RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149488

Ensembl transcript IDs: ENST00000358864.2, ENST00000496948.2, ENST00000644205.1

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCTGGCATGAAACCAGAACTGGAATTCTGGGCCGAGGCCCTCTaGGCAGACTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGA +
Preference number: 1 (lower is better)
Translates to: QAGMKPELEFWAEAL*ADCLGRGGAPGQLR
Trigger: TCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAGTCTGCTCAGAGGGCCTCGGCCCAGAATTCCAGTTCTGGTTTCATGCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 90 bp TGGCTCAGGCAGGCAGAGTGTTCCCTGCCTCAGGGCCTGGCATTCTaGTGCAGAAGGCCAGGTGTTGGTGTGGTGGCCATCTTTGGGCCT +
Preference number: 1 (lower is better)
Translates to: WLRQAECSLPQGLAF*CRRPGVGVVAIFGP
Trigger: AGGCCCAAAGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCAGGCCCTGAGGCAGGGAACACTCTGCCTGCCTGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR GCA 90 bp GCAGAGTCCTGGACTGTGACTCCCACCCTACCTAGGCTCTGCCCTTaGCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCTTCCCC +
Preference number: 1 (lower is better)
Translates to: AESWTVTPTLPRLCP*HQGLLNGLAPGFFP
Trigger: GGGGAAGAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 90 bp CCAGCAGCAGGAGGCCCATGTAGAAGTTGTTGGATCGGGAGGCTTTaGACACGCGTTCATGGGGTACGTTGCTGCTCATCACCGCCCAGC +
Preference number: 1 (lower is better)
Translates to: PAAGGPCRSCWIGRL*TRVHGVRCCSSPPS
Trigger: GCTGGGCGGTGATGAGCAGCAACGTACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCAACAACTTCTACATGGGCCTCCTGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR GCA 90 bp GCTGTTGCAGAGTCCTGGACTGTGACTCCCACCCTACCTAGGCTCTaGCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTC +
Preference number: 1 (lower is better)
Translates to: AVAESWTVTPTLPRL*PCHQGLLNGLAPGF
Trigger: GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTGCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp CTCAGGGCCTGGCATTCTGATGCAGAAGGCCAGGTGTTGGTGTGGTaGCCATCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTG +
Preference number: 1 (lower is better)
Translates to: LRAWHSDAEGQVLVW*PSLGLLVLIGWVTV
Trigger: CACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCAGGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 90 bp AGGGCAGTTAGTGCAGAGATGGCTCCAGCTTCCCTAAAGGACAGGTaGAGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAG +
Preference number: 1 (lower is better)
Translates to: RAVSAEMAPASLKDR*SHCLPPSVADKGLK
Trigger: CTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATCTCTGCACTAACTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp AAAGGAAGGAGCTGTGTGCAAGATAGCTGGGCTGTTGCAGAGTCCTaGACTGTGACTCCCACCCTACCTAGGCTCTGCCCTTGCCATCAA +
Preference number: 1 (lower is better)
Translates to: KGRSCVQDSWAVAES*TVTPTLPRLCPCHQ
Trigger: TTGATGGCAAGGGCAGAGCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTGCAACAGCCCAGCTATCTTGCACACAGCTCCTTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 90 bp AAGGCCAGGTGTTGGTGTGGTGGCCATCTTTGGGCCTTCTGGTCCTaGTTGGTTGGGTTACAGTGCCAGGATCCCTGTACTGAGGTTTCA +
Preference number: 1 (lower is better)
Translates to: KARCWCGGHLWAFWS*LVGLQCQDPCTEVS
Trigger: TGAAACCTCAGTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp CCAGGTGTTGGTGTGGTGGCCATCTTTGGGCCTTCTGGTCCTGATTaGTTGGGTTACAGTGCCAGGATCCCTGTACTGAGGTTTCAGGTA +
Preference number: 1 (lower is better)
Translates to: PGVGVVAIFGPSGPD*LGYSARIPVLRFQV
Trigger: TACCTGAAACCTCAGTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp AATGGCATCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTaGCATGAAACCAGAACTGGAATTCTGGGCCGAGGCCCTCTGAGC +
Preference number: 1 (lower is better)
Translates to: NGIGDSPKVPWPFTG*HETRTGILGRGPLS
Trigger: GCTCAGAGGGCCTCGGCCCAGAATTCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 90 bp ACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTaGTTAGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCA +
Preference number: 1 (lower is better)
Translates to: TSSGLRNVGPSPSPS*LGKLAETRVLNCIP
Trigger: TGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp ACTGTGCCTGGCCTGGACCTTTCATTTAAACCAGCTCACTTCCTCTaGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGG +
Preference number: 1 (lower is better)
Translates to: TVPGLDLSFKPAHFL*IEKCRPFSIPLLVR
Trigger: CCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAAATGAAAGGTCCAGGCCAGGCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 90 bp TTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTAGCTaGCAAGGGCCTGAAGGAATCAAAGTTCATGCATTCCAAGAGAGG +
Preference number: 1 (lower is better)
Translates to: FPKGQVKPLSSSFGS*QGPEGIKVHAFQER
Trigger: CCTCTCTTGGAATGCATGAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 90 bp GTTTCCTTCCAAGATAAGAGGCACTGGGCAACTCACTCGCTCCTGTaGTTCACTGTTTTCACTCCCTGTTTTGTGCTCCATGGTGTAAGC +
Preference number: 1 (lower is better)
Translates to: VSFQDKRHWATHSLL*FTVFTPCFVLHGVS
Trigger: GCTTACACCATGGAGCACAAAACAGGGAGTGAAAACAGTGAATCACAGGAGCGAGTGAGTTGCCCAGTGCCTCTTATCTTGGAAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp ATAATGAGAGTTGAGGCTGCTCAGATGCAATTCCCTATCAACCATTaGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGCCAAAT +
Preference number: 1 (lower is better)
Translates to: IMRVEAAQMQFPINH*LSTGVCGPLSPRPN
Trigger: ATTTGGCCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 90 bp CAGAAAACCCTCTTAAATGGCATCGGTGATTCACCCAAAGTTCCATaGCCTTTTACAGGCTGGCATGAAACCAGAACTGGAATTCTGGGC +
Preference number: 1 (lower is better)
Translates to: QKTLLNGIGDSPKVP*PFTGWHETRTGILG
Trigger: GCCCAGAATTCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGATGCCATTTAAGAGGGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 90 bp AAATATTCGCCTCCACTGTCAGATTTCAGCCCCCATAATGAGAGTTaGGGCTGCTCAGATGCAATTCCCTATCAACCATTGGCTCAGTAC +
Preference number: 1 (lower is better)
Translates to: KYSPPLSDFSPHNES*GCSDAIPYQPLAQY
Trigger: GTACTGAGCCAATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTGACAGTGGAGGCGAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 90 bp ACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTaGAATATTCGCCTCCACTGTCAGATTTCAGCCCCCATAATGAGA +
Preference number: 1 (lower is better)
Translates to: TGPMVIVFLVCSRTS*NIRLHCQISAPIMR
Trigger: TCTCATTATGGGGGCTGAAATCTGACAGTGGAGGCGAATATTTCAGGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 90 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTaGTGTGTTCCAGGACTTCCTGAAATATTCGCCTCCACTGTCAGA +
Preference number: 1 (lower is better)
Translates to: LKASSRRQDQWLLCS*CVPGLPEIFASTVR
Trigger: TCTGACAGTGGAGGCGAATATTTCAGGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 90 bp GAAATCAGGCATTGCAACATCTTCGTTAGCCTTGCCAGGAGAGATTaGTGTGAAATAATTTATCCTGTTTCTCCTGGTCACATGTCCCTA +
Preference number: 1 (lower is better)
Translates to: EIRHCNIFVSLARRD*CEIIYPVSPGHMSL
Trigger: TAGGGACATGTGACCAGGAGAAACAGGATAAATTATTTCACACCAATCTCTCCTGGCAAGGCTAACGAAGATGTTGCAATGCCTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp CATAAAATTACACTTCATCAGATCAGGATGGTTGGTTTGTGTTTGTaGTGGGTATTTATGTGTATTAGTAACCAGTGGAGGCCTGACAGT +
Preference number: 1 (lower is better)
Translates to: HKITLHQIRMVGLCL*WVFMCISNQWRPDS
Trigger: ACTGTCAGGCCTCCACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 90 bp AAAATTACACTTCATCAGATCAGGATGGTTGGTTTGTGTTTGTGGTaGGTATTTATGTGTATTAGTAACCAGTGGAGGCCTGACAGTAAT +
Preference number: 1 (lower is better)
Translates to: KITLHQIRMVGLCLW*VFMCISNQWRPDSN
Trigger: ATTACTGTCAGGCCTCCACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp GTTCCCTGCCTCAGGGCCTGGCATTCTGATGCAGAAGGCCAGGTGTaGGTGTGGTGGCCATCTTTGGGCCTTCTGGTCCTGATTGGTTGG +
Preference number: 2 (lower is better)
Translates to: VPCLRAWHSDAEGQV*VWWPSLGLLVLIGW
Trigger: CCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCAGGCCCTGAGGCAGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCAGAGTCCTGGACTGTaGCTCCCACCCTACCTAGGC +
Preference number: 2 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSQSPGL*LPPYLG
Trigger: GCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTG...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTTGGGCCGAGGCCCTCTaGGCAGACTGCCTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSWAEAL*ADCLGR
Trigger: CCTCCCGAGGCAGTCTGCTCAGAGGGCCTCGGCCCA...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCCTCTGAGGCCTCACTaGTTACCTGGGTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSPLRPH*LPGSGS
Trigger: GCTCCCAGACCCAGGTAAGCAGTGAGGCCTCAGAGG...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTGCCTCACTGCTTACCTaGGTCTGGGAGCACAGAGTG +
Preference number: 2 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSASLLT*VWEHRV
Trigger: CACTCTGTGCTCCCAGACCCAGGTAAGCAGTGAGGC...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp TGGCATTCTGATGCAGAAGGCCAGGTGTTGGTGTGGTGGCCATCTTaGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCC +
Preference number: 2 (lower is better)
Translates to: WHSDAEGQVLVWWPS*GLLVLIGWVTVPGS
Trigger: GGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCTGCCAGGGCTTTGCCTaGCTTTCTGAGTCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGCQGFA*LSESGG
Trigger: TCCCCCAGACTCAGAAAGTCAGGCAAAGCCCTGGCA...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp GGTGTTGGTGTGGTGGCCATCTTTGGGCCTTCTGGTCCTGATTGGTaGGGTTACAGTGCCAGGATCCCTGTACTGAGGTTTCAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: GVGVVAIFGPSGPDW*GYSARIPVLRFQVG
Trigger: ACCTACCTGAAACCTCAGTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp TACCTTACATGCACACCAGTGACTGCAGGCTGGGCCAGTGAGGTGTaGTGGAAGAGACATGTACAGCACAGGTGCCTGAGCCAGAGATTC +
Preference number: 2 (lower is better)
Translates to: YLTCTPVTAGWASEV*WKRHVQHRCLSQRF
Trigger: GAATCTCTGGCTCAGGCACCTGTGCTGTACATGTCTCTTCCACAACACCTCACTGGCCCAGCCTGCAGTCACTGGTGTGCATGTAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCAAGCTTCCCTTGGGCTaGGTACTGGGGTATCACCAG +
Preference number: 2 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGKLPLG*VLGYHQ
Trigger: CTGGTGATACCCCAGTACCCAGCCCAAGGGAAGCTT...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACCTGCTTACCTGGGTCTaGGAGCACAGAGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYLLTWV*EHRVEE
Trigger: TTCCTCCACTCTGTGCTCCCAGACCCAGGTAAGCAG...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTACTCAGAGACATGGGTaGGAGGGTCTCTGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: CVLVTSGGLTVITRGPMATQRHG*EGLWGP
Trigger: AGGGCCCCAGAGACCCTCTCACCCATGTCTCTGAGT...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp TGCCTGGCCTGGACCTTTCATTTAAACCAGCTCACTTCCTCTGGATaGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAG +
Preference number: 2 (lower is better)
Translates to: CLAWTFHLNQLTSSG*RNVGPSPSPSWLGK
Trigger: CTTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAAATGAAAGGTCCAGGCCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTTTACATGCACACCAGTaGCTGCAGGCTGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSLHAHQ*LQAGPV
Trigger: CACTGGCCCAGCCTGCAGTCACTGGTGTGCATGTAA...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTTGGATCGGGAGGCTTTaGACACGCGTTCATGGGGTA +
Preference number: 2 (lower is better)
Translates to: NFLSSSFQALNGHRWLVAWIGRL*TRVHGV
Trigger: TACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCA...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTTGGGAGGTGGAGGCATaGGAATCGCTTGAACCTGGC +
Preference number: 2 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSWEVEA*ESLEPG
Trigger: GCCAGGTTCAAGCGATTCTCATGCCTCCACCTCCCA...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACCCTAGGCTCTGCCCTTaGCATCAAGGCCTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYPRLCP*HQGLLN
Trigger: ATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTCCTTGGGCTGGGTACTaGGGTATCACCAGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAPWAGY*GITSLP
Trigger: GGGAAGACTGGTGATACCCCAGTACCCAGCCCAAGG...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp TCAGGTAGGTTAGCTTGGGGGAAGGCATATGACACACAGGCAGTTTaGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTG +
Preference number: 2 (lower is better)
Translates to: SGRLAWGKAYDTQAV*DLGLGPGFHGNQAL
Trigger: CAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTGTCATATGCCTTCCCCCAAGCTAACCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR TCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCAGTGCTCCCGGGCAACTaGGACTCTGCACCTGAACGG +
Preference number: 2 (lower is better)
Translates to: AATWMEQEVIMLSEISQAVLPGN*DSAPER
Trigger: CCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCAC...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTGGTGTAAGCTTCCCTTaGGCTGGGTACTGGGGTATC +
Preference number: 2 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAGVSFP*AGYWGI
Trigger: GATACCCCAGTACCCAGCCCAAGGGAAGCTTACACC...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTCTGTTTTGTGCTCCATaGTGTAAGCTTCCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLLFCAP*CKLPLG
