RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMED5 (Homo sapiens)

Ensembl gene IDs: ENSG00000117500

Ensembl transcript IDs: ENST00000370280.1, ENST00000370282.8, ENST00000370290.7, ENST00000479918.5, ENST00000483033.1

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTaGCAACCACGAATCTTGTTTCCCATCTCTATAGCTTTATTATTT +
Preference number: 1 (lower is better)
Translates to: GSLYSHILLPFSPKT*QPRILFPISIALLF
Trigger: AAATAATAAAGCTATAGAGATGGGAAACAAGATTCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR GCA 90 bp ATGTTTCGATCACGAGCTTCAAATGCTCTAAGCAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTGGACTTGATGCTGTTGATGGATTCC +
Preference number: 1 (lower is better)
Translates to: MFRSRASNALSRVCM*PLLLSLDLMLLMDS
Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGATCGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR TCA 90 bp GCAAATGATCCAAGGATAACTGACAGGATTCTATATTGTGTTGGTTaGAAATTAAGAATCCTGAGCCATATTCCAGACCTGAATAATCAA +
Preference number: 1 (lower is better)
Translates to: ANDPRITDRILYCVG*KLRILSHIPDLNNQ
Trigger: TTGATTATTCAGGTCTGGAATATGGCTCAGGATTCTTAATTTTCAACCAACACAATATAGAATCCTGTCAGTTATCCTTGGATCATTTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAATACCCCTAGACACCTaGAGCATTTTCTTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRIPLDT*SIFLAN
Trigger: ATTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTAT...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGGCCATATTCCAGACCTaGATAATCAATTTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWAIFQT*IINFWG
Trigger: ACCCCAGAAATTGATTATTCAGGTCTGGAATATGGC...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CAA 90 bp TCACGAGCTTCAAATGCTCTAAGCAGAGTTTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATGCTGTTGATGGATTCCAGGATGTCT +
Preference number: 2 (lower is better)
Translates to: SRASNALSRVCMCPL*LSLDLMLLMDSRMS
Trigger: AGACATCCTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR CCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAAACACTTAAGTACAACTaGATCAGCAGGATTACTTGC +
Preference number: 2 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQTLKYN*ISRITC
Trigger: GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGT...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR-3UTR CCA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGGAAAATGTGTCCCTATaGAGGAGGAAGCTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWENVSL*RRKLLN
Trigger: GTTTAAAAGCTTCCTCCTCCATAGGGACACATTTTC...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR CCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACATCTAGATTCTTTAATTaGTGTCCTTTCCCCAGACGT +
Preference number: 2 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTSRFFN*CPFPRR
Trigger: ACGTCTGGGGAAAGGACACCAATTAAAGAATCTAGA...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCATACCCCTAGACACCTaGAGCATTTTCTTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIIPLDT*SIFLAN
Trigger: ATTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTAT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR-3UTR GCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACAATCAGCAGGATTACTTaGACAGAAAGTGAAGACTTA +
Preference number: 2 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTISRIT*TESEDL
Trigger: TAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGAT...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCAGGCAAGGATCTTATTaGCCTTTGTTCTGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIRQGSY*PLFCKC
Trigger: ACACTTGCAGAACAAAGGTCAATAAGATCCTTGCCT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR-3UTR CCA 90 bp TTTTCTTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGGAAAATGTCAGCTTTTaGGAATGTAAGCAAAGTACA +
Preference number: 2 (lower is better)
Translates to: FSFRCRDPESISIVPCLMENVSF*ECKQST
Trigger: TGTACTTTGCTTACATTCCCAAAAGCTGACATTTTC...CATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR CCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTGAAAATGTGTCCCTATaGAGGAGGAAGCTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASENVSL*RRKLLN
Trigger: GTTTAAAAGCTTCCTCCTCCATAGGGACACATTTTC...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR CAA 90 bp CACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAATCTaGTTTCCCATCTCTATAGCTTTATTATTTAAGAATGTTACAAAA +
Preference number: 2 (lower is better)
Translates to: HILLPFSPKTWQPRI*FPISIALLFKNVTK
Trigger: TTTTGTAACATTCTTAAATAATAAAGCTATAGAGATGGGAAACAAGATTCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAATCTCAGAAATGGTGCTaGATGTATTGTCAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKSQKWC*MYCQSR
Trigger: TCTGCTTTGACAATACATTCAGCACCATTTCTGAGA...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR GCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACAAGCAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTG +
Preference number: 2 (lower is better)
Translates to: YNWISRITCTESEDLIFTSRVCM*PLLLSL
Trigger: CAGACTAAGCAAAAGTGGGCACATACAAACTCTGCT...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR CCA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCAGGTGTAGAGAGCTATaGGGTTTCAAAACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPRCREL*GFKTGG
Trigger: TCCTCCTGTTTTGAAACCCCATAGCTCTCTACACCT...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CAA 90 bp GAACTGTCTTTTCTTTCTGCAATGGTATTACGTGTCCTTTTAGAATaGAAATCAAGGGTAGAAAGGTTAGATTTAGTCCAGCCTCCCATT +
Preference number: 2 (lower is better)
Translates to: ELSFLSAMVLRVLLE*KSRVERLDLVQPPI
Trigger: AATGGGAGGCTGGACTAAATCTAACCTTTCTACCCTTGATTTCAATTCTAAAAGGACACGTAATACCATTGCAGAAAGAAAAGACAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR GCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAATCACGAGCTTCAAATaGTCTAAGCAGAGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPITSFK*SKQSLY
Trigger: ATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGAT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR CAA 90 bp ATGACCACTAAATTAACCATAGACCAGAAATTGACTCTATCAAAGTaGCTTTCTTGTATGTTTCGATCACGAGCTTCAAATGCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: MTTKLTIDQKLTLSK*LSCMFRSRASNALS
Trigger: GCTTAGAGCATTTGAAGCTCGTGATCGAAACATACAAGAAAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGTTAATTTAGTGGTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR GCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTATCAGCAGGATTACTTaGACAGAAAGTGAAGACTTA +
Preference number: 2 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIISRIT*TESEDL
Trigger: TAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGAT...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
3UTR-3UTR GCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTATCTTCTTGTTCTTGTaGCTGTTCTCCCATATTATC +
Preference number: 2 (lower is better)
