAGTGGGCAGTAGAG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR TCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGTTGATTAACCATGTGTaGATTGAGTGGCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLLINHV*IEWLVS
Trigger: GCTCACAAGCCACTCAATTCACACATGGTTAATCAA...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGATGACCCATCGGCTCTaGTGCTTTTCACTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGMTHRL*CFSLLI
Trigger: AATGAGCAGTGAAAAGCAGCAGAGCCGATGGGTCAT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSQRFGQ*QDQQET
Trigger: AGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGTGGTTCCCGGGGGAGTaGCTGAAGGGAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQWFPGE*LKGGPE
Trigger: TTCAGGTCCTCCCTTCAGGCACTCCCCCGGGAACCA...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATACGGGGTGTCGGTGTTaGCATGGGAGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNTGCRC*HGSCSL
Trigger: CAGGCTGCAGCTCCCATGGCAACACCGACACCCCGT...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGTGCCCATGAGGTATTaGTGGGCACTGTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTVPMRY*WALWSQ
Trigger: CTGCGACCACAGTGCCCAGCAATACCTCATGGGCAC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATGCCTGGCTTGTCCTTTaGAGGCCCCAGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNAWLVL*RPQGGG
Trigger: ACCACCTCCCTGGGGCCTGCAAAGGACAAGCCAGGC...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGATGGTGGCTCTGTGCTaGGGTTTGTCCCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEMVALC*GLSPSA
Trigger: GGCCGAGGGGGACAAACCGCAGCACAGAGCCACCAT...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATATGGTGGCTCTGTGCTaGGGTTTGTCCCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNMVALC*GLSPSA
Trigger: GGCCGAGGGGGACAAACCGCAGCACAGAGCCACCAT...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTGAAAAGCTTCAACTaGTCTGTTTCTCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKLKSFN*SVSPEA
Trigger: TGCCTCAGGAGAAACAGAGCAGTTGAAGCTTTTCAA...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGAAGCGTTTTGTAAACTaGGCAGCTCTATGCAAACAC +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVKRFVN*AALCKH
Trigger: GTGTTTGCATAGAGCTGCGCAGTTTACAAAACGCTT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCTTCATGATTCTGTCCTaGAGTAGAGGGTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIFMILS*SRGCGS
Trigger: GCTTCCACACCCTCTACTCCAGGACAGAATCATGAA...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGACCTGAAGAGATTCCCTaGGAGATGGTTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRPEEIP*EMVPGW
Trigger: CCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGG...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGGTTGTTCTCCGGGTTaGCGGTCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSGCSPG*RSSSSS
Trigger: AGAGGAAGAAGAAGACCGCCAACCCGGAGAACAACC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGGGGACTGGATCTCCCTaGGCAGCTCCACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEGTGSP*AAPQHA
Trigger: GGCATGCTGTGGAGCTGCCCAGGGAGATCCAGTCCC...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAAAACATGACATCCAATaGTGCCGTCATAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIKHDIQ*CRHKAP
Trigger: TGGAGCCTTATGACGGCACCATTGGATGTCATGTTT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTAGGGGAATATGGCCTTaGGATGCCTTGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSRGIWP*DALMSS
Trigger: GGAGGACATCAAGGCATCCCAAGGCCATATTCCCCT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAAATGTTAGGGGAATATaGCCTTGGGATGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSINVRGI*PWDALM
Trigger: CATCAAGGCATCCCAAGGCCATATTCCCCTAACATT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCGGAATTAAGCTCTCTTaGGTTCCCAGGAATGTCACT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGGIKLS*VPRNVT
Trigger: AGTGACATTCCTGGGAACCCAAGAGAGCTTAATTCC...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGGTGTTATATGACTATTaGGTGGCTCAAGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLVLYDY*VAQGQS
Trigger: GCTTTGTCCTTGAGCCACCCAATAGTCATATAACAC...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTCCCTGCGGGAAGGCCTaGGAGTCAGAACAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPPCGKA*ESEQKV
Trigger: AACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGG...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGTTCATGCCAGGGTGTaGGGCAGTTGCACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTVHARV*GSCTSW
Trigger: CCAGCTTGTGCAACTGCCCCACACCCTGGCATGAAC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGGTTGTGGATGCTCCCTaGGGAATCCCCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEVVDAP*GIPWEG
Trigger: CCCTTCCCAGGGGATTCCTCAGGGAGCATCCACAAC...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTAGGAGATGGGCACGCTaGTGGCCAGGATCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIRRWAR*WPGSPR
Trigger: CCTGGGTGATCCTGGCCATCAGCGTGCCCATCTCCT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGTCCTCCATGGATTCCTaGGGGCTCCATGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQESSMDS*GLHAPA
Trigger: GGCAGGAGCATGGAGCCCTCAGGAATCCATGGAGGA...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGATACCATGGCCTTTTaGGAAAACAAAGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIDTMAF*ENKAEP
Trigger: GGGTTCAGCTTTGTTTTCTCAAAAGGCCATGGTATC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCGTCTCTGAGGGTCTaGCGTTGTTGGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALASLRV*RCWPCW
Trigger: CCAGCACGGCCAACAACGTCAGACCCTCAGAGACGC...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGAAAAACTGTGTTATATaGCTATTGGGTGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVKNCVI*LLGGSR
Trigger: CCTTGAGCCACCCAATAGTCATATAACACAGTTTTT...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATGGCACCTGTATAGGCTaGGACCTCACAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNGTCIG*DLTAQS
Trigger: GCTCTGGGCTGTGAGGTCTCAGCCTATACAGGTGCC...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPQRFGQ*QDQQET
Trigger: AGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTG...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATCTTGGAGGATGTGGTTaGCATGGCTGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNLGGCG*HGCWSG
Trigger: CCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAG...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCCTGGCTTGTCCTTTaGAGGCCCCAGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALAWLVL*RPQGGG
Trigger: ACCACCTCCCTGGGGCCTGCAAAGGACAAGCCAGGC...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCCTGGGATCCCCAGGTaGTCAAGAATAGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIPGIPR*SRIVIK
Trigger: CTTAATAACTATTCTTGAGCACCTGGGGATCCCAGG...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGAACTGCGCAGCTCTATaGAAACACAAGATGTTAACT +
Preference number: 4 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLNCAAL*KHKMLT
Trigger: AGTTAACATCTTGTGTTTGCATAGAGCTGCGCAGTT...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCATGCAAAAGCCCACCTaGACAGATGGCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTMQKPT*TDGLRW
Trigger: CCACCTCAGGCCATCTGTGCAGGTGGGCTTTTGCAT...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTACCAGCTGATTCCTaGCTTAGATTGATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKLPADS*LRLMQK
Trigger: CTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAA...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCTTCATGGTATCATCTaGTCCTGCTTATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGILHGII*SCLSSS
Trigger: ACTGGAGGATAAGCAGGACCAGATGATACCATGAAG...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGGAGATGGTTCCTGGATaGCAAATGCCAGCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQEMVPG*QMPALR
Trigger: CCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTC...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCTGGTGGCCCCCGGTaGCTTTGTCAGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALAGGPR*LCQQDG
Trigger: ACCATCCTGCTGACAAAGCCACCGGGGGCCACCAGC...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATTCTTTACTCCTGGAGTaGCCACCAGGTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNSLLLE*PPGAGG
Trigger: CCCGCCTGCACCTGGTGGCCACTCCAGGAGTAAAGA...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGCCTGACCAGGGTTCCTaGGATCCCCAGGTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEPDQGS*DPQVLK
Trigger: CTTGAGCACCTGGGGATCCCAGGAACCCTGGTCAGG...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAAACATGACATCCAATaGTGCCGTCATAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGKHDIQ*CRHKAP
Trigger: TGGAGCCTTATGACGGCACCATTGGATGTCATGTTT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCGTTGTTGGCCGTGCTaGACACAGCACGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIRCWPC*TQHGEA
Trigger: TGCCTCCCCGTGCTGTGTCCAGCACGGCCAACAACG...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTAGAAGCGGCCACCTCTaGAAGCCCCTTGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIRSGHL*KPLGRL
Trigger: GAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACGCCAGCACCGGGGGTTaGCAGAGGGCCAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHASTGG*QRASSV
Trigger: AACAGAGCTGGCCCTCTGCCAACCCCCGGTGCTGGC...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGATGTTTAGCTTCTCGTaGCATCTAGGGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGMFSFS*HLGSHL
Trigger: CAGATGAGACCCTAGATGCCACGAGAAGCTAAACAT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
