RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165091

Ensembl transcript IDs: ENST00000297784.10, ENST00000340019.4, ENST00000469455.1, ENST00000486417.5, ENST00000492418.1, ENST00000497073.1, ENST00000643676.1, ENST00000644967.1, ENST00000645053.1, ENST00000645208.2, ENST00000645773.1, ENST00000645787.1, ENST00000646244.1, ENST00000646619.1, ENST00000650689.1, ENST00000651183.1, ENST00000651743.1

Found 814 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTTGTCTTTGTGTaGCAGAAGCAAGACGGTTTTAGCATTTGCAGAGGGGTCCGGTGT +
Preference number: 1 (lower is better)
Translates to: SSHGRTMEPWRVVFV*QKQDGFSICRGVRC
Trigger: ACACCGGACCCCTCTGCAAATGCTAAAACCGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR CCA 90 bp CCTAGTCAGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATaGAGCCCTGGAGAGTTGTCTTTGTGTGACAGAAGCAAGACGGTT +
Preference number: 1 (lower is better)
Translates to: PSQAQEFNSHPMAGR*SPGELSLCDRSKTV
Trigger: AACCGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCTGACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR TCA 90 bp GGCCAAAACCATCACCAAAATGACAGCAATGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTG +
Preference number: 1 (lower is better)
Translates to: GQNHHQNDSNDQPRV*KLSQDLRHPAWEIV
Trigger: CACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCATTGCTGTCATTTTGGTGATGGTTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR TCA 90 bp GCCTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATG +
Preference number: 1 (lower is better)
Translates to: ASFSPSAINLLLPLS*ILPSKEARIVSSLM
Trigger: CATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CCA 90 bp CCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCACTTaGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTT +
Preference number: 1 (lower is better)
Translates to: PCQCIETQVKAEQGT*NSQFAHLALFQVYF
Trigger: AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR GCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAGACAGGATA +
Preference number: 1 (lower is better)
Translates to: IKFRTGRETVRLFYG*LLVIKKNEKLRDRI
Trigger: TATCCTGTCTCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp AGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCACTGGACGGTTTTAGCATTTaGAGAGGGGTCCGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: SFEDPGLRNIAAHNGPALDGFSI*RGVRCL
Trigger: CAGACACCGGACCCCTCTGCAAATGCTAAAACCGTC...CAGTGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 2 (lower is better)
Translates to: TFLQERWMVRENVTSEQANPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CAA 90 bp AACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTTGTCTTaGTGTGACAGAAGCAAGACGGTTTTAGCATTTGCAGAGGGGTCC +
Preference number: 2 (lower is better)
Translates to: NSHPMAGRWSPGELS*CDRSKTVLAFAEGS
Trigger: GGACCCCTCTGCAAATGCTAAAACCGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCCTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGLLPLS*ILPSKE
Trigger: CTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAG...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCATGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAAWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTTGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR GCA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAAGACGGTTTTAGCATTTaGAGAGGGGTCCGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKDGFSI*RGVRCL
Trigger: CAGACACCGGACCCCTCTGCAAATGCTAAAACCGTC...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTATTTGTGGGGCGCGTaGTTGGGGAGACAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSYLWGA*LGRQVE
Trigger: TTCTACCTGTCTCCCCAACCACGCGCCCCACAAATA...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR-3UTR CCA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACTTAACAGTCATCCCATaGCAGGACGATGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNLTVIP*QDDGAL
Trigger: CAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAA...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp GGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGTGCAGCTAGAGTTGTCTTTGTGTaGCAGAAGCAAGACGGTTTT +
Preference number: 2 (lower is better)
Translates to: GSQDTYYWRPAAAAARAARVVFV*QKQDGF
Trigger: AAAACCGTCTTGCTTCTGTCACACAAAGACAACTCT...AGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACTTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR GCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR GCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCACAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 2 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAAQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR GCA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000645053.1
3UTR-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR GCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: TFLQERWMVRENVTSEQARSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGTTAACAGTCATCCCATaGCAGGACGATGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: QGKVYLFWALRILITGDQLTVIP*QDDGAL
Trigger: CAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAA...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CCA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CCA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR GCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR GCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CAA 90 bp GAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTaGTCTTTGTGTGACAGAAGCAAGACGGTTTTAGCATTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: EFNSHPMAGRWSPGE*SLCDRSKTVLAFAE
Trigger: CTCTGCAAATGCTAAAACCGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTCATTGGAAGACAAATaGGCAGACTGTGAGAGAACA +
Preference number: 2 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLASLEDK*ADCERT
Trigger: TGTTCTCTCACAGTCTGCTCATTTGTCTTCCAATGA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 2 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHNPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp CTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAAAGAGTTGTCTTTGTGTaGCAGAAGCAAGACGGTTTT +
Preference number: 2 (lower is better)
Translates to: LRHPAWEIVLQGLSNDFKRVVFV*QKQDGF
Trigger: AAAACCGTCTTGCTTCTGTCACACAAAGACAACTCT...TTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp CGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATAGAAGGAGCCCATCCTaGCAAAGGAGGAAACAATAT +
Preference number: 2 (lower is better)
Translates to: RCLLALGSSIEIIDGQNHRRSPS*QRRKQY
Trigger: ATATTGTTTCCTCCTTTGTCAGGATGGGCTCCTTCT...ATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644967.1
3UTR-3UTR GCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGRSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCTTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSLELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCAGTTTAACTAGTATATaGCCTTCCTCCAGGAACGCT +
Preference number: 2 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGSLTSI*PSSRNA
Trigger: AGCGTTCCTGGAGGAAGGTCATATACTAGTTAAACT...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp GTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 2 (lower is better)
Translates to: VYLFWALRILITGDQQLQPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...CTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR GCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 2 (lower is better)
Translates to: TFLQERWMVRENVTSEQASLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp CTTCTTTTTGAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 2 (lower is better)
Translates to: LLFEIQIRCLLALGSSIETVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...CTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR CCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACTTCCTCCAGGAACGCTaGATGGTAAGGGAAAACGTC +
Preference number: 2 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHFLQER*MVRENV
Trigger: GACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAA...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 2 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 2 (lower is better)
Translates to: GKVYLFWALRILITGDQQPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR TCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCTTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR-3UTR GCA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR GCA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR GCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 2 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000645053.1
3UTR-3UTR GCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLRSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACTTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHLGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 2 (lower is better)
Translates to: QGKVYLFWALRILITGDQTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACACTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: TRHTKELEDTTPAHREFTLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR-3UTR GCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 2 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 2 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCTTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGLGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: WQGNSAIILWLPFGDQKELGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSRSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: WQGNSAIILWLPFGDQKELELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR-3UTR TCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATCATTGGAAGACAAATaGGCAGACTGTGAGAGAACA +
Preference number: 2 (lower is better)
Translates to: WQGNSAIILWLPFGDQKESLEDK*ADCERT
Trigger: TGTTCTCTCACAGTCTGCTCATTTGTCTTCCAATGA...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAAACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 2 (lower is better)
Translates to: WQGNSAIILWLPFGDQKETVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 2 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR TCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCCAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 2 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp CCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTCTATTTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: PAWEIVLQGLSNDFKHSIWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...AATAGAATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR GCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: KASEGTECYYLKSIQTVNSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAAGTTTAACTAGTATATaGCCTTCCTCCAGGAACGCT +
Preference number: 2 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRSLTSI*PSSRNA
Trigger: AGCGTTCCTGGAGGAAGGTCATATACTAGTTAAACT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR CAA 90 bp TTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTaGGTGATCAAAAAGAATGAGAAACTCAGAGACAGGATAATAGAA +
Preference number: 2 (lower is better)
Translates to: FRTGRETVRLFYGCL*VIKKNEKLRDRIIE
Trigger: TTCTATTATCCTGTCTCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGAGAAGATACAACCCCTaGTCACAGAGAATTTACAAT +
Preference number: 2 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLRRYNP*SQRIYN
Trigger: ATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCT...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CAA 90 bp TACAGACATAAGAGCCCAAGGAATCCTAAAAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTGAAAAAGACAACCAGAGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: YRHKSPRNPKKGVIR*RMEVNLKKTTRGIK
Trigger: CTTTATTCCTCTGGTTGTCTTTTTCAGATTGACTTCCATTCTCAATCTTATCACTCCCTTTTTAGGATTCCTTGGGCTCTTATGTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR TCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 2 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR GCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGATGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR GCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 2 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 2 (lower is better)
Translates to: LELSICPLGSLPSIFYFLKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR-3UTR CAA 90 bp GGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGTGCAGCTCCTGGAGAGTTGTCTTaGTGTGACAGAAGCAAGACG +
Preference number: 3 (lower is better)
Translates to: GSQDTYYWRPAAAAARAAPGELS*CDRSKT
Trigger: CGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGG...AGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCACTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 3 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSLASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR CAA 90 bp AAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: KLSQDLRHPAWEIVLQGLFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...GAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR CCA 72 bp GCACAGGAATTTAACAGTCATCCCATGGCAGGACGATaGAGCCCTGGAGAGTTGTCTTTGTGTGACAGAAGC +
Preference number: 3 (lower is better)
Translates to: AQEFNSHPMAGR*SPGELSLCDRS
Trigger: GCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp GCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCCCTGGAGAGTTGTCTTaGTGTGACAGAAGCAAGACG +
Preference number: 3 (lower is better)
Translates to: AKCTFSGLSGYLLLATSSPGELS*CDRSKT
Trigger: CGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGG...GCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR TCA 72 bp TCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAGGCAAGAATTGTATCG +
Preference number: 3 (lower is better)
Translates to: SPSAINLLLPLS*ILPSKEARIVS
Trigger: CGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR TCA 72 bp CATCACCAAAATGACAGCAATGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: HHQNDSNDQPRV*KLSQDLRHPAW
Trigger: CCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCATTGCTGTCATTTTGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR CAA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 3 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 3 (lower is better)
Translates to: CCSGRTDDALIGQHDLENAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CAA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHMSGDH*VMVRWW
Trigger: CCACCACCTGACCATCACCAAATGGTCACCTGACAT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp GGAAGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCAAATATCTTTTCCATATaGATTCACCTAGTCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GSFEDPGLRNIAAHNGPANIFSI*IHLVRH
Trigger: GTGCCTGACTAGGTGAATCAATATGGAAAAGATATT...TGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAAGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 3 (lower is better)
Translates to: TDDALIGQHDLENPSRVEAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CAA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 3 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CAA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: NGKQIGLVLERHTELSYAMSGDH*VMVRWW
Trigger: CCACCACCTGACCATCACCAAATGGTCACCTGACAT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: TFKQQGKVYLFWALRILIWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTTTGTGGGGCGCGTGGTaGGGGAGACAGGTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: LELSICPLGSLPSIFYFLLWGAW*GRQVEK
Trigger: TTTTTCTACCTGTCTCCCCAACCACGCGCCCCACAA...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp CGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATAATATCTTTTCCATATaGATTCACCTAGTCAGGCAC +
Preference number: 3 (lower is better)
Translates to: RCLLALGSSIEIIDGQNHNIFSI*IHLVRH