Trigger: GCCCAAGGGAAGCTTACACCATGGAGCACAAAACAG...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCTTCCCTATCAACCATTaGCTCAGTACTGGAGTGTGT +
Preference number: 2 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSFPINH*LSTGVC
Trigger: ACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACTGAGACTCTGCACCTaGACGGCCCGCAGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: AATWMEQEVIMLSEISQALRLCT*TARSQR
Trigger: CCTTTGACTGCGGGCCGTTCAGGTGCAGAGTCTCAG...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CCA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTCCATTGGCTCAGTACTaGAGTGTGTGGTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: NFLSSSFQALNGHRWLVAPLAQY*SVWSTF
Trigger: GAAAGTGGACCACACACTCCAGTACTGAGCCAATGG...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACGACAGAGCATGTATGTaGGAGGAAAGAGGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYDRACM*EERGER
Trigger: TCTCTCCCCTCTTTCCTCTCACATACATGCTCTGTC...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR GCA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGCATGTACAGCACAGGTaGCTGAGCCAGAGATTCTGC +
Preference number: 2 (lower is better)
Translates to: KPSTFPLISNSAYEGWARHVQHR*LSQRFC
Trigger: GCAGAATCTCTGGCTCAGGCACCTGTGCTGTACATG...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGCATGGGGTACGTTGCTaGTCATCACCGCCCAGCACT +
Preference number: 2 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQHGVRC*SSPPST
Trigger: AGTGCTGGGCGGTGATGAGCAGCAACGTACCCCATG...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTGAGGGGAGAGAACCTTaGTTTGGTATGTGTGAAACT +
Preference number: 2 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLEGREP*FGMCET
Trigger: AGTTTCACACATACCAAACCAAGGTTCTCTCCCCTC...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATCCAGCTCACTTCCTCTaGATTGAGAAATGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHPAHFL*IEKCRP
Trigger: GGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGG...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTGCCAGTGAGGTGTTGTaGAAGAGACATGTACAGCAC +
Preference number: 2 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSASEVL*KRHVQH
Trigger: GTGCTGTACATGTCTCTTCCACAACACCTCACTGGC...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACATGGAAATCAGGCATTaGAACATCTTCGTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYMEIRH*NIFVSL
Trigger: AAGGCTAACGAAGATGTTGCAATGCCTGATTTCCAT...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTCTAAACTGTATCCCATaGAAAAAGTCTACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLLNCIP*KKSTRV
Trigger: CACCCTCGTAGACTTTTTCCATGGGATACAGTTTAG...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGTGAGCCACCACTCCTaGCCAGACTTGTTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHVSHHS*PDLLLL
Trigger: TAACAACAACAAGTCTGGCCAGGAGTGGTGGCTCAC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp AGGAGGTTTCTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATaGTGTTCTTGGTGTGTTCCAGGACTTCCTGAAATATTCGCCTCC +
Preference number: 2 (lower is better)
Translates to: RRFLKASSRRQDQWL*CSWCVPGLPEIFAS
Trigger: GGAGGCGAATATTTCAGGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAGAAACCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTAGATCATTCCTTGGTTaGAGATCAAACCCAGCACAT +
Preference number: 2 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSRSFLG*RSNPAH
Trigger: ATGTGCTGGGTTTGATCTTCAACCAAGGAATGATCT...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTTTGAGGCTGCTCAGATaGAATTCCCTATCAACCATT +
Preference number: 2 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTLRLLR*NSLSTI
Trigger: AATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAA...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CCA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTAGAAGACAGGACCAATaGTTATTGTGTTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: NFLSSSFQALNGHRWLVARRQDQ*LLCSWC
Trigger: ACACCAAGAACACAATAACCATTGGTCCTGTCTTCT...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR GCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACAGGAATCAAAGTTCATaGATTCCAAGAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYRNQSS*IPREET
Trigger: TGTCTCCTCTCTTGGAATGCATGAACTTTGATTCCT...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACATTGTTCATTACACTaGGAAAAAGCAGTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPEHCSLH*EKAVSL
Trigger: AAGGGAAACTGCTTTTTCCCAGTGTAATGAACAATG...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR TCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCAAGCACAGCAGGGAGATaGCAGTTAACAATAATTCAT +
Preference number: 2 (lower is better)
Translates to: AATWMEQEVIMLSEISQASTAGR*QLTIIH
Trigger: ATGAATTATTGTTAACTGTCATCTCCCTGCTGTGCT...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CAA 90 bp TCACATAAAATTACACTTCATCAGATCAGGATGGTTGGTTTGTGTTaGTGGTGGGTATTTATGTGTATTAGTAACCAGTGGAGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: SHKITLHQIRMVGLC*WWVFMCISNQWRPD
Trigger: GTCAGGCCTCCACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTTATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp ATTCCGTCACATAAAATTACACTTCATCAGATCAGGATGGTTGGTTaGTGTTTGTGGTGGGTATTTATGTGTATTAGTAACCAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: IPSHKITLHQIRMVG*CLWWVFMCISNQWR
Trigger: CCTCCACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTTATGTGACGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 90 bp TATACATTCCGTCACATAAAATTACACTTCATCAGATCAGGATGGTaGGTTTGTGTTTGTGGTGGGTATTTATGTGTATTAGTAACCAGT +
Preference number: 2 (lower is better)
Translates to: YTFRHIKLHFIRSGW*VCVCGGYLCVLVTS
Trigger: ACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTTATGTGACGGAATGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp AGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTaGACGGCCCGCAGTCAAAGGAGGGTGGGAGGGACA +
Preference number: 3 (lower is better)
Translates to: RGGAPGQLRLCT*TARSQRRVGGT
Trigger: TGTCCCTCCCACCCTCCTTTGACTGCGGGCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 72 bp ATGAAACCAGAACTGGAATTCTGGGCCGAGGCCCTCTaGGCAGACTGCCTCGGGAGGGGAGGTGCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: MKPELEFWAEAL*ADCLGRGGAPG
Trigger: CCCGGGAGCACCTCCCCTCCCGAGGCAGTCTGCTCAGAGGGCCTCGGCCCAGAATTCCAGTTCTGGTTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCTTGGATCGGGAGGCTTaGAACACGCGTTCATGGGGT +
Preference number: 3 (lower is better)
Translates to: LPREGRCSRATETLHLNGLDREA*NTRSWG
Trigger: ACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCAA...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR GCA 72 bp TGGACTGTGACTCCCACCCTACCTAGGCTCTGCCCTTaGCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: WTVTPTLPRLCP*HQGLLNGLAPG
Trigger: GCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGGTAGGGTGGGAGTCACAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp AGCTGTGTGCAAGATAGCTGGGCTGTTGCAGAGTCCTaGACTGTGACTCCCACCCTACCTAGGCTCTGCCCT +
Preference number: 3 (lower is better)
Translates to: SCVQDSWAVAES*TVTPTLPRLCP
Trigger: AGGGCAGAGCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTGCAACAGCCCAGCTATCTTGCACACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR GCA 72 bp TCACCAGGAGCTCAGGTAAGAGGTAGGTACCTTACATaGACACCAGTGACTGCAGGCTGGGCCAGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: SPGAQVRGRYLT*TPVTAGWASEV
Trigger: CACCTCACTGGCCCAGCCTGCAGTCACTGGTGTGCATGTAAGGTACCTACCTCTTACCTGAGCTCCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp GGTCAGCAGGCGCAGCACATTAATGCCCACCAGGCCTaGAGCATAGAAGGAGCCCATCCAGATCATTCCTTG +
Preference number: 3 (lower is better)
Translates to: GQQAQHINAHQA*SIEGAHPDHSL
Trigger: CAAGGAATGATCTGGATGGGCTCCTTCTATGCTCCAGGCCTGGTGGGCATTAATGTGCTGCGCCTGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp TGGCATTCTGATGCAGAAGGCCAGGTGTTGGTGTGGTaGCCATCTTTGGGCCTTCTGGTCCTGATTGGTTGG +
Preference number: 3 (lower is better)
Translates to: WHSDAEGQVLVW*PSLGLLVLIGW
Trigger: CCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp TGTTGGTGTGGTGGCCATCTTTGGGCCTTCTGGTCCTaGTTGGTTGGGTTACAGTGCCAGGATCCCTGTACT +
Preference number: 3 (lower is better)
Translates to: CWCGGHLWAFWS*LVGLQCQDPCT
Trigger: AGTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCACACCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp GGAGGCCCATGTAGAAGTTGTTGGATCGGGAGGCTTTaGACACGCGTTCATGGGGTACGTTGCTGCTCATCA +
Preference number: 3 (lower is better)
Translates to: GGPCRSCWIGRL*TRVHGVRCCSS
Trigger: TGATGAGCAGCAACGTACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCAACAACTTCTACATGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp GGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTaGTTAGGGAAGCTGGCAGAAACCCGTGTCCTAAAC +
Preference number: 3 (lower is better)
Translates to: GLRNVGPSPSPS*LGKLAETRVLN
Trigger: GTTTAGGACACGGGTTTCTGCCAGCTTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp CTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTaGGTACTGGGGTATCACCAGTCTTCCCACCAATCC +
Preference number: 3 (lower is better)
Translates to: LFCAPWCKLPLG*VLGYHQSSHQS
Trigger: GGATTGGTGGGAAGACTGGTGATACCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp TTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATaGAACCAGAACTGGAATTCTGGGCCGAGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: FTQSSMAFYRLA*NQNWNSGPRPS
Trigger: AGAGGGCCTCGGCCCAGAATTCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 72 bp CACTCAACGGCCACAGGTGGCTGGTGGCTACTGAAATaGACAGCGCAGACACAGAACGACCTAACATTTCCA +
Preference number: 3 (lower is better)
Translates to: HSTATGGWWLLK*TAQTQNDLTFP
Trigger: TGGAAATGTTAGGTCGTTCTGTGTCTGCGCTGTTCATTTCAGTAGCCACCAGCCACCTGTGGCCGTTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp AAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATaGAAAAAGTCTACGAGGGTGGTCATGGCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: KLAETRVLNCIP*KKSTRVVMALP
Trigger: GGGAAGGGCCATGACCACCCTCGTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp GGGGGAAGGCATATGACACACAGGCAGTTTTGGATTTaGGGCTTGGACCTGGGTTCCATGGAAATCAGGCAT +
Preference number: 3 (lower is better)
Translates to: GGRHMTHRQFWI*GLDLGSMEIRH
Trigger: ATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTGTCATATGCCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTaGCATGAAACCAGAACTGGAATTCTGGGCCGAGGC +
Preference number: 3 (lower is better)
Translates to: GDSPKVPWPFTG*HETRTGILGRG
Trigger: GCCTCGGCCCAGAATTCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACGTGAAACTGGGGTACTaGAGGATCAGCCCTAGGGTC +
Preference number: 3 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYVKLGY*RISPRV
Trigger: GACCCTAGGGCTGATCCTCAAGTACCCCAGTTTCAC...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CAA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTCAGGCAGTTTTGGATTaGGGGCTTGGACCTGGGTTC +
Preference number: 3 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAQAVLD*GLGPGF
Trigger: GAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTG...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp GGCCTGGACCTTTCATTTAAACCAGCTCACTTCCTCTaGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTC +
Preference number: 3 (lower is better)
Translates to: GLDLSFKPAHFL*IEKCRPFSIPL
Trigger: GAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAAATGAAAGGTCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CCA 72 bp GTTGAGGCTGCTCAGATGCAATTCCCTATCAACCATTaGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: VEAAQMQFPINH*LSTGVCGPLSP
Trigger: AGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACGAGAAGGGAAGGGATTaGGGAGGGAAGTTAGAAATT +
Preference number: 3 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYEKGRD*GGKLEI
Trigger: AATTTCTAACTTCCCTCCCAAATCCCTTCCCTTCTC...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CAA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTAGGCAAGTGGATTGTTaGAGGCCAGGAGTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSRQVDC*RPGVQG
Trigger: GCCTTGAACTCCTGGCCTCAAACAATCCACTTGCCT...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp CAGGATCCCTGTACTGAGGTTTCAGGTAGGTTAGCTTaGGGGAAGGCATATGACACACAGGCAGTTTTGGAT +
Preference number: 3 (lower is better)
Translates to: QDPCTEVSGRLA*GKAYDTQAVLD
Trigger: ATCCAAAACTGCCTGTGTGTCATATGCCTTCCCCCAAGCTAACCTACCTGAAACCTCAGTACAGGGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CAA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACGGAGAGAACCTTGGTTaGGTATGTGTGAAACTGGGG +
Preference number: 3 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYGENLG*VCVKLG
Trigger: CCCCAGTTTCACACATACCAAACCAAGGTTCTCTCC...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp CAAGATAAGAGGCACTGGGCAACTCACTCGCTCCTGTaGTTCACTGTTTTCACTCCCTGTTTTGTGCTCCAT +
Preference number: 3 (lower is better)
Translates to: QDKRHWATHSLL*FTVFTPCFVLH
Trigger: ATGGAGCACAAAACAGGGAGTGAAAACAGTGAATCACAGGAGCGAGTGAGTTGCCCAGTGCCTCTTATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR TCA 72 bp CCTCCACTGTCAGATTTCAGCCCCCATAATGAGAGTTaGGGCTGCTCAGATGCAATTCCCTATCAACCATTG +
Preference number: 3 (lower is better)