Translates to: SAKYSCYTLKYNWISRITIFLFL*LFSHII
Trigger: GATAATATGGGAGAACAGGCACAAGAACAAGAAGAT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR CAA 90 bp GGATTAGGGAGTAGTATCTTTCTTTCTGAGGGAGTTTATATCAGTTaGGGTAACAGATTCTCATTGTTCATTTTACTGCTTTCCTATTTC +
Preference number: 2 (lower is better)
Translates to: GLGSSIFLSEGVYIS*GNRFSLFILLLSYF
Trigger: GAAATAGGAAAGCAGTAAAATGAACAATGAGAATCTGTTACCCAAACTGATATAAACTCCCTCAGAAAGAAAGATACTACTCCCTAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR TCA 90 bp TCTGAGGGAGTTTATATCAGTTTGGGTAACAGATTCTCATTGTTCATTTTACTGAAGTATAAAGCAGTTTaGGCAACACTGATTGTGCAT +
Preference number: 2 (lower is better)
Translates to: SEGVYISLGNRFSLFILLKYKAV*ATLIVH
Trigger: ATGCACAATCAGTGTTGCTCAAACTGCTTTATACTT...CAGTAAAATGAACAATGAGAATCTGTTACCCAAACTGATATAAACTCCCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CCA 72 bp AATTGGTGTCCTTTCCCCAGACGTACATTAGGTGTATaGCTCCAGGTTATGACAACAGCCTTCCAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: NWCPFPRRTLGV*LQVMTTAFQKP
Trigger: AGGCTTCTGGAAGGCTGTTGTCATAACCTGGAGCCATACACCTAATGTACGTCTGGGGAAAGGACACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR CAA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAGGTTGTTTCCGGGTTTaGGCTATTATAAATGAAGGT +
Preference number: 3 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRGCFRV*AIINEG
Trigger: ACCTTCATTTATAATAGCCAAAACCCGGAAACAACC...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CCA 72 bp TATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTaGCAACCACGAATCTTGTTTCCCATCTCTATAGCT +
Preference number: 3 (lower is better)
Translates to: YSHILLPFSPKT*QPRILFPISIA
Trigger: AGCTATAGAGATGGGAAACAAGATTCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR GCA 72 bp CTTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTaGCCTGTCTTATGTAACATCATCCTAGCTCTAGAT +
Preference number: 3 (lower is better)
Translates to: LSDAGIQSPSPL*PVLCNIILALD
Trigger: ATCTAGAGCTAGGATGATGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR-3UTR CAA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTCTGGACTTGATGCTGTaGATGGATTCCAGGATGTCT +
Preference number: 3 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASLDLML*MDSRMS
Trigger: AGACATCCTGGAATCCATCAACAGCATCAAGTCCAG...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR CAA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTAGCATTACTAACCTGTaGAGGGGTTCTATACCCCAA +
Preference number: 3 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASSITNL*RGSIPQ
Trigger: TTGGGGTATAGAACCCCTCAACAGGTTAGTAATGCT...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR-3UTR CAA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTTGCTCTAAGCAGAGTTaGTATGTGCCCACTTTTGCT +
Preference number: 3 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASCSKQS*YVPTFA
Trigger: AGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCA...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR GCA 72 bp GTTGCTTTCTTGTATGTTTCGATCACGAGCTTCAAATaGTCTAAGCAGAGTTTGTATGTGCCCACTTTTGCT +
Preference number: 3 (lower is better)
Translates to: VAFLYVSITSFK*SKQSLYVPTFA
Trigger: AGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGATCGAAACATACAAGAAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR CAA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAACCAATCTTCTTGTTCTaGTGCCTGTTCTCCCATATT +
Preference number: 3 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKPIFLF*CLFSHI
Trigger: AATATGGGAGAACAGGCACAAGAACAAGAAGATTGG...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR-3UTR CAA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATG +
Preference number: 3 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGCMCPL*LSLDLM
Trigger: CATCAAGTCCAGACTAAGCAAAAGTGGGCACATACA...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR TCA 72 bp CCAAGGATAACTGACAGGATTCTATATTGTGTTGGTTaGAAATTAAGAATCCTGAGCCATATTCCAGACCTG +
Preference number: 3 (lower is better)
Translates to: PRITDRILYCVG*KLRILSHIPDL
Trigger: CAGGTCTGGAATATGGCTCAGGATTCTTAATTTTCAACCAACACAATATAGAATCCTGTCAGTTATCCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CCA 72 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTaGATCAGCAGGATTACTTGCACAGAAAGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: SAKYSCYTLKYN*ISRITCTESED
Trigger: GTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
3UTR-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTATCAAAGTTGCTTTCTaGTATGTTTCGATCACGAGC +
Preference number: 3 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIIKVAF*YVSITS
Trigger: GCTCGTGATCGAAACATACAAGAAAGCAACTTTGAT...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
3UTR-3UTR CAA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCCGTGTCCTTTTAGAATaGAAATCAAGGGTAGAAAGG +
Preference number: 3 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPRVLLE*KSRVER
Trigger: CCTTTCTACCCTTGATTTCAATTCTAAAAGGACACG...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR TCA 72 bp CATATTAGCTGTAGTAACAATCCCCTTTACAACATTTaGTCATTATTGCCACTTAACACTTCCAGGATTAGG +
Preference number: 3 (lower is better)
Translates to: HISCSNNPLYNI*SLLPLNTSRIR
Trigger: CCTAATCCTGGAAGTGTTAAGTGGCAATAATGATCAAATGTTGTAAAGGGGATTGTTACTACAGCTAATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CCA 72 bp AGTTTTATAAGAAACTGCCAAGAATATTTTCCACAGTaGCTCTACTATTTCATATCTCACCAGCAACGTATG +
Preference number: 3 (lower is better)
Translates to: SFIRNCQEYFPQ*LYYFISHQQRM
Trigger: CATACGTTGCTGGTGAGATATGAAATAGTAGAGCCACTGTGGAAAATATTCTTGGCAGTTTCTTATAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR TCA 72 bp ACATCCAGGTTGTTTCCGGGTTTTGGCTATTATAAATaGAGGTGCTATGTAACATTTGTGAATGTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: TSRLFPGFGYYK*RCYVTFVNVKF
Trigger: AAACTTAACATTCACAAATGTTACATAGCACCTTCATTTATAATAGCCAAAACCCGGAAACAACCTGGATGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAGGGAAATCTGGAGTCTaGAGAAACTCCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRGKSGV*RNSRWR
Trigger: CCGCCACCTGGAGTTTCTTCAGACTCCAGATTTCCC...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCCTTGTCGCCCATCCCTaGTGGGGCGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AKYSCYTLKYNWISRITCLVAHP*WGDPGL
Trigger: CAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAG...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAACTTGTCGCCCATCCCTaGTGGGGCGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKLVAHP*WGDPGL
Trigger: CAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAG...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCTTGTCGCCCATCCCTaGTGGGGCGATCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGLVAHP*WGDPGL
Trigger: CAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAG...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAGTCGCCCATCCCTGCTaGGGCGATCCCGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKVAHPC*GDPGLK