3UTR CAA 72 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATaGATGCAAAAGCCCACCTGCACAGATGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLR*MQKPTCTDGLR
Trigger: CCTCAGGCCATCTGTGCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGTTTCTGCATGTTGGATaGCCACCAATCTATCACCAA +
Preference number: 4 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGFLHVG*PPIYHQ
Trigger: TTGGTGATAGATTGGTGGTCATCCAACATGCAGAAA...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTGGGAGCAGTGGAAGCTaGGAGCTGGATGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIGSSGS*ELDGKS
Trigger: GGACTTGCCATCCAGCTCTCAGCTTCCACTGCTCCC...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTGCTCTGTTTCTCCTaGGGCAGTAGCCATCAAGAC +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLLCFS*GSSHQD
Trigger: GTCTTGATGGCTACTGCCTCAGGAGAAACAGAGCAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGGAAACCTAGAGAGGTaGACTTGCTCAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTGNLER*TCSRPC
Trigger: GCATGGCCTTGAGCAAGTTCACCTCTCTAGGTTTCC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAACCCATCGGCTCTGCTaGTTTTCACTGCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRTHRLC*FSLLIH
Trigger: ATGAATGAGCAGTGAAAAGCAGCAGAGCCGATGGGT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGTTCCTGGATGGCAAATaGCAGCGCTTCGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQFLDGK*QRFGQC
Trigger: GCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAA...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTTGGTTCCCGGGGGAGTaGCTGAAGGGAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALWFPGE*LKGGPE
Trigger: TTCAGGTCCTCCCTTCAGGCACTCCCCCGGGAACCA...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCTTGGAGGATGTGGTTaGCATGGCTGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNILGGCG*HGCWSG
Trigger: CCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAG...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGTTGTGGGGTTGTGGATaGTCCCTGAGGAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQLWGCG*SLRNPL
Trigger: CAGGGGATTCCTCAGGGAGCATCCACAACCCCACAA...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATCGCCCCCGAGTCCAGTaGTCTAACAGCCCATGTTGT +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNRPRVQ*SNSPCC
Trigger: ACAACATGGGCTGTTAGAGCACTGGACTCGGGGGCG...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTGCCTCTGCATGGCTTaGCTCCGCTCTACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNICLCMA*LRSTAH
Trigger: GTGGGCAGTAGAGCGGAGGCAAGCCATGCAGAGGCA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIVNFSS*YHLVLL
Trigger: AAGCAGGACCAGATGATACCATGAAGAGAAGTTTAC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTCCAGGGAGGTGGTGGTaGGTGCCCATGAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALPGRWW*VPMRYC
Trigger: GCAATACCTCATGGGCACCCACCACCACCTCCCTGG...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGGAGGTTTCAAGGGACTaGATCTCCCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEEVSRD*ISLGSS
Trigger: GGAGCTGCCCAGGGAGATCCAGTCCCTTGAAACCTC...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCCTGGGGAGTCATCCATaGCTTGTCAGATGTGTGACA +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLLGSHP*LVRCVT
Trigger: TGTCACACATCTGACAAGCCATGGATGACTCCCCAG...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTTCACAGGTATGTGAGTaGCAGAGCTGGGACAAGATC +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPSQVCE*QSWDKI
Trigger: GATCTTGTCCCAGCTCTGCCACTCACATACCTGTGA...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCTCCTGCCTCTGCATaGCTTGCCTCCGCTCTACTG +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALAPASA*LASALL
Trigger: CAGTAGAGCGGAGGCAAGCCATGCAGAGGCAGGAGC...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR TCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGTCTCTTACCTCACCTaGCCAGGGTTCCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALVSYLT*PGFLGS
Trigger: GGATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGAC...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCGGGCTAACGGGGATTTaGGAGATTAGCTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTGLTGI*EISWYR
Trigger: TCTGTACCAGCTAATCTCTCAAATCCCCGTTAGCCC...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTATTCCTGCCTTAGATTaGTGCAAAAGCCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPIPALD*CKSPPA
Trigger: TGCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAAT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp ACCTGCACAGATGGCCTGAGGTGGGCTCCACACAGCTTGACTGAGCACAGTGTGCTCTTCCCACTAAATTaGCCTATTTTAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: TCTDGLRWAPHSLTEHSVLFPLN*PILNLH
Trigger: ATGGAGATTTAAAATAGGGCAATTTAGTGGGAAGAG...CACACTGTGCTCAGTCAAGCTGTGTGGAGCCCACCTCAGGCCATCTGTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGCTGGGATATTACAGGTaGCTGCCACCATGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQLGYYR*LPPCLA
Trigger: AGCCAGACATGGTGGCAGGCACCTGTAATATCCCAG...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATATTCATTTCTGCATGTTaGATGACCACCAATCTATCA +
Preference number: 4 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIFISAC*MTTNLS
Trigger: TGATAGATTGGTGGTCATCCAACATGCAGAAATGAA...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCTTCATGGTATCATCTaGTCCTGCTTATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSLHGII*SCLSSS
Trigger: ACTGGAGGATAAGCAGGACCAGATGATACCATGAAG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIVNFSS*YHLVLL
Trigger: AAGCAGGACCAGATGATACCATGAAGAGAAGTTTAC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACGGGGTCCATCGGGATTaGGGGTCAGCATCACCACAG +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHGVHRD*GSASPQ
Trigger: CTGTGGTGATGCTGACCCCCAATCCCGATGGACCCC...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTGGTGGGGCGGCTGGTaGCCCCCGGTGGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSWWGGW*PPVALS
Trigger: TGACAAAGCCACCGGGGGCCACCAGCCGCCCCACCA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTGAGGTTTCAAGGGACTaGATCTCCCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIEVSRD*ISLGSS
Trigger: GGAGCTGCCCAGGGAGATCCAGTCCCTTGAAACCTC...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCGGGGCTCTGAGAGCTaGTCCTCAGAGGTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIRGSES*SSEVSR
Trigger: CCTTGAAACCTCTGAGGACCAGCTCTCAGAGCCCCG...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTCTGGAGGAGGTCATaGAGTCCCAATTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLWRRS*SPNFLE
Trigger: CTCAAGGAAATTGGGACTCCATGACCTCCTCCAGAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCCTAGAAGGTGGGGCATaGAAACCTAGAGAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTLEGGA*KPREVN
Trigger: GTTCACCTCTCTAGGTTTCCATGCCCCACCTTCTAG...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGAACCATCTGGGAAGTaGGAAAAGTGCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLEPSGK*EKCCFL
Trigger: GAGGAAACAGCACTTTTCCCACTTCCCAGATGGTTC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATCTCTGCTCCTGCAGCTaGCATGGTGAAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNLCSCS*HGETPG
Trigger: TCCAGGTGTTTCACCATGCCAGCTGCAGGAGCAGAG...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAACCCCAATAAACATTTaGTCCTTGAAGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRTPINI*SLKKEG
Trigger: CCCTTCCTTCTTCAAGGATCAAATGTTTATTGGGGT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATGCTTCTTTGTGGGTTaGAGAGTCTTTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRCFFVG*RVFEER
Trigger: TCTCTCTTCAAAGACTCTTCAACCCACAAAGAAGCA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCAGAGCCTCTGGGGATaGGGAGAGCTGAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHQSLWG*GELKPR
Trigger: TCTTGGCTTCAGCTCTCCTCATCCCCAGAGGCTCTG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTTGTGGGGTTGTGGATaGTCCCTGAGGAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNILWGCG*SLRNPL
Trigger: CAGGGGATTCCTCAGGGAGCATCCACAACCCCACAA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTATGGGAGATGTTCCCTaGTGTCCCAGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIMGDVP*CPRLPG
Trigger: ACCTGGAAGCCTGGGACAGCAGGGAACATCTCCCAT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTAAAGAATCGTGCGCTTaGACTGTAACATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSKESCA*TVTFSF
Trigger: GAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGATCACTCAAAGAATCGTaGGCTTGCACTGTAACATTC +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRSLKES*ACTVTF
Trigger: GAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGA...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp GAAAGGGGCAAGGAGGGGGCTGTGGTGCTCAGCCTGAAACTTGCTAATTCAGGCCTGACACACAATGGATaGTTAATTAATGACAGTTCT +
Preference number: 4 (lower is better)
Translates to: ERGKEGAVVLSLKLANSGLTHNG*LINDSS
Trigger: AGAACTGTCATTAATTAAGCATCCATTGTGTGTCAG...GCCTGAATTAGCAAGTTTCAGGCTGAGCACCACAGCCCCCTCCTTGCCCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGAGATTCCCTGGGAGATaGTTCCTGGATGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQRFPGR*FLDGKC
Trigger: GCATTTGCCATCCAGGAACCATCTCCCAGGGAATCT...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTAGGGAGCTTTCAGAATaGGGGGCGGTTACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALRELSE*GAVTVA
Trigger: TGCGACAGTAACCGCCCCCCATTCTGAAAGCTCCCT...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCCTGGAGGGATGGGTTaGAGCTTGTGGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHPGGMG*SLWGCG