Translates to: PPLSDFSPHNES*GCSDAIPYQPL
Trigger: CAATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTGACAGTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 72 bp TCCATCCTGGCAGAAAACCCTCTTAAATGGCATCGGTaGTTCACCCAAAGTTCCATGGCCTTTTACAGGCTG +
Preference number: 3 (lower is better)
Translates to: SILAENPLKWHR*FTQSSMAFYRL
Trigger: CAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGATGCCATTTAAGAGGGTTTTCTGCCAGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTCTGAACCAAGATATTaGGGAGGGCAGTTAGTGCAG +
Preference number: 3 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHSEPRY*GGQLVQ
Trigger: CTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR-3UTR CAA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCATTCCCTATCAACCATaGGCTCAGTACTGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSIPYQP*AQYWSV
Trigger: CACACTCCAGTACTGAGCCAATGGTTGATAGGGAAT...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTCATCCAGATCATTCCTaGGTTGAAGATCAAACCCAG +
Preference number: 3 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTHPDHS*VEDQTQ
Trigger: CTGGGTTTGATCTTCAACCAAGGAATGATCTGGATG...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 72 bp ATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTaGAATATTCGCCTCCACTGTCAGATTTCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: MVIVFLVCSRTS*NIRLHCQISAP
Trigger: GGGGGCTGAAATCTGACAGTGGAGGCGAATATTTCAGGAAGTCCTGGAACACACCAAGAACACAATAACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CCA 72 bp CTCTTAAATGGCATCGGTGATTCACCCAAAGTTCCATaGCCTTTTACAGGCTGGCATGAAACCAGAACTGGA +
Preference number: 3 (lower is better)
Translates to: LLNGIGDSPKVP*PFTGWHETRTG
Trigger: TCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGATGCCATTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR-3UTR CAA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGCAGGACCAATGGTTATaGTGTTCTTGGTGTGTTCCA +
Preference number: 3 (lower is better)
Translates to: KPSTFPLISNSAYEGWARQDQWL*CSWCVP
Trigger: TGGAACACACCAAGAACACAATAACCATTGGTCCTG...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR TCA 72 bp GAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATaGCAGTTAACAATAATTCATTGTATAATTTCAAAG +
Preference number: 3 (lower is better)
Translates to: EEVPVFHSTAGR*QLTIIHCIISK
Trigger: CTTTGAAATTATACAATGAATTATTGTTAACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCACCCCGGGCTTGGGCTaGCCCCGGCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFTPGLG*PRRAPS
Trigger: AGAAGGAGCGCGCCGGGGGCAGCCCAAGCCCGGGGT...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCATCAAACTCAGCATATaGAGGCTGGGCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPREGRCSRATETLHLNGIKLSI*RLGQAR
Trigger: CCTGGCCTGGCCCAGCCTTCATATGCTGAGTTTGAT...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGGCTGAGCTCCGCGCCTaGCTGGGGTCCCCTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGAELRA*LGSPRL
Trigger: AAGCCGAGGGGACCCCAGGCAGGCGCGGAGCTCAGC...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCGCACTGCTGGGGTCCTaGACAGGCTCACGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFALLGS*TGSRSV
Trigger: CACGCTGCGTGAGCCTGTGCAGGACCCCAGCAGTGC...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTTCCTTCTGGCTTCGCTaGGCTCCGCGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSSFWLR*APRLPG
Trigger: CCCAGGCAGGCGCGGAGCTCAGCGAAGCCAGAAGGA...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCATGTCCATGAAGTGGTaGCCTACAAATCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPREGRCSRATETLHLNGMSMKW*PTNPAS
Trigger: GGAGGCTGGATTTGTAGGTCACCACTTCATGGACAT...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCGCAGGATGGCTGGGATaGTCAGGCCTGGATTGGCGA +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFAGWLG*SGLDWR
Trigger: TCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGC...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCAAGGTCGACCACTGTaGGCGTGGGGTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGQGRPL*AWGSEL
Trigger: CAGCTCTGAACCCCACGCTCACAGTGGTCGACCTTG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCCTGAGACTCTGCACCTaGACGGCCCGCAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSLRLCT*TARSQR
Trigger: CCTTTGACTGCGGGCCGTTCAGGTGCAGAGTCTCAG...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAATGGGCCGAGGCCCTCTaGGCAGACTGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPEWAEAL*ADCLGR
Trigger: CCTCCCGAGGCAGTCTGCTCAGAGGGCCTCGGCCCA...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGGCACATCTGCAGGGTaGAGGGGTGGTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFGTSAG*RGGRGT
Trigger: TGTCCCCCGACCACCCCTGCACCCTGCAGATGTGCC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGGGCACATCTGCAGGGTaGAGGGGTGGTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: FPINHWLSTGVCGPLSPRGTSAG*RGGRGT
Trigger: TGTCCCCCGACCACCCCTGCACCCTGCAGATGTGCC...CCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGAGGTCCCAGGGCCCTaGGCCTTCTTGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFEVPGP*AFLSMA
Trigger: GGCCATGGACAAGAAGGCGCAGGGCCCTGGGACCTC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTGCTGCTGTCCGCTCCTaGAAGGAGGCCCTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLAAVRS*KEALSS
Trigger: CGACGAGAGGGCCTCCTTCCAGGAGCGGACAGCAGC...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGCTCCTTTTCCCTCTTTaGGGCTGCTGTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGLLFPL*GCCPLL
Trigger: CAGGAGCGGACAGCAGCCCCAAAGAGGGAAAAGGAG...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTTCAGCTTCTTCGCCATaGGCCAGGGCTTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSSASSP*ARACSA
Trigger: TGCGGAGCAAGCCCTGGCCCATGGCGAAGAAGCTGA...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGCAGAGGCAGGCAGTGTaGTCCTGCTGGCAGAATTGG +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGQRQAV*SCWQNW
Trigger: CCAATTCTGCCAGCAGGACCACACTGCCTGCCTCTG...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGGCGTGGCCAGAATCTaGTCCGATTCCAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFGVARI*SDSRGP
Trigger: CGGCCCCCTGGAATCGGACCAGATTCTGGCCACGCC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCAAGCTTCCCTTGGGCTaGGTACTGGGGTATCACCAG +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFKLPLG*VLGYHQ
Trigger: CTGGTGATACCCCAGTACCCAGCCCAAGGGAAGCTT...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGGCCTCACTGCTTACCTaGGTCTGGGAGCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGASLLT*VWEHRV
Trigger: CACTCTGTGCTCCCAGACCCAGGTAAGCAGTGAGGC...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCCAGGTGTTGGTGTGGTaGCCATCTTTGGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFQVLVW*PSLGLL
Trigger: CAGAAGGCCCAAAGATGGCCACCACACCAACACCTG...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCTCACTAGGGGACCAATaGCTCAGGCAGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFSLGDQ*LRQAEC
Trigger: ACACTCTGCCTGCCTGAGCCATTGGTCCCCTAGTGA...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCCGTCGCGCTTTCTCCTaGCCTCGCAGGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFRRAFS*PRRSSL
Trigger: CAGAGAGGACCTGCGAGGGCAGGAGAAAGCGCGACG...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACCCTCTGAGGCCTCACTaGTTACCTGGGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYPLRPH*LPGSGS
Trigger: GCTCCCAGACCCAGGTAAGCAGTGAGGCCTCAGAGG...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAGGTCAGCAGCACTGCTaGGGTCCTGCACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVREGQQHC*GPAQAH
Trigger: GTGAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACC...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGCTTCAGTCCAGTGCGTaGGTGGTAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGLQSSA*VVILQG
Trigger: GCCCTGGAGAATTACCACCCACGCACTGGACTGAAG...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCCTTGGGCTGGGTACTaGGGTATCACCAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGPWAGY*GITSLP
Trigger: GGGAAGACTGGTGATACCCCAGTACCCAGCCCAAGG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTCCTGGGCCTCCCTaGGCTCTGTCAGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGIPGPP*ALSASS
Trigger: CGAAGAAGCTGACAGAGCTCAGGGAGGCCCAGGAAT...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCCCCCAGCAGGATGGTaGTGTACGTTACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSPPAGW*CTLPAC
Trigger: ACATGCTGGTAACGTACATCACCATCCTGCTGGGGG...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCCAGAGTCCTGGACTGTaGCTCCCACCCTACCTAGGC +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFQSPGL*LPPYLG
Trigger: GCCTAGGTAGGGTGGGAGTCACAGTCCAGGACTCTG...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCGTTCCCCAGGAAGAGTaGAAAGATGCGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSVPQEE*KDASQL
Trigger: CAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAAC...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACGTTCATGGGGTACGTTaGTGCTCATCACCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYVHGVR*CSSPPS
Trigger: GCTGGGCGGTGATGAGCAGCAACGTACCCCATGAAC...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GAGACATGTACAGCACAGGTGCCTGAGCCAGAGATTCTGCCAGAGCATAGAAGGGTTCATGGGGTACGTTaGTGCTCATCACCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ETCTAQVPEPEILPEHRRVHGVR*CSSPPS
Trigger: GCTGGGCGGTGATGAGCAGCAACGTACCCCATGAAC...CCTTCTATGCTCTGGCAGAATCTCTGGCTCAGGCACCTGTGCTGTACATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAACCTGCTCCAGGATCTaGGCCAGTTCCTCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRETCSRI*ASSSSD
Trigger: GTCCGAGGAGGAACTGGCCCAGATCCTGGAGCAGGT...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCTCTCCAGGGCAGCGATaGTTTCAAACAGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSSPGQR*FQTEGD
Trigger: GTCCCCCTCTGTTTGAAACCATCGCTGCCCTGGAGA...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTGGTGTAAGCTTCCCTTaGGCTGGGTACTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGGVSFP*AGYWGI
Trigger: GATACCCCAGTACCCAGCCCAAGGGAAGCTTACACC...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCAGAAGGCCAGGTGTTaGTGTGGTGGCCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGQKARC*CGGHLW
Trigger: CCAAAGATGGCCACCACACCAACACCTGGCCTTCTG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCCTAACATTTCCATCCTaGCAGAAAACCCTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPREGRCSRATETLHLNGLTFPS*QKTLLN
Trigger: ATTTAAGAGGGTTTTCTGCCAGGATGGAAATGTTAG...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCGGGATGAAGTACGGTTaGTTAACTGGTACAAATATA +
Preference number: 4 (lower is better)
Translates to: LPREGRCSRATETLHLNGGMKYG*LTGTNI
Trigger: TATATTTGTACCAGTTAACCAACCGTACTTCATCCC...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGACCAGCAGTAGTTCATaGACCGCACAAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGTSSSS*TAQNKP
Trigger: GGGCTTGTTTTGTGCGGTTCATGAACTACTGCTGGT...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CAGATGCAATTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTAGGGTGGGAGGGACATaGTGGTGTAGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: QMQFPINHWLSTGVCGPLRVGGT*WCRPPA
Trigger: TGCCGGTGGCCTACACCATCATGTCCCTCCCACCCT...AAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCTCCTCCTTCGGTAGCTaGCAAGGGCCTGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGSSFGS*QGPEGI
Trigger: GATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGA...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAAGTGCTCCCGGGCAACTaGGACTCTGCACCTGAACGG +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPEVLPGN*DSAPER
Trigger: CCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCAC...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTTTTCACTCCGCCTCGTaGTTCCTCTTTCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSFHSAS*FLFQAL
Trigger: AAGGGCCTGAAAGAGGAAGCACGAGGCGGAGTGAAA...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACGTTCCCCAGGAAGAGTaGAAAGATGCGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYVPQEE*KDASQL
Trigger: CAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAAC...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTTCGCCTGTGCTTCCTTaGGTATTGCTGGCCATCGAT +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGSPVLP*VLLAID
Trigger: ATCGATGGCCAGCAATACCCAAGGAAGCACAGGCGA...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTGCAGGGTGCAGGGGTaGTCGGGGGACACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMACRVQG*SGDTLV
Trigger: AACGAGAGTGTCCCCCGACCACCCCTGCACCCTGCA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CAGATTTCAGCCCCCATAATGAGAGTTGAGGCTGCTCAGATGCAATTCCCTATCTGCAGGGTGCAGGGGTaGTCGGGGGACACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QISAPIMRVEAAQMQFPICRVQG*SGDTLV
Trigger: AACGAGAGTGTCCCCCGACCACCCCTGCACCCTGCA...GATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCAATGCCCACCAGGCCTaGAGCATAGAAGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGNAHQA*SIEGAH