Trigger: TTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGAC...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTGGGGCGATCCCGGGCTaGAAGAGGCGTCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIGAIPG*KRRQVL
Trigger: CAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCC...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACATATCGAGGGAAGGTGTaGAGCCGGCCGCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: YNWISRITCTESEDLIFTYRGKV*SRPPQA
Trigger: TGCCTGGGGCGGCCGGCTTCACACCTTCCCTCGATA...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAATCTCTGGACTCCTCGTaGTTGACAGGGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQSLDSS*LTGKSG
Trigger: TCCAGATTTCCCTGTCAACCACGAGGAGTCCAGAGA...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CCA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAAGGTGTAGAGAGCTATaGGGTTTCAAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRRCREL*GFKTGG
Trigger: TCCTCCTGTTTTGAAACCCCATAGCTCTCTACACCT...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTGGGAAATCTGGAGTCTaGAGAAACTCCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASGKSGV*RNSRWR
Trigger: CCGCCACCTGGAGTTTCTTCAGACTCCAGATTTCCC...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCGGGGCGATCCCGGGCTaGAAGAGGCGTCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPGAIPG*KRRQVL
Trigger: CAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCC...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTGGGGCGATCCCGGGCTaGAAGAGGCGTCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPGAIPG*KRRQVL
Trigger: CAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCC...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAGCCATATTCCAGACCTaGATAATCAATTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRAIFQT*IINFWG
Trigger: ACCCCAGAAATTGATTATTCAGGTCTGGAATATGGC...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TCCCTTTATAGCCACATTCTCCTTCCCTTCAGTCCCAAGACCTGGCAACCACGAAGTCCATCTCCATTGTaGCCTGTCTTATGTAACATC +
Preference number: 4 (lower is better)
Translates to: SLYSHILLPFSPKTWQPRSPSPL*PVLCNI
Trigger: GATGTTACATAAGACAGGGCACAATGGAGATGGACT...TCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAGGAGAATGTGGCTATAAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp TCTGAGGGAGTTTATATCAGTTTGGGTAACAGATTCTCATTGTTCATTTTACTGGTCGCCCATCCCTGCTaGGGCGATCCCGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SEGVYISLGNRFSLFILLVAHPC*GDPGLK
Trigger: TTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGAC...CAGTAAAATGAACAATGAGAATCTGTTACCCAAACTGATATAAACTCCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp GATTCCAGGATGTCTTCCAGTTTCATATCCAATATATCTGTGCCAGTAATATATGTCGCCCATCCCTGCTaGGGCGATCCCGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DSRMSSSFISNISVPVIYVAHPC*GDPGLK
Trigger: TTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGAC...ATATATTACTGGCACAGATATATTGGATATGAAACTGGAAGACATCCTGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR CCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAAGGCCTTCAGGGGCATaGGCTGGTAGAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKRPSGA*AGRSTP
Trigger: AGGAGTGCTTCTACCAGCCCATGCCCCTGAAGGCCT...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAAGGCCTTCAGGGGCATaGGCTGGTAGAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPRPSGA*AGRSTP
Trigger: AGGAGTGCTTCTACCAGCCCATGCCCCTGAAGGCCT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGAGTGGCTTGTCTGGATaGTTTGAGGGAAATGACCAA +
Preference number: 4 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWSGLSG*FEGNDQ
Trigger: TTGGTCATTTCCCTCAAACCATCCAGACAAGCCACT...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAAAGGCAAGGATCTTATTaGCCTTTGTTCTGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQRQGSY*PLFCKC
Trigger: ACACTTGCAGAACAAAGGTCAATAAGATCCTTGCCT...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTTATGGCTCCAGGTTATaGCAACAGCCTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASYGSRL*QQPSRS
Trigger: GCTTCTGGAAGGCTGTTGTCATAACCTGGAGCCATA...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGGGTAAGTTCCCTGGGTaGTTATTTAGCATACCAAAC +
Preference number: 4 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWGKFPG*LFSIPN
Trigger: GTTTGGTATGCTAAATAAGCACCCAGGGAACTTACC...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAACGTACATTAGGTGTATaGCTCCAGGTTATGACAACA +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQRTLGV*LQVMTT
Trigger: TGTTGTCATAACCTGGAGCCATACACCTAATGTACG...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCATGGACTCCTCGTGGTTaGCAGGGAAATCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPWTPRG*QGNLES
Trigger: AGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCA...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAATTAATTCATGGTCAGTaGAGACCTTCAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQLIHGQ*RPSGFS
Trigger: GGAAAATCCTGAAGGTCTTCACTGACCATGAATTAA...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACAAGCAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTSRVCM*PLLLSL
Trigger: CAGACTAAGCAAAAGTGGGCACATACAAACTCTGCT...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAAGGCGTGAACCGCAGTaGCTGGCCCATTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPRREPQ*LAHFYF
Trigger: GAAGTAAAAATGGGCCAGGCACTGCGGTTCACGCCT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR CCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTGCTCCATCTAAAACTTaGTACTCGATCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASAPSKT*YSISSE
Trigger: CTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGC...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAAGAAAATGTGTCCCTATaGAGGAGGAAGCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQENVSL*RRKLLN
Trigger: GTTTAAAAGCTTCCTCCTCCATAGGGACACATTTTC...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR CAA 72 bp TTTCTTTCAGATGCAGGGATCCAGAGTCCATCTCCATaGTGCCCTGTCTTATGTAACATCATCCTAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FLSDAGIQSPSP*CPVLCNIILAL
Trigger: TAGAGCTAGGATGATGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CAA 72 bp AGAGTTTGTATGTGCCCACTTTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCCAGGATGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RVCMCPLLLSLD*MLLMDSRMSSS
Trigger: ACTGGAAGACATCCTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR TCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTTGGACTCCTCGTGGTTaGCAGGGAAATCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIWTPRG*QGNLES
Trigger: AGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCA...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCGCAGAAGCAGAAAGGTaGCTAAGGATTTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIAEAER*LRISTS