Trigger: TCCACAACCCCACAAGCTCCAACCCATCCCTCCAGG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGTGCTTTCTGAGACCCTaGAGGGATGGGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQECFLRP*RDGLEL
Trigger: AAGCTCCAACCCATCCCTCCAGGGTCTCAGAAAGCA...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CCA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAACGAAAAATACGGAATaGCAAAGTGATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRTKNTE*QSDACC
Trigger: ACAGCAGGCATCACTTTGCCATTCCGTATTTTTCGT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCCCCTGGGAAGGGGCTaGGACACTGGTATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSPLGRG*DTGIEG
Trigger: GCCTTCGATACCAGTGTCTCAGCCCCTTCCCAGGGG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGTTACAGGTGTGCGTATaGGAAGGGAGGAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQELQVCV*EGRKWG
Trigger: ACCCCATTTCCTCCCTTCTCATACGCACACCTGTAA...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACTCAGGTGATAGGATCTaGGCAGGAGGAGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHSGDRI*AGGDGH
Trigger: GTGCCCATCTCCTCCTGCTCAGATCCTATCACCTGA...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGCATAGAAGGAATTTCTaGGTGTTAGGGCTAACGGGG +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQHRRNF*VLGLTG
Trigger: CCCCGTTAGCCCTAACACTCAGAAATTCCTTCTATG...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCTGTTCGCAGCAGCCTaGGGGTCTGGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSLFAAA*GSGQHQ
Trigger: CTGATGCTGGCCAGACCCTCAGGCTGCTGCGAACAG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCATTTGTGGAAGGGCATaGTTTCAGGTGATAGGATCT +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLICGRA*FQVIGS
Trigger: AGATCCTATCACCTGAAAGCATGCCCTTCCACAAAT...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCAAATGCCAAACACAATaGCTGACACACAATGGATGC +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLKCQTQ*LTHNGC
Trigger: GCATCCATTGTGTGTCAGGCATTGTGTTTGGCATTT...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTATGCAGTCATACATCTaGCAGCACTTCAAATTGTCC +
Preference number: 4 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPMQSYI*QHFKLS
Trigger: GGACAATTTGAAGTGCTGGCAGATGTATGACTGCAT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACAAGTGCTGGCCGCCTTaGCACAGGTCACAGGTATGT +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHKCWPP*HRSQVC
Trigger: ACATACCTGTGACCTGTGGCAAGGCGGCCAGCACTT...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATCCCTGTCCCCTTCTCTaGTGTCTCTGTTCTTCATTG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNPCPLL*CLCSSL
Trigger: CAATGAAGAACAGAGACACCAGAGAAGGGGACAGGG...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTTACAGGTGTGCGTATaGGAAGGGAGGAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNILQVCV*EGRKWG
Trigger: ACCCCATTTCCTCCCTTCTCATACGCACACCTGTAA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTTTCAGATGGAGCCCTaGGTACTGTATTCACATTTG +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTFQMEP*VLYSHL
Trigger: CAAATGTGAATACAGTACTCAGGGCTCCATCTGAAA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCTGTCTGTTCATCCCTaGGACTCCCAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSLSVHP*DSQGPG
Trigger: TCCTGGGCCCTGGGAGTCTCAGGGATGAACAGACAG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGAAAGAATCGTGCGCTTaGACTGTAACATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQKESCA*TVTFSF
Trigger: GAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTT...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCACTACCTTTCACTCTaGTCCTGCAGCTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHHYLSL*SCSWHG
Trigger: ACCATGCCAGCTGCAGGAGCAGAGTGAAAGGTAGTG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTCAGGGGTGGGTTCATaGCAGGGTGTGGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSSGVGS*QGVGQL
Trigger: CAACTGCCCCACACCCTGGCATGAACCCACCCCTGA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLVNFSS*YHLVLL
Trigger: AAGCAGGACCAGATGATACCATGAAGAGAAGTTTAC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGTCGCAGCCACTGTCTaGGGCTGTGGTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSVAATV*GCGEEE
Trigger: CTCCTCTTCACCACAGCCCCAGACAGTGGCTGCGAC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCCAGGGAGGTGGTGGTaGGTGCCCATGAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSPGRWW*VPMRYC
Trigger: GCAATACCTCATGGGCACCCACCACCACCTCCCTGG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTGCTCTGCGAAGGCCTaGCTTGTCCTTTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSCSAKA*LVLCRP
Trigger: GGGCCTGCAAAGGACAAGCCAGGCCTTCGCAGAGCA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGGCTGCTGTGGCATCTaGTGTCCCTCCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSGCCGI*CPSLAG
Trigger: ACCAGCCAAGGAGGGACACCAGATGCCACAGCAGCC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTAATTGCCTGTGGCTGTaGATACCACTGTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNINCLWL*IPLWRE
Trigger: CTCTCTCCACAGTGGTATCCACAGCCACAGGCAATT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR TCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACGTTCCACAGACCCTGTaGAGTTGCCCTTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHVPQTL*SCPCRS
Trigger: AGATCTACAAGGGCAACTTCACAGGGTCTGTGGAAC...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTAATATGGCCTTGGGATaGCTTGATGTCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALNMALG*LDVLHG
Trigger: TCCATGGAGGACATCAAGGCATCCCAAGGCCATATT...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR GCA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCTCTTCCCACTAAATTaGCCTATTTTAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSLFPLN*PILNLH
Trigger: ATGGAGATTTAAAATAGGGCAATTTAGTGGGAAGAG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR GCA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCATCATGGATGCAAAATaGCAAACACAATGCCTGACA +
Preference number: 4 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTIMDAK*QTQCLT
Trigger: TGTCAGGCATTGTGTTTGGCATTTTGCATCCATGAT...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCTTTCACTCTGCTCCTaGAGCTGGCATGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHLSLCS*SWHGET
Trigger: TGTTTCACCATGCCAGCTGCAGGAGCAGAGTGAAAG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGAATGTTAGGGGAATATaGCCTTGGGATGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQENVRGI*PWDALM
Trigger: CATCAAGGCATCCCAAGGCCATATTCCCCTAACATT...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CAA 72 bp ACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTaGCACTGTAACATTCAGCTTCTACAGGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TRALRITQRIVR*HCNIQLLQEVS
Trigger: ACTGACCTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
3UTR CAA 72 bp TTTAGCCCACATGATAACTGCCTGAGGAAGGCACTATaGCTCTTCCCATTTTCAGAACAGGTAACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FSPHDNCLRKAL*LFPFSEQVTEG
Trigger: ACCTTCAGTTACCTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGGGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTGGGTTGAAGAGTCTTTaGAGAGAGACAACAACCGAA +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNIGLKSL*RETTTE
Trigger: TTCGGTTGTTGTCTCTCTTCAAAGACTCTTCAACCC...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGTGCTTCTTTGTGGGTTaGAGAGTCTTTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RITQRIVRLHCNIQLLQECFFVG*RVFEER
Trigger: TCTCTCTTCAAAGACTCTTCAACCCACAAAGAAGCA...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATATTTCATTTACTTACTaGAAGCCAGCCTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNISFTY*KPAWLQ
Trigger: CTGTAGCCAGGCTGGCTTTCAGTAAGTAAATGAAAT...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGAATCAAAGTGACAGATaGCATCTTAGGCCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQNQSDR*HLRPSQ
Trigger: TTGACTAGGCCTAAGATGGCATCTGTCACTTTGATT...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGAGATGGTTCCTGGATaGCAAATGCCAGCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSEMVPG*QMPALR
Trigger: CCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCAGAGGTGTGGAGCTTaGATTTCGTCCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSQRCGA*ISSSLS
Trigger: GGACAGCGAGGACGAAATCCAAGCTCCACACCTCTG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGAATTAAAGAGATCATaGATGCAAAATGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLELKRS*MQNAKH
Trigger: GTGTTTGGCATTTTGCATCCATGATCTCTTTAATTC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTACCCCAATAAACATTTaGTCCTTGAAGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNITPINI*SLKKEG
Trigger: CCCTTCCTTCTTCAAGGATCAAATGTTTATTGGGGT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTACAACCGAACTCATGTaGAGGAGGTTCATACAACAT +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNITTELM*RRFIQH
Trigger: ATGTTGTATGAACCTCCTTCACATGAGTTCGGTTGT...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCCTAGGTTCAAATTGTaGCTCTGCCATGTATTCCAC +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHPRFKL*LCHVFH
Trigger: GTGGAATACATGGCAGAGTCACAATTTGAACCTAGG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTAGGCGATATCCATCTTaGTCAGGCAGATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSRRYPS*SGRWWL
Trigger: GAGCCACCATCTGCCTGAGCAAGATGGATATCGCCT...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTGTCTGGTAGAGCTGTaGGGTGCTGTCACCATGGTT +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSCLVEL*GAVTMV