Trigger: ATGGGCTCCTTCTATGCTCCAGGCCTGGTGGGCATT...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCTCTCCATCCCCCTCCTaGTTAGGGAAGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGSPSPS*LGKLAE
Trigger: TTCTGCCAGCTTCCCTAACCAGGAGGGGGATGGAGA...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGGTGAGCCACCACTCCTaGCCAGACTTGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGVSHHS*PDLLLL
Trigger: TAACAACAACAAGTCTGGCCAGGAGTGGTGGCTCAC...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCGCTGTTGCAGAGTCCTaGACTGTGACTCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGAVAES*TVTPTL
Trigger: TAGGGTGGGAGTCACAGTCCAGGACTCTGCAACAGC...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 72 bp GAGAACCTTGGTTTGGTATGTGTGAAACTGGGGTACTaGAGGATCAGCCCTAGGGTCGAGGCTCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ENLGLVCVKLGY*RISPRVEAPWS
Trigger: ACTCCAGGGAGCCTCGACCCTAGGGCTGATCCTCAAGTACCCCAGTTTCACACATACCAAACCAAGGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 72 bp GTGGTGGCCATCTTTGGGCCTTCTGGTCCTGATTGGTaGGGTTACAGTGCCAGGATCCCTGTACTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VVAIFGPSGPDW*GYSARIPVLRF
Trigger: AAACCTCAGTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGATGGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACGAGAGCCCGCTTGCTTaGGGATCTCCTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYESPLA*GSPSQP
Trigger: AGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTC...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGGGTCCCCTCGGCTTTaGGAGCCCGCTTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHGSPRL*EPACLR
Trigger: CCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCTCCATCGGAGAAAGATaGAATACGATGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFSIGER*NTMPLK
Trigger: CTTCAGTGGCATCGTATTTCATCTTTCTCCGATGGA...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCCAGTGGGGAGGTCTCTaGGCACTCTTTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPQWGGL*ALFPEA
Trigger: AGCCTCTGGAAAGAGTGCTCAGAGACCTCCCCACTG...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACACTCAGAGACATGGGTaGGAGGGTCTCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYTQRHG*EGLWGP
Trigger: AGGGCCCCAGAGACCCTCTCACCCATGTCTCTGAGT...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACCATGGTCAGCAGCACTaGTGGGGTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYHGQQH*WGPAQA
Trigger: AGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATG...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATCTCCTGCGCCCTGTTTaGTTCCTCCGGGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHLLRPV*FLRGDP
Trigger: GGGGTCTCCCCGGAGGAAGCAAACAGGGCGCAGGAG...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAACTCGCAGGTCCTCTCTaGCTCGCCCCGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKLAGPL*LAPLLL
Trigger: GAGCAGGAGCGGGGCGAGGCAGAGAGGACCTGCGAG...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGACCTGGGTTTCTTCTaGCGCTTCGACTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFDLGFF*RFDFSS
Trigger: GGAGGAGAAGTCGAAGCGGCAGAAGAAACCCAGGTC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GAGACATGTACAGCACAGGTGCCTGAGCCAGAGATTCTGCCAGAGCATAGAAGGGCCACTTCAGTCCAGTaGGTGGGTGGTAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ETCTAQVPEPEILPEHRRATSVQ*VGGNSP
Trigger: TGGAGAATTACCACCCACGCACTGGACTGAAGTGGC...CCTTCTATGCTCTGGCAGAATCTCTGGCTCAGGCACCTGTGCTGTACATGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTAGGGTCTTGCTCTGTTaGTCAGGCTCATCTGAAACC +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGRVLLC*SGSSET
Trigger: GGTTTCAGATGAGCCTGAGCAACAGAGCAAGACCCT...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCACCCTACCTAGGCTCTaGCCTTGCCATCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFTLPRL*PCHQGL
Trigger: AAGGCCTTGATGGCAAGGGCAGAGCCTAGGTAGGGT...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAATTCAGGCCCTTTACCTaGTGGCTCATGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVREFRPFT*WLMVSS
Trigger: GCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAA...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGGGACAGAAAAATCCATaGCCTTTTCTTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGGQKNP*PFLPQP
Trigger: GGGCTGAGGAAGAAAAGGCCATGGATTTTTCTGTCC...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCTTAGCAAGCTTGAGGTaGACGTCATCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGLASLR*TSSIRA
Trigger: GGCCCTGATGGATGACGTCCACCTCAAGCTTGCTAA...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCTTGAACACGCGTTCATaGGGTACGTTGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSLNTRS*GTLLLI
Trigger: GATGAGCAGCAACGTACCCCATGAACGCGTGTTCAA...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTAGGGTCGAGGCTCCCTaGAGTCCTAGCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMARVEAP*SPSHQW
Trigger: CCACTGATGGCTAGGACTCCAGGGAGCCTCGACCCT...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTGAACACTCAGAGACATaGGTGAGAGGGTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLEHSET*VRGSLG
Trigger: CCCCAGAGACCCTCTCACCCATGTCTCTGAGTGTTC...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCTTTGGGGCTTGGACCTaGGTTCCATGGAAATCAGGC +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGFGAWT*VPWKSG
Trigger: GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAA...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTGGCCAGGTGTTGGTGTaGTGGCCATCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLGQVLV*WPSLGL
Trigger: AAGGCCCAAAGATGGCCACCACACCAACACCTGGCC...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCGAAATACGATGCCACTaGAGAACCAAAGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFEIRCH*RTKVTF
Trigger: GAAAGTCACTTTGGTTCTTCAGTGGCATCGTATTTC...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTAATCCCCACTCTCCATaGCTGGTCTTTGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGNPHSP*LVFGPF
Trigger: AAATGGACCAAAGACCAGTCATGGAGAGTGGGGATT...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAACTTTGCCTGACTTTCTaGGTCTGGGGGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRELCLTF*VWGILL
Trigger: CAGGAGAATCCCCCAGACTCAGAAAGTCAGGCAAAG...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACTGCCAGGGCTTTGCCTaGCTTTCTGAGTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYCQGFA*LSESGG
Trigger: TCCCCCAGACTCAGAAAGTCAGGCAAAGCCCTGGCA...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CAGATGCAATTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTGCAGGCTGGGCCAGTaGGGTGTTGTGGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: QMQFPINHWLSTGVCGPLCRLGQ*GVVEET
Trigger: TGTCTCTTCCACAACACCTCACTGGCCCAGCCTGCA...AAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCTCCCCTTCGCCTGTaGTTCCTTGGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPSPLRL*FLGYCW
Trigger: CCAGCAATACCCAAGGAAGCACAGGCGAAGGGGAGA...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCAAGATGCGTCCCAGCTaGCACTTCAGTCCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPKMRPS*HFSPVR
Trigger: ACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTT...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACATGGGGTACGTTGCTaGTCATCACCGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPEHGVRC*SSPPST
Trigger: AGTGCTGGGCGGTGATGAGCAGCAACGTACCCCATG...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACTTACCTGGTGGCTCATaGTCAGCAGCACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYLPGGS*SAALLG
Trigger: CCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAA...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCAGGCCCTTTACCTGGTaGCTCATGGTCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPRPFTW*LMVSST
Trigger: AGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCT...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTCCAAGGAGGATGACCTaGGTTTCTTCTGCCGCTTCG +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLPRRMT*VSSAAS
Trigger: CGAAGCGGCAGAAGAAACCCAGGTCATCCTCCTTGG...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCAGCACTGGAAGTACATaGAGGTCAGCAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPSTGST*RSAGAA
Trigger: TGCTGCGCCTGCTGACCTCCATGTACTTCCAGTGCT...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCCCACTGTGCCTGGCCTaGACCTTTCATTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGPLCLA*TFHLNQ
Trigger: CTGGTTTAAATGAAAGGTCCAGGCCAGGCACAGTGG...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCCCACTCTCCATGACTaGTCTTTGGTCCATTTACCT +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSPTLHD*SLVHLP
Trigger: AGGTAAATGGACCAAAGACCAGTCATGGAGAGTGGG...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCCTGTTTTGTGCTCCATaGTGTAAGCTTCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGLFCAP*CKLPLG
Trigger: GCCCAAGGGAAGCTTACACCATGGAGCACAAAACAG...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAATGTGTGCAAGATAGCTaGGCTGTTGCAGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRECVQDS*AVAESW
Trigger: CCAGGACTCTGCAACAGCCCAGCTATCTTGCACACA...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGGAGGCCAAGGAGGATaGCCTGGGTTTCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHGGQGG*PGFLLP
Trigger: CGGCAGAAGAAACCCAGGTCATCCTCCTTGGCCTCC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCGTACCTCTGGGATTATaGCTAGACCAAATATTAAGC +
Preference number: 4 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFVPLGL*LDQILS
Trigger: GCTTAATATTTGGTCTAGTCATAATCCCAGAGGTAC...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTGGATCGGGAGGCTTTaGACACGCGTTCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHWIGRL*TRVHGV
Trigger: TACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAAGGGTGGGAGGGACATaGTGGTGTAGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKRVGGT*WCRPPA
Trigger: TGCCGGTGGCCTACACCATCATGTCCCTCCCACCCT...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAGACAGAGCATGTATGTaGGAGGAAAGAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVREDRACM*EERGER
Trigger: TCTCTCCCCTCTTTCCTCTCACATACATGCTCTGTC...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGTGGGAGGTGGAGGCATaGGAATCGCTTGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: KPSTFPLISNSAYEGWARWEVEA*ESLEPG
Trigger: GCCAGGTTCAAGCGATTCTCATGCCTCCACCTCCCA...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CAGATGCAATTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTAAGATGCGTCCCAGCTaGCACTTCAGTCCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: QMQFPINHWLSTGVCGPLKMRPS*HFSPVR
Trigger: ACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTT...AAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCGGAAGAGTGCAAAGATaGGTCCCAGCTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPGRVQR*VPAATS
Trigger: TGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCC...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGCCAGAGACAACGCTCTaGATTGTACCTTTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGPETTL*IVPFAK
Trigger: TTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGG...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTTTGGTTGGGTTACAGTaGCAGGATCCCTGTACTGAG +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLLVGLQ*QDPCTE
Trigger: CTCAGTACAGGGATCCTGGCACTGTAACCCAACCAA...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTTCAGTCCAGTGCGTaGGTGGTAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPELQSSA*VVILQG
Trigger: GCCCTGGAGAATTACCACCCACGCACTGGACTGAAG...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTAATGCCCACCAGGCCTaGAGCATAGAAGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSNAHQA*SIEGAH
Trigger: ATGGGCTCCTTCTATGCTCCAGGCCTGGTGGGCATT...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAAAGCACTGGAAGTACATaGAGGTCAGCAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPESTGST*RSAGAA
Trigger: TGCTGCGCCTGCTGACCTCCATGTACTTCCAGTGCT...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGGGAAATCGTTTTCAATaGTCTCTTGGAGGACATCGT +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGGNRFQ*SLGGHR
Trigger: ACGATGTCCTCCAAGAGACCATTGAAAACGATTTCC...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTCATCAGCAGGATGGCTaGGATGATCAGGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLHQQDG*DDQAWI
Trigger: AATCCAGGCCTGATCATCCCAGCCATCCTGCTGATG...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGAGTTCAGGTAGTAAATaGCCAAGAACATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGSSGSK*PRTSAG
Trigger: TCCTGCTGATGTTCTTGGCCATTTACTACCTGAACT...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGCTGAATCTCTGGCTGTaGCTTTGCCTTTTACAGATT +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGLNLWL*LCLLQI
Trigger: AATCTGTAAAAGGCAAAGCCACAGCCAGAGATTCAG...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGCGCCTTCTTGTCCATaGCCTGGCTTTGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHAPSCP*PGFGWQ
Trigger: CTGCCAGCCAAAGCCAGGCCATGGACAAGAAGGCGC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTCTGCTTACCTGGGTCTaGGAGCACAGAGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMALLTWV*EHRVEE