Trigger: GCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGC...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCGCTCCATCTAAAACTTaGTACTCGATCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIAPSKT*YSISSE
Trigger: CTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGC...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCATTCAGTCTCTACACTTaGCCTCGGAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPFSLYT*PRKVLG
Trigger: TCCCAGCACTTTCCGAGGCCAAGTGTAGAGACTGAA...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
3UTR CAA 72 bp TCAAATGCTCTAAGCAGAGTTTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATGCTGTTGATGGATTCC +
Preference number: 4 (lower is better)
Translates to: SNALSRVCMCPL*LSLDLMLLMDS
Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR TCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCATGGACTCCTCGTGGTTaGCAGGGAAATCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASWTPRG*QGNLES
Trigger: AGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCA...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAATAAACTTGAATGGCTaGCACCACCACCATGACCAC +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPINLNG*HHHHDH
Trigger: GTGGTCATGGTGGTGGTGTCAGCCATTCAAGTTTAT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACACCCCTTTACAACATTTaGTCATTATTGCCACTTAAC +
Preference number: 4 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTPLYNI*SLLPLN
Trigger: GTTAAGTGGCAATAATGATCAAATGTTGTAAAGGGG...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACAATCTTCTTGTTCTTGTaGCTGTTCTCCCATATTATC +
Preference number: 4 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTIFLFL*LFSHII
Trigger: GATAATATGGGAGAACAGGCACAAGAACAAGAAGAT...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACAACTGTCTTTTCTTTCTaGAATGGTATTACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTTVFSF*NGITCP
Trigger: AGGACACGTAATACCATTGCAGAAAGAAAAGACAGT...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTTCTCTGGACTCCTCGTaGTTGACAGGGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILISLDSS*LTGKSG
Trigger: TCCAGATTTCCCTGTCAACCACGAGGAGTCCAGAGA...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAAGAAAATGTCAGCTTTTaGGAATGTAAGCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQENVSF*ECKQST
Trigger: TGTACTTTGCTTACATTCCCAAAAGCTGACATTTTC...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTATAAACTTGAATGGCTaGCACCACCACCATGACCAC +
Preference number: 4 (lower is better)
Translates to: SAKYSCYTLKYNWISRITINLNG*HHHHDH
Trigger: GTGGTCATGGTGGTGGTGTCAGCCATTCAAGTTTAT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACAATAAACTTGAATGGCTaGCACCACCACCATGACCAC +
Preference number: 4 (lower is better)
Translates to: YNWISRITCTESEDLIFTINLNG*HHHHDH
Trigger: GTGGTCATGGTGGTGGTGTCAGCCATTCAAGTTTAT...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTAATCAATTTCTGGGGTaGGGTGGAGCAGGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILINQFLG*GGAGKF
Trigger: GAACTTACCTGCTCCACCTCACCCCAGAAATTGATT...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCTTGGCCTCGGAAAGTaGTGGGATTATAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPLGLGK*WDYRRE
Trigger: TTCACGCCTATAATCCCAGCACTTTCCGAGGCCAAG...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR CCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAGTTGACAGGGAAATCTaGAGTCTGAAGAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKVDREI*SLKKLQ
Trigger: CTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAAC...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTGCTCCATCTAAAACTTaGTACTCGATCTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIAPSKT*YSISSE
Trigger: CTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGC...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCATACCCCTAGACACCTaGAGCATTTTCTTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGIPLDT*SIFLAN
Trigger: ATTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTAT...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR GCA 90 bp CAAAGTAGAGTGATGTACAATAAGAGGTGTAGAGAGCTATGGGGTTTCAAAACAGGTGAACACGGTAACTaGTACATTATGGAAATCGGT +
Preference number: 4 (lower is better)
Translates to: QSRVMYNKRCRELWGFKTGEHGN*YIMEIG
Trigger: ACCGATTTCCATAATGTAGCAGTTACCGTGTTCACC...TGTTTTGAAACCCCATAGCTCTCTACACCTCTTATTGTACATCACTCTACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAGGTGAACACGGTAACTaGTACATTATGGAAATCGGT +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPGEHGN*YIMEIG
Trigger: ACCGATTTCCATAATGTAGCAGTTACCGTGTTCACC...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR CCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTGTTGACAGGGAAATCTaGAGTCTGAAGAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SAKYSCYTLKYNWISRITVDREI*SLKKLQ
Trigger: CTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAAC...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCACACTTAAGTACAACTaGATCAGCAGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLITLKYN*ISRITC
Trigger: GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR CAA 72 bp CTTCCCTTCAGTCCCAAGACCTGGCAACCACGAATCTaGTTTCCCATCTCTATAGCTTTATTATTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LPFSPKTWQPRI*FPISIALLFKN
Trigger: ATTCTTAAATAATAAAGCTATAGAGATGGGAAACAAGATTCGTGGTTGCCAGGTCTTGGGACTGAAGGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCTCTCAGAAATGGTGCTaGATGTATTGTCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AKYSCYTLKYNWISRITCSQKWC*MYCQSR
Trigger: TCTGCTTTGACAATACATTCAGCACCATTTCTGAGA...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTAGGCAAGGATCTTATTaGCCTTTGTTCTGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SAKYSCYTLKYNWISRITRQGSY*PLFCKC
Trigger: ACACTTGCAGAACAAAGGTCAATAAGATCCTTGCCT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR GCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCAGCAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGSRVCM*PLLLSL
Trigger: CAGACTAAGCAAAAGTGGGCACATACAAACTCTGCT...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTAGCAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SAKYSCYTLKYNWISRITSRVCM*PLLLSL
Trigger: CAGACTAAGCAAAAGTGGGCACATACAAACTCTGCT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCATCACGAGCTTCAAATaGTCTAAGCAGAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIITSFK*SKQSLY
Trigger: ATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGAT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR GCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTGTACTCACAATACGTTaGTTATTTAAGATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASVLTIR*LFKMAV
Trigger: AACAGCCATCTTAAATAAGCAACGTATTGTGAGTAC...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR GCA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTACATTTGATCATTATTaGCACTTAACACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASTFDHY*HLTLPG