Trigger: AACCATGGTGACAGCACCCCACAGCTCTACCAGACA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATCATTCACTATTTCAGTaGTCTCACCTTTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNHSLFQ*SHLSSK
Trigger: CTTGGATGAAAGGTGAGACCACTGAAATAGTGAATG...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATACATGTTCATGCTCCTaGCCTGATTATATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNTCSCS*PDYISL
Trigger: GAGAGAAATATAATCAGGCCAGGAGCATGAACATGT...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGCTGGCCTCTCAACCTaGAAAGGTCTCTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSAGLST*KGLCTR
Trigger: CCTTGTACAGAGACCTTTCCAGGTTGAGAGGCCAGC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGGCAGTTGCACAAGCTaGCACCTGTATAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSGSCTS*HLYRLR
Trigger: TCTCAGCCTATACAGGTGCCAGCTTGTGCAACTGCC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTCTGCTGCTTTTCACTaGTCATTCATTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNISAAFH*SFISAC
Trigger: ACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCACCTGGCCAGTCTATaGTCTTACCAGCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSHLASL*SYQLIP
Trigger: AGGAATCAGCTGGTAAGAGCATAGACTGGCCAGGTG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCACTCCATTTTCAGATaGAGCCCTGAGTACTGTATT +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHHSIFR*SPEYCI
Trigger: AATACAGTACTCAGGGCTCCATCTGAAAATGGAGTG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACTATATGACTATTGGGTaGCTCAAGGACAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QVLMIFKLISTILYCPEHYMTIG*LKDKAP
Trigger: TGGAGCTTTGTCCTTGAGCCACCCAATAGTCATATA...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTTAGTTGCTTCTTTGTaGGTTGAAGAGTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GTRALRITQRIVRLHCNILVASL*VEESLK
Trigger: CTTCAAAGACTCTTCAACCCACAAAGAAGCAACTAA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR TCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGTGCCTCTGATCTACTaGGCAGTTATAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSVPLIY*AVISKQ
Trigger: CTGTTTGCTTATAACTGCTCAGTAGATCAGAGGCAC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR GCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTCCCCTCACATGTTCATaGTCCTGGCCTGATTATATT +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSPLTCS*SWPDYI
Trigger: AATATAATCAGGCCAGGAGCATGAACATGTGAGGGG...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTACTTCAAATTGTCCCTaGTGCACAGTAGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSTSNCP*CTVGAE
Trigger: TTCAGCACCTACTGTGCACCAGGGACAATTTGAAGT...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CCA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTGGAGGAGTTCTAGCTaGTGTGACAGAAGCCATAAA +
Preference number: 4 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSWRSSS*CDRSHK
Trigger: TTTATGGCTTCTGTCACACCAGCTAGAACTCCTCCA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGAGGCACTGGGGCAGCTaGTGGACTGACAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQRHWGS*WTDRGT
Trigger: GGTGCCCCTGTCAGTCCACAAGCTGCCCCAGTGCCT...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS GCA 90 bp CTGGTGGCCCCCGGTGGCTTTGTCAGCAGGATGGTGGGGGCAGCCTaGCCTCGAGGGCGGCCCTCTGGCTTGGAGGATGTGGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: LVAPGGFVSRMVGAA*PRGRPSGLEDVVAM
Trigger: CATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGAGGGCAGGCTGCCCCCACCATCCTGCTGACAAAGCCACCGGGGGCCACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512662.5
ENST00000515826.1
CDS CCA 90 bp CCTGCCCTCGAGGGCGGCCCTCTGGCTTGGAGGATGTGGTTGCCATaGCTGCTGGAGCGGGCCCTGTGGACAGGGAGCTTTCAGAATGGG +
Preference number: 5 (lower is better)
Translates to: PALEGGPLAWRMWLP*LLERALWTGSFQNG
Trigger: CCCATTCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGAGGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 90 bp GCGGTTACTGTCGCAGCGATGGTGGAGATGGTGTGCGTAGGAGGGTaGCCCTCTGCACGGGGTGTCGGTGTTGCCATGGGAGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: AVTVAAMVEMVCVGG*PSARGVGVAMGAAA
Trigger: GGCTGCAGCTCCCATGGCAACACCGACACCCCGTGCAGAGGGGCACCCTCCTACGCACACCATCTCCACCATCGCTGCGACAGTAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS-3UTR CAA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGTGGCCTTGGGATGCCTaGATGTCCTCCATGGATTCC +
Preference number: 5 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQWPWDA*MSSMDS
Trigger: GGAATCCATGGAGGACATCAAGGCATCCCAAGGCCA...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS CCA 90 bp TGCGAAGGCCTGGCTTGTCCTTTGCAGGCCCCAGGGAGGTGGTGGTaGGTGCCCATGAGGTATTGCTGGGCACTGTGGTCGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: CEGLACPLQAPGRWW*VPMRYCWALWSQPL
Trigger: CAGTGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCACCTCCCTGGGGCCTGCAAAGGACAAGCCAGGCCTTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CCA 90 bp CTCTGCGAAGGCCTGGCTTGTCCTTTGCAGGCCCCAGGGAGGTGGTaGTGGGTGCCCATGAGGTATTGCTGGGCACTGTGGTCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LCEGLACPLQAPGRW*WVPMRYCWALWSQP
Trigger: TGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCACCTCCCTGGGGCCTGCAAAGGACAAGCCAGGCCTTCGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS-3UTR CAA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTCACGGGGTGTCGGTGTaGCCATGGGAGCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGHGVSV*PWELQP
Trigger: AGGCTGCAGCTCCCATGGCAACACCGACACCCCGTG...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp CGTGCTGGACACAGCACGGGGAGGCAGCCAGCCGGCCGGGAACAAGGGGAGCAGGCCACAGTCTCCTCCTaGGCTCCAGAAATAGTGCTT +
Preference number: 5 (lower is better)
Translates to: RAGHSTGRQPAGREQGEQATVSS*APEIVL
Trigger: AAGCACTATTTCTGGAGCCAAGGAGGAGACTGTGGC...CTGCTCCCCTTGTTCCCGGCCGGCTGGCTGCCTCCCCGTGCTGTGTCCAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTGGGGGTCCATCGGGATaGGGGGTCAGCATCACCACA +
Preference number: 5 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGGGPSG*GVSITT
Trigger: TGTGGTGATGCTGACCCCCAATCCCGATGGACCCCC...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGGCTCTGTGCTGCGGTTaGTCCCCCTCGGCCACATGG +
Preference number: 5 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLALCCG*SPSATW
Trigger: CCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGC...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGGAGGGTCTGACGTTGTaGGCCGTGCTGGACACAGCA +
Preference number: 5 (lower is better)
Translates to: REAATSGSPLGVSEGLTLEGLTL*AVLDTA
Trigger: TGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTC...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAGGGCGGCCCTCTGGCTaGGAGGATGTGGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIGRPSG*EDVVAM
Trigger: CATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCC...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCCCTGGAGGGATGGGTaGGAGCTTGTGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKPWRDG*ELVGLW
Trigger: CCACAACCCCACAAGCTCCAACCCATCCCTCCAGGG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CAGTGGAAGCTGAGAGCTGGATGGCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTCTGAGGGTCTGACGTaGTTGGCCGTGCTGGACACA +
Preference number: 5 (lower is better)
Translates to: QWKLRAGWQVHRLVLRAGSEGLT*LAVLDT
Trigger: TGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGA...ACCTGCTCGCAGCACCAGCCGGTGGACTTGCCATCCAGCTCTCAGCTTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS TCA 90 bp GGTAGAGCTGTGGGGTGCTGTCACCATGGTTCCCGGGGGAGTGCCTaGAGGGAGGACCTGAAGAGATTCCCTGGGAGATGGTTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: GRAVGCCHHGSRGSA*REDLKRFPGRWFLD
Trigger: ATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTCCCTTCAGGCACTCCCCCGGGAACCATGGTGACAGCACCCCACAGCTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS TCA 90 bp TGCAGCACACCGTCAGCAGGACAGAGCAGGAGGAGATGGGCACGCTaGTGGCCAGGATCACCCAGGCGATATCCATCTTGCTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CSTPSAGQSRRRWAR*WPGSPRRYPSCSGR
Trigger: TCTGCCTGAGCAAGATGGATATCGCCTGGGTGATCCTGGCCATCAGCGTGCCCATCTCCTCCTGCTCTGTCCTGCTGACGGTGTGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
CDS GCA 90 bp ACCCAGGCGATATCCATCTTGCTCAGGCAGATGGTGGCTCTGTGCTaGGGTTTGTCCCCCTCGGCCACATGGGAGATGTTCCCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TQAISILLRQMVALC*GLSPSATWEMFPAV
Trigger: GACAGCAGGGAACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGCCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CCA 90 bp TGGTTCCCGGGGGAGTGCCTGAAGGGAGGACCTGAAGAGATTCCCTaGGAGATGGTTCCTGGATGGCAAATGCCAGCGCTTCGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: WFPGECLKGGPEEIP*EMVPGWQMPALRSV
Trigger: CACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTCCCTTCAGGCACTCCCCCGGGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 90 bp GGATTGGGGGTCAGCATCACCACAGAAGTATGTCTGGTAGAGCTGTaGGGTGCTGTCACCATGGTTCCCGGGGGAGTGCCTGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GLGVSITTEVCLVEL*GAVTMVPGGVPEGR
Trigger: CCTCCCTTCAGGCACTCCCCCGGGAACCATGGTGACAGCACCCCACAGCTCTACCAGACATACTTCTGTGGTGATGCTGACCCCCAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 90 bp TGGCCAGGATCACCCAGGCGATATCCATCTTGCTCAGGCAGATGGTaGCTCTGTGCTGCGGTTTGTCCCCCTCGGCCACATGGGAGATGT +
Preference number: 5 (lower is better)
Translates to: WPGSPRRYPSCSGRW*LCAAVCPPRPHGRC
Trigger: ACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGCCTGGGTGATCCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGCTGCGAAGGCCTGGCTaGTCCTTTGCAGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGLRRPG*SFAGPR