Trigger: TTCCTCCACTCTGTGCTCCCAGACCCAGGTAAGCAG...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGATTTTGGAGAATTGCTaGGATCGCTTAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGILENC*DRLTTK
Trigger: CTTTGTGGTTAAGCGATCTCAGCAATTCTCCAAAAT...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGACAGAGTCCAGTGAGTaGTGTTCTTTATTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGTESSE*CSLLSL
Trigger: AAGAGACAATAAAGAACATCACTCACTGGACTCTGT...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTATCAAACTCAGCATATaGAGGAAATCCAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGIKLSI*RKSSLQ
Trigger: TTGGAGGCTGGATTTCCTTCATATGCTGAGTTTGAT...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTGGATCGGGAGGCTTTaGACACGCGTTCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSWIGRL*TRVHGV
Trigger: TACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCA...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTTCCCTCTTTGGGGCTaGTGTCCGCTCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHFPLWG*CPLLEG
Trigger: TCCTTCCAGGAGCGGACAGCAGCCCCAAAGAGGGAA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTGTAGCCATAGAAGAGTaGAGAGTACTTGATATAGCC +
Preference number: 4 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSVAIEE*RVLDIA
Trigger: GGCTATATCAAGTACTCTGCACTCTTCTATGGCTAC...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTCATGTACAGCACAGGTaGCTGAGCCAGAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSHVQHR*LSQRFC
Trigger: GCAGAATCTCTGGCTCAGGCACCTGTGCTGTACATG...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTACCTCAGCCACCCGATaGTCCTCTGGTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMATSATR*SSGCCS
Trigger: ACTACAACAACCAGAGGACCATCGGGTGGCTGAGGT...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTATTTTCTTCCTCAGCTaGGCATTAGCTCGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLIFFLS*ALARER
Trigger: CCTTTCCCGAGCTAATGCCCAGCTGAGGAAGAAAAT...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAACTTCACGGAGCACTTaGATTTTCTTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRETSRST*IFFLSW
Trigger: CCAGCTGAGGAAGAAAATCCAAGTGCTCCGTGAAGT...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAATGGCCTGGCTTTGGCTaGCAGAGGGAGGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKWPGFG*QREEWS
Trigger: AGACCACTCCTCCCTCTGCCAGCCAAAGCCAGGCCA...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACAGGCAGTTTTGGATTTaGGGCTTGGACCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYRQFWI*GLDLGS
Trigger: GGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCT...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTACACACAGGCAGTTTTaGATTTGGGGCTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLTHRQF*IWGLDL
Trigger: CAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTGT...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACCCTTCTGGTCCTGATTaGTTGGGTTACAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYPSGPD*LGYSAR
Trigger: CCTGGCACTGTAACCCAACCAATCAGGACCAGAAGG...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGCCAGTGACTGCAGGCTaGGCCAGTGAGGTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQPVTAG*ASEVLW
Trigger: CCACAACACCTCACTGGCCCAGCCTGCAGTCACTGG...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGCTCAACGGCCACAGGTaGCTGGTGGCTACTGAAATG +
Preference number: 4 (lower is better)
Translates to: KPSTFPLISNSAYEGWARLNGHR*LVATEM
Trigger: CATTTCAGTAGCCACCAGCCACCTGTGGCCGTTGAG...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CAA 72 bp AGGCATATGACACACAGGCAGTTTTGGATTTGGGGCTaGGACCTGGGTTCCATGGAAATCAGGCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: RHMTHRQFWIWG*DLGSMEIRHCN
Trigger: GTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTGTCATATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGTTAAACAGAGTCCAGTaGGTGATGTTCTTTATTGTC +
Preference number: 4 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGLNRVQ*VMFFIV
Trigger: GACAATAAAGAACATCACTCACTGGACTCTGTTTAA...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CAGATTTCAGCCCCCATAATGAGAGTTGAGGCTGCTCAGATGCAATTCCCTATCACCAGCAGTAGTTCATaGACCGCACAAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: QISAPIMRVEAAQMQFPITSSSS*TAQNKP
Trigger: GGGCTTGTTTTGTGCGGTTCATGAACTACTGCTGGT...GATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTTGGGGGAAGGCATATaGCACACAGGCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHLGEGI*HTGSFG
Trigger: TCCAAAACTGCCTGTGTGTCATATGCCTTCCCCCAA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTGGGCCTTCTGGTCCTaGTTGGTTGGGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHWAFWS*LVGLQC
Trigger: GCACTGTAACCCAACCAATCAGGACCAGAAGGCCCA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCATTACATGCACACCAGTaGCTGCAGGCTGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: AATWMEQEVIMLSEISQALHAHQ*LQAGPV
Trigger: CACTGGCCCAGCCTGCAGTCACTGGTGTGCATGTAA...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTAGGCATATAGTTGCTTaGCTTTCCCCTTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLRHIVA*LSPFPR
Trigger: CCTTGGGAAAGGGGAAAGGCAAGCAACTATATGCCT...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCGGAAGAGTGCAAAGATaGGTCCCAGCTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSGRVQR*VPAATS
Trigger: TGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCC...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAACATGGGGTACGTTGCTaGTCATCACCGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKHGVRC*SSPPST
Trigger: AGTGCTGGGCGGTGATGAGCAGCAACGTACCCCATG...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTAGGAATCAAAGTTCATaGATTCCAAGAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGRNQSS*IPREET
Trigger: TGTCTCCTCTCTTGGAATGCATGAACTTTGATTCCT...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTTGCCCAGACTGGAGTaGAGTGACGTGATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMALPRLE*SDVILA
Trigger: AGCTAAGATCACGTCACTGCACTCCAGTCTGGGCAA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CAGATGCAATTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTCTGAGCCAGAGATTCTaGCAGAGCATAGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: QMQFPINHWLSTGVCGPLLSQRF*QSIEGH
Trigger: GTGTCCTTCTATGCTCTGGCAGAATCTCTGGCTCAG...AAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTCTCCAGGGCAGCGATaGTTTCAAACAGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHSPGQR*FQTEGD
Trigger: GTCCCCCTCTGTTTGAAACCATCGCTGCCCTGGAGA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTCTTGCCCAGGAAGGTTaGGAAATCGTTTTCAATGGT +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLLAQEG*EIVFNG
Trigger: ACCATTGAAAACGATTTCCCAACCTTCCTGGGCAAG...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTGGGATGATCAGGCCTaGATTGGCGAGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHWDDQA*IGEESK
Trigger: TTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGTTCCCTATCAACCATTaGCTCAGTACTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FPINHWLSTGVCGPLSPRFPINH*LSTGVC
Trigger: ACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA...CCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTGCCAGTGAGGTGTTGTaGAAGAGACATGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTASEVL*KRHVQH
Trigger: GTGCTGTACATGTCTCTTCCACAACACCTCACTGGC...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCGACTTTCAATGTCCTTaGTCTTCATTTCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPDFQCP*SSFPRG
Trigger: TCCCCTGGGAAATGAAGATCAAGGACATTGAAAGTC...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCCCCAGCAGGATGGTaGTGTACGTTACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LKASSRRQDQWLLCSWCVPPAGW*CTLPAC
Trigger: ACATGCTGGTAACGTACATCACCATCCTGCTGGGGG...AACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCAGGAGAGATTGGTGTaGAATAATTTATCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGQERLV*NNLSCF
Trigger: GAAACAGGATAAATTATTTCACACCAATCTCTCCTG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTTGTGCGGAATGTCCATaGAGTGGTGACCTACAAATC +
Preference number: 4 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTCAECP*SGDLQI
Trigger: GATTTGTAGGTCACCACTTCATGGACATTCCGCACA...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACCCCATAATGAGAGTTaGGGCTGCTCAGATGCAATT +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPEPHNES*GCSDAI
Trigger: AATTGCATCTGAGCAGCCTCAACTCTCATTATGGGG...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAATGTTCCAGGACTTCCTaGAATATTCGCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPECSRTS*NIRLHC
Trigger: ACAGTGGAGGCGAATATTTCAGGAAGTCCTGGAACA...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGTACAGCACAGGTGCCTaGGCCAGAGATTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQYSTGA*ARDSAR
Trigger: TCTGGCAGAATCTCTGGCTCAGGCACCTGTGCTGTA...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGTGGGCCAGGCCAGGATaGGGGATACATAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQWARPG*GIHRST
Trigger: TGTTGACCTATGTATCCCTCATCCTGGCCTGGCCCA...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTGGTGGCTACTGAAATaGACAGCGCAGACACAGAAC +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSWWLLK*TAQTQN
Trigger: GTTCTGTGTCTGCGCTGTTCATTTCAGTAGCCACCA...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGGGCATGAGAATCGCTTaGACCTGGCAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQGMRIA*TWQAEV
Trigger: AACCTCTGCCTGCCAGGTTCAAGCGATTCTCATGCC...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGGGCAAGTGGATTGTTTaGGGCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQGKWIV*GQEFKA
Trigger: GGCCTTGAACTCCTGGCCTCAAACAATCCACTTGCC...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GAGACATGTACAGCACAGGTGCCTGAGCCAGAGATTCTGCCAGAGCATAGAAGGAGCACAGCAGGGAGATaGCAGTTAACAATAATTCAT +
Preference number: 4 (lower is better)
Translates to: ETCTAQVPEPEILPEHRRSTAGR*QLTIIH
Trigger: ATGAATTATTGTTAACTGTCATCTCCCTGCTGTGCT...CCTTCTATGCTCTGGCAGAATCTCTGGCTCAGGCACCTGTGCTGTACATGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTACTCCCATAGGGCATaGCCATCAGTACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHYSHRA*PSVPLG
Trigger: TCCCAGAGGTACTGATGGGCATGCCCTATGGGAGTA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGTGATCTTAGCTAACTaGAACCTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHVILAN*NLCLLG
Trigger: GCCCAGGAGGCAGAGGTTGCAGTTAGCTAAGATCAC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCTGCATTGTACCTTTTaGAAAACTCTTCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGLHCTF*KTLQRN
Trigger: GTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGGTTGAAATTCCTTTGTaGGGAATGTCCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FPINHWLSTGVCGPLSPRVEIPL*GMSMKW
Trigger: CCACTTCATGGACATTCCGCACAAAGGAATTTCAAC...CCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCTGGCAGGCAGAGGTTaGAGTAAGCTGAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LKASSRRQDQWLLCSWCVLAGRG*SKLRWH
Trigger: GTGCCATCTCAGCTTACTGCAACCTCTGCCTGCCAG...AACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTCTCGGGAAAGGCTTTTaGAAACTGAGTTCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLLGKGF*KLSSGS
Trigger: ACTACCTGAACTCAGTTTCCAAAAGCCTTTCCCGAG...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCGAGGGGAGAGAACCTTaGTTTGGTATGTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPEGREP*FGMCET
Trigger: AGTTTCACACATACCAAACCAAGGTTCTCTCCCCTC...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATAAAAGTCTACGAGGGTaGTCATGGCCCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHKSLRG*SWPFPN
Trigger: GTTGGGGAAGGGCCATGACCACCCTCGTAGACTTTT...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCCTAAACTGTATCCCATaGAAAAAGTCTACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHCLPPSVADKGLKESKFLNCIP*KKSTRV
Trigger: CACCCTCGTAGACTTTTTCCATGGGATACAGTTTAG...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCGTGAAGTTTTGGTGCTaGATTGAGAAGGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPVKFWC*IEKGRD
Trigger: ATCCCTTCCCTTCTCAATCCAGCACCAAAACTTCAC...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACTCAGGTAGGTTAGCTTaGGGGAAGGCATATGACACA +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYSGRLA*GKAYDT
Trigger: TGTGTCATATGCCTTCCCCCAAGCTAACCTACCTGA...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATCTGGTCCTGATTGGTTaGGTTACAGTGCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHLVLIG*VTVPGS
Trigger: GGATCCTGGCACTGTAACCCAACCAATCAGGACCAG...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTTGTATTAGTAACCAGTaGAGGCCTGACAGTAATCAC +
Preference number: 4 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLCISNQ*RPDSNH
Trigger: GTGATTACTGTCAGGCCTCCACTGGTTACTAATACA...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCCATTGTTCATTACACTaGGAAAAAGCAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSHCSLH*EKAVSL
Trigger: AAGGGAAACTGCTTTTTCCCAGTGTAATGAACAATG...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTTGGCCTTTTACAGGCTaGCATGAAACCAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSWPFTG*HETRTG