Trigger: TCCTGGAAGTGTTAAGTGGCAATAATGATCAAATGT...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAGTTGACAGGGAAATCTaGAGTCTGAAGAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASVDREI*SLKKLQ
Trigger: CTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAAC...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCTCAGTCTCTACAGTGTaGACTCCATCTGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGSVSTV*TPSDFL
Trigger: AAGAAAATCAGATGGAGTTCACACTGTAGAGACTGA...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000479918.5
CDS-3UTR TCA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTCTCAGAAATGGTGCTaGATGTATTGTCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAKYSCYTLKYNWISRITSQKWC*MYCQSR
Trigger: TCTGCTTTGACAATACATTCAGCACCATTTCTGAGA...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR TCA 90 bp CAAAGTAGAGTGATGTACAATAAGAGGTGTAGAGAGCTATGGGGTTTCAAAACACAGTTTGAGCAACACTaGTTGTGCATTATTGTACTT +
Preference number: 4 (lower is better)
Translates to: QSRVMYNKRCRELWGFKTQFEQH*LCIIVL
Trigger: AAGTACAATAATGCACAATCAGTGTTGCTCAAACTG...TGTTTTGAAACCCCATAGCTCTCTACACCTCTTATTGTACATCACTCTACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAACAGTTTGAGCAACACTaGTTGTGCATTATTGTACTT +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKQFEQH*LCIIVL
Trigger: AAGTACAATAATGCACAATCAGTGTTGCTCAAACTG...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAAAGTATAAAGCAGTTTaGGCAACACTGATTGTGCAT +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKKYKAV*ATLIVH
Trigger: ATGCACAATCAGTGTTGCTCAAACTGCTTTATACTT...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCACTTCTTATACACGTGTaGACTCCATCTGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPLLIHV*TPSDFL
Trigger: AAGAAAATCAGATGGAGTTCACACGTGTATAAGAAG...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR GCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCAAAAACTAAGGTTTTaGCTTCTGGAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGQKLRF*LLERQD
Trigger: ATCTTGCCTCTCCAGAAGGCAAAACCTTAGTTTTTG...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTCAAAAACTAAGGTTTTaGCTTCTGGAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIQKLRF*LLERQD
Trigger: ATCTTGCCTCTCCAGAAGGCAAAACCTTAGTTTTTG...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAATCTTCTTGTTCTTGTaGCTGTTCTCCCATATTATC +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKIFLFL*LFSHII
Trigger: GATAATATGGGAGAACAGGCACAAGAACAAGAAGAT...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCATCACGAGCTTCAAATaGTCTAAGCAGAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: AKYSCYTLKYNWISRITCITSFK*SKQSLY
Trigger: ATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGAT...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCTCTGGAGAGGCAAGATaGAAATCAATATCTAATCCT +
Preference number: 4 (lower is better)
Translates to: AKYSCYTLKYNWISRITCSGEAR*KSISNP
Trigger: AGGATTAGATATTGATTTCCATCTTGCCTCTCCAGA...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTACACTTAAGTACAACTaGATCAGCAGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: VIEPVKNRLVLQLGPILITLKYN*ISRITC
Trigger: GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGT...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCGAAAATGTGTCCCTATaGAGGAGGAAGCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGENVSL*RRKLLN
Trigger: GTTTAAAAGCTTCCTCCTCCATAGGGACACATTTTC...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
3UTR CAA 72 bp CATAGACCAGAAATTGACTCTATCAAAGTTGCTTTCTaGTATGTTTCGATCACGAGCTTCAAATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: HRPEIDSIKVAF*YVSITSFKCSK
Trigger: CTTAGAGCATTTGAAGCTCGTGATCGAAACATACAAGAAAGCAACTTTGATAGAGTCAATTTCTGGTCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR TCA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCTCAGTCTCTACAGTGTaGACTCCATCTGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPSVSTV*TPSDFL
Trigger: AAGAAAATCAGATGGAGTTCACACTGTAGAGACTGA...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR TCA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCAAGTATAAAGCAGTTTaGGCAACACTGATTGTGCAT +
Preference number: 4 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGKYKAV*ATLIVH
Trigger: ATGCACAATCAGTGTTGCTCAAACTGCTTTATACTT...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR TCA 90 bp TCTGAGGGAGTTTATATCAGTTTGGGTAACAGATTCTCATTGTTCATTTTACTGACCATTCACTCTTTTTaGAGGACATCCAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SEGVYISLGNRFSLFILLTIHSF*RTSRLF
Trigger: AAACAACCTGGATGTCCTTCAAAAAGAGTGAATGGT...CAGTAAAATGAACAATGAGAATCTGTTACCCAAACTGATATAAACTCCCTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACAATCTTCTTGTTCTTGTaGCTGTTCTCCCATATTATC +
Preference number: 4 (lower is better)
Translates to: YNWISRITCTESEDLIFTIFLFL*LFSHII
Trigger: GATAATATGGGAGAACAGGCACAAGAACAAGAAGAT...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACAATCAGCAGGATTACTTaGACAGAAAGTGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: YNWISRITCTESEDLIFTISRIT*TESEDL
Trigger: TAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGAT...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAGTACTCACAATACGTTaGTTATTTAAGATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKVLTIR*LFKMAV
Trigger: AACAGCCATCTTAAATAAGCAACGTATTGTGAGTAC...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CCA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACATCTGGAGAGGCAAGATaGAAATCAATATCTAATCCT +
Preference number: 4 (lower is better)
Translates to: YNWISRITCTESEDLIFTSGEAR*KSISNP
Trigger: AGGATTAGATATTGATTTCCATCTTGCCTCTCCAGA...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAACACTTAAGTACAACTaGATCAGCAGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASTLKYN*ISRITC
Trigger: GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGT...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCATCTAGATTCTTTAATTaGTGTCCTTTCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASSRFFN*CPFPRR
Trigger: ACGTCTGGGGAAAGGACACCAATTAAAGAATCTAGA...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCATCACGAGCTTCAAATaGTCTAAGCAGAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPITSFK*SKQSLY
Trigger: ATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGAT...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR GCA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTATCAGCAGGATTACTTaGACAGAAAGTGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPISRIT*TESEDL
Trigger: TAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGAT...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR GCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAATCAGCAGGATTACTTaGACAGAAAGTGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASISRIT*TESEDL