Trigger: CCTGGGGCCTGCAAAGGACAAGCCAGGCCTTCGCAG...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGGGATGGGTTGGAGCTaGTGGGGTTGTGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKGMGWS*WGCGCS
Trigger: GGAGCATCCACAACCCCACAAGCTCCAACCCATCCC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGCTCTGTGCTGCGGTTaGTCCCCCTCGGCCACATGG +
Preference number: 5 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIALCCG*SPSATW
Trigger: CCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAACCTCTGGAAGCCCCTaGGGCGTCTCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ASPPAGAASRFAVPSRSITSGSP*GVSEGL
Trigger: CAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS GCA 90 bp ATCACCCAGGCGATATCCATCTTGCTCAGGCAGATGGTGGCTCTGTaGTGCGGTTTGTCCCCCTCGGCCACATGGGAGATGTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: ITQAISILLRQMVAL*CGLSPSATWEMFPA
Trigger: AGCAGGGAACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGCCTGGGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 90 bp AGCTCAGGTTGTTCTCCGGGTTGGCGGTCTTCTTCTTCCTCTTCATaGAGCACACCGTCAGCAGGACAGAGCAGGAGGAGATGGGCACGC +
Preference number: 5 (lower is better)
Translates to: SSGCSPGWRSSSSSS*STPSAGQSRRRWAR
Trigger: GCGTGCCCATCTCCTCCTGCTCTGTCCTGCTGACGGTGTGCTGCATGAAGAGGAAGAAGAAGACCGCCAACCCGGAGAACAACCTGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
CDS-3UTR CAA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGCTTGGAGGATGTGGTaGCCATGGCTGCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIAWRMW*PWLLER
Trigger: CCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS TCA 90 bp GAGGGTGGCCACAGTCTCCTCCTTGGCTCCAGAAATAGTGCTTTCTaGGACCCTGGAGGGATGGGTTGGAGCTTGTGGGGTTGTGGATGC +
Preference number: 5 (lower is better)
Translates to: EGGHSLLLGSRNSAF*DPGGMGWSLWGCGC
Trigger: GCATCCACAACCCCACAAGCTCCAACCCATCCCTCCAGGGTCTCAGAAAGCACTATTTCTGGAGCCAAGGAGGAGACTGTGGCCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 90 bp CCTGGGAGATGGTTCCTGGATGGCAAATGCCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACCCCAGTTGAGTGCCATCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: PGRWFLDGKCQRFGQ*QDQQETPVECHLLP
Trigger: AGGGAGCAGATGGCACTCAACTGGGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS-3UTR CAA 90 bp TGGGTTCATGCCAGGGTGTGGGGCAGTTGCACAAGCTGGCACCTGTATAGGCTGATCTGGTGTCCCTCCTaGGCTGGTGAAGGTAGAACC +
Preference number: 5 (lower is better)
Translates to: WVHARVWGSCTSWHLYRLIWCPS*AGEGRT
Trigger: GGTTCTACCTTCACCAGCCAAGGAGGGACACCAGAT...CAGCCTATACAGGTGCCAGCTTGTGCAACTGCCCCACACCCTGGCATGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGCAGGCGATATCCATCTaGCTCAGGCAGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKQAISI*LRQMVA
Trigger: AGCCACCATCTGCCTGAGCAAGATGGATATCGCCTG...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGGAGGGTCTGACGTTGTaGGCCGTGCTGGACACAGCA +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGEGLTL*AVLDTA
Trigger: TGCTGTGTCCAGCACGGCCAACAACGTCAGACCCTC...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATATCTGAGGGTCTGACGTaGTTGGCCGTGCTGGACACA +
Preference number: 5 (lower is better)
Translates to: ASPPAGAASRFAVPSRSISEGLT*LAVLDT
Trigger: TGTGTCCAGCACGGCCAACAACGTCAGACCCTCAGA...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCTGGGCTCCACACAGCTaGACTGAGCACAGTGTGACA +
Preference number: 5 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSWAPHS*TEHSVT
Trigger: TGTCACACTGTGCTCAGTCAAGCTGTGTGGAGCCCA...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTCACGGGGTGTCGGTGTaGCCATGGGAGCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPHGVSV*PWELQP
Trigger: AGGCTGCAGCTCCCATGGCAACACCGACACCCCGTG...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CAGTCTATGCTCTTACCAGCTGATTCCTGCCTTAGATTGATGCAAAAGCCCACCTGGCCCCCGGTGGCTTaGTCAGCAGGATGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QSMLLPADSCLRLMQKPTWPPVA*SAGWWG
Trigger: CCCCCACCATCCTGCTGACAAAGCCACCGGGGGCCA...GGTGGGCTTTTGCATCAATCTAAGGCAGGAATCAGCTGGTAAGAGCATAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp GCAAGTCCACCGGCTGGTGCTGCGAGCAGGTTTGCAGTGCCAAGTAGGAGTATAATCTGGTGTCCCTCCTaGGCTGGTGAAGGTAGAACC +
Preference number: 5 (lower is better)
Translates to: ASPPAGAASRFAVPSRSIIWCPS*AGEGRT
Trigger: GGTTCTACCTTCACCAGCCAAGGAGGGACACCAGAT...TATACTCCTACTTGGCACTGCAAACCTGCTCGCAGCACCAGCCGGTGGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTACCTCTGGAAGCCCCTaGGGCGTCTCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSTSGSP*GVSEGL
Trigger: CAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGGGCCAGCACCGGGGGTaGGCAGAGGGCCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQGQHRG*AEGQLC
Trigger: ACAGAGCTGGCCCTCTGCCAACCCCCGGTGCTGGCC...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS GCA 90 bp GAGGACCTGAAGAGATTCCCTGGGAGATGGTTCCTGGATGGCAAATaGCAGCGCTTCGGTCAGTGCCAAGATCAGCAGGAAACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: EDLKRFPGRWFLDGK*QRFGQCQDQQETPV
Trigger: AACTGGGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS CCA 90 bp CTGAAGGGAGGACCTGAAGAGATTCCCTGGGAGATGGTTCCTGGATaGCAAATGCCAGCGCTTCGGTCAGTGCCAAGATCAGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LKGGPEEIPWEMVPG*QMPALRSVPRSAGN
Trigger: GTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTCCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS-3UTR CAA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGGGGGTCCATCGGGATaGGGGGTCAGCATCACCACA +
Preference number: 5 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLGGPSG*GVSITT
Trigger: TGTGGTGATGCTGACCCCCAATCCCGATGGACCCCC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTGGTGCCCATGAGGTATaGCTGGGCACTGTGGTCGCA +
Preference number: 5 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSGAHEV*LGTVVA
Trigger: TGCGACCACAGTGCCCAGCAATACCTCATGGGCACC...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGAGGCGGTTGAGGAAATaGCCTGTGGCTGTGGATACC +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGRRLRK*PVAVDT
Trigger: GGTATCCACAGCCACAGGCAATTTCCTCAACCGCCT...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGTGGCCTTGGGATGCCTaGATGTCCTCCATGGATTCC +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGWPWDA*MSSMDS
Trigger: GGAATCCATGGAGGACATCAAGGCATCCCAAGGCCA...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCGTGCTGCGAGCAGGTTaGCAGTGCCAAGTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIVLRAG*QCQVGV
Trigger: TACTCCTACTTGGCACTGCAAACCTGCTCGCAGCAC...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGGTGCTGCGAGCAGGTTaGCAGTGCCAAGTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGVLRAG*QCQVGV
Trigger: TACTCCTACTTGGCACTGCAAACCTGCTCGCAGCAC...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS GCA 90 bp CAGCGCTTCGGTCAGTGCCAAGATCAGCAGGAAACCCCAGTTGAGTaGCATCTGCTCCCTGTGGGGATCCTGACTGACATGATTGGTATA +
Preference number: 5 (lower is better)
Translates to: QRFGQCQDQQETPVE*HLLPVGILTDMIGI
Trigger: TATACCAATCATGTCAGTCAGGATCCCCACAGGGAGCAGATGGCACTCAACTGGGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS-3UTR CAA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGTGGCCCCCGGTGGCTTaGTCAGCAGGATGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEWPPVA*SAGWWG
Trigger: CCCCCACCATCCTGCTGACAAAGCCACCGGGGGCCA...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGCCCTGGAGGGATGGGTaGGAGCTTGTGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQPWRDG*ELVGLW
Trigger: CCACAACCCCACAAGCTCCAACCCATCCCTCCAGGG...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCTTCCAGCTGCCAGCCTaGCTGGCCTCTCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLFQLPA*LASQPG
Trigger: TCCAGGTTGAGAGGCCAGCAAGGCTGGCAGCTGGAA...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS TCA 90 bp TCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTTGGATaGCCACCAATCTATCACCAACTCGGGAGAAGCGCTCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SALLLFTAHSFLHVG*PPIYHQLGRSAPAP
Trigger: GGGAGCCGGAGCGCTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000514529.5
ENST00000514894.5
CDS GCA 90 bp CCTGGGAGATGGTTCCTGGATGGCAAATGCCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACCTTGAAAAGGAGACAGAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PGRWFLDGKCQRFGQ*QDQQETLKRRQREE
Trigger: CTCTTCTCTCTGTCTCCTTTTCAAGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511388.1
CDS GCA 90 bp GAGGACCTGAAGAGATTCCCTGGGAGATGGTTCCTGGATGGCAAATaGCAGCGCTTCGGTCAGTGCCAAGATCAGCAGGAAACCTTGAAA +
Preference number: 5 (lower is better)
Translates to: EDLKRFPGRWFLDGK*QRFGQCQDQQETLK
Trigger: TTTCAAGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511388.1
CDS GCA 90 bp AGCTCAGGTTGTTCTCCGGGTTGGCGGTCTTCTTCTTCCTCTTCATaGAGCACACCGTCAGCAGGACAGTTAACAGTTGGCAATAGAGGG +
Preference number: 5 (lower is better)
Translates to: SSGCSPGWRSSSSSS*STPSAGQLTVGNRG
Trigger: CCCTCTATTGCCAACTGTTAACTGTCCTGCTGACGGTGTGCTGCATGAAGAGGAAGAAGAAGACCGCCAACCCGGAGAACAACCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS CCA 90 bp CCCATCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTTaGATGACCACCAATCTATCACCAACTCGGGAGAAGCGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PIGSAAFHCSFISAC*MTTNLSPTREKRSG
Trigger: GCCGGAGCGCTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000514529.5
ENST00000514894.5
CDS-3UTR CAA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGGCTTGGAGGATGTGGTaGCCATGGCTGCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQAWRMW*PWLLER