Trigger: GTGCCTGACTAGGTGAATCAATATGGAAAAGATATT...ATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR-3UTR CAA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 3 (lower is better)
Translates to: QGKVYLFWALRILITGDQIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCTGGAGCCCTGGAGAGTaGTCTTTGTGTGACAGAAGC +
Preference number: 3 (lower is better)
Translates to: NIFSILIHLVRHRNLTVIWSPGE*SLCDRS
Trigger: GCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCA...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
3UTR GCA 72 bp AGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAGAATGAGAAACTCAGA +
Preference number: 3 (lower is better)
Translates to: RTGRETVRLFYG*LLVIKKNEKLR
Trigger: TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR GCA 72 bp TTGCATTTTCATCTTCTTTTTGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGTAGCATTGAGATAATA +
Preference number: 3 (lower is better)
Translates to: LHFHLLFEIQIR*LLALGSSIEII
Trigger: TATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAATGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
3UTR CCA 72 bp GAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATTACTTTTAAACAGCAA +
Preference number: 3 (lower is better)
Translates to: EQENSSSTVLVL*AFTYCITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
3UTR-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCAAATTGGCTTAGTTTaGGAAAGGCACACTGAGTTA +
Preference number: 3 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDQIGLV*ERHTEL
Trigger: TAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTG +
Preference number: 3 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDKGVIR*RMEVNL
Trigger: CAGATTGACTTCCATTCTCAATCTTATCACTCCCTT...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CCA 72 bp ACAGGAATGTCAGGTGACCATTTGGTGATGGTCAGGTaGTGGTTAAACTATCTCTCTAAAATAATAATTAGT +
Preference number: 3 (lower is better)
Translates to: TGMSGDHLVMVR*WLNYLSKIIIS
Trigger: ACTAATTATTATTTTAGAGAGATAGTTTAACCACCACCTGACCATCACCAAATGGTCACCTGACATTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCTGGGAGGCGGAGGTTaGAGAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLLGGGG*REPRSH
Trigger: GTGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCACTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAALATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCTGGGAGGCGGAGGTTaGAGAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: QGLKAVSRSSPSSLGNRALGGGG*REPRSH
Trigger: GTGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAG...AGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR GCA 90 bp GGAAGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCAGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSFEDPGLRNIAAHNGPAEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...TGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR GCA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATCTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDLATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGACTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGLATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLRGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLALLPLS*ILPSKE
Trigger: CTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAG...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGACTGGGAGGCGGAGGTTaGAGAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGLGGGG*REPRSH
Trigger: GTGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAG...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: RHRNLTVIPWQDDGALESRFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...ACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTCCCGCCTCAGCCTCTaGGTAGATGGGAAACAGTCG +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKSRLSL*VDGKQS
Trigger: CGACTGTTTCCCATCTACTCAGAGGCTGAGGCGGGA...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR TCA 90 bp AAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCCTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: KLSQDLRHPAWEIVLQGLLFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...GAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGTGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSNPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR TCA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACAGCCCATCCCAGGCATaGTCCCATCATCTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNSPSQA*SHHLSV
Trigger: TACTGACAGATGATGGGATCATGCCTGGGATGGGCT...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486417.5
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCTGGGAGGCGGAGGTTaGAGAGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENLGGGG*REPRSH
Trigger: GTGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAG...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCACAGGCTCAAAGTTaGTGCCCCCAGCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAPQAQS*CPQQRF
Trigger: AAATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGG...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp AGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCACTGAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: SFEDPGLRNIAAHNGPALSCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...CAGTGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR GCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCTGGCAGGGAAACAGTaGGATTATTCTATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLLAGKQ*DYSMAA
Trigger: GGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAGCCCAAAACACAGCATaGTGGCTGCGTGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRAQNTA*WLREDP
Trigger: TGGGTCTTCACGCAGCCAGCATGCTGTGTTTTGGGC...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645208.2
CDS-3UTR CCA 90 bp AGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: RHRNLTVIPWQDDGALESGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...ACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR CCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCCCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp CTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAATTAACAGTCATCCCATaGCAGGACGATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRHPAWEIVLQGLSNDFKLTVIP*QDDGAL
Trigger: CAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAA...TTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCACGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAARGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp GTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VYLFWALRILITGDQQLQRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...CTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp CTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAATTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRHPAWEIVLQGLSNDFKLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...TTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTTTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: QGKVYLFWALRILITGDQLLPLS*ILPSKE
Trigger: CTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAG...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR GCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCACACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAAHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCACAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAAQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp TTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FSGLSGYLLLATSSCSCSRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...CGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RCLLALGSSIEIIDGQNHQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...ATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCACTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYALATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQLATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTGACGGTTTTAGCATTTaGAGAGGGGTCCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIDGFSI*RGVRCL
Trigger: CAGACACCGGACCCCTCTGCAAATGCTAAAACCGTC...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQATPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLACCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RHRNLTVIPWQDDGALESKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...ACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp GGAAGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCAAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSFEDPGLRNIAAHNGPASTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...TGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCCTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLRFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAARFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTATTTGTGGGGCGCGTaGTTGGGGAGACAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAYLWGA*LGRQVE
Trigger: TTCTACCTGTCTCCCCAACCACGCGCCCCACAAATA...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCATTCCTCCAGGAACGCTaGATGGTAAGGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSFLQER*MVRENV
Trigger: GACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAA...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645053.1
3UTR CAA 72 bp CCCACCACCCATCCCACAGGAATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGGTTAAACTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: PTTHPTGMSGDH*VMVRWWLNYLS
Trigger: AGAGAGATAGTTTAACCACCACCTGACCATCACCAAATGGTCACCTGACATTCCTGTGGGATGGGTGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTTCTTTTTGAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGCTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LLFEIQIRCLLALGSSIELFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...CTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCGGACACACGCAGCTTTaGAGTTCTCAAAATCACGGA +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSGHTQL*SSQNHG
Trigger: TCCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCC...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWASQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GKVYLFWALRILITGDQQSQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHRGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKNPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCAGAAGGAGCCCATCCTaGCAAAGGAGGAAACAATAT +
Preference number: 4 (lower is better)
Translates to: KLSQDLRHPAWEIVLQGLRRSPS*QRRKQY
Trigger: ATATTGTTTCCTCCTTTGTCAGGATGGGCTCCTTCT...GAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR GCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCCCACAGGCTCAAAGTTaGTGCCCCCAGCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFPQAQS*CPQQRF
Trigger: AAATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGG...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAGAGGGACTTCCCTTCTaGAGCTCCTTAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGREGLPF*SSLSIH
Trigger: GTGAATGCTTAAGGAGCTGCAGAAGGGAAGTCCCTC...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR GCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGCAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAAAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRHPAWEIVLQGLSNDFKRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...TTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACTGGCGACCAGCAGCTaGAGCTGCTCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRLATSS*SCSCSC
Trigger: GCAGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGACTGGCAGGGAAACAGTaGGATTATTCTATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRLAGKQ*DYSMAA
Trigger: GGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAG...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCCTGGCAGGGAAACAGTaGGATTATTCTATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGLAGKQ*DYSMAA
Trigger: GGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAG...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAPDHST*TVPSPQ
Trigger: CTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCGTCAGAAGGTCTCAGTaGCTGGCTAGTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFVRRSQ*LASLER
Trigger: CCTCTCCAAACTAGCCAGCCACTGAGACCTTCTGAC...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGTGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGCFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGATGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRCCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: KLSQDLRHPAWEIVLQGLSTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...GAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCTTAACAGTCATCCCATaGCAGGACGATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFLTVIP*QDDGAL
Trigger: CAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAA...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486417.5
CDS-3UTR TCA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQNPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGCACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGCAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: KCTFSGLSGYLLLATSSCVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...GCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLARSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCAGCCTCTGAGTAGATaGGAAACAGTCGCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENQPLSR*ETVARH
Trigger: ATGGCGCGCGACTGTTTCCCATCTACTCAGAGGCTG...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR CCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEPDHST*TVPSPQ
Trigger: CTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGG...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCCCAGACCACTCCACGTaGACAGTTCCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGPDHST*TVPSPQ
Trigger: CTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGG...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLACFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLTPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLIQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 4 (lower is better)
Translates to: ESCLKIFAIQLGKSCSRVTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...GACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGTATTTGTGGGGCGCGTaGTTGGGGAGACAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQYLWGA*LGRQVE
Trigger: TTCTACCTGTCTCCCCAACCACGCGCCCCACAAATA...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGCTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQLFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAAGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp TTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LIHLVRHRNLTVIPWQDDSQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...ATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR TCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLSQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp TTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: FSGLSGYLLLATSSCSCSPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...CGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAACTTCTGCCCCTCAGCTaGATTCTTCCCTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: WQGNSAIILWLPFGDQKELLPLS*ILPSKE
Trigger: CTCCTTGGAGGGAAGAATTCAGCTGAGGGGCAGAAG...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAACCCAGGTCAAAGCTaGACAGGGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIANPGQS*TGHLEL
Trigger: GAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTTTTTCCTCCACTTTaGTTTGTACTTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VYLFWALRILITGDQQLQLFPPL*FVLPFC