Trigger: TAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGAT...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp TCTGAGGGAGTTTATATCAGTTTGGGTAACAGATTCTCATTGTTCATTTTACTGTCTGGAGAGGCAAGATaGAAATCAATATCTAATCCT +
Preference number: 4 (lower is better)
Translates to: SEGVYISLGNRFSLFILLSGEAR*KSISNP
Trigger: AGGATTAGATATTGATTTCCATCTTGCCTCTCCAGA...CAGTAAAATGAACAATGAGAATCTGTTACCCAAACTGATATAAACTCCCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CAA 72 bp CAGCAACGTATGAGTGGTCCACTTATCCAATTTCTCTaGCATCCTAGCAAAACAACTCTAAAATTTATCATT +
Preference number: 4 (lower is better)
Translates to: QQRMSGPLIQFL*HPSKTTLKFII
Trigger: AATGATAAATTTTAGAGTTGTTTTGCTAGGATGCAAGAGAAATTGGATAAGTGGACCACTCATACGTTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
3UTR CAA 72 bp TTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTaGCAATTAGGCCCAATACTCATTTATTTAAATCAC +
Preference number: 4 (lower is better)
Translates to: FWVIEPVKNRLV*QLGPILIYLNH
Trigger: GTGATTTAAATAAATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CCA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAGAAAATGTCAGCTTTTaGGAATGTAAGCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: EKTINGLDCNSLLHFYASENVSF*ECKQST
Trigger: TGTACTTTGCTTACATTCCCAAAAGCTGACATTTTC...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS TCA 90 bp GGCAGCCAGATCTTGTCGCCCATCCCTGCTGGGGCGATCCCGGGCTaGAAGAGGCGTCAGGTACTGTTGTCTCCGCTCCGCGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GSQILSPIPAGAIPG*KRRQVLLSPLRVSS
Trigger: AGAGGAAACGCGGAGCGGAGACAACAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAGATCTGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS GCA 90 bp CAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTaGTGGGGCGATCCCGGGCTGAAAGAGGCGTCAGGTACTGTTGTC +
Preference number: 5 (lower is better)
Translates to: QKEHGEGQPDLVAHP*WGDPGLKEASGTVV
Trigger: GACAACAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAGATCTGGCTGCCCTTCCCCGTGCTCCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS TCA 90 bp TACTGTTGTCTCCGCTCCGCGTTTCCTCTCTGGACTCCTCGTGGTTaGCAGGGAAATCTGGAGTCTGAAGAAACTCCAGGTGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: YCCLRSAFPLWTPRG*QGNLESEETPGGGR
Trigger: GCGGCCGCCACCTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAGAGAGGAAACGCGGAGCGGAGACAACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAAAAGGGCAGCCAGATCTaGTCGCCCATCCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQKGSQI*SPIPAG
Trigger: CCCAGCAGGGATGGGCGACAAGATCTGGCTGCCCTT...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp TCTGCAAGTGTTGCAGAGGATACCCCTAGACACCTGAAGCATTTTCTTGGCCAACTGGACTCCTCGTGGTaGACAGGGAAATCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SASVAEDTPRHLKHFLGQLDSSW*TGKSGV
Trigger: GACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAG...TTGGCCAAGAAAATGCTTCAGGTGTCTAGGGGTATCCTCTGCAACACTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp ACAATAAGAGGTGTAGAGAGCTATGGGGTTTCAAAACAGGAGGAGAGAGCACATCTGGACTCCTCGTGGTaGACAGGGAAATCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: TIRGVESYGVSKQEERAHLDSSW*TGKSGV
Trigger: GACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAG...ATGTGCTCTCTCCTCCTGTTTTGAAACCCCATAGCTCTCTACACCTCTTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAAAGGGCAGCCAGATCTaGTCGCCCATCCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKKGSQI*SPIPAG
Trigger: CCCAGCAGGGATGGGCGACAAGATCTGGCTGCCCTT...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAAAGGGCAGCCAGATCTaGTCGCCCATCCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPKGSQI*SPIPAG
Trigger: CCCAGCAGGGATGGGCGACAAGATCTGGCTGCCCTT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGCAGAGTCCATCTCCATaGTGCCCTGTCTTATGTAAC +
Preference number: 5 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWQSPSP*CPVLCN
Trigger: GTTACATAAGACAGGGCACAATGGAGATGGACTCTG...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTAGGCGTCAGGTACTGTaGTCTCCGCTCCGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: SAKYSCYTLKYNWISRITRRQVL*SPLRVS
Trigger: GGAAACGCGGAGCGGAGACAACAGTACCTGACGCCT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACACTGGACTTGATGCTGTaGATGGATTCCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTLDLML*MDSRMS
Trigger: AGACATCCTGGAATCCATCAACAGCATCAAGTCCAG...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS GCA 90 bp CCTCCTGTCCAGTTCTCTCACACTCTCTCTTGTATTACTACAGATTaGACACCTATCCTCTTTGGCACTTATGAGACGTTCTCTGGAATC +
Preference number: 5 (lower is better)
Translates to: PPVQFSHTLSCITTD*TPILFGTYETFSGI
Trigger: GATTCCAGAGAACGTCTCATAAGTGCCAAAGAGGATAGGTGTGCAATCTGTAGTAATACAAGAGAGAGTGTGAGAGAACTGGACAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS-3UTR CAA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAAGGCGTCAGGTACTGTaGTCTCCGCTCCGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: EKTINGLDCNSLLHFYASRRQVL*SPLRVS
Trigger: GGAAACGCGGAGCGGAGACAACAGTACCTGACGCCT...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGTCAAAAACTAAGGTTTaGCCTTCTGGAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWSKTKV*PSGEAR
Trigger: TCTTGCCTCTCCAGAAGGCAAAACCTTAGTTTTTGA...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TTTTCTTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTGCTCTAAGCAGAGTTaGTATGTGCCCACTTTTGCT +
Preference number: 5 (lower is better)
Translates to: FSFRCRDPESISIVPCLMCSKQS*YVPTFA
Trigger: AGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCA...CATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGTAACACTGCCCTGCATTTTCTaGCCTTTTTCTTTCAGATGC +
Preference number: 5 (lower is better)
Translates to: FQMQGSRVHLHCALSYVTLPCIF*PFSFRC
Trigger: GCATCTGAAAGAAAAAGGCAAGAAAATGCAGGGCAG...TGTTACATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCCTTCAGTCTCTACACTaGGCCTCGGAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: AKYSCYTLKYNWISRITCLQSLH*ASESAG
Trigger: CCCAGCACTTTCCGAGGCCAAGTGTAGAGACTGAAG...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370290.7
CDS-3UTR CAA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACACTGGACTCCTCGTGGTaGACAGGGAAATCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: YNWISRITCTESEDLIFTLDSSW*TGKSGV
Trigger: GACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAG...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TTTTCTTTCAGATGCAGGGATCCAGAGTCCATCTCCATTGTGCCCTGTCTTATGAAAAACAGACTGGTGTaGCAATTAGGCCCAATACTC +
Preference number: 5 (lower is better)
Translates to: FSFRCRDPESISIVPCLMKNRLV*QLGPIL
Trigger: GAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTT...CATAAGACAGGGCACAATGGAGATGGACTCTGGATCCCTGCATCTGAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGGGTTGTTTCCGGGTTTaGGCTATTATAAATGAAGGT +