Trigger: CCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGC...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTCCAGAGGTGTGGAGCTaGGATTTCGTCCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPPEVWS*DFVLAV
Trigger: GACAGCGAGGACGAAATCCAAGCTCCACACCTCTGG...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AAAGTGACAGATGCCATCTTAGGCCTAGTCAATAGGGCAAAAGGGACATCGAATAGGCACTGGGGCAGCTaGTGGACTGACAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: KVTDAILGLVNRAKGTSNRHWGS*WTDRGT
Trigger: GGTGCCCCTGTCAGTCCACAAGCTGCCCCAGTGCCT...ATTCGATGTCCCTTTTGCCCTATTGACTAGGCCTAAGATGGCATCTGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGGGGATGGGTTGGAGCTaGTGGGGTTGTGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQGMGWS*WGCGCS
Trigger: GGAGCATCCACAACCCCACAAGCTCCAACCCATCCC...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCAGGCGATATCCATCTaGCTCAGGCAGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSQAISI*LRQMVA
Trigger: AGCCACCATCTGCCTGAGCAAGATGGATATCGCCTG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp GGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCCAAGAAGGTTGTTCTCCGGGTaGGCGGTCTTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GKHFKAPGPGSASKPSPRRLFSG*AVFFFL
Trigger: GAGGAAGAAGAAGACCGCCAACCCGGAGAACAACCT...TCTTGGAGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCTGAGGAAGGCACTATaGCTCTTCCCATTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PAGRPGSQNRKFCSTLSSLRKAL*LFPFSE
Trigger: TTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAG...GGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGGTGACAGAGGCCTCTaGGGGAGAAGCCATGAAGTG +
Preference number: 5 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLGDRGL*GRSHEV
Trigger: CACTTCATGGCTTCTCCCCAAGAGGCCTCTGTCACC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGCCAGAGGTGTGGAGCTaGGATTTCGTCCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQPEVWS*DFVLAV
Trigger: GACAGCGAGGACGAAATCCAAGCTCCACACCTCTGG...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTAGGCGGTTGAGGAAATaGCCTGTGGCTGTGGATACC +
Preference number: 5 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPRRLRK*PVAVDT
Trigger: GGTATCCACAGCCACAGGCAATTTCCTCAACCGCCT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGAGAAGCGGCCACCTCTGGAAGCCCCTTGGGCGTCTCTGAGGGTCTGACGTTGTCTCTTCCCACTAAATaGCCCTATTTTAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: REAATSGSPLGVSEGLTLSLPTK*PYFKSP
Trigger: TGGAGATTTAAAATAGGGCAATTTAGTGGGAAGAGA...CAACGTCAGACCCTCAGAGACGCCCAAGGGGCTTCCAGAGGTGGCCGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CAA 90 bp TGCCAGATGCAGAGATCCTGCCCTGCGGGAAGGCCTGGGAGTCAGAACAGAAAGGTACTGTATTCACATTaGTGGAAGGGCATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: CQMQRSCPAGRPGSQNRKVLYSH*WKGMLS
Trigger: TGAAAGCATGCCCTTCCACAAATGTGAATACAGTAC...CTTTCTGTTCTGACTCCCAGGCCTTCCCGCAGGGCAGGATCTCTGCATCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS GCA 90 bp TTCAGATGGAGCCCTGAGTACTGTATTCACATTTGTGGAAGGGCATaGTTTCAGGTGATAGGATCTGAGCAGGAGGAGATGGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: FRWSPEYCIHICGRA*FQVIGSEQEEMGTL
Trigger: CAGCGTGCCCATCTCCTCCTGCTCAGATCCTATCACCTGAAAGCATGCCCTTCCACAAATGTGAATACAGTACTCAGGGCTCCATCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACCTGCGAAGGCCTGGCTaGTCCTTTGCAGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QVLMIFKLISTILYCPEHLRRPG*SFAGPR
Trigger: CCTGGGGCCTGCAAAGGACAAGCCAGGCCTTCGCAG...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CCACGCTGTCTTCCCCTCACATGTTCATGCTCCTGGCCTGATTATATTTCTCTCGCCACAGTCTCCTCCTaGGCTCCAGAAATAGTGCTT +
Preference number: 5 (lower is better)
Translates to: PRCLPLTCSCSWPDYISLATVSS*APEIVL
Trigger: AAGCACTATTTCTGGAGCCAAGGAGGAGACTGTGGC...GAGAGAAATATAATCAGGCCAGGAGCATGAACATGTGAGGGGAAGACAGCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGCCTGCCATCCACAACTaGGATGGAATTAAACATGAC +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGPAIHN*DGIKHD
Trigger: GTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGG...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCTGCCTCTGCATGGCTaGCCTCCGCTCTACTGCCCA +
Preference number: 5 (lower is better)
Translates to: GTRALRITQRIVRLHCNILPLHG*PPLYCP
Trigger: TGGGCAGTAGAGCGGAGGCAAGCCATGCAGAGGCAG...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS GCA 90 bp CTCATGACCCATCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTaGATGTTGGATGACCACCAATCTATCACCAACTCGGGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: LMTHRLCCFSLLIHF*MLDDHQSITNSGEA
Trigger: CGCTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGATGGGTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS-3UTR CAA 90 bp CAGGTCTTGATGATCTTCAAGTTGATATCCACTATCCTGTATTGTCCTGAACACGGTGCCCATGAGGTATaGCTGGGCACTGTGGTCGCA +
Preference number: 5 (lower is better)
Translates to: QVLMIFKLISTILYCPEHGAHEV*LGTVVA
Trigger: TGCGACCACAGTGCCCAGCAATACCTCATGGGCACC...GTGTTCAGGACAATACAGGATAGTGGATATCAACTTGAAGATCATCAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGAGGTTGTTCTCCGGGTaGGCGGTCTTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RITQRIVRLHCNIQLLQERLFSG*AVFFFL
Trigger: GAGGAAGAAGAAGACCGCCAACCCGGAGAACAACCT...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CTGAGGCGGTCCAGTTCCCTTTACAGGTGTGCGTATGAGAAGGGAGGAAATGGGCATTTAGTTGCTTCTTaGTGGGTTGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LRRSSSLYRCAYEKGGNGHLVAS*WVEESL
Trigger: CAAAGACTCTTCAACCCACAAAGAAGCAACTAAATG...CCCATTTCCTCCCTTCTCATACGCACACCTGTAAAGGGAACTGGACCGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CAGCTTCTACAGGAGGTCAGTCTCTTACCTCACCTGACCAGGGTTCCTGGGATCCATTTAGTTGCTTCTTaGTGGGTTGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QLLQEVSLLPHLTRVPGIHLVAS*WVEESL
Trigger: CAAAGACTCTTCAACCCACAAAGAAGCAACTAAATG...GATCCCAGGAACCCTGGTCAGGTGAGGTAAGAGACTGACCTCCTGTAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTAGCTCCAGCTCAGTTTaGGTAGAGTTAGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPSSSSV*VELELE
Trigger: CTCTAGCTCTAACTCTACCAAAACTGAGCTGGAGCT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGGGCGGCCCTCTGGCTaGGAGGATGTGGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSGRPSG*EDVVAM
Trigger: CATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp GGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTTTGGAGCTTGTGGGGTaGTGGATGCTCCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GTRALRITQRIVRLHCNILELVG*WMLPEE
Trigger: TTCCTCAGGGAGCATCCACAACCCCACAAGCTCCAA...AATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTCACAAACAGTGTTTCTaGACAGAAGGGGTTAACAAG +
Preference number: 5 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSHKQCF*TEGVNK
Trigger: CTTGTTAACCCCTTCTGTCAAGAAACACTGTTTGTG...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp CCACATGATAACTGCCTGAGGAAGGCACTATTGCTCTTCCCATTTTCAGAACAGGATTCCTGCCTTAGATaGATGCAAAAGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: PHDNCLRKALLLFPFSEQDSCLR*MQKPTC
Trigger: GCAGGTGGGCTTTTGCATCAATCTAAGGCAGGAATC...CTGTTCTGAAAATGGGAAGAGCAATAGTGCCTTCCTCAGGCAGTTATCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS TCA 90 bp TACTTCGGAGGATTGTGTTTATCAGGATGTCACACCACCATAAGTTaGAAAGCATCCTGGAGTAGAGGGTGTGGAAGCCTTCAAACGCAC +
Preference number: 5 (lower is better)
Translates to: YFGGLCLSGCHTTIS*KASWSRGCGSLQTH
Trigger: GTGCGTTTGAAGGCTTCCACACCCTCTACTCCAGGATGCTTTTCAACTTATGGTGGTGTGACATCCTGATAAACACAATCCTCCGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514529.5
CDS GCA 90 bp CTCATGACCCATCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTaGATGTTGGATGACCACCAATCTATCACCAACAGCTACTGTTCA +
Preference number: 5 (lower is better)
Translates to: LMTHRLCCFSLLIHF*MLDDHQSITNSYCS
Trigger: TGAACAGTAGCTGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGATGGGTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512137.5
CDS CCA 90 bp TGTCAGATGTGTGACAGGAAGAAGAGGGGTCACTCCATTTTCAGATaGAGCCCTGAGTACTGTATTCACATTTGTGGAAGGGCATGCTTT +
Preference number: 5 (lower is better)
Translates to: CQMCDRKKRGHSIFR*SPEYCIHICGRACF
Trigger: AAAGCATGCCCTTCCACAAATGTGAATACAGTACTCAGGGCTCCATCTGAAAATGGAGTGACCCCTCTTCTTCCTGTCACACATCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGGAAGGGCAAGCATTTTAAAGCTCCAGGGCCGGGATCTGCATCTAAACCCTCTATTCATTTCTGCATGTaGGATGACCACCAATCTATC +
Preference number: 5 (lower is better)
Translates to: RKGKHFKAPGPGSASKPSIHFCM*DDHQSI
Trigger: GATAGATTGGTGGTCATCCAACATGCAGAAATGAAT...AGAGGGTTTAGATGCAGATCCCGGCCCTGGAGCTTTAAAATGCTTGCCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321871.11
CDS-3UTR CAA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGCAAAGAATCGTGCGCTaGCACTGTAACATTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQQRIVR*HCNIQL
Trigger: AAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTG...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp TCAGAACAGAAAGTTCTGCTCCACGCTGTCTTCCCCTCACATGTTCATGCTCCTATCTGTGAGTCAGATTaGTATAGTTTGCACGCCTCT +
Preference number: 5 (lower is better)
Translates to: SEQKVLLHAVFPSHVHAPICESD*YSLHAS
Trigger: AGAGGCGTGCAAACTATACAAATCTGACTCACAGAT...AGGAGCATGAACATGTGAGGGGAAGACAGCGTGGAGCAGAACTTTCTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS TCA 90 bp CATGATTCTGTATTGTGTTTATCAGGATGTCACACCACCATAAGTTaGAAAGCATCCTGGAGTAGAGGGTGTGGAAGCCTTCAAACGCAC +
Preference number: 5 (lower is better)
Translates to: HDSVLCLSGCHTTIS*KASWSRGCGSLQTH