Trigger: GCAGAAGGGAAGTACAAATCAAAGTGGAGGAAAAAG...CTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGACAGGCTCAAAGTTGCTaGCCCCAGCAGAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGQAQSC*PQQRFS
Trigger: TGAAAATCTCTGCTGGGGGCAGCAACTTTGAGCCTG...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACCACAGGCTCAAAGTTaGTGCCCCCAGCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAPQAQS*CPQQRF
Trigger: AAATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: QGKVYLFWALRILITGDQSCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: QGKVYLFWALRILITGDQIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000645053.1
CDS-3UTR GCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGTTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKVYLFWALRILITGDQQLELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR GCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATGACGGTTTTAGCATTTaGAGAGGGGTCCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNDGFSI*RGVRCL
Trigger: CAGACACCGGACCCCTCTGCAAATGCTAAAACCGTC...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKPDHST*TVPSPQ
Trigger: CTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGG...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTAGTGGCTGGCTAGTTTaGAGAGGGACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCISGWLV*RGTSLL
Trigger: CAGAAGGGAAGTCCCTCTCCAAACTAGCCAGCCACT...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGACTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCTGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGCFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGTGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GKVYLFWALRILITGDQQCFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFTPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFIQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGSTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIARFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKLGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCGAATGGCAAGCAAATTaGCTTAGTTTTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLEWQAN*LSFGKA
Trigger: TGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATTC...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGGTCAACTGCAGGGAATaGCAAGCAAATTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAVNCRE*QANWLS
Trigger: ACTAAGCCAATTTGCTTGCCATTCCCTGCAGTTGAC...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACGATCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHDQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGATC...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGTGGAGCGCAATGGCGTaGTTTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQWSAMA*FQLTAT
Trigger: GGTTGCAGTGAGCTGAAATCACGCCATTGCGCTCCA...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR TCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTCCTGGAGGGCTTGTaGAAGAAAGCACAGATTGCT +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDLLEGL*KKAQIA
Trigger: AGCAATCTGTGCTTTCTTTCACAAGCCCTCCAGGAG...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR TCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: GKVYLFWALRILITGDQQIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGAGGAGAGCGGCAACCTaGAATTCATCCATCCAATTG +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLRRAAT*NSSIQL
Trigger: CAATTGGATGGATGAATTTCAGGTTGCCGCTCTCCT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCTTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYSQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFSQPKR*GIHSLQ
Trigger: TTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGA...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAACGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVERGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATATGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAACCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAACAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR TCA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGTCATTGGAAGACAAATaGGCAGACTGTGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: GKVYLFWALRILITGDQQSLEDK*ADCERT
Trigger: TGTTCTCTCACAGTCTGCTCATTTGTCTTCCAATGA...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR TCA 90 bp GTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGGAATGGAAGTCAATCTaGAAAAGACAACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VYLFWALRILITGDQQLQEWKSI*KRQPEE
Trigger: TTCCTCTGGTTGTCTTTTTCAGATTGACTTCCATTC...CTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAGAGGGACTTCCCTTCTaGAGCTCCTTAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAEGLPF*SSLSIH
Trigger: GTGAATGCTTAAGGAGCTGCAGAAGGGAAGTCCCTC...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR GCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTGAGGGACTTCCCTTCTaGAGCTCCTTAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIEGLPF*SSLSIH
Trigger: GTGAATGCTTAAGGAGCTGCAGAAGGGAAGTCCCTC...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR GCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAAAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLEIQIR*LLALGS
Trigger: ACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTTTGTACTTCCCTTCTaGAGCTCCTTAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: AKCTFSGLSGYLLLATSSFVLPF*SSLSIH
Trigger: GTGAATGCTTAAGGAGCTGCAGAAGGGAAGTACAAA...GCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGCAGGCTGGAGCGCAATaGCGTGATTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLQAGAQ*RDFSSL
Trigger: CAGTGAGCTGAAATCACGCCATTGCGCTCCAGCCTG...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR CCA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAAACAGTGATCTTTCATaGCCTGAAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRNSDLS*PEIPAT
Trigger: AGTAGCTGGGATTTCAGGCCATGAAAGATCACTGTT...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAAAGTGGCTGGCTAGTTTaGAGAGGGACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVESGWLV*RGTSLL
Trigger: CAGAAGGGAAGTCCCTCTCCAAACTAGCCAGCCACT...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCGAAGGTCTCAGTGGCTaGCTAGTTTGGAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSEGLSG*LVWRGT
Trigger: AGTCCCTCTCCAAACTAGCCAGCCACTGAGACCTTC...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATTTTGGGTGACATCCTaGGGGTGTCCTGTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEFWVTS*GCPVRR
Trigger: CCTTCTGACAGGACACCCCCAGGATGTCACCCAAAA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACGATTTTATTTTCCCATaGGACACACGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNDFIFP*DTRSFE
Trigger: TTCAAAGCTGCGTGTGTCCCATGGGAAAATAAAATC...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp CCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTCTATTACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: PAWEIVLQGLSNDFKHSITPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...AATAGAATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIACCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGCTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATACTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHILRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITRFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGRFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: TFLQERWMVRENVTSEQAKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNITVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCTATTTGTGGGGCGCGTaGTTGGGGAGACAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSYLWGA*LGRQVE
Trigger: TTCTACCTGTCTCCCCAACCACGCGCCCCACAAATA...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATGGAGATCTTAGGAGTTaGGCAAGTGGGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYGDLRS*ASGLKH
Trigger: ATGCTTGAGCCCACTTGCCCAACTCCTAAGATCTCC...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTCTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITLFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHTEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAGGAGAGCGGCAACCTaGAATTCATCCATCCAATTG +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIARRAAT*NSSIQL
Trigger: CAATTGGATGGATGAATTTCAGGTTGCCGCTCTCCT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATAGGAGAGCGGCAACCTaGAATTCATCCATCCAATTG +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNRRAAT*NSSIQL
Trigger: CAATTGGATGGATGAATTTCAGGTTGCCGCTCTCCT...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTCGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLRGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCTTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KCTFSGLSGYLLLATSSCFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...GCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCATGGCTGCCTTTTGGTaGTCAAAAAGAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSMAAFW*SKRMRN
Trigger: GTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCAT...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCGAATGGAAGTCAATCTaGAAAAGACAACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSEWKSI*KRQPEE
Trigger: TTCCTCTGGTTGTCTTTTTCAGATTGACTTCCATTC...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATAGAGTTGTCTTTGTGTaGCAGAAGCAAGACGGTTTT +
Preference number: 4 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDRVVFV*QKQDGF
Trigger: AAAACCGTCTTGCTTCTGTCACACAAAGACAACTCT...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR GCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGCCACAGGCTCAAAGTTaGTGCCCCCAGCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLPQAQS*CPQQRF
Trigger: AAATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGG...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QGKVYLFWALRILITGDQITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTCACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: AKCTFSGLSGYLLLATSSKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...GCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAAAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCACAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYAQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIASCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNSCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYSCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACATAGCAGTTCCACAGTaGTTGTTCTCTGGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDIAVPQ*LFSGRS
Trigger: TGAACGCCCAGAGAACAAGCACTGTGGAACTGCTAT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLASLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQRSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGTTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQLELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTAGAAGATACAACCCCTaGTCACAGAGAATTTACAAT +
Preference number: 4 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLARRYNP*SQRIYN
Trigger: ATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCT...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCTGGCGACCAGCAGCTaGAGCATTTTCATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENLATSS*SIFIFF
Trigger: AAAGAAGATGAAAATGCTGCAGCTGCTGGTCGCCAG...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651183.1
CDS-3UTR CCA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTGAAGGTCTCAGTGGCTaGCTAGTTTGGAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIEGLSG*LVWRGT
Trigger: AGTCCCTCTCCAAACTAGCCAGCCACTGAGACCTTC...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTGAAGGTCTCAGTGGCTaGCTAGTTTGGAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLEGLSG*LVWRGT
Trigger: AGTCCCTCTCCAAACTAGCCAGCCACTGAGACCTTC...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTCAGAAGGTCTCAGTaGCTGGCTAGTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLVRRSQ*LASLER
Trigger: CCTCTCCAAACTAGCCAGCCACTGAGACCTTCTGAC...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCATTTTGGGTGACATCCTaGGGGTGTCCTGTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYAFWVTS*GCPVRR
Trigger: CCTTCTGACAGGACACCCCCAGGATGTCACCCAAAA...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCGATTTTATTTTCCCATaGGACACACGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGDFIFP*DTRSFE
Trigger: TTCAAAGCTGCGTGTGTCCCATGGGAAAATAAAATC...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITCCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAGATTCGCTGCCTTCTaGCCCTTGGCAGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLRFAAF*PLAVAL
Trigger: CAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAAAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: LRHPAWEIVLQGLSNDFKKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...TTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTATTTGTGGGGCGCGTaGTTGGGGAGACAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLYLWGA*LGRQVE
Trigger: TTCTACCTGTCTCCCCAACCACGCGCCCCACAAATA...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIALGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATTCCTCCAGGAACGCTaGATGGTAAGGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: WQGNSAIILWLPFGDQKEFLQER*MVRENV
Trigger: GACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAA...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCTTCCTCCAGGAACGCTaGATGGTAAGGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGFLQER*MVRENV
Trigger: GACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAA...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTGGAGATCTTAGGAGTTaGGCAAGTGGGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITGDLRS*ASGLKH
Trigger: ATGCTTGAGCCCACTTGCCCAACTCCTAAGATCTCC...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCGGAGATCTTAGGAGTTaGGCAAGTGGGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGGDLRS*ASGLKH
Trigger: ATGCTTGAGCCCACTTGCCCAACTCCTAAGATCTCC...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCGAATGGCAAGCAAATTaGCTTAGTTTTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSEWQAN*LSFGKA
Trigger: TGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATTC...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCAGTGCGATTATTCTATaGCTGCCTTTTGGTGATCAA +
Preference number: 4 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSSAIIL*LPFGDQ
Trigger: TTGATCACCAAAAGGCAGCCATAGAATAATCGCACT...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATGATCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNDQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGATC...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACGCAGTAGGTCTTCGGTaGAATCAGAAAACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHAVGLR*NQKTGV
Trigger: AACACCAGTTTTCTGATTTCACCGAAGACCTACTGC...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR TCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAAGGACACACGCAGCTTTaGAGTTCTCAAAATCACGGA +
Preference number: 4 (lower is better)
Translates to: WQGNSAIILWLPFGDQKEGHTQL*SSQNHG
Trigger: TCCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCC...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAAGGACACACGCAGCTTTaGAGTTCTCAAAATCACGGA +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEGHTQL*SSQNHG
Trigger: TCCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCC...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp CAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QGKVYLFWALRILITGDQAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...CTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR TCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACACGAGGACGTTGCCACTaGTGTCGAATTCGGTGTATG +
Preference number: 4 (lower is better)
Translates to: TRHTKELEDTTPAHREFTRGRCH*CRIRCM