Preference number: 5 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWGCFRV*AIINEG
Trigger: ACCTTCATTTATAATAGCCAAAACCCGGAAACAACC...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TGCAGAAGCAGAAAGGTGCCTAAGGATTTCTACCAGCTTGTGGTAGAAGAGTGGTACCTACACCAAGCATaGTACTTTTCCTATATGCTA +
Preference number: 5 (lower is better)
Translates to: CRSRKVPKDFYQLVVEEWYLHQA*YFSYML
Trigger: TAGCATATAGGAAAAGTACAATGCTTGGTGTAGGTA...CCACTCTTCTACCACAAGCTGGTAGAAATCCTTAGGCACCTTTCTGCTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCAGCATTACTAACCTGTaGAGGGGTTCTATACCCCAA +
Preference number: 5 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLISITNL*RGSIPQ
Trigger: TTGGGGTATAGAACCCCTCAACAGGTTAGTAATGCT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCTTTGTTCTGCAAGTGTaGCAGAGGATACCCCTAGAC +
Preference number: 5 (lower is better)
Translates to: AKYSCYTLKYNWISRITCFVLQV*QRIPLD
Trigger: GTCTAGGGGTATCCTCTGCAACACTTGCAGAACAAA...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp CAAAAGGGAGGGGTATTCATAGGCAAGGATCTTATTGACCTTTGTTCTGCAAGTCCAAGCATAATTCCCTaGAGGTCCATGCAATTTGTT +
Preference number: 5 (lower is better)
Translates to: QKGGVFIGKDLIDLCSASPSIIP*RSMQFV
Trigger: AACAAATTGCATGGACCTCAAGGGAATTATGCTTGG...ACTTGCAGAACAAAGGTCAATAAGATCCTTGCCTATGAATACCCCTCCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: AKYSCYTLKYNWISRITCCMCPL*LSLDLM
Trigger: CATCAAGTCCAGACTAAGCAAAAGTGGGCACATACA...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCAGCATTACTAACCTGTaGAGGGGTTCTATACCCCAA +
Preference number: 5 (lower is better)
Translates to: AKYSCYTLKYNWISRITCSITNL*RGSIPQ
Trigger: TTGGGGTATAGAACCCCTCAACAGGTTAGTAATGCT...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTTTTGTTCTGCAAGTGTaGCAGAGGATACCCCTAGAC +
Preference number: 5 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIFVLQV*QRIPLD
Trigger: GTCTAGGGGTATCCTCTGCAACACTTGCAGAACAAA...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTCTGGACTTGATGCTGTaGATGGATTCCAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: VIEPVKNRLVLQLGPILILDLML*MDSKMQ
Trigger: CTGCATCTTGGAATCCATCAACAGCATCAAGTCCAG...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479918.5
CDS-3UTR CAA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAATCAAAAACTAAGGTTTaGCCTTCTGGAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKSKTKV*PSGEAR
Trigger: TCTTGCCTCTCCAGAAGGCAAAACCTTAGTTTTTGA...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCC +
Preference number: 5 (lower is better)
Translates to: VIEPVKNRLVLQLGPILILLSLD*MLLMDS
Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAA...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: VIEPVKNRLVLQLGPILICMCPL*LSLDLM
Trigger: CATCAAGTCCAGACTAAGCAAAAGTGGGCACATACA...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp AGTCAGAGAGTACAGTACAGTAACAGCCATACAGGAGAGGTAGAATTCTTAATCATCAAAGTTGCTTTCTaGTATGTTTCGATCACGAGC +
Preference number: 5 (lower is better)
Translates to: SQRVQYSNSHTGEVEFLIIKVAF*YVSITS
Trigger: GCTCGTGATCGAAACATACAAGAAAGCAACTTTGAT...GATTAAGAATTCTACCTCTCCTGTATGGCTGTTACTGTACTGTACTCTCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS-3UTR CAA 90 bp ATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCACAGAAAAAAAACAGACTGGTGTaGCAATTAGGCCCAATACTC +
Preference number: 5 (lower is better)
Translates to: IPVTHLSTTGSAGLLAQKKNRLV*QLGPIL
Trigger: GAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTT...TTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAAT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCTGGCAACCACGAATCTaGTTTCCCATCTCTATAGCT +
Preference number: 5 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGWQPRI*FPISIA
Trigger: AGCTATAGAGATGGGAAACAAGATTCGTGGTTGCCA...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS CCA 90 bp AGAATAATAATTAACTGTTTCTTAGCCTGGAATTCAAGACCACCATaGTGTGGACTCCAACTGACTTCAACACATTCTTCTACTACTTCC +
Preference number: 5 (lower is better)
Translates to: RIIINCFLAWNSRPP*CGLQLTSTHSSTTS
Trigger: GGAAGTAGTAGAAGAATGTGTTGAAGTCAGTTGGAGTCCACACCATGGTGGTCTTGAATTCCAGGCTAAGAAACAGTTAATTATTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS-3UTR CAA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACATCAAAAACTAAGGTTTaGCCTTCTGGAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: YNWISRITCTESEDLIFTSKTKV*PSGEAR
Trigger: TCTTGCCTCTCCAGAAGGCAAAACCTTAGTTTTTGA...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCCCAATACTCATTCCAATCTTCTTGTTCTaGTGCCTGTTCTCCCATATT +
Preference number: 5 (lower is better)
Translates to: VIEPVKNRLVLQLGPILIPIFLF*CLFSHI
Trigger: AATATGGGAGAACAGGCACAAGAACAAGAAGATTGG...AATGAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATG +
Preference number: 5 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPCMCPL*LSLDLM
Trigger: CATCAAGTCCAGACTAAGCAAAAGTGGGCACATACA...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCATGCTCTAAGCAGAGTTaGTATGTGCCCACTTTTGCT +
Preference number: 5 (lower is better)
Translates to: EKTINGLDCNSLLHFYASCSKQS*YVPTFA
Trigger: AGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCA...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTTGCTCTAAGCAGAGTTaGTATGTGCCCACTTTTGCT +
Preference number: 5 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPCSKQS*YVPTFA
Trigger: AGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCA...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp AAAAAGTTCTGGGTAATAGAACCTGTTAAAAACAGACTGGTGTTGCAATTAGGCAAAAACAGACTGGTGTaGCAATTAGGCCCAATACTC +
Preference number: 5 (lower is better)
Translates to: KKFWVIEPVKNRLVLQLGKNRLV*QLGPIL
Trigger: GAGTATTGGGCCTAATTGCAACACCAGTCTGTTTTT...GCCTAATTGCAACACCAGTCTGTTTTTAACAGGTTCTATTACCCAGAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TACAACTGGATCAGCAGGATTACTTGCACAGAAAGTGAAGACTTAATTTTCACAATCAAAGTTGCTTTCTaGTATGTTTCGATCACGAGC +
Preference number: 5 (lower is better)
Translates to: YNWISRITCTESEDLIFTIKVAF*YVSITS
Trigger: GCTCGTGATCGAAACATACAAGAAAGCAACTTTGAT...TGTGAAAATTAAGTCTTCACTTTCTGTGCAAGTAATCCTGCTGATCCAGTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TCCTCTTATCTTCAAACAGACTCTTCAGCATATAAACTTGAATGGCTGACACCAACCATAGACCAGAAATaGACTCTATCAAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: SSYLQTDSSAYKLEWLTPTIDQK*TLSKLL
Trigger: AAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGT...TGGTGTCAGCCATTCAAGTTTATATGCTGAAGAGTCTGTTTGAAGATAAGAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp GCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTTGCCTTATCCAATTTCTCTaGCATCCTAGCAAAACAACT +
Preference number: 5 (lower is better)
Translates to: AKYSCYTLKYNWISRITCLIQFL*HPSKTT