Trigger: TCCAGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCA...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTTCACCCAAAGTTCCATaGCCTTTTACAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTSPKVP*PFTGWH
Trigger: ATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGA...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAGTTCAAGGCCAGCCTaGGCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQSSRPA*ATWQNP
Trigger: GGGGTTTTGCCATGTTGCCCAGGCTGGCCTTGAACT...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAACTGAAGAACCAAAGTaGCTTTCAATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRETEEPK*LSMSLI
Trigger: GATCAAGGACATTGAAAGTCACTTTGGTTCTTCAGT...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATAGAGTGCAGAGTACTTaGTATAGCCCTCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHRVQST*YSPQNP
Trigger: GGGATTTTGAGGGCTATATCAAGTACTCTGCACTCT...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTTGTTCATCCACTATTaGTTCCTTGAAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPLFIHY*FLEAGG
Trigger: ACCACCAGCTTCAAGGAATCAATAGTGGATGAACAA...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TTAGATAGAGGGAAGAAGTCCCAGTGTTCCATAGCACAGCAGGGAGATGACAGTCTTAAATGGCATCGGTaGTTCACCCAAAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: LDRGKKSQCSIAQQGDDSLKWHR*FTQSSM
Trigger: CATGGAACTTTGGGTGAATCACCGATGCCATTTAAG...ACTGTCATCTCCCTGCTGTGCTATGGAACACTGGGACTTCTTCCCTCTATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAGCCACTTCAGTCCAGTaGGTGGGTGGTAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKATSVQ*VGGNSP
Trigger: TGGAGAATTACCACCCACGCACTGGACTGAAGTGGC...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAACTTGGTCTCCCAAAGTaGTGGGACTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKLGLPK*WDYRCE
Trigger: CTCACACCTGTAGTCCCAGCACTTTGGGAGACCAAG...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTGGTAGGTACCTTACATaGACACCAGTGACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKASSRRQDQWLLCSWCVGRYLT*TPVTAG
Trigger: GCCTGCAGTCACTGGTGTGCATGTAAGGTACCTACC...AACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGTTAGCAAGCTTGAGGTaGACGTCATCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQLASLR*TSSIRA
Trigger: GGCCCTGATGGATGACGTCCACCTCAAGCTTGCTAA...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTATCCAGATCATTCCTTaGTTGAAGATCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLIQIIP*LKIKPS
Trigger: GCTGGGTTTGATCTTCAACCAAGGAATGATCTGGAT...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTATCCAGATCATTCCTTaGTTGAAGATCAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: NFLSSSFQALNGHRWLVAIQIIP*LKIKPS
Trigger: GCTGGGTTTGATCTTCAACCAAGGAATGATCTGGAT...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACTGTCCTCTGAATCTCTaGCTGTGGCTTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYCPLNL*LWLCLL
Trigger: TAAAAGGCAAAGCCACAGCCAGAGATTCAGAGGACA...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTTGGTGAGTTGGAGCTaGGTGGCATTTTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHLVSWS*VAFLEL
Trigger: CAGCTCCAAAAATGCCACCCAGCTCCAACTCACCAA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATCCAGCTCACTTCCTCTaGATTGAGAAATGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHPAHFL*IEKCRP
Trigger: GGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGG...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTCAGATCAGGATGGTTaGTTTGTGTTTGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMASDQDG*FVFVVG
Trigger: ACCCACCACAAACACAAACCAACCATCCTGATCTGA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTCCTTTCATACCAGCTaGCATTCTGCATTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMASFHTS*HSAFWR
Trigger: TCTCCAAAATGCAGAATGTCAGCTGGTATGAAAGGA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTAGATCATTCCTTGGTTaGAGATCAAACCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMARSFLG*RSNPAH
Trigger: ATGTGCTGGGTTTGATCTTCAACCAAGGAATGATCT...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp TCGGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAATTGAGGCTGCTCAGATaGAATTCCCTATCAACCATT +
Preference number: 4 (lower is better)
Translates to: SVIHPKFHGLLQAGMKPELRLLR*NSLSTI
Trigger: AATGGTTGATAGGGAATTGCATCTGAGCAGCCTCAA...TTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAATTGAACACGCGTTCATaGGGTACGTTGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKLNTRS*GTLLLI
Trigger: GATGAGCAGCAACGTACCCCATGAACGCGTGTTCAA...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAACTTGCCAGGAGAGATTaGTGTGAAATAATTTATCCT +
Preference number: 4 (lower is better)
Translates to: FLWIEKCRPFSIPLLVRELARRD*CEIIYP
Trigger: AGGATAAATTATTTCACACCAATCTCTCCTGGCAAG...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp GGTGATTCACCCAAAGTTCCATGGCCTTTTACAGGCTGGCATGAAACCAGAACTATTTTGGAGAATTGCTaGGATCGCTTAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: GDSPKVPWPFTGWHETRTILENC*DRLTTK
Trigger: CTTTGTGGTTAAGCGATCTCAGCAATTCTCCAAAAT...AGTTCTGGTTTCATGCCAGCCTGTAAAAGGCCATGGAACTTTGGGTGAATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTCCTTTCATACCAGCTaGCATTCTGCATTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSSFHTS*HSAFWR
Trigger: TCTCCAAAATGCAGAATGTCAGCTGGTATGAAAGGA...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp CAGATTTCAGCCCCCATAATGAGAGTTGAGGCTGCTCAGATGCAATTCCCTATCACAGAGTCCAGTGAGTaGTGTTCTTTATTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QISAPIMRVEAAQMQFPITESSE*CSLLSL
Trigger: AAGAGACAATAAAGAACATCACTCACTGGACTCTGT...GATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCAGATCATTCCTTGGTTaGAGATCAAACCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSRSFLG*RSNPAH
Trigger: ATGTGCTGGGTTTGATCTTCAACCAAGGAATGATCT...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCAGAGAGTAGAATGAGGTaGTCAGAGGTTGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AATWMEQEVIMLSEISQAESRMR*SEVGKD
Trigger: ATCCTTCCCAACCTCTGATCACCTCATTCTACTCTC...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTAGTCATTATGTTAAGTaGAATAAGCCAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: NFLSSSFQALNGHRWLVASHYVK*NKPGTE
Trigger: TTCTGTGCCTGGCTTATTTCACTTAACATAATGACT...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATCTCTGGCTGTGGCTTTaGCTTTTACAGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHLWLWL*LLQICD
Trigger: GTCACAAATCTGTAAAAGGCAAAGCCACAGCCAGAG...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACATGGAAATCAGGCATTaGAACATCTTCGTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYMEIRH*NIFVSL
Trigger: AAGGCTAACGAAGATGTTGCAATGCCTGATTTCCAT...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTTTTCAATGGTCTCTTaGAGGACATCGTACATTCTG +
Preference number: 4 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHFSMVS*RTSYIL
Trigger: CAGAATGTACGATGTCCTCCAAGAGACCATTGAAAA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAATCTTCCTTGGTGAGTTaGAGCTGGGTGGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKSSLVS*SWVAFL
Trigger: CAAAAATGCCACCCAGCTCCAACTCACCAAGGAAGA...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTTGATGAGGTTAAGGTaGCTGACTCTCTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMALMRLR*LTLFRT
Trigger: TGTTCTAAAGAGAGTCAGCCACCTTAACCTCATCAA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR TCA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTTATGCAGCATTAGATaGCATATACATTCCGTCACA +
Preference number: 4 (lower is better)
Translates to: CVLVTSGGLTVITRGPMALCSIR*HIHSVT
Trigger: TGTGACGGAATGTATATGTCATCTAATGCTGCATAA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR GCA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATGCTGGTGGTGATGGATaGATATTTGTTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHAGGDG*IFVISC
Trigger: ACAGCTGATAACAAATATGCATCCATCACCACCAGC...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 72 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATaGTGTTCTTGGTGTGTTCCAGGACTTCCTGAAATA +
Preference number: 4 (lower is better)
Translates to: LKASSRRQDQWL*CSWCVPGLPEI
Trigger: TATTTCAGGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp ATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTCCAGGACTTCCTTAAACAGAGTCCAGTaGGTGATGTTCTTTATTGTC +
Preference number: 4 (lower is better)
Translates to: IQKTGPMVIVFLVCSRTSLNRVQ*VMFFIV
Trigger: GACAATAAAGAACATCACTCACTGGACTCTGTTTAA...GGAAGTCCTGGAACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GCAGCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCAAGAAGACAGGACCAATaGTTATTGTGTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AATWMEQEVIMLSEISQARRQDQ*LLCSWC
Trigger: ACACCAAGAACACAATAACCATTGGTCCTGTCTTCT...TGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp CTCAAAGCATCATCCAGAAGACAGGACCAATGGTTATTGTGTTCTTGGTGTGTTTTGCAGCAACATGGATaGAACAGGAAGTCATTATGT +
Preference number: 4 (lower is better)
Translates to: LKASSRRQDQWLLCSWCVLQQHG*NRKSLC
Trigger: ACATAATGACTTCCTGTTCCATCCATGTTGCTGCAA...AACACACCAAGAACACAATAACCATTGGTCCTGTCTTCTGGATGATGCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR TCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAATAAATGTTTGATGTaGTGGATATCCCAGTTACCC +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQNKCLM*WISQLP
Trigger: GGGTAACTGGGATATCCATCACATCAAACATTTATT...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CCA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAATACAAAAATTAGTTaGGCATTGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQNTKIS*ALWCMP
Trigger: AGGCATGCACCACAATGCCCAACTAATTTTTGTATT...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
3UTR CAA 72 bp ATTACACTTCATCAGATCAGGATGGTTGGTTTGTGTTaGTGGTGGGTATTTATGTGTATTAGTAACCAGTGG +
Preference number: 4 (lower is better)
Translates to: ITLHQIRMVGLC*WWVFMCISNQW
Trigger: CCACTGGTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
3UTR CAA 72 bp CATAAAATTACACTTCATCAGATCAGGATGGTTGGTTaGTGTTTGTGGTGGGTATTTATGTGTATTAGTAAC +
Preference number: 4 (lower is better)
Translates to: HKITLHQIRMVG*CLWWVFMCISN
Trigger: GTTACTAATACACATAAATACCCACCACAAACACAAACCAACCATCCTGATCTGATGAAGTGTAATTTTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS TCA 90 bp TCCGCGCCTGCCTGGGGTCCCCTCGGCTTTGAGAGCCCGCTTGCTTaGGGATCTCCTTCCCAGCCTGTCACCTGTGTGTGGAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: SAPAWGPLGFESPLA*GSPSQPVTCVWRAA
Trigger: AGCGGCTCTCCACACACAGGTGACAGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCCCAGGCAGGCGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS TCA 90 bp TCTGGCTTCGCTGAGCTCCGCGCCTGCCTGGGGTCCCCTCGGCTTTaGGAGCCCGCTTGCTTGAGGATCTCCTTCCCAGCCTGTCACCTG +
Preference number: 5 (lower is better)
Translates to: SGFAELRACLGSPRL*EPACLRISFPACHL
Trigger: CAGGTGACAGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCCCAGGCAGGCGCGGAGCTCAGCGAAGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS CCA 90 bp CTCCGCCTCGTGCTTCCTCTTTCAGGCCCTTTACCTGGTGGCTCATaGTCAGCAGCACTGCTGGGGTCCTGCACAGGCTCACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LRLVLPLSGPLPGGS*SAALLGSCTGSRSV
Trigger: CACGCTGCGTGAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCACGAGGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp CTCCTCGGAATCTCCTTTTCCCTCTTTGGGGCTGCTGTCCGCTCCTaGAAGGAGGCCCTCTCGTCGCGCTTTCTCCTGCCCTCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LLGISFSLFGAAVRS*KEALSSRFLLPSQV
Trigger: GACCTGCGAGGGCAGGAGAAAGCGCGACGAGAGGGCCTCCTTCCAGGAGCGGACAGCAGCCCCAAAGAGGGAAAAGGAGATTCCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS CCA 90 bp CGCCCTTTCACTCCGCCTCGTGCTTCCTCTTTCAGGCCCTTTACCTaGTGGCTCATGGTCAGCAGCACTGCTGGGGTCCTGCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: RPFTPPRASSFRPFT*WLMVSSTAGVLHRL
Trigger: GAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCACGAGGCGGAGTGAAAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp CCTTTCACTCCGCCTCGTGCTTCCTCTTTCAGGCCCTTTACCTGGTaGCTCATGGTCAGCAGCACTGCTGGGGTCCTGCACAGGCTCACG +
Preference number: 5 (lower is better)
Translates to: PFTPPRASSFRPFTW*LMVSSTAGVLHRLT
Trigger: CGTGAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCACGAGGCGGAGTGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp GAAGAGTGCAAAGATGCGTCCCAGCTGCCACTTCAGTCCAGTGCGTaGGTGGTAATTCTCCAGGGCAGCGATGGTTTCAAACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: EECKDASQLPLQSSA*VVILQGSDGFKQRG
Trigger: CCCCCTCTGTTTGAAACCATCGCTGCCCTGGAGAATTACCACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS-3UTR CAA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTGGGCCCTGCGCCTTCTaGTCCATGGCCTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLGPCAF*SMAWLW
Trigger: CCAAAGCCAGGCCATGGACAAGAAGGCGCAGGGCCC...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CCTAGGCTCTGCCCTTGCCATCAAGGCCTTCTTAATGGTCTGGCCCCTGGCTTCGACACACAGGCAGTTTaGGATTTGGGGCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: PRLCPCHQGLLNGLAPGFDTQAV*DLGLGP
Trigger: AGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTGTC...GAAGCCAGGGGCCAGACCATTAAGAAGGCCTTGATGGCAAGGGCAGAGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CTGCCTCGGGAGGGGAGGTGCTCCCGGGCAACTGAGACTCTGCACCTGAACGGCATAGTTGAAATTCCTTaGTGCGGAATGTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: LPREGRCSRATETLHLNGIVEIP*CGMSMK