Trigger: CATACACCGAATTCGACATCAGTGGCAACGTCCTCG...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR TCA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIRSCLG*RSERGR
Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGTTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATTGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGATGGCTGCCTTTTGGTaGTCAAAAAGAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKMAAFW*SKRMRN
Trigger: GTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCAT...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGACTTTTTCCTCCACTTTaGTTTGTACTTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGLFPPL*FVLPFC
Trigger: GCAGAAGGGAAGTACAAATCAAAGTGGAGGAAAAAG...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR GCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTAAAGTTTGCTGCCGATaGCTCTTCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TFKQQGKVYLFWALRILIKVCCR*LFGSGN
Trigger: GTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTT...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCCACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTCACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TFKQQGKVYLFWALRILIHTKVC*RCLFGS
Trigger: AGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTG...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWASLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGATCTTCAACTCAGTaGTATCCAGGCCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHRSSTQ*YPGPNS
Trigger: TGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTCCTGCTCTAAAACTTaGCTCATTCTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITSCSKT*LILSLC
Trigger: GCAGAGGGAGAGAATGAGGCAAGTTTTAGAGCAGGA...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGAGAAGATACAACCCCTaGTCACAGAGAATTTACAAT +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLRRYNP*SQRIYN
Trigger: ATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAAC +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYLWFRF*VILIDN
Trigger: GTTATCAATGAGGATGACCCAGAACCTGAACCAGAG...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCGATTTTATTTTCCCATaGGACACACGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFDFIFP*DTRSFE
Trigger: TTCAAAGCTGCGTGTGTCCCATGGGAAAATAAAATC...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHSTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDLRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVELGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGGAATGGCAAGCAAATTaGCTTAGTTTTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKEWQAN*LSFGKA
Trigger: TGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATTC...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CAA 72 bp GGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTaGGTGATCAAAAAGAATGAGAAACTCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GRETVRLFYGCL*VIKKNEKLRDR
Trigger: CCTGTCTCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACACTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: TRHTKELEDTTPAHREFTLFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAGGACACACGCAGCTTTaGAGTTCTCAAAATCACGGA +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIGHTQL*SSQNHG
Trigger: TCCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCC...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGATTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCTGGACAGGAAGAGGATaGGCAGTAGCATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: NIFSILIHLVRHRNLTVIWTGRG*AVACPG
Trigger: ACCTGGGCATGCTACTGCTCATCCTCTTCCTGTCCA...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR TCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCGACCAGCCCAGGGTTTaGAAGCTGTCTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLDQPRV*KLSQDL
Trigger: AAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTC...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGCAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATTCATTGGAAGACAAATaGGCAGACTGTGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENSLEDK*ADCERT
Trigger: TGTTCTCTCACAGTCTGCTCATTTGTCTTCCAATGA...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAGTTTAACTAGTATATaGCCTTCCTCCAGGAACGCT +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIASLTSI*PSSRNA
Trigger: AGCGTTCCTGGAGGAAGGTCATATACTAGTTAAACT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAGAGGGGACTTGGATCTaGATCCAGATAACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKEGTWI*IQITVA
Trigger: TGCTACAGTTATCTGGATTCAGATCCAAGTCCCCTC...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS-3UTR TCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACAGAGTTGTCTTTGTGTaGCAGAAGCAAGACGGTTTT +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDRVVFV*QKQDGF
Trigger: AAAACCGTCTTGCTTCTGTCACACAAAGACAACTCT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486417.5
CDS-3UTR GCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNQHTKV*CRCLFG
Trigger: GCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKVRILL*KFLGSL
Trigger: AAGCGATCCCAGGAATTTGCACAGCAAGATCCTGAC...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTCTATTAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: PAWEIVLQGLSNDFKHSIKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...AATAGAATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR GCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCAGCTTGGGAAATCGTaGTCCAGGGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNQLGKS*SRVSPM
Trigger: CATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAGCTGCTCGTGCAGCTaGCATTTTCTTGTTTCGCAT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLSCSCS*HFLVSH
Trigger: ATGCGAAACAAGAAAATGGCAGCTGCACGAGCAGCT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACTGGCAGGGAAACAGTaGGATTATTCTATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRLAGKQ*DYSMAA
Trigger: GGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATAACAGTGATCTTTCATaGCCTGAAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENNSDLS*PEIPAT
Trigger: AGTAGCTGGGATTTCAGGCCATGAAAGATCACTGTT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATGTCAGAAGGTCTCAGTaGCTGGCTAGTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDVRRSQ*LASLER
Trigger: CCTCTCCAAACTAGCCAGCCACTGAGACCTTCTGAC...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATTTTTGGGTGACATCCTaGGGGTGTCCTGTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNFWVTS*GCPVRR
Trigger: CCTTCTGACAGGACACCCCCAGGATGTCACCCAAAA...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITCFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACTTCTCCATCTTCCATaGTTTGCATTTGACAGTAGC +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIALLHLP*FAFDSS
Trigger: GCTACTGTCAAATGCAAACCATGGAAGATGGAGAAG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLTPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYAIQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQIQIMP*LKIRAR
Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CCA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCCTTCGCCATCCAGCTTaGGAAATCGTGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NIFSILIHLVRHRNLTVILRHPA*EIVLQG
Trigger: ACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAG...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLQDTYY*RPAAAA
Trigger: AGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCGTCAACTGCAGGGAATaGCAAGCAAATTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGVNCRE*QANWLS
Trigger: ACTAAGCCAATTTGCTTGCCATTCCCTGCAGTTGAC...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
3UTR CAA 72 bp ATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTaGATGCAGACCTGTATGGATTCACCACTGATAACA +
Preference number: 4 (lower is better)
Translates to: ILPSKEARIVSS*MQTCMDSPLIT
Trigger: TGTTATCAGTGGTGAATCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCTCTTCCTCTTCACTTaGGCTTTCCTCAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNLFLFT*AFLSLV
Trigger: GACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITTEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSTEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAAATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: WQGNSAIILWLPFGDQKEIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAAGGAGAGCGGCAACCTaGAATTCATCCATCCAATTG +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRRRAAT*NSSIQL
Trigger: CAATTGGATGGATGAATTTCAGGTTGCCGCTCTCCT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIAISKR*EDGSLL
Trigger: TAGAAGACTACCATCCTCTCATCGCTTTGAAATGGC...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACTTGATCTGGAAGCTTTaGAGACCCTGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDLIWKL*RPWPQE
Trigger: TTCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAA...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTCAAATGAGCAGACTGTaGGAGAACAACAGTCATTTA +
Preference number: 4 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFQMSRL*ENNSHL
Trigger: TAAATGACTGTTGTTCTCTCACAGTCTGCTCATTTG...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCAGTTTAACTAGTATATaGCCTTCCTCCAGGAACGCT +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGSLTSI*PSSRNA
Trigger: AGCGTTCCTGGAGGAAGGTCATATACTAGTTAAACT...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACATGGCTGCCTTTTGGTaGTCAAAAAGAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHMAAFW*SKRMRN
Trigger: GTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCAT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTGAATGGAAGTCAATCTaGAAAAGACAACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIEWKSI*KRQPEE
Trigger: TTCCTCTGGTTGTCTTTTTCAGATTGACTTCCATTC...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGGGTGTCAGGATCTTaGTGTGCAAATTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLRVSGS*CANSWD
Trigger: ATCCCAGGAATTTGCACAGCAAGATCCTGACACCCT...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKLELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATATTGGAACTCTCAATTTaGCCACTTGGCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHILELSI*PLGSLP
Trigger: TGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDGPFPL*SQALSS
Trigger: CGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTTGCTGTGCAAATTCCTaGGATCGCTTCACAGCCCAA +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLCCANS*DRFTAQ
Trigger: TTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCA...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAAAGGATATTGATGCCTaGGAGGCTGGGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRKDIDA*EAGSKE
Trigger: TTCTTTGCTCCCAGCCTCCCAGGCATCAATATCCTT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLSTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAAGCACTGGAAGTACATaGATGTATGGAGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYASTGST*MYGVEG
Trigger: TCCTTCGACTCCATACATCCATGTACTTCCAGTGCT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCTTAGGAATATATTTGTaGGGCGCGTGGTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLLGIYL*GAWLGR
Trigger: TCTCCCCAACCACGCGCCCCACAAATATATTCCTAA...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATGGAGATCTTAGGAGTTaGGCAAGTGGGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNGDLRS*ASGLKH
Trigger: ATGCTTGAGCCCACTTGCCCAACTCCTAAGATCTCC...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTGTCAACTGCAGGGAATaGCAAGCAAATTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIVNCRE*QANWLS
Trigger: ACTAAGCCAATTTGCTTGCCATTCCCTGCAGTTGAC...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDQDTYY*RPAAAA
Trigger: TGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651183.1
3UTR CAA 72 bp AGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTaGCCCACTTGGCTCTCTTCCAAGTATATTTTATTT +
Preference number: 4 (lower is better)
Translates to: RSKLNRALGTLN*PTWLSSKYILF
Trigger: AAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQTEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHITEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAGAAACCTCAGGAATCTaGTCAAGTGGACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKETSGI*SSGRFL
Trigger: AAGAAAACGTCCACTTGATCAGATTCCTGAGGTTTC...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAACCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTCATTGGAAGACAAATaGGCAGACTGTGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLSLEDK*ADCERT
Trigger: TGTTCTCTCACAGTCTGCTCATTTGTCTTCCAATGA...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCATGGCTGCCTTTTGGTaGTCAAAAAGAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGMAAFW*SKRMRN
Trigger: GTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCAT...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAATCACGGAGGAATTTTaGCCATTTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKITEEF*PFLGHH
Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGTGAT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIASTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATAGCACCAGCAATAATTaGAAAACCTCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNSTSNN*KTSQNM
Trigger: CATGTTTTGTGAGGTTTTGCAATTATTGCTGGTGCT...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR GCA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTCGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFRLFYG*LLVIKK
Trigger: CTTTTTGATCACCAAAAGGCAGCCATAGAATAATCG...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTAGAAGATACAACCCCTaGTCACAGAGAATTTACAAT +
Preference number: 4 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIRRYNP*SQRIYN
Trigger: ATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCT...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAAACAGTGATCTTTCATaGCCTGAAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHINSDLS*PEIPAT
Trigger: AGTAGCTGGGATTTCAGGCCATGAAAGATCACTGTT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACATGTTTCTTCATCCTCTaGTTCAGGTTCTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TRHTKELEDTTPAHREFTCFFIL*FRFWVI
Trigger: GATGACCCAGAACCTGAACCAGAGGATGAAGAAACA...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCGATTTTATTTTCCCATaGGACACACGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSDFIFP*DTRSFE
Trigger: TTCAAAGCTGCGTGTGTCCCATGGGAAAATAAAATC...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACACCCCAGAGGTACTCTaGCAACATGATGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDTPEVL*QHDEAK
Trigger: TTTAGCCTCATCATGTTGCCAGAGTACCTCTGGGGT...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYATVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCGAATGGCAAGCAAATTaGCTTAGTTTTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGEWQAN*LSFGKA
Trigger: TGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATTC...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTAGTGCGATTATTCTATaGCTGCCTTTTGGTGATCAA +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITSAIIL*LPFGDQ
Trigger: TTGATCACCAAAAGGCAGCCATAGAATAATCGCACT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCAGGAGAGCGGCAACCTaGAATTCATCCATCCAATTG +
Preference number: 4 (lower is better)
Translates to: NIFSILIHLVRHRNLTVIRRAAT*NSSIQL
Trigger: CAATTGGATGGATGAATTTCAGGTTGCCGCTCTCCT...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGATTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR TCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGTTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAGAGAACGGAATATTGTaGCAAACCATTGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKENGIL*QTIEVV
Trigger: TACGACTTCAATGGTTTGGCACAATATTCCGTTCTC...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYAKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: CCSGRTDDALIGQHDLENWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCCTTCTCCATCTTCCATaGTTTGCATTTGACAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLLLHLP*FAFDSS