Trigger: GTGCGTTTGAAGGCTTCCACACCCTCTACTCCAGGATGCTTTTCAACTTATGGTGGTGTGACATCCTGATAAACACAATACAGAATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS-3UTR CAA 90 bp TTAAACATGACATCCAATGGTGCCGTCATAAGGCTCCAGGGTACTCATCCTCAGTTAGATCTCAGATACTaGATCGTTTCCCACAAACAG +
Preference number: 5 (lower is better)
Translates to: LNMTSNGAVIRLQGTHPQLDLRY*IVSHKQ
Trigger: CTGTTTGTGGGAAACGATCAAGTATCTGAGATCTAA...CTGAGGATGAGTACCCTGGAGCCTTATGACGGCACCATTGGATGTCATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS-3UTR CAA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGCCTGCCATCCACAACTaGGATGGAATTAAACATGAC +
Preference number: 5 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEPAIHN*DGIKHD
Trigger: GTCATGTTTAATTCCATCCAAGTTGTGGATGGCAGG...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS TCA 90 bp TCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTTGGATaGCCACCAATCTATCACCAACAGCTACTGTTCAGGTTTAAAAGT +
Preference number: 5 (lower is better)
Translates to: SALLLFTAHSFLHVG*PPIYHQQLLFRFKS
Trigger: ACTTTTAAACCTGAACAGTAGCTGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512137.5
CDS CCA 90 bp AGGGCCTTAACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATGATTCT +
Preference number: 5 (lower is better)
Translates to: RALTVGNRGPVNFSS*YHLVLLILQFIHDS
Trigger: AGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAAGGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514894.5
CDS-3UTR CAA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTTGGAGCTTGTGGGGTaGTGGATGCTCCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSLELVG*WMLPEE
Trigger: TTCCTCAGGGAGCATCCACAACCCCACAAGCTCCAA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AGAATCACTCAAAGAATCGTGCGCTTGCACTGTAACATTCAGCTTCTACAGGAGCACAAACAGTGTTTCTaGACAGAAGGGGTTAACAAG +
Preference number: 5 (lower is better)
Translates to: RITQRIVRLHCNIQLLQEHKQCF*TEGVNK
Trigger: CTTGTTAACCCCTTCTGTCAAGAAACACTGTTTGTG...CTCCTGTAGAAGCTGAATGTTACAGTGCAAGCGCACGATTCTTTGAGTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS CCA 90 bp GGAAACTTAACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATGATTCC +
Preference number: 5 (lower is better)
Translates to: GNLTVGNRGPVNFSS*YHLVLLILQFIHDS
Trigger: GGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAAGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393130.7
CDS CCA 90 bp GGACAGTTAACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATGATTCT +
Preference number: 5 (lower is better)
Translates to: GQLTVGNRGPVNFSS*YHLVLLILQFIHDS
Trigger: AGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAACTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS CCA 90 bp GGAAACTTAACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATGATTCT +
Preference number: 5 (lower is better)
Translates to: GNLTVGNRGPVNFSS*YHLVLLILQFIHDS
Trigger: AGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAAGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000510183.1
ENST00000511555.5
ENST00000512137.5
ENST00000515826.1
CDS-3UTR CAA 90 bp CACCAAATCAAGAGGAACCAGAGCTTTAAGAATCACTCAAAGAATCGTGCGCTTTTAGATCTCAGATACTaGATCGTTTCCCACAAACAG +
Preference number: 5 (lower is better)
Translates to: HQIKRNQSFKNHSKNRALLDLRY*IVSHKQ
Trigger: CTGTTTGTGGGAAACGATCAAGTATCTGAGATCTAA...AAGCGCACGATTCTTTGAGTGATTCTTAAAGCTCTGGTTCCTCTTGATTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321871.11
ENST00000508711.5
CDS TCA 90 bp CTCTTCATGGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATaGTTCTGTATTGTGTTTATCAGGATGTCACACCACCATAAGTTG +
Preference number: 5 (lower is better)
Translates to: LFMVSSGPAYPPVYS*FCIVFIRMSHHHKL
Trigger: CAACTTATGGTGGTGTGACATCCTGATAAACACAATACAGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS CCA 90 bp ATAACCTTAACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATTCATGATTCT +
Preference number: 5 (lower is better)
Translates to: ITLTVGNRGPVNFSS*YHLVLLILQFIHDS
Trigger: AGAATCATGAATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGTTAAGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS CCA 90 bp TCTAATTCATTTCAGAGTCTAGTTGGAATTCTCCCTGAGTTAATTTaGGATTGTAAATTCTCCAACGAGTCTCAGATCTTCAGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: SNSFQSLVGILPELI*DCKFSNESQIFRVA
Trigger: TGCTACTCTGAAGATCTGAGACTCGTTGGAGAATTTACAATCCCAAATTAACTCAGGGAGAATTCCAACTAGACTCTGAAATGAATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS-3UTR CAA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTGGAGTCCCAATTTCCTaGAGTTTTAAAACAGAGTTG +
Preference number: 5 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSGVPIS*SFKTEL
Trigger: CAACTCTGTTTTAAAACTCAAGGAAATTGGGACTCC...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS-3UTR CAA 90 bp AAAGGTCTCTGTACAAGGTTAGGAGATAGGGTAAGTTTCTACTTTATCTTATCTTCTCTTCCCACTAAATaGCCCTATTTTAAATCTCCA +
Preference number: 5 (lower is better)
Translates to: KGLCTRLGDRVSFYFILSSLPTK*PYFKSP
Trigger: TGGAGATTTAAAATAGGGCAATTTAGTGGGAAGAGA...AGATAAGATAAAGTAGAAACTTACCCTATCTCCTAACCTTGTACAGAGACCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515826.1
CDS CAA 72 bp GTGGGGGCAGCCTGCCCTCGAGGGCGGCCCTCTGGCTaGGAGGATGTGGTTGCCATGGCTGCTGGAGCGGGC +
Preference number: 6 (lower is better)
Translates to: VGAACPRGRPSG*EDVVAMAAGAG
Trigger: GCCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGAGGGCAGGCTGCCCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000515826.1
CDS CCA 72 bp GATGGTGGGGGCAGCCTGCCCTCGAGGGCGGCCCTCTaGCTTGGAGGATGTGGTTGCCATGGCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: DGGGSLPSRAAL*LGGCGCHGCWS
Trigger: GCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCCTCGAGGGCAGGCTGCCCCCACCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000515826.1
CDS CAA 72 bp GGCCCCAGGGAGGTGGTGGTGGGTGCCCATGAGGTATaGCTGGGCACTGTGGTCGCAGCCACTGTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GPREVVVGAHEV*LGTVVAATVWG
Trigger: GCCCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCACCTCCCTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 72 bp GCCCCAGGGAGGTGGTGGTGGGTGCCCATGAGGTATTaGTGGGCACTGTGGTCGCAGCCACTGTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: APGRWWWVPMRY*WALWSQPLSGA
Trigger: AGCCCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCACCTCCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CCA 72 bp GAGGGCGGCCCTCTGGCTTGGAGGATGTGGTTGCCATaGCTGCTGGAGCGGGCCCTGTGGACAGGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: EGGPLAWRMWLP*LLERALWTGSF
Trigger: AAAGCTCCCTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGCCGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 72 bp GATGGTGGAGATGGTGTGCGTAGGAGGGTGCCCCTCTaGACGGGGTGTCGGTGTTGCCATGGGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: DGGDGVRRRVPL*TGCRCCHGSCS
Trigger: GCTGCAGCTCCCATGGCAACACCGACACCCCGTGCAGAGGGGCACCCTCCTACGCACACCATCTCCACCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 72 bp GTCGCAGCGATGGTGGAGATGGTGTGCGTAGGAGGGTaGCCCTCTGCACGGGGTGTCGGTGTTGCCATGGGA +
Preference number: 6 (lower is better)
Translates to: VAAMVEMVCVGG*PSARGVGVAMG
Trigger: TCCCATGGCAACACCGACACCCCGTGCAGAGGGGCACCCTCCTACGCACACCATCTCCACCATCGCTGCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 72 bp GCGGCCCTCTGGCTTGGAGGATGTGGTTGCCATGGCTaGTGGAGCGGGCCCTGTGGACAGGGAGCTTTCAGA +
Preference number: 6 (lower is better)
Translates to: AALWLGGCGCHG*WSGPCGQGAFR
Trigger: TCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 72 bp CCAGGGAGGTGGTGGTGGGTGCCCATGAGGTATTGCTaGGCACTGTGGTCGCAGCCACTGTCTGGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PGRWWWVPMRYC*ALWSQPLSGAV
Trigger: CACAGCCCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCACCTCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 90 bp GTCCCAGGCTTCCAGGTCCCGGCGGGGACCAGGCGGTTGAGGAAATaGCCTGTGGCTGTGGATACCACTGTGGAGAGAGGACTGGGCACC +
Preference number: 6 (lower is better)
Translates to: VPGFQVPAGTRRLRK*PVAVDTTVERGLGT
Trigger: GGTGCCCAGTCCTCTCTCCACAGTGGTATCCACAGCCACAGGCAATTTCCTCAACCGCCTGGTCCCCGCCGGGACCTGGAAGCCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 72 bp AGCTGTGGGGTGCTGTCACCATGGTTCCCGGGGGAGTaGCTGAAGGGAGGACCTGAAGAGATTCCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SCGVLSPWFPGE*LKGGPEEIPWE
Trigger: CTCCCAGGGAATCTCTTCAGGTCCTCCCTTCAGGCACTCCCCCGGGAACCATGGTGACAGCACCCCACAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 72 bp GCCCTCTGGCTTGGAGGATGTGGTTGCCATGGCTGCTaGAGCGGGCCCTGTGGACAGGGAGCTTTCAGAATG +
Preference number: 6 (lower is better)
Translates to: ALWLGGCGCHGC*SGPCGQGAFRM
Trigger: CATTCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAGCAGCCATGGCAACCACATCCTCCAAGCCAGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 72 bp TGGTGGTGGGTGCCCATGAGGTATTGCTGGGCACTGTaGTCGCAGCCACTGTCTGGGGCTGTGGTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: WWWVPMRYCWAL*SQPLSGAVVKR
Trigger: CCTCTTCACCACAGCCCCAGACAGTGGCTGCGACCACAGTGCCCAGCAATACCTCATGGGCACCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CCA 72 bp AGTAAGCCAAGAGTCACTATGGCTGGGGCCATCCTGTaGGTCACCGTGGTGGGGGCGCTGAGAAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: SKPRVTMAGAIL*VTVVGALRRHW
Trigger: CCAGTGCCTTCTCAGCGCCCCCACCACGGTGACCCACAGGATGGCCCCAGCCATAGTGACTCTTGGCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 90 bp GCGATATCCATCTTGCTCAGGCAGATGGTGGCTCTGTGCTGCGGTTaGTCCCCCTCGGCCACATGGGAGATGTTCCCTGCTGTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: AISILLRQMVALCCG*SPSATWEMFPAVPG