Trigger: CTTCATGGACATTCCGCACAAAGGAATTTCAACTAT...GCCGTTCAGGTGCAGAGTCTCAGTTGCCCGGGAGCACCTCCCCTCCCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS GCA 90 bp CCAGGAAGAGTGCAAAGATGCGTCCCAGCTGCCACTTCAGTCCAGTaGGTGGGTGGTAATTCTCCAGGGCAGCGATGGTTTCAAACAGAG +
Preference number: 5 (lower is better)
Translates to: PGRVQRCVPAATSVQ*VGGNSPGQRWFQTE
Trigger: CTCTGTTTGAAACCATCGCTGCCCTGGAGAATTACCACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS GCA 90 bp ATCCATCAGGGCCAAGAGAAATGTGTAGAGGTTCCCCAGGAAGAGTaGAAAGATGCGTCCCAGCTGCCACTTCAGTCCAGTGCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: IHQGQEKCVEVPQEE*KDASQLPLQSSAWV
Trigger: CACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAACCTCTACACATTTCTCTTGGCCCTGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS-3UTR CAA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACGCTTTGAGAGCCCGCTaGCTTGAGGATCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYALRAR*LEDLLP
Trigger: GGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGC...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCATTGCAACATTCTCCTGCGCCCTGTTaGCTTCCTCCGGGGAGACCC +
Preference number: 5 (lower is better)
Translates to: VLDLGLGPGFHGNQALQHSPAPC*LPPGRP
Trigger: GGGTCTCCCCGGAGGAAGCAAACAGGGCGCAGGAGA...ATGTTGCAATGCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCAGGCAGTTTTGGATTaGGGGCTTGGACCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSQAVLD*GLGPGF
Trigger: GAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTG...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGTCTGGTCCTGATTGGTaGGGTTACAGTGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGSGPDW*GYSARI
Trigger: GATCCTGGCACTGTAACCCAACCAATCAGGACCAGA...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS GCA 90 bp GGGCCAAGAGAAATGTGTAGAGGTTCCCCAGGAAGAGTGCAAAGATaGGTCCCAGCTGCCACTTCAGTCCAGTGCGTGGGTGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: GPREMCRGSPGRVQR*VPAATSVQCVGGNS
Trigger: AGAATTACCACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAACCTCTACACATTTCTCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS-3UTR CAA 90 bp TCTTTGGGCCTTCTGGTCCTGATTGGTTGGGTTACAGTGCCAGGATCCCTGTACTTGGATCGGGAGGCTTaGAACACGCGTTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: SLGLLVLIGWVTVPGSLYLDREA*NTRSWG
Trigger: ACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCAA...GTACAGGGATCCTGGCACTGTAACCCAACCAATCAGGACCAGAAGGCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCCTGGTTAGGGAAGGAGTGGTCTCTTCCTaGGTGAGTTGGAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: FLWIEKCRPFSIPLLVREGVVSS*VSWSWV
Trigger: CACCCAGCTCCAACTCACCAAGGAAGAGACCACTCC...TTCCCTAACCAGGAGGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTTGGGGTTTCGCCACATaGCCCGGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLWGFAT*PGLVLN
Trigger: GTTCAAGACCAGCCCGGGCAATGTGGCGAAACCCCA...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp GCCACTTCAGTCCAGTGCGTGGGTGGTAATTCTCCAGGGCAGCGATaGTTTCAAACAGAGGGGGACAAAACATTCCAAGCAGGGACATCA +
Preference number: 5 (lower is better)
Translates to: ATSVQCVGGNSPGQR*FQTEGDKTFQAGTS
Trigger: TGATGTCCCTGCTTGGAATGTTTTGTCCCCCTCTGTTTGAAACCATCGCTGCCCTGGAGAATTACCACCCACGCACTGGACTGAAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS-3UTR CAA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGTGAAACTGGGGTACTaGAGGATCAGCCCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: SHCLPPSVADKGLKESKFVKLGY*RISPRV
Trigger: GACCCTAGGGCTGATCCTCAAGTACCCCAGTTTCAC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGTCTGAACCAAGATATTaGGGAGGGCAGTTAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGSEPRY*GGQLVQ
Trigger: CTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGA...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CACTCCCTGTTTTGTGCTCCATGGTGTAAGCTTCCCTTGGGCTGGGTACTGGGGAGTTTTGGTGCTGGATaGAGAAGGGAAGGGATTTGG +
Preference number: 5 (lower is better)
Translates to: HSLFCAPWCKLPLGWVLGSFGAG*RREGIW
Trigger: CCAAATCCCTTCCCTTCTCAATCCAGCACCAAAACT...CCCCAGTACCCAGCCCAAGGGAAGCTTACACCATGGAGCACAAAACAGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp GTAAATGGCCAAGAACATCAGCAGGATGGCTGGGATGATCAGGCCTaGATTGGCGAGGAAAGCAAAGATCTTGCCCAGGAAGGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: VNGQEHQQDGWDDQA*IGEESKDLAQEGWE
Trigger: TTCCCAACCTTCCTGGGCAAGATCTTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGCTGATGTTCTTGGCCATTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCGTGCTTCCTTGGGTATaGCTGGCCATCGATCGAATG +
Preference number: 5 (lower is better)
Translates to: SHCLPPSVADKGLKESKFVLPWV*LAIDRM
Trigger: CATTCGATCGATGGCCAGCAATACCCAAGGAAGCAC...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTTCTTCATTAGCAAGCTaGAGGTGGACGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGSSLAS*RWTSSI
Trigger: GATGGATGACGTCCACCTCAAGCTTGCTAATGAAGA...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GGCCAGGATGAGGGATACATAGGTCAACATCCTACGGAGCCTTTCACCAGGAGCTCTTCATTAGCAAGCTaGAGGTGGACGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: GQDEGYIGQHPTEPFTRSSSLAS*RWTSSI
Trigger: GATGGATGACGTCCACCTCAAGCTTGCTAATGAAGA...GCTCCTGGTGAAAGGCTCCGTAGGATGTTGACCTATGTATCCCTCATCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTCTCACTTCCTCTGGATaGAGAAATGTAGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGLTSSG*RNVGPS
Trigger: AGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAG...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS TCA 90 bp AGTTCAGGTAGTAAATGGCCAAGAACATCAGCAGGATGGCTGGGATaGTCAGGCCTGGATTGGCGAGGAAAGCAAAGATCTTGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSGSKWPRTSAGWLG*SGLDWRGKQRSCPG
Trigger: TCCTGGGCAAGATCTTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGCTGATGTTCTTGGCCATTTACTACCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTTCGCCTGTGCTTCCTaGGGTATTGCTGGCCATCGA +
Preference number: 5 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAFACAS*GIAGHR
Trigger: TCGATGGCCAGCAATACCCAAGGAAGCACAGGCGAA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTAAGCTGAATGTGAAGTaGTCACTCTCCCCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLKLNVK*SLSPSP
Trigger: AGGCGAAGGGGAGAGTGACAACTTCACATTCAGCTT...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTTCCACTATTGATTCCTaGAAGCTGGTGGTGATGGAT +
Preference number: 5 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGSTIDS*KLVVMD
Trigger: ATCCATCACCACCAGCTTCAAGGAATCAATAGTGGA...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTCTCTTCCTTGGTGAGTaGGAGCTGGGTGGCATTTTT +
Preference number: 5 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLLFLGE*ELGGIF
Trigger: AAAAATGCCACCCAGCTCCAACTCACCAAGGAAGAG...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CAGATGCAATTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTGTAGTCCCAGCTACTaGGGAGGTGGAGGCATGAGA +
Preference number: 5 (lower is better)
Translates to: QMQFPINHWLSTGVCGPLCSPSY*GGGGMR
Trigger: TCTCATGCCTCCACCTCCCAAGTAGCTGGGACTACA...AAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAATTGCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp CCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAACTCTTCAGAGAAACCATTCTCCTTTTCCCTCTTaGGGGCTGCTGTCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PRDNALHCTFCKTLQRNHSPFPS*GLLSAP
Trigger: AGGAGCGGACAGCAGCCCCAAAGAGGGAAAAGGAGA...ATGGTTTCTCTGAAGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCCATCCAGATCATTCCTaGGTTGAAGATCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGHPDHS*VEDQTQ
Trigger: CTGGGTTTGATCTTCAACCAAGGAATGATCTGGATG...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGTTGGATCGGGAGGCTTaGAACACGCGTTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: KPSTFPLISNSAYEGWARLDREA*NTRSWG
Trigger: ACCCCATGAACGCGTGTTCAAAGCCTCCCGATCCAA...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp GGGCCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTGTTTTCAATGGTCTCTaGGAGGACATCGTACATTCT +
Preference number: 5 (lower is better)
Translates to: GPGWVVAVTVDEVKVADSVFNGL*EDIVHS
Trigger: AGAATGTACGATGTCCTCCAAGAGACCATTGAAAAC...AGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTAACTTCACGGAGCACTaGGATTTTCTTCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLNFTEH*DFLPQL
Trigger: CAGCTGAGGAAGAAAATCCAAGTGCTCCGTGAAGTT...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CACACAGGCAGTTTTGGATTTGGGGCTTGGACCTGGGTTCCATGGAAATCAGGCGAGAAGGGAAGGGATTaGGGAGGGAAGTTAGAAATT +
Preference number: 5 (lower is better)
Translates to: HTGSFGFGAWTWVPWKSGEKGRD*GGKLEI
Trigger: AATTTCTAACTTCCCTCCCAAATCCCTTCCCTTCTC...GCCTGATTTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAACTGCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTTTTTGGATTTGGGGCTaGGACCTGGGTTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLFWIWG*DLGSME
Trigger: TTCCATGGAACCCAGGTCCAAGCCCCAAATCCAAAA...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGATTCCCTATCAACCATaGGCTCAGTACTGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: FPINHWLSTGVCGPLSPRIPYQP*AQYWSV
Trigger: CACACTCCAGTACTGAGCCAATGGTTGATAGGGAAT...CCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp CAGATTTCAGCCCCCATAATGAGAGTTGAGGCTGCTCAGATGCAATTCCCTATCTGGGCCAGTGAGGTGTaGTGGAAGAGACATGTACAG +
Preference number: 5 (lower is better)
Translates to: QISAPIMRVEAAQMQFPIWASEV*WKRHVQ
Trigger: CTGTACATGTCTCTTCCACAACACCTCACTGGCCCA...GATAGGGAATTGCATCTGAGCAGCCTCAACTCTCATTATGGGGGCTGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS TCA 90 bp TTTCTTCCTCAGCTGGGCATTAGCTCGGGAAAGGCTTTTGGAAACTaGGTTCAGGTAGTAAATGGCCAAGAACATCAGCAGGATGGCTGG +
Preference number: 5 (lower is better)
Translates to: FLPQLGISSGKAFGN*VQVVNGQEHQQDGW
Trigger: CCAGCCATCCTGCTGATGTTCTTGGCCATTTACTACCTGAACTCAGTTTCCAAAAGCCTTTCCCGAGCTAATGCCCAGCTGAGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 90 bp CAGGCCTGGATTGGCGAGGAAAGCAAAGATCTTGCCCAGGAAGGTTaGGAAATCGTTTTCAATGGTCTCTTGGAGGACATCGTACATTCT +
Preference number: 5 (lower is better)
Translates to: QAWIGEESKDLAQEG*EIVFNGLLEDIVHS
Trigger: AGAATGTACGATGTCCTCCAAGAGACCATTGAAAACGATTTCCCAACCTTCCTGGGCAAGATCTTTGCTTTCCTCGCCAATCCAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GATGGCTCCAGCTTCCCTAAAGGACAGGTGAAGCCACTGTCTTCCTCCTTCGGTAAGTCTCTCTTAAATTaGACCCATTTCTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: DGSSFPKGQVKPLSSSFGKSLLN*THFLAI
Trigger: GATGGCCAAGAAATGGGTCAAATTTAAGAGAGACTT...ACCGAAGGAGGAAGACAGTGGCTTCACCTGTCCTTTAGGGAAGCTGGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp CCTGGTTGGGTGGTGGCTGTAACAGTTGATGAGGTTAAGGTGGCTGACTCTCTTCAGCTGGTGAACATCTaGAAGCTGAATGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PGWVVAVTVDEVKVADSLQLVNI*KLNVKL
Trigger: CAACTTCACATTCAGCTTCAAGATGTTCACCAGCTG...AAGAGAGTCAGCCACCTTAACCTCATCAACTGTTACAGCCACCACCCAACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCTCTTGCCCAGGAAGGTaGGGAAATCGTTTTCAATGG +
Preference number: 5 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPSCPGR*GNRFQW
Trigger: CCATTGAAAACGATTTCCCAACCTTCCTGGGCAAGA...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AGGGAAGCTGGCAGAAACCCGTGTCCTAAACTGTATCCCATGGAAAAAGTCTACACATCTTCGTTAGCCTaGCCAGGAGAGATTGGTGTG +
Preference number: 5 (lower is better)
Translates to: REAGRNPCPKLYPMEKVYTSSLA*PGEIGV
Trigger: CACACCAATCTCTCCTGGCAAGGCTAACGAAGATGT...GTAGACTTTTTCCATGGGATACAGTTTAGGACACGGGTTTCTGCCAGCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TTCCCTATCAACCATTGGCTCAGTACTGGAGTGTGTGGTCCACTTTCCCCTAGGCAGGACCAATGGTTATaGTGTTCTTGGTGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: FPINHWLSTGVCGPLSPRQDQWL*CSWCVP
Trigger: TGGAACACACCAAGAACACAATAACCATTGGTCCTG...CCTAGGGGAAAGTGGACCACACACTCCAGTACTGAGCCAATGGTTGATAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp CTGTCTGAACCAAGATATTTGGGAGGGCAGTTAGTGCAGAGATGGCTCCAGCTTCTGCATTTTGGAGAATaGCTGAGATCGCTTAACCAC +
Preference number: 5 (lower is better)
Translates to: LSEPRYLGGQLVQRWLQLLHFGE*LRSLNH
Trigger: GTGGTTAAGCGATCTCAGCAATTCTCCAAAATGCAG...AAGCTGGAGCCATCTCTGCACTAACTGCCCTCCCAAATATCTTGGTTCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AGCCACTGTCTTCCTCCTTCGGTAGCTGACAAGGGCCTGAAGGAATCAAAGTTCAGACAACGCTCTGCATaGTACCTTTTGCAAAACTCT +
Preference number: 5 (lower is better)
Translates to: SHCLPPSVADKGLKESKFRQRSA*YLLQNS
Trigger: AGAGTTTTGCAAAAGGTACAATGCAGAGCGTTGTCT...GAACTTTGATTCCTTCAGGCCCTTGTCAGCTACCGAAGGAGGAAGACAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AATTTTCTCAGTTCCTCATTTCAAGCACTCAACGGCCACAGGTGGCTGGTGGCTATGGTTATTGTGTTCTaGGTGTGTTCCAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: NFLSSSFQALNGHRWLVAMVIVF*VCSRTS
Trigger: GGAAGTCCTGGAACACACCAAGAACACAATAACCAT...AGCCACCAGCCACCTGTGGCCGTTGAGTGCTTGAAATGAGGAACTGAGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS TCA 90 bp GTGTCCTCTGAATCTCTGGCTGTGGCTTTGCCTTTTACAGATTTGTaGCTCTTCTCAACTTCACGGAGCACTTGGATTTTCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VSSESLAVALPFTDL*LFSTSRSTWIFFLS