Trigger: GCTACTGTCAAATGCAAACCATGGAAGATGGAGAAG...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CCA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000644967.1
ENST00000645208.2
CDS-3UTR CCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATACCACAATCAAAAGATaGTGGGAGGGACACGATCAT +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDTTIKR*WEGHDH
Trigger: ATGATCGTGTCCCTCCCACCATCTTTTGATTGTGGT...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATGTCAACTGCAGGGAATaGCAAGCAAATTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDVNCRE*QANWLS
Trigger: ACTAAGCCAATTTGCTTGCCATTCCCTGCAGTTGAC...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCCACTTTTTGGGGCAATaGTTCCTAAATTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLHFLGQ*FLNFSN
Trigger: GTTGCTGAAATTTAGGAATCATTGCCCCAAAAAGTG...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR TCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTACTGAGGAGCCAAACTaGCTTTCAATAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLTEEPN*LSIALI
Trigger: AATCAAGGCTATTGAAAGTCAGTTTGGCTCCTCAGT...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATATTGTGCCAAACCATTaGAGTCGTACAACACACCAA +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNIVPNH*SRTTHQ
Trigger: TTGGTGTGTTGTACGACTTCAATGGTTTGGCACAAT...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATTTTTGGTCATTGCTTTaGGGACAACCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDFWSLL*GQPESC
Trigger: ACAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAA...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATATGCATTGTAGGCCTTaGTCATATTGGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNMHCRP*SYWLPK
Trigger: TTTGGGAAGCCAATATGATCAAGGCCTACAATGCAT...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACATTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRHTKELEDTTPAHREFTFSSSF*DPDSLP
Trigger: AGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAA...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAGAATGGAAGTCAATCTaGAAAAGACAACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLREWKSI*KRQPEE
Trigger: TTCCTCTGGTTGTCTTTTTCAGATTGACTTCCATTC...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAACATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TDDALIGQHDLENPSRVEHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAAAGAAGAGCAAAAATaGGTCCCAGTAGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLKEEQK*VPVAIS
Trigger: TGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTT...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKRLFYG*LLVIKK
Trigger: CTTTTTGATCACCAAAAGGCAGCCATAGAATAATCG...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR GCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGCGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLRLFYG*LLVIKK
Trigger: CTTTTTGATCACCAAAAGGCAGCCATAGAATAATCG...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCACGATTATTCTATGGCTaGCTTTTGGTGATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYARLFYG*LLVIKK
Trigger: CTTTTTGATCACCAAAAGGCAGCCATAGAATAATCG...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACAAGAAAGATTTTGTACTTCCCTTCTaGAGCTCCTTAAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: VRRYNPCSQRIYNKDKKDFVLPF*SSLSIH
Trigger: GTGAATGCTTAAGGAGCTGCAGAAGGGAAGTACAAA...ATCTTTCTTGTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR CCA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTGATTTTATTTTCCCATaGGACACACGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: TFKQQGKVYLFWALRILIDFIFP*DTRSFE
Trigger: TTCAAAGCTGCGTGTGTCCCATGGGAAAATAAAATC...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CCA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CCA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGAAGTACATGGATGTATaGAGTCGAAGGATATTGATG +
Preference number: 4 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLKYMDV*SRRILM
Trigger: CATCAATATCCTTCGACTCCATACATCCATGTACTT...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTACAATCAAAAGATGGTaGGAGGGACACGATCATGTA +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLTIKRW*EGHDHV
Trigger: TACATGATCGTGTCCCTCCCACCATCTTTTGATTGT...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAAAGTGTACCTTTTCTaGGCTCTCAGGATACTTATT +
Preference number: 4 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLKVYLF*ALRILI
Trigger: AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATACAGTGCTTGTTCTCTaGGCGTTCACATATTGCATT +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNTVLVL*AFTYCI
Trigger: AATGCAATATGTGAACGCCCAGAGAACAAGCACTGT...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTAACAGTGATCTTTCATaGCCTGGAATTATAAAGGTA +
Preference number: 4 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITNSDLS*PGIIKV
Trigger: TACCTTTATAATTCCAGGCCATGAAAGATCACTGTT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS-3UTR TCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTGCTATTTTCAGAGAATaGTGCATTGTAGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLAIFRE*CIVGLD
Trigger: ATCAAGGCCTACAATGCATCATTCTCTGAAAATAGC...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR TCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTCCAGGGTCTCTCCAATaGCTTCAAACATTCTATTTT +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLPGSLQ*LQTFYF
Trigger: AAAATAGAATGTTTGAAGTCATTGGAGAGACCCTGG...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCACATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NGKQIGLVLERHTELSYAHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 4 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAAGTTTAGATTCTTGTTaGTCAGGTAGGACTGATGAT +
Preference number: 4 (lower is better)
Translates to: TRHTKELEDTTPAHREFTSLDSC*SGRTDD
Trigger: ATCATCAGTCCTACCTGAGCAACAAGAATCTAAACT...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATAGTGCGATTATTCTATaGCTGCCTTTTGGTGATCAA +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNSAIIL*LPFGDQ
Trigger: TTGATCACCAAAAGGCAGCCATAGAATAATCGCACT...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTCATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LELSICPLGSLPSIFYFLHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATTGGGCGTTCACATATTaGATTACTTTTAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: KASEGTECYYLKSIQTVNWAFTY*ITFKQQ
Trigger: TTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCA...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR GCA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCCATCATCATCTTAAATaGAAACCACCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NIFSILIHLVRHRNLTVIHHHLK*KPPFSF
Trigger: AAAGGAAAACGGTGGTTTGCATTTAAGATGATGATG...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS CCA 90 bp CCTTCCCTTCTGCAGCTCCTTAAGCATTCACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAGGCTCAAAGTTGCTGCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSLLQLLKHSPDHST*TVPSPQAQSCCPQQ
Trigger: CTGCTGGGGGCAGCAACTTTGAGCCTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGGTGAATGCTTAAGGAGCTGCAGAAGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497073.1
CDS CCA 90 bp ACTTCCCTTCTGCAGCTCCTTAAGCATTCACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAGGCTCAAAGTTGCTGCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TSLLQLLKHSPDHST*TVPSPQAQSCCPQQ
Trigger: CTGCTGGGGGCAGCAACTTTGAGCCTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGGTGAATGCTTAAGGAGCTGCAGAAGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000646244.1
ENST00000650689.1
ENST00000651743.1
CDS-3UTR CAA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGCCTGGGAGGCGGAGGTaGCAGAGAGCCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKPGRRR*QRAEIA
Trigger: TGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAGG...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAACCCACAGGCTCAAAGTaGCTGCCCCCAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: TSPGFESCLKIFAIQLGKPTGSK*LPPAEI
Trigger: AATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGGG...TTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR CAA 90 bp ACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TFSGLSGYLLLATSSCSCWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...GCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLASSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS TCA 90 bp TCTATGGCTCTGCCCAAATCCCAGCCCCAACCAACCACTTGCCCTTaGAGTGGCAAGCCTACAGCAGAGTTGACAACCTGCAATCATGAG +
Preference number: 5 (lower is better)
Translates to: SMALPKSQPQPTTCP*SGKPTAELTTCNHE
Trigger: CTCATGATTGCAGGTTGTCAACTCTGCTGTAGGCTTGCCACTTCAAGGGCAAGTGGTTGGTTGGGGCTGGGATTTGGGCAGAGCCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS-3UTR CAA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATCCTGGGAGGCGGAGGTaGCAGAGAGCCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYPGRRR*QRAEIA
Trigger: TGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAGG...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: FSGLSGYLLLATSSCSCSTTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...CGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: TFLQERWMVRENVTSEQATTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RCLLALGSSIEIIDGQNHLASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...ATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTTTGTGGGGCGCGTGGTaGGGGAGACAGGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSLWGAW*GRQVEK
Trigger: TTTTTCTACCTGTCTCCCCAACCACGCGCCCCACAA...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR CAA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTCCTGGGAGGCGGAGGTaGCAGAGAGCCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITPGRRR*QRAEIA
Trigger: TGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAGG...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCCCTCTTCCTCTTCACTaGAGCTTTCCTCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: ESCLKIFAIQLGKSCSRVPLPLH*SFPQSR
Trigger: ACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAGG...GACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSTTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS CCA 90 bp CATTACCTCACTGTCGTTCACCGAAGAGCATTACCTAACTGCTTTTaGCCAGTCCGAGGAGGCACTTTCAATGAGGGTGATGGAGACGAC +
Preference number: 5 (lower is better)
Translates to: HYLTVVHRRALPNCF*PVRGGTFNEGDGDD
Trigger: GTCGTCTCCATCACCCTCATTGAAAGTGCCTCCTCGGACTGGCCAAAAGCAGTTAGGTAATGCTCTTCGGTGAACGACAGTGAGGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469455.1
CDS-3UTR CAA 90 bp ACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGTGAGCAGGCAGAAAGAAAGCACAGATaGCTGGGTTCTGCCCTCATA +
Preference number: 5 (lower is better)
Translates to: TFLQERWMVRENVTSEQAERKHR*LGSALI
Trigger: TATGAGGGCAGAACCCAGCAATCTGTGCTTTCTTTC...TGCCTGCTCACTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297784.10
CDS-3UTR CAA 90 bp TGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: CTFSGLSGYLLLATSSCSWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...GCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDTPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: SVPFLGSQDTYYWRPAAAIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...TGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 5 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTTCTTTTTGAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 5 (lower is better)
Translates to: LLFEIQIRCLLALGSSIEAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...CTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000645053.1
CDS-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTTGGAGCCCTGGAGAGTaGTCTTTGTGTGACAGAAGC +
Preference number: 5 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIWSPGE*SLCDRS
Trigger: GCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCA...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS GCA 90 bp TGTAGCCATTACCTCACTGTCGTTCACCGAAGAGCATTACCTAACTaGTTTTGGCCAGTCCGAGGAGGCACTTTCAATGAGGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: CSHYLTVVHRRALPN*FWPVRGGTFNEGDG
Trigger: TCCATCACCCTCATTGAAAGTGCCTCCTCGGACTGGCCAAAAGCAGTTAGGTAATGCTCTTCGGTGAACGACAGTGAGGTAATGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469455.1
CDS-3UTR CAA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATCCCACAGGCTCAAAGTaGCTGCCCCCAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYPTGSK*LPPAEI
Trigger: AATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGGG...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGCCTCTTCCTCTTCACTaGAGCTTTCCTCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAPLPLH*SFPQSR
Trigger: ACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAGG...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCCCTCTTCCTCTTCACTaGAGCTTTCCTCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGPLPLH*SFPQSR
Trigger: ACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAGG...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: FSGLSGYLLLATSSCSCSNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...CGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: RCLLALGSSIEIIDGQNHGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...ATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKTTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGTGCAGCTTCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: GSQDTYYWRPAAAAARAASSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...AGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLSQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTCTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCILASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTCCTGGAGAGTTGTCTTaGTGTGACAGAAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIPGELS*CDRSKT
Trigger: CGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGG...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCCTGGGAGGCGGAGGTaGCAGAGAGCCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: KASEGTECYYLKSIQTVNPGRRR*QRAEIA
Trigger: TGCGATCTCGGCTCTCTGCAACCTCCGCCTCCCAGG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATGACCAGCCCAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGCTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: MTSPGFESCLKIFAIQLGLKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...CCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTGGGCTGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AGCTTTGAAGACCCTGGCCTCAGGAACATTGCAGCACATAACGGCCCAGCACTGATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: SFEDPGLRNIAAHNGPALISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...CAGTGCTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAGGGTCTTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCCTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGLASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000644967.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCCTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGLASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CLLALGSSIEIIDGQNHHFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...GTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp GGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGTGCAGCTTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: GSQDTYYWRPAAAAARAAFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...AGCTGCACGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACTTGTGGGGCGCGTGGTaGGGGAGACAGGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHLWGAW*GRQVEK