Trigger: AGTTGTTTTGCTAGGATGCAAGAGAAATTGGATAAG...GCAAGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp TCTGCAAAATATTCCTGTTACACACTTAAGTACAACTGGATCAGCAGGATTACTAACCATTCACTCTTTTaGAAGGACATCCAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SAKYSCYTLKYNWISRITNHSLF*KDIQVV
Trigger: AACAACCTGGATGTCCTTCAAAAAGAGTGAATGGTT...AGTAATCCTGCTGATCCAGTTGTACTTAAGTGTGTAACAGGAATATTTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAATCAAAGTTGCTTTCTaGTATGTTTCGATCACGAGC +
Preference number: 5 (lower is better)
Translates to: EKTINGLDCNSLLHFYASIKVAF*YVSITS
Trigger: GCTCGTGATCGAAACATACAAGAAAGCAACTTTGAT...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp TGGAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCGTGTCCTTTTAGAATaGAAATCAAGGGTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: WRRPLMVLTVTVYCIFMPRVLLE*KSRVER
Trigger: CCTTTCTACCCTTGATTTCAATTCTAAAAGGACACG...AGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp CTATTTAGTATTCCATGGTGTGGACATACTAAACCATTCACTCTTTTTGAAGGAACCATAGACCAGAAATaGACTCTATCAAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LFSIPWCGHTKPFTLFEGTIDQK*TLSKLL
Trigger: AAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGT...TCCTTCAAAAAGAGTGAATGGTTTAGTATGTCCACACCATGGAATACTAAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS-3UTR CAA 90 bp GAGAAGACCATTAATGGTCTTGACTGTAACAGTTTATTGCATTTTTATGCCTCAACCATAGACCAGAAATaGACTCTATCAAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: EKTINGLDCNSLLHFYASTIDQK*TLSKLL
Trigger: AAGCAACTTTGATAGAGTCAATTTCTGGTCTATGGT...TGAGGCATAAAAATGCAATAAACTGTTACAGTCAAGACCATTAATGGTCTTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS-3UTR CAA 90 bp AGAATGTTACAAAAACAGAATCATACAGTGTGTAAAACTTTAGGATTGTCCCCCGGTAACAGATTCTCATaGTTCATTTTACTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: RMLQKQNHTVCKTLGLSPGNRFS*FILLLS
Trigger: GGAAAGCAGTAAAATGAACAATGAGAATCTGTTACC...GGGGGACAATCCTAAAGTTTTACACACTGTATGATTCTGTTTTTGTAACATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370282.8
CDS GCA 72 bp CACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTaGTGGGGCGATCCCGGGCTGAAAGAGGCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: HGEGQPDLVAHP*WGDPGLKEASG
Trigger: ACCTGACGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAGATCTGGCTGCCCTTCCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS TCA 72 bp ATCTTGTCGCCCATCCCTGCTGGGGCGATCCCGGGCTaGAAGAGGCGTCAGGTACTGTTGTCTCCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: ILSPIPAGAIPG*KRRQVLLSPLR
Trigger: GCGGAGCGGAGACAACAGTACCTGACGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS CCA 72 bp CTTGGTACTCGATCTCCAGCGAGGCCTTCAGGGGCATaGGCTGGTAGAAGCACTCCTTCTGGCCGGCGGGAA +
Preference number: 6 (lower is better)
Translates to: LGTRSPARPSGA*AGRSTPSGRRE
Trigger: TTCCCGCCGGCCAGAAGGAGTGCTTCTACCAGCCCATGCCCCTGAAGGCCTCGCTGGAGATCGAGTACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370280.1
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS CCA 72 bp TTCCTCTCTGGACTCCTCGTGGTTGACAGGGAAATCTaGAGTCTGAAGAAACTCCAGGTGGCGGCCGCGGCG +
Preference number: 6 (lower is better)
Translates to: FLSGLLVVDREI*SLKKLQVAAAA
Trigger: CGCCGCGGCCGCCACCTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAGAGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370282.8
ENST00000370290.7
CDS TCA 72 bp CTCCGCTCCGCGTTTCCTCTCTGGACTCCTCGTGGTTaGCAGGGAAATCTGGAGTCTGAAGAAACTCCAGGT +
Preference number: 6 (lower is better)
Translates to: LRSAFPLWTPRG*QGNLESEETPG
Trigger: ACCTGGAGTTTCTTCAGACTCCAGATTTCCCTGTCAACCACGAGGAGTCCAGAGAGGAAACGCGGAGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370282.8
ENST00000370290.7
ENST00000479918.5
CDS TCA 72 bp CCTGGAATTCAAGACCACCATGGTGTGGACTCCAACTaGCTTCAACACATTCTTCTACTACTTCCCAGTATG +
Preference number: 6 (lower is better)
Translates to: PGIQDHHGVDSN*LQHILLLLPSM
Trigger: CATACTGGGAAGTAGTAGAAGAATGTGTTGAAGTCAGTTGGAGTCCACACCATGGTGGTCTTGAATTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CAA 90 bp TCACGAGCTTCAAATGCTCTAAGCAGAGTTTGTATGTGCCCACTTTaGCTTAGTCTGGACTTGATGCTGTTGATGGATTCCAAGATGCAG +
Preference number: 6 (lower is better)
Translates to: SRASNALSRVCMCPL*LSLDLMLLMDSKMQ
Trigger: CTGCATCTTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCTGCTTAGAGCATTTGAAGCTCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479918.5
CDS GCA 72 bp CAGTTCTCTCACACTCTCTCTTGTATTACTACAGATTaGACACCTATCCTCTTTGGCACTTATGAGACGTTC +
Preference number: 6 (lower is better)
Translates to: QFSHTLSCITTD*TPILFGTYETF
Trigger: GAACGTCTCATAAGTGCCAAAGAGGATAGGTGTGCAATCTGTAGTAATACAAGAGAGAGTGTGAGAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CCA 72 bp ATTAACTGTTTCTTAGCCTGGAATTCAAGACCACCATaGTGTGGACTCCAACTGACTTCAACACATTCTTCT +
Preference number: 6 (lower is better)
Translates to: INCFLAWNSRPP*CGLQLTSTHSS
Trigger: AGAAGAATGTGTTGAAGTCAGTTGGAGTCCACACCATGGTGGTCTTGAATTCCAGGCTAAGAAACAGTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CAA 72 bp AGAGTTTGTATGTGCCCACTTTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCCAAGATGCAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: RVCMCPLLLSLD*MLLMDSKMQSY
Trigger: ATAAGACTGCATCTTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGGCACATACAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479918.5
CDS CAA 72 bp ACTTCAACACATTCTTCTACTACTTCCCAGTATGAATaGTGTATTCGAAGCAGGCCGGTTCATTTACTAGCC +
Preference number: 6 (lower is better)
Translates to: TSTHSSTTSQYE*CIRSRPVHLLA
Trigger: GGCTAGTAAATGAACCGGCCTGCTTCGAATACACAATTCATACTGGGAAGTAGTAGAAGAATGTGTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CAA 90 bp CTCCAACTGACTTCAACACATTCTTCTACTACTTCCCAGTATGAATaGTGTATTCGAAGCAGGCCGGTTCATTTACTAGCCAATGAATAC +
Preference number: 6 (lower is better)
Translates to: LQLTSTHSSTTSQYE*CIRSRPVHLLANEY
Trigger: GTATTCATTGGCTAGTAAATGAACCGGCCTGCTTCGAATACACAATTCATACTGGGAAGTAGTAGAAGAATGTGTTGAAGTCAGTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CAA 90 bp CTCACACTCTCTCTTGTATTACTACAGATTGCACACCTATCCTCTTaGGCACTTATGAGACGTTCTCTGGAATCTAAGCATCTTTTTGTA +
Preference number: 6 (lower is better)
Translates to: LTLSLVLLQIAHLSS*ALMRRSLESKHLFV
Trigger: TACAAAAAGATGCTTAGATTCCAGAGAACGTCTCATAAGTGCCAAAGAGGATAGGTGTGCAATCTGTAGTAATACAAGAGAGAGTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS TCA 72 bp ACTGACTTCAACACATTCTTCTACTACTTCCCAGTATaGATTGTGTATTCGAAGCAGGCCGGTTCATTTACT +
Preference number: 6 (lower is better)
Translates to: TDFNTFFYYFPV*IVYSKQAGSFT
Trigger: AGTAAATGAACCGGCCTGCTTCGAATACACAATTCATACTGGGAAGTAGTAGAAGAATGTGTTGAAGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1
CDS CAA 72 bp TCTCTTGTATTACTACAGATTGCACACCTATCCTCTTaGGCACTTATGAGACGTTCTCTGGAATCTAAGCAT +
Preference number: 6 (lower is better)
Translates to: SLVLLQIAHLSS*ALMRRSLESKH
Trigger: ATGCTTAGATTCCAGAGAACGTCTCATAAGTGCCAAAGAGGATAGGTGTGCAATCTGTAGTAATACAAGAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483033.1