Trigger: GCTGAGGAAGAAAATCCAAGTGCTCCGTGAAGTTGAGAAGAGTCACAAATCTGTAAAAGGCAAAGCCACAGCCAGAGATTCAGAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTCAGATGATGAGAAAGTaGGCCAGGACACGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAQMMRK*ARTRRN
Trigger: ATTTCTTCGTGTCCTGGCCAACTTTCTCATCATCTG...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAGGCAAGTGGATTGTTaGAGGCCAGGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQRQVDC*RPGVQG
Trigger: GCCTTGAACTCCTGGCCTCAAACAATCCACTTGCCT...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp TTAAACCAGCTCACTTCCTCTGGATTGAGAAATGTAGGCCCTTCTCCATCCCCCGTGATGGATGCATATTaGTTATCAGCTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LNQLTSSGLRNVGPSPSPVMDAY*LSAVSE
Trigger: TTCAGAGACAGCTGATAACAAATATGCATCCATCAC...GGGGGATGGAGAAGGGCCTACATTTCTCAATCCAGAGGAAGTGAGCTGGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGCAGATGATGAGAAAGTaGGCCAGGACACGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: KPSTFPLISNSAYEGWARQMMRK*ARTRRN
Trigger: ATTTCTTCGTGTCCTGGCCAACTTTCTCATCATCTG...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp CTAAGTGAACATAGAATCCCCAGAGACAACGCTCTGCATTGTACCTTTTGCAAAGGAGAGAACCTTGGTTaGGTATGTGTGAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: LSEHRIPRDNALHCTFCKGENLG*VCVKLG
Trigger: CCCCAGTTTCACACATACCAAACCAAGGTTCTCTCC...TTTGCAAAAGGTACAATGCAGAGCGTTGTCTCTGGGGATTCTATGTTCACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp AAACCCAGCACATTTCCACTAATATCAAACTCAGCATATGAAGGCTGGGCCAGGACGAAATCCTGTCATTaGCAGCAACATGGATGGAAC +
Preference number: 5 (lower is better)
Translates to: KPSTFPLISNSAYEGWARTKSCH*QQHGWN
Trigger: GTTCCATCCATGTTGCTGCAAATGACAGGATTTCGT...CCTGGCCCAGCCTTCATATGCTGAGTTTGATATTAGTGGAAATGTGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp TGTGTATTAGTAACCAGTGGAGGCCTGACAGTAATCACTAGGGGACCAATGGCTTTCCCAGGGGATACATaGAGTCTTGAAATTATCAAA +
Preference number: 5 (lower is better)
Translates to: CVLVTSGGLTVITRGPMAFPGDT*SLEIIK
Trigger: TTTGATAATTTCAAGACTCAATGTATCCCCTGGGAA...AGCCATTGGTCCCCTAGTGATTACTGTCAGGCCTCCACTGGTTACTAATACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS-3UTR CAA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGCTGCATTTTGGAGAATaGCTGAGATCGCTTAACCAC +
Preference number: 5 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQLHFGE*LRSLNH
Trigger: GTGGTTAAGCGATCTCAGCAATTCTCCAAAATGCAG...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS-3UTR CAA 90 bp GCAACATGGATGGAACAGGAAGTCATTATGTTAAGTGAAATAAGCCAGGCACAGCATCCAGATCATTCCTaGGTTGAAGATCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: ATWMEQEVIMLSEISQAQHPDHS*VEDQTQ
Trigger: CTGGGTTTGATCTTCAACCAAGGAATGATCTGGATG...CTGTGCCTGGCTTATTTCACTTAACATAATGACTTCCTGTTCCATCCATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS TCA 90 bp AAATGCCCAAGAATGCATCTGGCTATAAGTATCAAAGAAGATAGTTaGAATTCCTTTGTGCGGAATGTCCATGAAGTGGTGACCTACAAA +
Preference number: 5 (lower is better)
Translates to: KCPRMHLAISIKEDS*NSFVRNVHEVVTYK
Trigger: TTTGTAGGTCACCACTTCATGGACATTCCGCACAAAGGAATTTCAACTATCTTCTTTGATACTTATAGCCAGATGCATTCTTGGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2
CDS CAA 72 bp CGCCTGCCTGGGGTCCCCTCGGCTTTGAGAGCCCGCTaGCTTGAGGATCTCCTTCCCAGCCTGTCACCTGCC +
Preference number: 6 (lower is better)
Translates to: RLPGVPSALRAR*LEDLLPSLSPA
Trigger: GGCAGGTGACAGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCCCAGGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644205.1
CDS GCA 72 bp CAGGCCCTTTACCTGGTGGCTCATGGTCAGCAGCACTaGTGGGGTCCTGCACAGGCTCACGCAGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: QALYLVAHGQQH*WGPAQAHAACS
Trigger: GGAGCACGCTGCGTGAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 72 bp CGCCTGCCTGGGGTCCCCTCGGCTTTGAGAGCCCGCTaGCTTGAGGATCTCCTTCCCAGCCTGTCACCTGTG +
Preference number: 6 (lower is better)
Translates to: RLPGVPSALRAR*LEDLLPSLSPV
Trigger: CACAGGTGACAGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCCCAGGCAGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS TCA 72 bp GCCTGGGGTCCCCTCGGCTTTGAGAGCCCGCTTGCTTaGGGATCTCCTTCCCAGCCTGTCACCTGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: AWGPLGFESPLA*GSPSQPVTCVW
Trigger: CCACACACAGGTGACAGGCTGGGAAGGAGATCCTCAAGCAAGCGGGCTCTCAAAGCCGAGGGGACCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 72 bp CTGGCAGAATTGGAGGTCCCAGGGCCCTGCGCCTTCTaGTCCATGGCCTGGCTTTGGCTGGCAGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LAELEVPGPCAF*SMAWLWLAEGG
Trigger: TCCTCCCTCTGCCAGCCAAAGCCAGGCCATGGACAAGAAGGCGCAGGGCCCTGGGACCTCCAATTCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp CCGCCTCGTGCTTCCTCTTTCAGGCCCTTTACCTGGTaGCTCATGGTCAGCAGCACTGCTGGGGTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PPRASSFRPFTW*LMVSSTAGVLH
Trigger: GTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCACGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp ACTCCGCCTCGTGCTTCCTCTTTCAGGCCCTTTACCTaGTGGCTCATGGTCAGCAGCACTGCTGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: TPPRASSFRPFT*WLMVSSTAGVL
Trigger: CAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCACGAGGCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp CTTCTCCTCCCTCCTCGGAATCTCCTTTTCCCTCTTTaGGGCTGCTGTCCGCTCCTGGAAGGAGGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LLLPPRNLLFPL*GCCPLLEGGPL
Trigger: GAGAGGGCCTCCTTCCAGGAGCGGACAGCAGCCCCAAAGAGGGAAAAGGAGATTCCGAGGAGGGAGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS CCA 72 bp GTGCTTCCTCTTTCAGGCCCTTTACCTGGTGGCTCATaGTCAGCAGCACTGCTGGGGTCCTGCACAGGCTCA +
Preference number: 6 (lower is better)
Translates to: VLPLSGPLPGGS*SAALLGSCTGS
Trigger: TGAGCCTGTGCAGGACCCCAGCAGTGCTGCTGACCATGAGCCACCAGGTAAAGGGCCTGAAAGAGGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS GCA 72 bp GTGCAAAGATGCGTCCCAGCTGCCACTTCAGTCCAGTaGGTGGGTGGTAATTCTCCAGGGCAGCGATGGTTT +
Preference number: 6 (lower is better)
Translates to: VQRCVPAATSVQ*VGGNSPGQRWF
Trigger: AAACCATCGCTGCCCTGGAGAATTACCACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS TCA 72 bp CAAAACAAGCCCGTAGGAAGTCCCCCAGCAGGATGGTaGTGTACGTTACCAGCATGTCAGACACCGTCAGCC +
Preference number: 6 (lower is better)
Translates to: QNKPVGSPPAGW*CTLPACQTPSA
Trigger: GGCTGACGGTGTCTGACATGCTGGTAACGTACATCACCATCCTGCTGGGGGACTTCCTACGGGCTTGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000496948.2
CDS GCA 72 bp GAAATGTGTAGAGGTTCCCCAGGAAGAGTGCAAAGATaGGTCCCAGCTGCCACTTCAGTCCAGTGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: EMCRGSPGRVQR*VPAATSVQCVG
Trigger: ACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAACCTCTACACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS GCA 72 bp CAGACGTCCAAGATGATTCCGAGAGCTTGTGAGCTCTaGGGGGCTCAGAACAGGACACCCCAAAGTATGGCA +
Preference number: 6 (lower is better)
Translates to: QTSKMIPRACEL*GAQNRTPQSMA
Trigger: TGCCATACTTTGGGGTGTCCTGTTCTGAGCCCCGCAGAGCTCACAAGCTCTCGGAATCATCTTGGACGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644205.1
CDS CAA 90 bp AAGAGGGGAGAGAACCTTGGTTTGGTATGTGTGAAACTGGGGTACTaGAGGATCAGCCCTAGGGTCGAGGCTCCCTGGAGTCCTAGCCAT +
Preference number: 6 (lower is better)
Translates to: KRGENLGLVCVKLGY*RISPRVEAPWSPSH
Trigger: ATGGCTAGGACTCCAGGGAGCCTCGACCCTAGGGCTGATCCTCAAGTACCCCAGTTTCACACATACCAAACCAAGGTTCTCTCCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS TCA 72 bp GAGAAATCAGACGTCCAAGATGATTCCGAGAGCTTGTaGGCTCTGCGGGGCTCAGAACAGGACACCCCAAAG +
Preference number: 6 (lower is better)
Translates to: EKSDVQDDSESL*ALRGSEQDTPK
Trigger: CTTTGGGGTGTCCTGTTCTGAGCCCCGCAGAGCTCACAAGCTCTCGGAATCATCTTGGACGTCTGATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644205.1
CDS GCA 72 bp GGCCAAGAGAAATGTGTAGAGGTTCCCCAGGAAGAGTaGAAAGATGCGTCCCAGCTGCCACTTCAGTCCAGT +
Preference number: 6 (lower is better)
Translates to: GQEKCVEVPQEE*KDASQLPLQSS
Trigger: ACTGGACTGAAGTGGCAGCTGGGACGCATCTTTGCACTCTTCCTGGGGAACCTCTACACATTTCTCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS CCA 72 bp AAAGATGCGTCCCAGCTGCCACTTCAGTCCAGTGCGTaGGTGGTAATTCTCCAGGGCAGCGATGGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: KDASQLPLQSSA*VVILQGSDGFK
Trigger: TTTGAAACCATCGCTGCCCTGGAGAATTACCACCCACGCACTGGACTGAAGTGGCAGCTGGGACGCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS CCA 72 bp GAGGGAGGAGTGGTCTCTTCCTTGGTGAGTTGGAGCTaGGTGGCATTTTTGGAGCTGCTTTTAGGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: EGGVVSSLVSWS*VAFLELLLGVS
Trigger: GGACACACCTAAAAGCAGCTCCAAAAATGCCACCCAGCTCCAACTCACCAAGGAAGAGACCACTCCTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp CTGGCAGAGGGAGGAGTGGTCTCTTCCTTGGTGAGTTaGAGCTGGGTGGCATTTTTGGAGCTGCTTTTAGGT +
Preference number: 6 (lower is better)
Translates to: LAEGGVVSSLVS*SWVAFLELLLG
Trigger: ACCTAAAAGCAGCTCCAAAAATGCCACCCAGCTCCAACTCACCAAGGAAGAGACCACTCCTCCCTCTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 90 bp GGAGGAGTGGTCTCTTCCTTGGTGAGTTGGAGCTGGGTGGCATTTTaGGAGCTGCTTTTAGGTGTGTCCTCTGAATCTCTGGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GGVVSSLVSWSWVAF*ELLLGVSSESLAVA
Trigger: AGCCACAGCCAGAGATTCAGAGGACACACCTAAAAGCAGCTCCAAAAATGCCACCCAGCTCCAACTCACCAAGGAAGAGACCACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp CAAGAACATCAGCAGGATGGCTGGGATGATCAGGCCTaGATTGGCGAGGAAAGCAAAGATCTTGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: QEHQQDGWDDQA*IGEESKDLAQE
Trigger: TTCCTGGGCAAGATCTTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGCTGATGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 90 bp ATGGCTGGGATGATCAGGCCTGGATTGGCGAGGAAAGCAAAGATCTaGCCCAGGAAGGTTGGGAAATCGTTTTCAATGGTCTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: MAGMIRPGLARKAKI*PRKVGKSFSMVSWR
Trigger: CCTCCAAGAGACCATTGAAAACGATTTCCCAACCTTCCTGGGCAAGATCTTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CCA 72 bp CAGGTAGTAAATGGCCAAGAACATCAGCAGGATGGCTaGGATGATCAGGCCTGGATTGGCGAGGAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: QVVNGQEHQQDG*DDQAWIGEESK
Trigger: TTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGCTGATGTTCTTGGCCATTTACTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 72 bp TCCCAGCTGGTGAACATCTTGAAGCTGAATGTGAAGTaGTCACTCTCCCCTTCGCCTGTGCTTCCTTGGGTA +
Preference number: 6 (lower is better)
Translates to: SQLVNILKLNVK*SLSPSPVLPWV
Trigger: TACCCAAGGAAGCACAGGCGAAGGGGAGAGTGACAACTTCACATTCAGCTTCAAGATGTTCACCAGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS TCA 72 bp AGTAAATGGCCAAGAACATCAGCAGGATGGCTGGGATaGTCAGGCCTGGATTGGCGAGGAAAGCAAAGATCT +
Preference number: 6 (lower is better)
Translates to: SKWPRTSAGWLG*SGLDWRGKQRS
Trigger: AGATCTTTGCTTTCCTCGCCAATCCAGGCCTGATCATCCCAGCCATCCTGCTGATGTTCTTGGCCATTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS CAA 72 bp TGTGAAGTTGTCACTCTCCCCTTCGCCTGTGCTTCCTaGGGTATTGCTGGCCATCGATCGAATGACAATAAT +
Preference number: 6 (lower is better)
Translates to: CEVVTLPFACAS*GIAGHRSNDNN
Trigger: ATTATTGTCATTCGATCGATGGCCAGCAATACCCAAGGAAGCACAGGCGAAGGGGAGAGTGACAACTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS TCA 72 bp GAATCTCTGGCTGTGGCTTTGCCTTTTACAGATTTGTaGCTCTTCTCAACTTCACGGAGCACTTGGATTTTC +
Preference number: 6 (lower is better)
Translates to: ESLAVALPFTDL*LFSTSRSTWIF
Trigger: GAAAATCCAAGTGCTCCGTGAAGTTGAGAAGAGTCACAAATCTGTAAAAGGCAAAGCCACAGCCAGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358864.2
CDS GCA 72 bp GATGGTCCTCTGGTTGTTGTAGTAGCCATAGAAGAGTaGAGAGTACTTGATATAGCCCTCAAAATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: DGPLVVVVAIEE*RVLDIALKIPK
Trigger: CTTTGGGATTTTGAGGGCTATATCAAGTACTCTGCACTCTTCTATGGCTACTACAACAACCAGAGGACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358864.2
ENST00000644205.1
CDS TCA 72 bp ACATCACGATCTCTACCTCATTCCTTTCATACCAGCTaGCATTCTGCATTTTGGAGAATTGCTGAGATCGCT +
Preference number: 6 (lower is better)
Translates to: TSRSLPHSFHTS*HSAFWRIAEIA
Trigger: AGCGATCTCAGCAATTCTCCAAAATGCAGAATGTCAGCTGGTATGAAAGGAATGAGGTAGAGATCGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS CAA 90 bp TACCTCATTCCTTTCATACCAGCTGACATTCTGCATTTTGGAGAATaGCTGAGATCGCTTAACCACAAAGTAAATGAGGTACCCACTTCC +
Preference number: 6 (lower is better)
Translates to: YLIPFIPADILHFGE*LRSLNHKVNEVPTS
Trigger: GGAAGTGGGTACCTCATTTACTTTGTGGTTAAGCGATCTCAGCAATTCTCCAAAATGCAGAATGTCAGCTGGTATGAAAGGAATGAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS CAA 72 bp CCTTTCATACCAGCTGACATTCTGCATTTTGGAGAATaGCTGAGATCGCTTAACCACAAAGTAAATGAGGTA +
Preference number: 6 (lower is better)
Translates to: PFIPADILHFGE*LRSLNHKVNEV
Trigger: TACCTCATTTACTTTGTGGTTAAGCGATCTCAGCAATTCTCCAAAATGCAGAATGTCAGCTGGTATGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358864.2
ENST00000496948.2
ENST00000644205.1
CDS TCA 72 bp AGAATGCATCTGGCTATAAGTATCAAAGAAGATAGTTaGAATTCCTTTGTGCGGAATGTCCATGAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: RMHLAISIKEDS*NSFVRNVHEVV
Trigger: CACCACTTCATGGACATTCCGCACAAAGGAATTTCAACTATCTTCTTTGATACTTATAGCCAGATGCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496948.2