Trigger: TTTTTCTACCTGTCTCCCCAACCACGCGCCCCACAA...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTTTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: KAVSRSSPSSLGNRAPGSFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...AGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTTTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: PRSKLNRALGTLNLPTWLISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...GAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGGTTTGAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QGLKAVSRSSPSSLGNRASQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...AGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTCAAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGSQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGTPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITTPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSTPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp GCACAGCACTATACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: AQHYTRHTKELEDTTPAHIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...GTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGTATAGTGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTCTGGCCTCAGGAACATaGCAGCACATAACGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLLASGT*QHITAQ
Trigger: CTGGGCCGTTATGTGCTGCAATGTTCCTGAGGCCAG...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGATTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAAAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: ESCLKIFAIQLGKSCSRVIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...GACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 5 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS GCA 90 bp CAGCAGCTGCAGCATTTTCATCTTCTTTTTGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAA +
Preference number: 5 (lower is better)
Translates to: QQLQHFHLLFEIQIR*LLALGSSIEIIDGQ
Trigger: TTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAATGCTGCAGCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646619.1
ENST00000651183.1
CDS GCA 90 bp TTTACAGACGTTCCCCGGGTTGGTCCGCATTGCAGGTTATTTCTTTaGAACATACTAAGGTTCTTAACTGATCCCACCTTCCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: FTDVPRVGPHCRLFL*NILRFLTDPTFPLV
Trigger: TACCAGAGGGAAGGTGGGATCAGTTAAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTCCTCTTCCTCTTCACTaGAGCTTTCCTCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIPLPLH*SFPQSR
Trigger: ACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAGG...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACTGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGCTGCAGCTGCTCGATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: FSGLSGYLLLATSSCSCSIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...CGAGCAGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: CCSGRTDDALIGQHDLENKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGCCAAAACCATCACCAAAATAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LALGSSIEIIDGQNHHQNKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...ATTTTGGTGATGGTTTTGGCCATCTATTATCTCAATGCTACTGCCAAGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCATGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: NGKQIGLVLERHTELSYAWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTTCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: RHRNLTVIPWQDDGALESSNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...ACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATGGAGCCCTGGAGAGTTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: RHRNLTVIPWQDDGALESFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...ACTCTCCAGGGCTCCATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp ACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCAAATTGGCTTAGTTTaGGAAAGGCACACTGAGTTA +
Preference number: 5 (lower is better)
Translates to: TQVKAEQGTWNSQFAHLAQIGLV*ERHTEL
Trigger: TAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTG...AGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCTGGAGAGTTGTCTTaGTGTGACAGAAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: CCSGRTDDALIGQHDLENPGELS*CDRSKT
Trigger: CGTCTTGCTTCTGTCACACAAAGACAACTCTCCAGG...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486417.5
CDS-3UTR CAA 90 bp ACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGCAAGGCTGGAGCCCTGGAGAGTaGTCTTTGTGTGACAGAAGC +
Preference number: 5 (lower is better)
Translates to: TVLVLWAFTYCITFKQQGWSPGE*SLCDRS
Trigger: GCTTCTGTCACACAAAGACAACTCTCCAGGGCTCCA...GCCTTGCTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp AAGCTGTCTCAAGATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCAATATCTTTTCCATATaGATTCACCTAGTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: KLSQDLRHPAWEIVLQGLNIFSI*IHLVRH
Trigger: GTGCCTGACTAGGTGAATCAATATGGAAAAGATATT...GAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGATCTTGAGACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACTCTTTTTCCTCCACTTaGATTTGTACTTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: FAIQLGKSCSRVSPMTSNSFSST*ICTSLL
Trigger: CAGAAGGGAAGTACAAATCAAAGTGGAGGAAAAAGA...GTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGAAGAGTTTTTGGCTTCTaGTTCCTTTGCTCCACCCGT +
Preference number: 5 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGRVFGF*FLCSTR
Trigger: ACGGGTGGAGCAAAGGAACAAGAAGCCAAAAACTCT...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651183.1
CDS TCA 90 bp TCTTTCATGGCCTGGCATCATTATGAGGGCCACTTTTTGGGGCAATaGTTCCTAAATTTCAGCAACTCCTGGAGGGCTTGTGAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SFMAWHHYEGHFLGQ*FLNFSNSWRACERK
Trigger: CTTTCTTTCACAAGCCCTCCAGGAGTTGCTGAAATTTAGGAATCATTGCCCCAAAAAGTGGCCCTCATAATGATGCCAGGCCATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643676.1
CDS-3UTR CAA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTCCCACAGGCTCAAAGTaGCTGCCCCCAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: LELSICPLGSLPSIFYFLPTGSK*LPPAEI
Trigger: AATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGGG...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATCCCACAGGCTCAAAGTaGCTGCCCCCAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: KASEGTECYYLKSIQTVNPTGSK*LPPAEI
Trigger: AATCTCTGCTGGGGGCAGCAACTTTGAGCCTGTGGG...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAGAAACTCAGAGACAGGATAATAGAAATCAGTAAGTCAACTGCAGGGAATGGCTGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EKLRDRIIEISKSTAGNGWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...GCCATTCCCTGCAGTTGACTTACTGATTTCTATTATCCTGTCTCTGAGTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCTGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTTCTGGGTCATCCTCATaGATAACATCTCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: QGTWNSQFAHLALFQVYFSGSSS*ITSLVR
Trigger: ACGGACCAGAGATGTTATCAATGAGGATGACCCAGA...AAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGGGCTCCATCTTCCATGGTTaGCATTTGACAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: QTPEPCQCIETQVKAEQGSIFHG*HLTVAI
Trigger: AATTGCTACTGTCAAATGCAAACCATGGAAGATGGA...GCCCTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CAA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQTTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATTATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: EIQIRCLLALGSSIEIIDYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...ATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGAAAGAGAACGGAATATaGTGCCAAACCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAKENGI*CQTIEV
Trigger: GACTTCAATGGTTTGGCACAATATTCCGTTCTCTTT...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTGGCGACCAGCAGAAAGAGAACGGAATATaGTGCCAAACCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GKVYLFWALRILITGDQQKENGI*CQTIEV
Trigger: GACTTCAATGGTTTGGCACAATATTCCGTTCTCTTT...CTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp CTCATTCTCTCCCTCTGCCATAAACCTACTTCTGCCCCTCAGCTGAATTCTTCCTCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: LILSLCHKPTSAPQLNSSSSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...GGAAGAATTCAGCTGAGGGGCAGAAGTAGGTTTATGGCAGAGGGAGAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGAATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLSQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQIRART*PLMSNS
Trigger: CGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATACAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCTGGAGTCGAAGGATATaGATGCCTGGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLWSRRI*MPGRLG
Trigger: TCCCAGCCTCCCAGGCATCAATATCCTTCGACTCCA...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WQGNSAIILWLPFGDQKEFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...TTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATCTTCGCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCATCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: IFAIQLGKSCSRVSPMTSSNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...TGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACTCTTCGCCATCCAGCTaGGGAAATCGTGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDSSPSS*GNRAPG
Trigger: CCCTGGAGCACGATTTCCCAAGCTGGATGGCGAAGA...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNIIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGATTGTGGGGCGCGTGGTaGGGGAGACAGGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRLWGAW*GRQVEK
Trigger: TTTTTCTACCTGTCTCCCCAACCACGCGCCCCACAA...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCTTGTGGGGCGCGTGGTaGGGGAGACAGGTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLLWGAW*GRQVEK
Trigger: TTTTTCTACCTGTCTCCCCAACCACGCGCCCCACAA...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ENSSSTVLVLWAFTYCITVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...AGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKMSGDH*VMVRWW
Trigger: CCACCACCTGACCATCACCAAATGGTCACCTGACAT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIMSGDH*VMVRWW
Trigger: CCACCACCTGACCATCACCAAATGGTCACCTGACAT...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCCCATGGCAGGACGATTTCCTCCACTTTGATTaGTACTTCCCTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LIHLVRHRNLTVIPWQDDFLHFD*YFPSAA
Trigger: AGCTGCAGAAGGGAAGTACAAATCAAAGTGGAGGAA...ATCGTCCTGCCATGGGATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR CAA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGTCTTTTTCCTCCACTTaGATTTGTACTTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLSFSST*ICTSLL
Trigger: CAGAAGGGAAGTACAAATCAAAGTGGAGGAAAAAGA...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTTTGATTTGTACTTTTTaGGGTGACATCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCILICTF*GDILGV
Trigger: CACCCCCAGGATGTCACCCAAAAAAGTACAAATCAA...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLWSVSS*VSSSLF
Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GAAACCCAGGTCAAAGCTGAACAGGGCACTTGGAACTCTCAATTTGCCCACTTGATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: ETQVKAEQGTWNSQFAHLIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...CAAGTGGGCAAATTGAGAGTTCCAAGTGCCCTGTTCAGCTTTGACCTGGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAACAACACACCAAAGTTaGCTGCCGATGCCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRTTHQS*LPMPLR
Trigger: CCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGT...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTAGTATATGACCTTCCTCCAGGAACGCTGGATGGTAAGGGAAAACGTCACAAGAAAGAGAACGGAATATaGTGCCAAACCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: LVYDLPPGTLDGKGKRHKKENGI*CQTIEV
Trigger: GACTTCAATGGTTTGGCACAATATTCCGTTCTCTTT...CTTGTGACGTTTTCCCTTACCATCCAGCGTTCCTGGAGGAAGGTCATATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATAAAGTTTAGAACTGGCAGGGAAACAGTGCGATTATTCTATGGCTGCCTTTTGAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: IKFRTGRETVRLFYGCLLKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...CAAAAGGCAGCCATAGAATAATCGCACTGTTTCCCTGCCAGTTCTAAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: KASEGTECYYLKSIQTVNTPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp ATCTTAGGAGTTGGGCAAGTGGGCTCAAGCATGCCCACTAAGCAAAATGGCAGATCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: ILGVGQVGSSMPTKQNGRSNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...TCTGCCATTTTGCTTAGTGGGCATGCTTGAGCCCACTTGCCCAACTCCTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CCATCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: PSRVEQENSSSTVLVLWAFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...CGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGAGCAGTTCCACAGTGCTaGTTCTCTGGGCGTTCACAT +
Preference number: 5 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRAVPQC*FSGRSH
Trigger: ATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGC...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGGTTTTAGGAATATATTaGTGGGGCGCGTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLVLGIY*WGAWLG
Trigger: CCCCAACCACGCGCCCCACAAATATATTCCTAAAAC...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GCCATCCAGCTTGGGAAATCGTGCTCCAGGGTCTCTCCAATGACTTCAAACATTAATATCTTTTCCATATaGATTCACCTAGTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: AIQLGKSCSRVSPMTSNINIFSI*IHLVRH
Trigger: GTGCCTGACTAGGTGAATCAATATGGAAAAGATATT...AATGTTTGAAGTCATTGGAGAGACCCTGGAGCACGATTTCCCAAGCTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTTCCTCCACTTTGATTaGTACTTCCCTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYFLHFD*YFPSAA
Trigger: AGCTGCAGAAGGGAAGTACAAATCAAAGTGGAGGAA...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645053.1
CDS TCA 90 bp AAACCGAGGTCTATCTGTTCCACTGCACCACGCAGACTAAAACAGTaGTCTTTCATGGCCTGGAATTATAAAGGTAGAAGTGGTTGTGAT +
Preference number: 5 (lower is better)
Translates to: KPRSICSTAPRRLKQ*SFMAWNYKGRSGCD
Trigger: ATCACAACCACTTCTACCTTTATAATTCCAGGCCATGAAAGATCACTGTTTTAGTCTGCGTGGTGCAGTGGAACAGATAGACCTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS-3UTR CAA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGTCTGGGTCATCCTCATaGATAACATCTCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQSGSSS*ITSLVR
Trigger: ACGGACCAGAGATGTTATCAATGAGGATGACCCAGA...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATATCTGGGTCATCCTCATaGATAACATCTCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHISGSSS*ITSLVR
Trigger: ACGGACCAGAGATGTTATCAATGAGGATGACCCAGA...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATTATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: CCSGRTDDALIGQHDLENYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATTTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: CCSGRTDDALIGQHDLENFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTTTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGTATGGATCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: SSLQGGKNCIEFDADLYGSSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...TCCATACAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCACTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIALKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATCTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYLKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCACTCCTGTCCCACCATaGTTTCCCAGCAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: NIFSILIHLVRHRNLTVITPVPP*FPSKVL
Trigger: GAGGACCTTGCTGGGAAACAATGGTGGGACAGGAGT...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDQIMPW*KIRART
Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTTTTGATCTGGAAGCTTaGAAGACCCTGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TFKQQGKVYLFWALRILIFDLEA*KTLASG
Trigger: TCCTGAGGCCAGGGTCTTCAAAGCTTCCAGATCAAA...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486417.5
ENST00000644967.1