Trigger: GCCTGGGACAGCAGGGAACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 90 bp GAGATGGGCACGCTGATGGCCAGGATCACCCAGGCGATATCCATCTaGCTCAGGCAGATGGTGGCTCTGTGCTGCGGTTTGTCCCCCTCG +
Preference number: 6 (lower is better)
Translates to: EMGTLMARITQAISI*LRQMVALCCGLSPS
Trigger: CGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGCCTGGGTGATCCTGGCCATCAGCGTGCCCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 72 bp TTCCAGGTCCCGGCGGGGACCAGGCGGTTGAGGAAATaGCCTGTGGCTGTGGATACCACTGTGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: FQVPAGTRRLRK*PVAVDTTVERG
Trigger: TCCTCTCTCCACAGTGGTATCCACAGCCACAGGCAATTTCCTCAACCGCCTGGTCCCCGCCGGGACCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 90 bp CTGGGCACCCGGTCGGTCATGGTGAGGGTGGCCACAGTCTCCTCCTaGGCTCCAGAAATAGTGCTTTCTGAGACCCTGGAGGGATGGGTT +
Preference number: 6 (lower is better)
Translates to: LGTRSVMVRVATVSS*APEIVLSETLEGWV
Trigger: AACCCATCCCTCCAGGGTCTCAGAAAGCACTATTTCTGGAGCCAAGGAGGAGACTGTGGCCACCCTCACCATGACCGACCGGGTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 72 bp GCGATATCCATCTTGCTCAGGCAGATGGTGGCTCTGTaGTGCGGTTTGTCCCCCTCGGCCACATGGGAGATG +
Preference number: 6 (lower is better)
Translates to: AISILLRQMVAL*CGLSPSATWEM
Trigger: CATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CCA 72 bp TCACCCAGGCGATATCCATCTTGCTCAGGCAGATGGTaGCTCTGTGCTGCGGTTTGTCCCCCTCGGCCACAT +
Preference number: 6 (lower is better)
Translates to: SPRRYPSCSGRW*LCAAVCPPRPH
Trigger: ATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATATCGCCTGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 72 bp ATCTTGCTCAGGCAGATGGTGGCTCTGTGCTGCGGTTaGTCCCCCTCGGCCACATGGGAGATGTTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: ILLRQMVALCCG*SPSATWEMFPA
Trigger: AGCAGGGAACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS CAA 90 bp TTCTCGTGGCATCTAGGGTCTCATCTGCTCCTGCCTCTGCATGGCTaGCCTCCGCTCTACTGCCCACTCTGGGTTCCCATTCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: FSWHLGSHLLLPLHG*PPLYCPLWVPIPEQ
Trigger: CTGCTCAGGAATGGGAACCCAGAGTGGGCAGTAGAGCGGAGGCAAGCCATGCAGAGGCAGGAGCAGATGAGACCCTAGATGCCACGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS CCA 72 bp GGGGAGTGCCTGAAGGGAGGACCTGAAGAGATTCCCTaGGAGATGGTTCCTGGATGGCAAATGCCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: GECLKGGPEEIP*EMVPGWQMPAL
Trigger: AAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTTCAGGTCCTCCCTTCAGGCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 72 bp GTCAGCATCACCACAGAAGTATGTCTGGTAGAGCTGTaGGGTGCTGTCACCATGGTTCCCGGGGGAGTGCCT +
Preference number: 6 (lower is better)
Translates to: VSITTEVCLVEL*GAVTMVPGGVP
Trigger: AGGCACTCCCCCGGGAACCATGGTGACAGCACCCCACAGCTCTACCAGACATACTTCTGTGGTGATGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 72 bp ATATCCATCTTGCTCAGGCAGATGGTGGCTCTGTGCTaGGGTTTGTCCCCCTCGGCCACATGGGAGATGTTC +
Preference number: 6 (lower is better)
Translates to: ISILLRQMVALC*GLSPSATWEMF
Trigger: GAACATCTCCCATGTGGCCGAGGGGGACAAACCGCAGCACAGAGCCACCATCTGCCTGAGCAAGATGGATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 72 bp TGTTCTCCGGGTTGGCGGTCTTCTTCTTCCTCTTCATaGAGCACACCGTCAGCAGGACAGAGCAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: CSPGWRSSSSSS*STPSAGQSRRR
Trigger: TCTCCTCCTGCTCTGTCCTGCTGACGGTGTGCTGCATGAAGAGGAAGAAGAAGACCGCCAACCCGGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
CDS GCA 72 bp GGTCAGTGCCAAGATCAGCAGGAAACCCCAGTTGAGTaGCATCTGCTCCCTGTGGGGATCCTGACTGACATG +
Preference number: 6 (lower is better)
Translates to: GQCQDQQETPVE*HLLPVGILTDM
Trigger: CATGTCAGTCAGGATCCCCACAGGGAGCAGATGGCACTCAACTGGGGTTTCCTGCTGATCTTGGCACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS TCA 72 bp CACAGTCTCCTCCTTGGCTCCAGAAATAGTGCTTTCTaGGACCCTGGAGGGATGGGTTGGAGCTTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: HSLLLGSRNSAF*DPGGMGWSLWG
Trigger: ACCCCACAAGCTCCAACCCATCCCTCCAGGGTCTCAGAAAGCACTATTTCTGGAGCCAAGGAGGAGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000511388.1
ENST00000515826.1
CDS GCA 72 bp TGGTTCCTGGATGGCAAATGCCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACCCCAGTTGAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: WFLDGKCQRFGQ*QDQQETPVECH
Trigger: ATGGCACTCAACTGGGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512662.5
CDS GCA 72 bp AAGAGATTCCCTGGGAGATGGTTCCTGGATGGCAAATaGCAGCGCTTCGGTCAGTGCCAAGATCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: KRFPGRWFLDGK*QRFGQCQDQQE
Trigger: TTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCATCTCCCAGGGAATCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000510183.1
ENST00000511388.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS GCA 72 bp TGTTCTCCGGGTTGGCGGTCTTCTTCTTCCTCTTCATaGAGCACACCGTCAGCAGGACAGTTAACAGTTGGC +
Preference number: 6 (lower is better)
Translates to: CSPGWRSSSSSS*STPSAGQLTVG
Trigger: GCCAACTGTTAACTGTCCTGCTGACGGTGTGCTGCATGAAGAGGAAGAAGAAGACCGCCAACCCGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS GCA 72 bp TGGTTCCTGGATGGCAAATGCCAGCGCTTCGGTCAGTaGCAAGATCAGCAGGAAACCTTGAAAAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: WFLDGKCQRFGQ*QDQQETLKRRQ
Trigger: CTGTCTCCTTTTCAAGGTTTCCTGCTGATCTTGGCACTGACCGAAGCGCTGGCATTTGCCATCCAGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511388.1
CDS CAA 90 bp ACCCATCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTaGGATGACCACCAATCTATCACCAACTCGGGAGAAGCGCTCCGG +
Preference number: 6 (lower is better)
Translates to: THRLCCFSLLIHFCM*DDHQSITNSGEALR
Trigger: CCGGAGCGCTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS TCA 72 bp AGGGTGTGGAAGCCTTCAAACGCACTTACATCCTCATaGCCCATCGGCTCTGCTGCTTTTCACTGCTCATTC +
Preference number: 6 (lower is better)
Translates to: RVWKPSNALTSS*PIGSAAFHCSF
Trigger: GAATGAGCAGTGAAAAGCAGCAGAGCCGATGGGTCATGAGGATGTAAGTGCGTTTGAAGGCTTCCACACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512137.5
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS TCA 72 bp CTGCTTTTCACTGCTCATTCATTTCTGCATGTTGGATaGCCACCAATCTATCACCAACTCGGGAGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: LLFTAHSFLHVG*PPIYHQLGRSA
Trigger: AGCGCTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS GCA 72 bp CATCGGCTCTGCTGCTTTTCACTGCTCATTCATTTCTaGATGTTGGATGACCACCAATCTATCACCAACTCG +
Preference number: 6 (lower is better)
Translates to: HRLCCFSLLIHF*MLDDHQSITNS
Trigger: CGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAGCCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS CCA 72 bp TCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTTaGATGACCACCAATCTATCACCAACTCGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SAAFHCSFISAC*MTTNLSPTREK
Trigger: CTTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS CAA 72 bp CTCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTaGGATGACCACCAATCTATCACCAACTCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LCCFSLLIHFCM*DDHQSITNSGE
Trigger: TTCTCCCGAGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000512662.5
ENST00000514529.5
ENST00000514894.5
CDS CAA 72 bp CTCAGATACTTGATCGTTTCCCACAAACAGTGTTTCTaGACAGAAGGGGTTAACAAGGACCATCCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: LRYLIVSHKQCF*TEGVNKDHPSV
Trigger: GACACTGGGATGGTCCTTGTTAACCCCTTCTGTCAAGAAACACTGTTTGTGGGAAACGATCAAGTATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000508711.5
ENST00000511388.1
CDS TCA 72 bp CTGCTTTTCACTGCTCATTCATTTCTGCATGTTGGATaGCCACCAATCTATCACCAACAGCTACTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LLFTAHSFLHVG*PPIYHQQLLFR
Trigger: CCTGAACAGTAGCTGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512137.5
CDS CCA 72 bp ACAGTTGGCAATAGAGGGCCTGTAAACTTCTCTTCATaGTATCATCTGGTCCTGCTTATCCTCCAGTTTATT +
Preference number: 6 (lower is better)
Translates to: TVGNRGPVNFSS*YHLVLLILQFI
Trigger: AATAAACTGGAGGATAAGCAGGACCAGATGATACCATGAAGAGAAGTTTACAGGCCCTCTATTGCCAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321871.11
ENST00000393130.7
ENST00000508711.5
ENST00000510183.1
ENST00000511555.5
ENST00000512137.5
ENST00000512662.5
ENST00000514894.5
ENST00000515826.1
CDS CCA 72 bp TCTGCTGCTTTTCACTGCTCATTCATTTCTGCATGTTaGATGACCACCAATCTATCACCAACAGCTACTGTT +
Preference number: 6 (lower is better)
Translates to: SAAFHCSFISAC*MTTNLSPTATV
Trigger: AACAGTAGCTGTTGGTGATAGATTGGTGGTCATCCAACATGCAGAAATGAATGAGCAGTGAAAAGCAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512137.5
CDS TCA 72 bp TTCTTCTCCTCCTATCTGGTATTCTTTGATACACTCTaGCAGCTTGTTCAAACTGAGGAGCCTAAGAAGGAT +
Preference number: 6 (lower is better)
Translates to: FFSSYLVFFDTL*QLVQTEEPKKD
Trigger: ATCCTTCTTAGGCTCCTCAGTTTGAACAAGCTGTCAGAGTGTATCAAAGAATACCAGATAGGAGGAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514529.5
CDS CCA 72 bp TTTCAGAGTCTAGTTGGAATTCTCCCTGAGTTAATTTaGGATTGTAAATTCTCCAACGAGTCTCAGATCTTC +
Preference number: 6 (lower is better)
Translates to: FQSLVGILPELI*DCKFSNESQIF
Trigger: GAAGATCTGAGACTCGTTGGAGAATTTACAATCCCAAATTAACTCAGGGAGAATTCCAACTAGACTCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508711.5
CDS GCA 72 bp ATTATTGAAGAGAGAATCAGGGTTCTGTCAGATGACTaGAGCCAACTACATCTGGATTTATTTTTAAATGAG +
Preference number: 6 (lower is better)
Translates to: IIEERIRVLSDD*SQLHLDLFLNE
Trigger: CTCATTTAAAAATAAATCCAGATGTAGTTGGCTGCAGTCATCTGACAGAACCCTGATTCTCTCTTCAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511555.5