CDS-3UTR CAA 90 bp TCAAGGGTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCTCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: SRVEQENSSSTVLVLWAFSNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...GAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTACCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ATGCAAACTCCAGAACCATGCCAGTGTATAGAAACCCAGGTCAAAGCTGAACAGATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: MQTPEPCQCIETQVKAEQIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...CTGTTCAGCTTTGACCTGGGTTTCTATACACTGGCATGGTTCTGGAGTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACATGTCAGGTGACCATTaGGTGATGGTCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDMSGDH*VMVRWW
Trigger: CCACCACCTGACCATCACCAAATGGTCACCTGACAT...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGAATTCTTCCCTCCAAGGAGGCAAGAATTGTATCGAGTTTGATGCAGACCTGAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTG +
Preference number: 5 (lower is better)
Translates to: LNSSLQGGKNCIEFDADLKGVIR*RMEVNL
Trigger: CAGATTGACTTCCATTCTCAATCTTATCACTCCCTT...CAGGTCTGCATCAAACTCGATACAATTCTTGCCTCCTTGGAGGGAAGAATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATCATTTGGAGGGGACTaGGATCTGAATCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: TDDALIGQHDLENPSRVESFGGD*DLNPDN
Trigger: GTTATCTGGATTCAGATCCAAGTCCCCTCCAAATGA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS GCA 90 bp AGAATTGTCATCATTTTTACAGACGTTCCCCGGGTTGGTCCGCATTaGAGGTTATTTCTTTGCAACATACTAAGGTTCTTAACTGATCCC +
Preference number: 5 (lower is better)
Translates to: RIVIIFTDVPRVGPH*RLFLCNILRFLTDP
Trigger: GGGATCAGTTAAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAAAATGATGACAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS-3UTR CAA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTTGATTTGTACTTTTTaGGGTGACATCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GTWNSQFAHLALFQVYFILICTF*GDILGV
Trigger: CACCCCCAGGATGTCACCCAAAAAAGTACAAATCAA...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACCCTCTTCCTCTTCACTaGAGCTTTCCTCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDPLPLH*SFPQSR
Trigger: ACGAGACTGAGGAAAGCTCAAGTGAAGAGGAAGAGG...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTTCTGGGTCATCCTCATaGATAACATCTCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: TFKQQGKVYLFWALRILISGSSS*ITSLVR
Trigger: ACGGACCAGAGATGTTATCAATGAGGATGACCCAGA...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATCCATCTTCCATGGTTaGCATTTGACAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIASIFHG*HLTVAI
Trigger: AATTGCTACTGTCAAATGCAAACCATGGAAGATGGA...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CAA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAAAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAGAATCACGGAGGAATTTaGCCCATTTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: SSTVLVLWAFTYCITFKQNHGGI*PISWPS
Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGTGATT...CTGTTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTGGGACACACGCAGCTTaGAAGTTCTCAAAATCACGG +
Preference number: 5 (lower is better)
Translates to: LELSICPLGSLPSIFYFLGTHAA*KFSKSR
Trigger: CCGTGATTTTGAGAACTTCAAAGCTGCGTGTGTCCC...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: TDDALIGQHDLENPSRVEYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCAAAAGAGAACGGAATATaGTGCCAAACCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: NRKIAVPQCLFSGRSHIAKENGI*CQTIEV
Trigger: GACTTCAATGGTTTGGCACAATATTCCGTTCTCTTT...TGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCTTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GTAGAACAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: VEQENSSSTVLVLWAFTYISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...ATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTGTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp TGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: CCSGRTDDALIGQHDLENISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...ATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACATAAGTCAAACAATGTaGGACAGAACATCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDISQTM*DRTSLG
Trigger: TCCTAGGGATGTTCTGTCCAACATTGTTTGACTTAT...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKSQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp CAGGAAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: QENSSSTVLVLWAFTYCIIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...AATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS TCA 90 bp ATAAAGGTAGAAGTGGTTGTGATTCATTTGGAGGGGACTTGGATCTaGATCCAGATAACTGTAGCACAGTTCTGCTGTAAACCAACTTTG +
Preference number: 5 (lower is better)
Translates to: IKVEVVVIHLEGTWI*IQITVAQFCCKPTL
Trigger: CAAAGTTGGTTTACAGCAGAACTGTGCTACAGTTATCTGGATTCAGATCCAAGTCCCCTCCAAATGAATCACAACCACTTCTACCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS TCA 90 bp AGGCAGATAAATTTGCCTTGCTTCATCGCTTCATGGGCTACCTCATaGAAACAGTTTTTCCTTGCATTCTGTGCAGAGTATTTCAACAAG +
Preference number: 5 (lower is better)
Translates to: RQINLPCFIASWATS*KQFFLAFCAEYFNK
Trigger: CTTGTTGAAATACTCTGCACAGAATGCAAGGAAAAACTGTTTTCATGAGGTAGCCCATGAAGCGATGAAGCAAGGCAAATTTATCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS TCA 90 bp GTACAATCCCATTCCATACAATCCTGCGTGATTAAACATAGCATGTaGAAGGCCAGTACAATGCTAGGCACCAAAACGTGCTCAATATTT +
Preference number: 5 (lower is better)
Translates to: VQSHSIQSCVIKHSM*KASTMLGTKTCSIF
Trigger: AAATATTGAGCACGTTTTGGTGCCTAGCATTGTACTGGCCTTTCACATGCTATGTTTAATCACGCAGGATTGTATGGAATGGGATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497073.1
CDS-3UTR CAA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATTCTGGGTCATCCTCATaGATAACATCTCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: KASEGTECYYLKSIQTVNSGSSS*ITSLVR
Trigger: ACGGACCAGAGATGTTATCAATGAGGATGACCCAGA...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATCCATCTTCCATGGTTaGCATTTGACAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: TDDALIGQHDLENPSRVESIFHG*HLTVAI
Trigger: AATTGCTACTGTCAAATGCAAACCATGGAAGATGGA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
CDS-3UTR CAA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCATTTTTGGTCATTGCTTaGAGGACAACCAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: NGKQIGLVLERHTELSYAFLVIA*RTTRKL
Trigger: CAGCTTTCTGGTTGTCCTCAAAGCAATGACCAAAAA...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: TDDALIGQHDLENPSRVESSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGCTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLLKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTCTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: GTWNSQFAHLALFQVYFILKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AATATCTTTTCCATATTGATTCACCTAGTCAGGCACAGGAATTTAACAGTCATCAAGGGTGTCAGGATCTaGCTGTGCAAATTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: NIFSILIHLVRHRNLTVIKGVRI*LCKFLG
Trigger: TCCCAGGAATTTGCACAGCAAGATCCTGACACCCTT...GATGACTGTTAAATTCCTGTGCCTGACTAGGTGAATCAATATGGAAAAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644967.1
CDS-3UTR CAA 90 bp ACTTTTAAACAGCAAGGCAAAGTGTACCTTTTCTGGGCTCTCAGGATACTTATTTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TFKQQGKVYLFWALRILISQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...AATAAGTATCCTGAGAGCCCAGAAAAGGTACACTTTGCCTTGCTGTTTAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486417.5
ENST00000644967.1
ENST00000645053.1
CDS-3UTR CAA 90 bp TTAGATTCTTGTTGCTCAGGTAGGACTGATGATGCCTTAATTGGCCAGCATGACTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: LDSCCSGRTDDALIGQHDFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...GTCATGCTGGCCAATTAAGGCATCATCAGTCCTACCTGAGCAACAAGAATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS GCA 90 bp AAGAGACTACACATTGGGCATAGTGTACCCTGCTTAGGTGATAGGTaGACCAAAATCTCAGAAATCACCACTAAAGAACTTATTCATGTA +
Preference number: 5 (lower is better)
Translates to: KRLHIGHSVPCLGDR*TKISEITTKELIHV
Trigger: TACATGAATAAGTTCTTTAGTGGTGATTTCTGAGATTTTGGTGCACCTATCACCTAAGCAGGGTACACTATGCCCAATGTGTAGTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACTTGATTTGTACTTTTTaGGGTGACATCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDLICTF*GDILGV
Trigger: CACCCCCAGGATGTCACCCAAAAAAGTACAAATCAA...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000645208.2
CDS-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCTATTGTGCCAAACCATaGAAGTCGTACAACACACCA +
Preference number: 5 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLYCAKP*KSYNTP
Trigger: TGGTGTGTTGTACGACTTCAATGGTTTGGCACAATA...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GTAAGAGATCTTCAAGATCTTCAACTCAGTGCTATCCAGGCCCCAATTCATATAAAAGAGAACGGAATATaGTGCCAAACCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VRDLQDLQLSAIQAPIHIKENGI*CQTIEV
Trigger: GACTTCAATGGTTTGGCACAATATTCCGTTCTCTTT...TATATGAATTGGGGCCTGGATAGCACTGAGTTGAAGATCTTGAAGATCTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGTCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLSSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCATCACCAATGTTTTaGGTCATTGCTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: GTWNSQFAHLALFQVYFISSPMF*VIALRT
Trigger: TGTCCTCAAAGCAATGACCAAAAACATTGGTGATGA...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACTGAAATTGAAAGTGTaGTCATCTCCACCTCCATCA +
Preference number: 5 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRLKLKV*SSPPPS
Trigger: TGATGGAGGTGGAGATGACAACACTTTCAATTTCAG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AAGGCTAGTGAGGGCACTGAGTGTTACTACTTAAAGTCAATTCAAACTGTAAATTCCCAAAGGGTAATATaGGCCTTTACTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KASEGTECYYLKSIQTVNSQRVI*AFTSFS
Trigger: GGAGAAGCTAGTAAAGGCCAATATTACCCTTTGGGA...ATTTACAGTTTGAATTGACTTTAAGTAGTAACACTCAGTGCCCTCACTAGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTGATGATGCCTTAATTGGCCAGCATGACCTTGAAAATCCATCAAGGGTAGAATCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: TDDALIGQHDLENPSRVESNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...TTCTACCCTTGATGGATTTTCAAGGTCATGCTGGCCAATTAAGGCATCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645208.2
CDS-3UTR CAA 90 bp GCAGACCTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: ADLYGFTTDNMIIGRQMSFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...GCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAGGTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAACAAATTGGCTTAGTTTaGGAAAGGCACACTGAGTTA +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKQIGLV*ERHTEL
Trigger: TAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTG...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp AATGGCAAGCAAATTGGCTTAGTTTTGGAAAGGCACACTGAGTTAAGCTATGCAAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTG +
Preference number: 5 (lower is better)
Translates to: NGKQIGLVLERHTELSYAKGVIR*RMEVNL
Trigger: CAGATTGACTTCCATTCTCAATCTTATCACTCCCTT...TGCATAGCTTAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTGCTTGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GGCACTTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTG +
Preference number: 5 (lower is better)
Translates to: GTWNSQFAHLALFQVYFIKGVIR*RMEVNL
Trigger: CAGATTGACTTCCATTCTCAATCTTATCACTCCCTT...AATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS TCA 90 bp CTAAAAGAAGAGCAAAAATGCGTCCCAGTAGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTAATTCAGCAAATAAGTCAAACAATG +
Preference number: 5 (lower is better)
Translates to: LKEEQKCVPVAISKR*EDGSLLIQQISQTM
Trigger: CATTGTTTGACTTATTTGCTGAATTAGAAGACTACCATCCTCTCATCGCTTTGAAATGGCTACTGGGACGCATTTTTGCTCTTCTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS GCA 90 bp AAACCTCAGGAATCTGATCAAGTGGACGTTTTCTTCTACTTGGGCTaGTTTTTCTTCTGTGATAGCTTCCTTAAAGTTCATTGTGATAGA +
Preference number: 5 (lower is better)
Translates to: KPQESDQVDVFFYLG*FFFCDSFLKVHCDR
Trigger: TCTATCACAATGAACTTTAAGGAAGCTATCACAGAAGAAAAAGCAGCCCAAGTAGAAGAAAACGTCCACTTGATCAGATTCCTGAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS-3UTR CAA 90 bp AAAATAGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: KIAVPQCLFSGRSHIALLIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...AAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp CTGTATGGATTCACCACTGATAACATGATCATTGGAAGACAAATGAGCAGACTGATAAAGAGAACCATATaGACTCCATACATCCATCTC +
Preference number: 5 (lower is better)
Translates to: LYGFTTDNMIIGRQMSRLIKRTI*TPYIHL
Trigger: GAGATGGATGTATGGAGTCAATATGGTTCTCTTTAT...CAGTCTGCTCATTTGTCTTCCAATGATCATGTTATCAGTGGTGAATCCATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp ACTAGGCATACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: TRHTKELEDTTPAHREFTIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...TGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTATGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp AGCAGTTCCACAGTGCTTGTTCTCTGGGCGTTCACATATTGCATTACTTTTAAATTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: SSSTVLVLWAFTYCITFKFLFRI*FSKACI
Trigger: AATGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...TTTAAAAGTAATGCAATATGTGAACGCCCAGAGAACAAGCACTGTGGAACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000486417.5
ENST00000645053.1
ENST00000645208.2
CDS-3UTR CAA 90 bp ACAGTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCCAAATTGGCTTAGTTTaGGAAAGGCACACTGAGTTA +
Preference number: 5 (lower is better)
Translates to: TVRLFYGCLLVIKKNEKLQIGLV*ERHTEL
Trigger: TAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTG...GAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp GTGCGATTATTCTATGGCTGCCTTTTGGTGATCAAAAAGAATGAGAAACTCAGACAAATTGGCTTAGTTTaGGAAAGGCACACTGAGTTA +
Preference number: 5 (lower is better)
Translates to: VRLFYGCLLVIKKNEKLRQIGLV*ERHTEL
Trigger: TAACTCAGTGTGCCTTTCCAAAACTAAGCCAATTTG...TCTGAGTTTCTCATTCTTTTTGATCACCAAAAGGCAGCCATAGAATAATCGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS TCA 90 bp AAACCAAACATCATATGTTCTCACTCACAATTGGGAGCTAAATTATaGGGACACAAAGGCATAAGAATGTTACAATGGACTTTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: KPNIICSHSQLGAKL*GHKGIRMLQWTLGS
Trigger: ACTCCCCAAAGTCCATTGTAACATTCTTATGCCTTTGTGTCCTCATAATTTAGCTCCCAATTGTGAGTGAGAACATATGATGTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CCA 90 bp ATTACAATTAAGAATTGTCATCATTTTTACAGACGTTCCCCGGGTTaGTCCGCATTGCAGGTTATTTCTTTGCAACATACTAAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: ITIKNCHHFYRRSPG*SALQVISLQHTKVL
Trigger: AAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAAAATGATGACAATTCTTAATTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACATTTTCATCTTCTTTTaGAGATCCAGATTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDIFIFF*RSRFAA
Trigger: GGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAAT...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TTGGAACTCTCAATTTGCCCACTTGGCTCTCTTCCAAGTATATTTTATTTCCTTAAGGGAGTGATAAGATaGAGAATGGAAGTCAATCTG +
Preference number: 5 (lower is better)
Translates to: LELSICPLGSLPSIFYFLKGVIR*RMEVNL
Trigger: CAGATTGACTTCCATTCTCAATCTTATCACTCCCTT...AAGGAAATAAAATATACTTGGAAGAGAGCCAAGTGGGCAAATTGAGAGTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000645053.1
ENST00000645208.2
ENST00000651183.1
CDS-3UTR CAA 90 bp TACAAAAGAGTTAGAAGATACAACCCCTGCTCACAGAGAATTTACAATAAGGACTCAAACATTCTATTTTaGCCACTGAATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: YKRVRRYNPCSQRIYNKDSNILF*PLNGPQ
Trigger: TTGTGGTCCATTCAGTGGCAAAAATAGAATGTTTGA...GTCCTTATTGTAAATTCTCTGTGAGCAGGGGTTGTATCTTCTAACTCTTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297784.10
ENST00000645208.2
ENST00000651183.1
CDS TCA 72 bp CTGCCCAAATCCCAGCCCCAACCAACCACTTGCCCTTaGAGTGGCAAGCCTACAGCAGAGTTGACAACCTGC +
Preference number: 6 (lower is better)
Translates to: LPKSQPQPTTCP*SGKPTAELTTC
Trigger: GCAGGTTGTCAACTCTGCTGTAGGCTTGCCACTTCAAGGGCAAGTGGTTGGTTGGGGCTGGGATTTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CCA 72 bp CTGCAGCTCCTTAAGCATTCACCAGACCACTCCACGTaGACAGTTCCTTCCCCACAGGCTCAAAGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: LQLLKHSPDHST*TVPSPQAQSCC
Trigger: GCAGCAACTTTGAGCCTGTGGGGAAGGAACTGTCCACGTGGAGTGGTCTGGTGAATGCTTAAGGAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000497073.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000646244.1
ENST00000650689.1
ENST00000651743.1
CDS CAA 72 bp TCTGCCCAAATCCCAGCCCCAACCAACCACTTGCCCTaGAAGTGGCAAGCCTACAGCAGAGTTGACAACCTG +
Preference number: 6 (lower is better)
Translates to: SAQIPAPTNHLP*KWQAYSRVDNL
Trigger: CAGGTTGTCAACTCTGCTGTAGGCTTGCCACTTCAAGGGCAAGTGGTTGGTTGGGGCTGGGATTTGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 72 bp GGAGCAAAGAAGGAGCCCATCCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACGTTGCCACTGATGTCG +
Preference number: 6 (lower is better)
Translates to: GAKKEPIQIMPW*KIRARTLPLMS
Trigger: CGACATCAGTGGCAACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTGGATGGGCTCCTTCTTTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000469455.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000651183.1
CDS TCA 72 bp TGGCGACCAGCAGCTGCAGCATTTTCATCTTCTTTTTaGGATCCAGATTCGCTGCCTTCTGGCCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: WRPAAAAFSSSF*DPDSLPSGPWQ
Trigger: CTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAATGCTGCAGCTGCTGGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646619.1
ENST00000651183.1
CDS CCA 72 bp CAAATCCCAGCCCCAACCAACCACTTGCCCTTGAAGTaGCAAGCCTACAGCAGAGTTGACAACCTGCAATCA +
Preference number: 6 (lower is better)
Translates to: QIPAPTNHLPLK*QAYSRVDNLQS
Trigger: TGATTGCAGGTTGTCAACTCTGCTGTAGGCTTGCCACTTCAAGGGCAAGTGGTTGGTTGGGGCTGGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 72 bp AGTAAGTGCCCTGAGAGTTTTTGGCTTCTTGTTCCTTaGCTCCACCCGTCCCTGTGTGCTGAGGCACAACAG +
Preference number: 6 (lower is better)
Translates to: SKCPESFWLLVP*LHPSLCAEAQQ
Trigger: CTGTTGTGCCTCAGCACACAGGGACGGGTGGAGCAAAGGAACAAGAAGCCAAAAACTCTCAGGGCACTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CAA 90 bp GCTGAGCAATGGACTTGCCAGTTGACTTGTTCTGTCCCAACTTTTTaGGGTGACATCCTGGGGGTGTCCTGTCAGAAGGTCTCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: AEQWTCQLTCSVPTF*GDILGVSCQKVSVA
Trigger: AGCCACTGAGACCTTCTGACAGGACACCCCCAGGATGTCACCCAAAAAAGTTGGGACAGAACAAGTCAACTGGCAAGTCCATTGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 90 bp AACAGTGATCTTTCATGGCCTGGTACCAACCTGACCCCTTCATTCTaGCTCCCTCTGACTCTCCTTCTCATACACCATGCTCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: NSDLSWPGTNLTPSF*LPLTLLLIHHAPAP
Trigger: TGGAGCTGGAGCATGGTGTATGAGAAGGAGAGTCAGAGGGAGCAAGAATGAAGGGGTCAGGTTGGTACCAGGCCATGAAAGATCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646244.1
CDS CAA 72 bp TGGACTTGCCAGTTGACTTGTTCTGTCCCAACTTTTTaGGGTGACATCCTGGGGGTGTCCTGTCAGAAGGTC +
Preference number: 6 (lower is better)
Translates to: WTCQLTCSVPTF*GDILGVSCQKV
Trigger: GACCTTCTGACAGGACACCCCCAGGATGTCACCCAAAAAAGTTGGGACAGAACAAGTCAACTGGCAAGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 72 bp CTTTCATGGCCTGGTACCAACCTGACCCCTTCATTCTaGCTCCCTCTGACTCTCCTTCTCATACACCATGCT +
Preference number: 6 (lower is better)
Translates to: LSWPGTNLTPSF*LPLTLLLIHHA
Trigger: AGCATGGTGTATGAGAAGGAGAGTCAGAGGGAGCAAGAATGAAGGGGTCAGGTTGGTACCAGGCCATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646244.1
CDS CAA 72 bp CATACACTTCTGTTGGTGGCATTACCTGTCCCACCATaGTTTCCCAGCAAGGTCCTCGAGGTACATCTGCAG +
Preference number: 6 (lower is better)
Translates to: HTLLLVALPVPP*FPSKVLEVHLQ
Trigger: CTGCAGATGTACCTCGAGGACCTTGCTGGGAAACAATGGTGGGACAGGTAATGCCACCAACAGAAGTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650689.1
CDS CAA 90 bp TTGCCTCCGCTCCTCTCTTTAGCCTCCTCCTCCTCTCTTTTTCTCTaGCCTTCCTTGTTTCTTCATCCTCTGGTTCAGGTTCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: LPPLLSLASSSSLFL*PSLFLHPLVQVLGH
Trigger: ATGACCCAGAACCTGAACCAGAGGATGAAGAAACAAGGAAGGCAAGAGAAAAAGAGAGGAGGAGGAGGCTAAAGAGAGGAGCGGAGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000644967.1
ENST00000645053.1
ENST00000645773.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS TCA 72 bp TGGCAAGCCTACAGCAGAGTTGACAACCTGCAATCATaGGATTTTAGGGCCTGTGCTACTTCCAGACTTGGC +
Preference number: 6 (lower is better)
Translates to: WQAYSRVDNLQS*DFRACATSRLG
Trigger: GCCAAGTCTGGAAGTAGCACAGGCCCTAAAATCTCATGATTGCAGGTTGTCAACTCTGCTGTAGGCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS GCA 72 bp CAAACCATTGAAGTCGTACAACACACCAAAGTTTGCTaGCGATGCCTCTTCGGCTCTGGGAACGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: QTIEVVQHTKVC*RCLFGSGNGFP
Trigger: AGGAAAACCGTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGTACGACTTCAATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS GCA 72 bp TGCCAAACCATTGAAGTCGTACAACACACCAAAGTTTaGTGCCGATGCCTCTTCGGCTCTGGGAACGGTTTT +
Preference number: 6 (lower is better)
Translates to: CQTIEVVQHTKV*CRCLFGSGNGF
Trigger: AAAACCGTTCCCAGAGCCGAAGAGGCATCGGCAGCAAACTTTGGTGTGTTGTACGACTTCAATGGTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS GCA 72 bp TTTTTCCCACCACCCAAGGGTGTCAGGATCTTGCTGTaGAAATTCCTGGGATCGCTTCACAGCCCAAAAGAT +
Preference number: 6 (lower is better)
Translates to: FFPPPKGVRILL*KFLGSLHSPKD
Trigger: ATCTTTTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCAAGATCCTGACACCCTTGGGTGGTGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS GCA 72 bp TACCTCACTGTCGTTCACCGAAGAGCATTACCTAACTaGTTTTGGCCAGTCCGAGGAGGCACTTTCAATGAG +
Preference number: 6 (lower is better)
Translates to: YLTVVHRRALPN*FWPVRGGTFNE
Trigger: CTCATTGAAAGTGCCTCCTCGGACTGGCCAAAAGCAGTTAGGTAATGCTCTTCGGTGAACGACAGTGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469455.1
CDS CCA 72 bp ACTGTCGTTCACCGAAGAGCATTACCTAACTGCTTTTaGCCAGTCCGAGGAGGCACTTTCAATGAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: TVVHRRALPNCF*PVRGGTFNEGD
Trigger: ATCACCCTCATTGAAAGTGCCTCCTCGGACTGGCCAAAAGCAGTTAGGTAATGCTCTTCGGTGAACGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469455.1
CDS CAA 72 bp ACAATCATAGTAAGTGCCCTGAGAGTTTTTGGCTTCTaGTTCCTTTGCTCCACCCGTCCCTGTGTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: TIIVSALRVFGF*FLCSTRPCVLR
Trigger: CCTCAGCACACAGGGACGGGTGGAGCAAAGGAACAAGAAGCCAAAAACTCTCAGGGCACTTACTATGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS TCA 72 bp GTGCAAATTCCTGGGATCGCTTCACAGCCCAAAAGATaGGGTATCCACTCCCTCCAAGTGTTAGAAACACGA +
Preference number: 6 (lower is better)
Translates to: VQIPGIASQPKR*GIHSLQVLETR
Trigger: TCGTGTTTCTAACACTTGGAGGGAGTGGATACCTCATCTTTTGGGCTGTGAAGCGATCCCAGGAATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS CAA 72 bp ATGCTCCAGCTCCATCGTGGGGGAAATAGGGGACGTTaGCTTATGTTATTTCCTGAAATCCCAGCTACTCAG +
Preference number: 6 (lower is better)
Translates to: MLQLHRGGNRGR*LMLFPEIPATQ
Trigger: CTGAGTAGCTGGGATTTCAGGAAATAACATAAGCAAACGTCCCCTATTTCCCCCACGATGGAGCTGGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646244.1
CDS CAA 90 bp CTTCTTCTGCTCCTCTCTTTAGCCTCCTCCTCCTCTCTTTTTCTCTaGCCTTCCTTGTTTCTTCATCCTCTGGTTCAGGTTCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: LLLLLSLASSSSLFL*PSLFLHPLVQVLGH
Trigger: ATGACCCAGAACCTGAACCAGAGGATGAAGAAACAAGGAAGGCAAGAGAAAAAGAGAGGAGGAGGAGGCTAAAGAGAGGAGCAGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
ENST00000645787.1
ENST00000646244.1
CDS CAA 90 bp CTCTTTTACACAATCATAGTAAGTGCCCTGAGAGTTTTTGGCTTCTaGTTCCTTTGCTCCACCCGTCCCTGTGTGCTGAGGCACAACAGT +
Preference number: 6 (lower is better)
Translates to: LFYTIIVSALRVFGF*FLCSTRPCVLRHNS
Trigger: ACTGTTGTGCCTCAGCACACAGGGACGGGTGGAGCAAAGGAACAAGAAGCCAAAAACTCTCAGGGCACTTACTATGATTGTGTAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS TCA 72 bp AAAGCACAGATTGCTGGGTTCTGCCCTCATAGTTTCTaGGGCAGTAGGTCTTCGGTGAAATCAGAAAACTGG +
Preference number: 6 (lower is better)
Translates to: KAQIAGFCPHSF*GSRSSVKSENW
Trigger: CCAGTTTTCTGATTTCACCGAAGACCTACTGCCTCAGAAACTATGAGGGCAGAACCCAGCAATCTGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000643676.1
CDS GCA 72 bp GTTCCCCGGGTTGGTCCGCATTGCAGGTTATTTCTTTaGAACATACTAAGGTTCTTAACTGATCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: VPRVGPHCRLFL*NILRFLTDPTF
Trigger: GAAGGTGGGATCAGTTAAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CAA 90 bp ACAACCTGCAATCATGAGATTTTAGGGCCTGTGCTACTTCCAGACTaGGCTAAAACATCACACCATGGAGTGTGGGATCTAGGATCTTAC +
Preference number: 6 (lower is better)
Translates to: TTCNHEILGPVLLPD*AKTSHHGVWDLGSY
Trigger: GTAAGATCCTAGATCCCACACTCCATGGTGTGATGTTTTAGCCAAGTCTGGAAGTAGCACAGGCCCTAAAATCTCATGATTGCAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS TCA 72 bp ATGATTCCTAAATTTCAGCAACTCCTGGAGGGCTTGTaGAAGAAAGCACAGATTGCTGGGTTCTGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: MIPKFQQLLEGL*KKAQIAGFCPH
Trigger: ATGAGGGCAGAACCCAGCAATCTGTGCTTTCTTTCACAAGCCCTCCAGGAGTTGCTGAAATTTAGGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297784.10
ENST00000643676.1
CDS CCA 72 bp TGCCTTCCTTGTTTCTTCATCCTCTGGTTCAGGTTCTaGGTCATCCTCATTGATAACATCTCTGGTCCGTTT +
Preference number: 6 (lower is better)
Translates to: CLPCFFILWFRF*VILIDNISGPF
Trigger: AAACGGACCAGAGATGTTATCAATGAGGATGACCCAGAACCTGAACCAGAGGATGAAGAAACAAGGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646244.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS TCA 72 bp TTTTCCTTGCATTCTGTGCAGAGTATTTCAACAAGCTaGGCAATGGACTTGCCAGTTGACTTGTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: FSLHSVQSISTS*AMDLPVDLFCP
Trigger: GGGACAGAACAAGTCAACTGGCAAGTCCATTGCTCAGCTTGTTGAAATACTCTGCACAGAATGCAAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS TCA 72 bp CATTCCATACAATCCTGCGTGATTAAACATAGCATGTaGAAGGCCAGTACAATGCTAGGCACCAAAACGTGC +
Preference number: 6 (lower is better)
Translates to: HSIQSCVIKHSM*KASTMLGTKTC
Trigger: GCACGTTTTGGTGCCTAGCATTGTACTGGCCTTTCACATGCTATGTTTAATCACGCAGGATTGTATGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497073.1
CDS GCA 72 bp AGGGATAAGAGACTACACATTGGGCATAGTGTACCCTaGTTAGGTGATAGGTGCACCAAAATCTCAGAAATC +
Preference number: 6 (lower is better)
Translates to: RDKRLHIGHSVP*LGDRCTKISEI
Trigger: GATTTCTGAGATTTTGGTGCACCTATCACCTAAGCAGGGTACACTATGCCCAATGTGTAGTCTCTTATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CCA 72 bp AGTGTACCTTTTCTGGGCTCTCAGGATACTTATTACTaGCGACCAGCAGCTGCAGCATTTTCATCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SVPFLGSQDTYY*RPAAAAFSSSF
Trigger: AAAAGAAGATGAAAATGCTGCAGCTGCTGGTCGCCAGTAATAAGTATCCTGAGAGCCCAGAAAAGGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646619.1
ENST00000651183.1
CDS CAA 72 bp AATCATGAGATTTTAGGGCCTGTGCTACTTCCAGACTaGGCTAAAACATCACACCATGGAGTGTGGGATCTA +
Preference number: 6 (lower is better)
Translates to: NHEILGPVLLPD*AKTSHHGVWDL
Trigger: TAGATCCCACACTCCATGGTGTGATGTTTTAGCCAAGTCTGGAAGTAGCACAGGCCCTAAAATCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 90 bp TCTTTTTGTATCAGACAGAGACATCATGCACATCATCAAATTCCCTaGAATGTTCCCTTTCTTTCTATGGCTCTGCCCAAATCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SFCIRQRHHAHHQIP*NVPFLSMALPKSQP
Trigger: GGGCTGGGATTTGGGCAGAGCCATAGAAAGAAAGGGAACATTCAAGGGAATTTGATGATGTGCATGATGTCTCTGTCTGATACAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS TCA 72 bp CAGGTTATTTCTTTGCAACATACTAAGGTTCTTAACTaGTCCCACCTTCCCTCTGGTAACTGTCTACTCCCT +
Preference number: 6 (lower is better)
Translates to: QVISLQHTKVLN*SHLPSGNCLLP
Trigger: AGGGAGTAGACAGTTACCAGAGGGAAGGTGGGATCAGTTAAGAACCTTAGTATGTTGCAAAGAAATAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS GCA 72 bp GTTGAGGATGACACAAGTATTTGTTCAGAATGTATCTaGCAAGATCTTTTTCCCTCTCGCCCTACCTCAAAC +
Preference number: 6 (lower is better)
Translates to: VEDDTSICSECI*QDLFPSRPTSN
Trigger: GTTTGAGGTAGGGCGAGAGGGAAAAAGATCTTGGCAGATACATTCTGAACAAATACTTGTGTCATCCTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497073.1
CDS GCA 72 bp CAGCATTTTCATCTTCTTTTTGAGATCCAGATTCGCTaGCTTCTGGCCCTTGGCAGTAGCATTGAGATAATA +
Preference number: 6 (lower is better)
Translates to: QHFHLLFEIQIR*LLALGSSIEII
Trigger: TATTATCTCAATGCTACTGCCAAGGGCCAGAAGGCAGCGAATCTGGATCTCAAAAAGAAGATGAAAATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646619.1
ENST00000651183.1
CDS GCA 72 bp CACATTGGGCATAGTGTACCCTGCTTAGGTGATAGGTaGACCAAAATCTCAGAAATCACCACTAAAGAACTT +
Preference number: 6 (lower is better)
Translates to: HIGHSVPCLGDR*TKISEITTKEL
Trigger: AAGTTCTTTAGTGGTGATTTCTGAGATTTTGGTGCACCTATCACCTAAGCAGGGTACACTATGCCCAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CAA 72 bp AAAGGTAGAAGTGGTTGTGATTCATTTGGAGGGGACTaGGATCTGAATCCAGATAACTGTAGCACAGTTCTG +
Preference number: 6 (lower is better)
Translates to: KGRSGCDSFGGD*DLNPDNCSTVL
Trigger: CAGAACTGTGCTACAGTTATCTGGATTCAGATCCAAGTCCCCTCCAAATGAATCACAACCACTTCTACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS CAA 72 bp CATCATTTTTACAGACGTTCCCCGGGTTGGTCCGCATaGCAGGTTATTTCTTTGCAACATACTAAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: HHFYRRSPGWSA*QVISLQHTKVL
Trigger: AAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAAAATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS TCA 72 bp GAGCAAAAATGCGTCCCAGTAGCCATTTCAAAGCGATaGGAGGATGGTAGTCTTCTAATTCAGCAAATAAGT +
Preference number: 6 (lower is better)
Translates to: EQKCVPVAISKR*EDGSLLIQQIS
Trigger: ACTTATTTGCTGAATTAGAAGACTACCATCCTCTCATCGCTTTGAAATGGCTACTGGGACGCATTTTTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000644967.1
ENST00000645053.1
ENST00000645208.2
ENST00000645773.1
ENST00000645787.1
ENST00000646619.1
ENST00000650689.1
ENST00000651183.1
CDS TCA 72 bp TCTATCTGTTCCACTGCACCACGCAGACTAAAACAGTaGTCTTTCATGGCCTGGAATTATAAAGGTAGAAGT +
Preference number: 6 (lower is better)
Translates to: SICSTAPRRLKQ*SFMAWNYKGRS
Trigger: ACTTCTACCTTTATAATTCCAGGCCATGAAAGATCACTGTTTTAGTCTGCGTGGTGCAGTGGAACAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340019.4
CDS TCA 72 bp CTCATTCTGTACAATCCCATTCCATACAATCCTGCGTaGTTAAACATAGCATGTGAAAGGCCAGTACAATGC +
Preference number: 6 (lower is better)
Translates to: LILYNPIPYNPA*LNIACERPVQC
Trigger: GCATTGTACTGGCCTTTCACATGCTATGTTTAATCACGCAGGATTGTATGGAATGGGATTGTACAGAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497073.1
CDS GCA 72 bp ATCATTTTTACAGACGTTCCCCGGGTTGGTCCGCATTaGAGGTTATTTCTTTGCAACATACTAAGGTTCTTA +
Preference number: 6 (lower is better)
Translates to: IIFTDVPRVGPH*RLFLCNILRFL
Trigger: TAAGAACCTTAGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAAAATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CCA 72 bp AAGAATTGTCATCATTTTTACAGACGTTCCCCGGGTTaGTCCGCATTGCAGGTTATTTCTTTGCAACATACT +
Preference number: 6 (lower is better)
Translates to: KNCHHFYRRSPG*SALQVISLQHT
Trigger: AGTATGTTGCAAAGAAATAACCTGCAATGCGGACCAACCCGGGGAACGTCTGTAAAAATGATGACAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651743.1
CDS CAA 72 bp ATCAGACAGAGACATCATGCACATCATCAAATTCCCTaGAATGTTCCCTTTCTTTCTATGGCTCTGCCCAAA +
Preference number: 6 (lower is better)
Translates to: IRQRHHAHHQIP*NVPFLSMALPK
Trigger: TTTGGGCAGAGCCATAGAAAGAAAGGGAACATTCAAGGGAATTTGATGATGTGCATGATGTCTCTGTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492418.1
ENST00000651743.1
CDS CAA 90 bp TTTGCCTCCTTGAGAACTTCAATTTTCTTCTCCATCTTCCATGGTTaGCATTTGACAGTAGCAATTATTTGTCTTTTCTCATCTAACTCT +
Preference number: 6 (lower is better)
Translates to: FASLRTSIFFSIFHG*HLTVAIICLFSSNS
Trigger: AGAGTTAGATGAGAAAAGACAAATAATTGCTACTGTCAAATGCAAACCATGGAAGATGGAGAAGAAAATTGAAGTTCTCAAGGAGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297784.10
ENST00000340019.4
ENST00000645208.2
ENST00000645787.1
CDS TCA 72 bp ATCATATGTTCTCACTCACAATTGGGAGCTAAATTATaGGGACACAAAGGCATAAGAATGTTACAATGGACT +
Preference number: 6 (lower is better)
Translates to: IICSHSQLGAKL*GHKGIRMLQWT
Trigger: AGTCCATTGTAACATTCTTATGCCTTTGTGTCCTCATAATTTAGCTCCCAATTGTGAGTGAGAACATATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651743.1